HHsearch alignment for GI: 254780390 and conserved domain: KOG0888

>KOG0888 consensus.
Probab=100.00  E-value=0  Score=316.32  Aligned_cols=137  Identities=45%  Similarity=0.789  Sum_probs=134.8

Q ss_pred             CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf             31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r    3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA   82 (140)
Q Consensus         3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na   82 (140)
T Consensus         5 ~e~tfi~iKpd~v~~~li~~ii~r~~~~gF~i~~~k~~~~s~~~~e~~Y~~~~~k~Ff~~Lv~~m~SGPv~amv~~g~~~   84 (156)
T KOG0888           5 LERTFILIKPDGVQRGLIGEIIKRFEDKGFKIVALKLVQLSKELLEEHYSDLKSKPFFPGLVEYMSSGPVVAMVLEGDNV   84 (156)
T ss_pred             HHHHHHEECCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHCCCCH
T ss_conf             55566305723544203379999998717506552002179999999999863786389999998338610041217779


Q ss_pred             HHHHHHHCCCCCHHHC---CCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             7899966188997776---89970001011522100440699899999998726856506
Q gi|254780390|r   83 ISKNREVMGDTDPKKA---LKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        83 V~~~R~l~Gptdp~~a---~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
T Consensus        85 V~~~r~llG~t~~~~a~~~~pgsir~~f~~~~~rn~~HgSDs~~sA~rEi~~~F~~~e~~  144 (156)
T KOG0888          85 VQYWRALLGPTNPAAARAAAPGSIRGDFGVDDGRNSIHGSDSVESAEREIKLWFPEFELV  144 (156)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
T ss_conf             999999838888431223589874300113677775546776777778988626613410