HHsearch alignment for GI: 254780390 and conserved domain: KOG0888
>KOG0888 consensus.
Probab=100.00 E-value=0 Score=316.32 Aligned_cols=137 Identities=45% Similarity=0.789 Sum_probs=134.8
Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140)
Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140)
T Consensus 5 ~e~tfi~iKpd~v~~~li~~ii~r~~~~gF~i~~~k~~~~s~~~~e~~Y~~~~~k~Ff~~Lv~~m~SGPv~amv~~g~~~ 84 (156)
T KOG0888 5 LERTFILIKPDGVQRGLIGEIIKRFEDKGFKIVALKLVQLSKELLEEHYSDLKSKPFFPGLVEYMSSGPVVAMVLEGDNV 84 (156)
T ss_pred HHHHHHEECCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHCCCCH
T ss_conf 55566305723544203379999998717506552002179999999999863786389999998338610041217779
Q ss_pred HHHHHHHCCCCCHHHC---CCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf 7899966188997776---89970001011522100440699899999998726856506
Q gi|254780390|r 83 ISKNREVMGDTDPKKA---LKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140)
Q Consensus 83 V~~~R~l~Gptdp~~a---~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140)
T Consensus 85 V~~~r~llG~t~~~~a~~~~pgsir~~f~~~~~rn~~HgSDs~~sA~rEi~~~F~~~e~~ 144 (156)
T KOG0888 85 VQYWRALLGPTNPAAARAAAPGSIRGDFGVDDGRNSIHGSDSVESAEREIKLWFPEFELV 144 (156)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
T ss_conf 999999838888431223589874300113677775546776777778988626613410