HHsearch results for GI: 254780388 and protein with PDBid: 1n3y_A
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.38 E-value=2.1e-11 Score=89.76 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=99.3
Q ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 520121100677665565576812100566665641256-7777764588999998623666654444566777506999
Q gi|254780388|r 294 TVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDEN-EMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIV 372 (458)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~K~ii 372 (458)
..+.+...|+.......++... .+...+...+..+. ..|+|+...+|.++...+.....+ ..+...|++|
T Consensus 45 ~~rv~vv~f~~~~~~~~~l~~~---~~~~~~~~~i~~~~~~~~~t~~~~al~~a~~~~~~~~~~------~r~~~~kviv 115 (198)
T 1n3y_A 45 STQFSLMQFSNKFQTHFTFEEF---RRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYG------ARRDAAKILI 115 (198)
T ss_dssp TEEEEEEEESSSEEEEECHHHH---HHCSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGT------CCTTSEEEEE
T ss_pred CCEEEEEEEECCEEEECCCCCC---CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC------CCCCCCCEEE
T ss_conf 8589999983432341266664---338999998876540369873889999999998423205------7787642599
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHHH
Q ss_conf 99606688885408999999998796899999437887431178999860689---8378829989999999999875
Q gi|254780388|r 373 LLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCASP---NSFFEANSTHELNKIFRDRIGN 447 (458)
Q Consensus 373 l~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~---~~yy~a~~~~eL~~aF~~~i~~ 447 (458)
|+|||..+..........+.+|..||+||+||++...+... ...-|+.+|+. .++|.+.+.++|.+.++++..+
T Consensus 116 lltDG~~~~~~~~~~~~~~~~~~~gv~i~~Ig~g~~~~~~~-~~~~L~~ias~~~~~~~~~~~~~~~L~~i~~~l~~~ 192 (198)
T 1n3y_A 116 VITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRN-SWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEK 192 (198)
T ss_dssp EEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSST-THHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHH
T ss_pred EEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCC-CHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 99358988872059999999997898899999787667753-499999986699865199929999999999999987