RPSBLAST alignment of GI: 254780388 and protein with PDBid: 1pt6

>1pt6_A Integrin alpha-1; X-RAY diffraction, cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A Length = 213

 Score = 47.9 bits (113), Expect = 5e-06
 Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 22/199 (11%)

Query: 259 VDSSSLRHVIKKKHLVRDALASVIRSIKKIDNVNDTVRMGATFFNDRVISDPSFSWGVHK 318
           +D S+    I     V   L  ++   K++D      ++G   + + V  + + +     
Sbjct: 14  LDGSN---SIYPWDSVTAFLNDLL---KRMDIGPKQTQVGIVQYGENVTHEFNLNKYSST 67

Query: 319 LIRTIVKTFAIDENEMGSTAINDAMQTAYDTIISSNEDEVHRMKNNLEAKKYIVLLTDGE 378
                V   A    + G      A+ T      +  E    R       KK +V++TDGE
Sbjct: 68  ---EEVLVAAKKIVQRGGRQTMTALGTDTARKEAFTEARGARR----GVKKVMVIVTDGE 120

Query: 379 NTQDNEEGIAICNKAKSQGIRIMTI----AFSVNKTQQEKARYFLSNCASPNS---FFEA 431
           +  DN     +    + + I+  +I    +++      EK    + + AS  +   FF  
Sbjct: 121 S-HDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNV 179

Query: 432 NSTHELNKIFRDRIGNEIF 450
           +    L  I    +G  IF
Sbjct: 180 SDELALVTIV-KTLGERIF 197