HHsearch results for GI: 254780388 and protein with PDBid: 3ibs_A
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for structural genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=2.3e-12 Score=95.92 Aligned_cols=160 Identities=12% Similarity=0.234 Sum_probs=116.5
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 33066777665221123467756665201211006776655655768121005666656412567777764588999998
Q gi|254780388|r 269 KKKHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENEMGSTAINDAMQTAYD 348 (458)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~T~~~~gl~~g~~ 348 (458)
.|++..+..+..++.... ..+.+...|+.......+++...... ...+......+.+.|+|++..+|..+..
T Consensus 32 ~R~~~ak~~~~~~l~~~~-------~~rvglv~F~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~gT~~~~al~~a~~ 103 (218)
T 3ibs_A 32 SRLEKAKRLISRLVDELD-------NDKVGMIVFAGDAFTQLPITSDYISA-KMFLESISPSLISKQGTAIGEAINLATR 103 (218)
T ss_dssp CHHHHHHHHHHHHHHTCS-------SCEEEEEEESSSEEEEEEEESCHHHH-HHHHHTCCGGGCCSCSCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHCC-------CCEEEEEEECCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 899999999999995099-------97699999768442011243067788-8888752214566899637899999998
Q ss_pred HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC----------------
Q ss_conf 6236666544445667775069999960668888540899999999879689999943788743----------------
Q gi|254780388|r 349 TIISSNEDEVHRMKNNLEAKKYIVLLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQ---------------- 412 (458)
Q Consensus 349 ~Ls~~~~~~~~~~~~~~~~~K~iil~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~---------------- 412 (458)
.|.. .....|+|||+|||+++..+ ....-+.++..+|.+++++++......
T Consensus 104 ~l~~-----------~~~~~~~iillSDG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3ibs_A 104 SFTP-----------QEGVGRAIIVITDGENHEGG--AVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGN 170 (218)
T ss_dssp TSCS-----------CSSCCEEEEEEECCTTCCSC--HHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSC
T ss_pred HHHH-----------HCCCCCEEEEECCCCCCCCC--HHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCC
T ss_conf 7412-----------02677679996589988761--3899999987698799998626878621122677522146776
Q ss_pred ----CHHHHHHHHHC--CCCCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf ----11789998606--89837882998999999999987587
Q gi|254780388|r 413 ----EKARYFLSNCA--SPNSFFEANSTHELNKIFRDRIGNEI 449 (458)
Q Consensus 413 ----~~~~~~lk~CA--s~~~yy~a~~~~eL~~aF~~~i~~~~ 449 (458)
.....+|+..| +.|.||++.+.+++.++|.+.|.+.-
T Consensus 171 ~~~~~~d~~~L~~iA~~tgG~y~~~~~~~~~~~~i~~~I~~l~ 213 (218)
T 3ibs_A 171 VIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMA 213 (218)
T ss_dssp BCEECCCHHHHHHHHHHTEEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 2433269999999999649189995287999999999997542