HHsearch alignment for GI: 254780390 and conserved domain: cd04413
>cd04413 NDPk_I Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate. The mammalian nm23/NDP kinase gene family can be divided into two distinct groups. The group I genes encode proteins that generally have highly homologous counterparts in other organisms and possess the classic enzymatic activity of a kinase. This group includes vertebrate NDP kinases A-D (Nm23- H1 to -H4), and its counterparts in bacteria, archea and other eukaryotes. NDP kinases exist in two different quaternary structures; all known eukaryotic enzymes are hexamers, while some bacterial enzymes are tetramers, as in Myxococcus. They possess the NDP kinase active site motif (NXXH[G/A]SD) and the nine residues that
Probab=100.00 E-value=0 Score=351.87 Aligned_cols=130 Identities=49% Similarity=0.843 Sum_probs=129.3
Q ss_pred CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCHH
Q ss_conf 10230455237718987999999972555892100112699999999888514742100122100111577111164017
Q gi|254780390|r 4 EKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEAI 83 (140)
Q Consensus 4 e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~naV 83 (140)
T Consensus 1 E~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~~~a~~fY~~~~~kpff~~lv~~m~sGpv~a~~l~g~naV 80 (130)
T cd04413 1 ERTLVIIKPDGVQRGLIGEIISRFERKGLKIVALKMLQLTEELAEEHYAEHKGKPFFPELVEFMTSGPVVAMVLEGENAV 80 (130)
T ss_pred CCEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCHH
T ss_conf 90699989405403778999999998699880301056999999999988539715475766643798799998659989
Q ss_pred HHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHC
Q ss_conf 89996618899777689970001011522100440699899999998726
Q gi|254780390|r 84 SKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWF 133 (140)
Q Consensus 84 ~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF 133 (140)
T Consensus 81 ~~~R~l~Gptdp~~A~p~siR~~fg~~~~~NavHgSDs~e~A~~Ei~~fF 130 (130)
T cd04413 81 KTVRKLMGATNPADAAPGTIRGDFALSIGRNIVHGSDSVESAEREIALWF 130 (130)
T ss_pred HHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHC
T ss_conf 99998828999555697314677378756479478899999999998649