HHSEARCH alignment of GI: 254780388 and SCOP domain: d1mf7a_

Alignment

Probab=99.31  E-value=1.4e-11  Score=89.51  Aligned_cols=144  Identities=17%  Similarity=0.167  Sum_probs=100.2

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             5201211006776655655768121005666656412567-777764588999998623666654444566777506999
Q gi|254780388|r  294 TVRMGATFFNDRVISDPSFSWGVHKLIRTIVKTFAIDENE-MGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIV  372 (458)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~T~~~~gl~~g~~~Ls~~~~~~~~~~~~~~~~~K~ii  372 (458)
                      ..+.+...|+.......++..   ..+...+...+..+.. +|+|....+|.++.+.+......      ..+...|++|
T Consensus        41 ~~rv~vv~fs~~~~~~~~l~~---~~~~~~~~~~i~~i~~~~~~t~~~~al~~~~~~~~~~~~~------~~~~~~kvvv  111 (194)
T d1mf7a_          41 KTLFSLMQYSEEFRIHFTFKE---FQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNG------ARKNAFKILV  111 (194)
T ss_dssp             TEEEEEEEESSSEEEEECHHH---HHHSCCHHHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGT------CCTTSEEEEE
T ss_pred             CCEEEEEEEECCCEEEEECCC---CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC------CCCCCCEEEE
T ss_conf             836999997224025775266---5778999999764555321015779999999998756425------7889735999


Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHHH
Q ss_conf             99606688885408999999998796899999437887431178999860689---8378829989999999999875
Q gi|254780388|r  373 LLTDGENTQDNEEGIAICNKAKSQGIRIMTIAFSVNKTQQEKARYFLSNCASP---NSFFEANSTHELNKIFRDRIGN  447 (458)
Q Consensus       373 l~TDG~n~~~~~~~~~~C~~~K~~gI~IytI~f~~~~~~~~~~~~~lk~CAs~---~~yy~a~~~~eL~~aF~~~i~~  447 (458)
                      ++|||..+............+|..||+||+||++...+. ......|+.+||.   .++|.+.+-++|.+.+.++..+
T Consensus       112 liTDG~~~~~~~~~~~~~~~~~~~gv~i~~VGi~~~~~~-~~~~~~L~~ias~~~~~~~~~~~~~~~L~~~~~~l~~~  188 (194)
T d1mf7a_         112 VITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRS-EKSRQELNTIASKPPRDHVFQVNNFEALKTIQNQLREK  188 (194)
T ss_dssp             EEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCS-HHHHHHHHHHSCSSHHHHEEEESSGGGGGGGHHHHHHH
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCC-CCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf             982689899805599999999985990599805776665-25699999996599877199959999999999999887

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: vWA-like
superfamily: vWA-like
family: Integrin A (or I) domain
domain: Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit)
species: Human (Homo sapiens) [TaxId: 9606]