HHsearch alignment for GI: 254780390 and conserved domain: cd04413

>cd04413 NDPk_I Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate. The mammalian nm23/NDP kinase gene family can be divided into two distinct groups. The group I genes encode proteins that generally have highly homologous counterparts in other organisms and possess the classic enzymatic activity of a kinase. This group includes vertebrate NDP kinases A-D (Nm23- H1 to -H4), and its counterparts in bacteria, archea and other eukaryotes. NDP kinases exist in two different quaternary structures; all known eukaryotic enzymes are hexamers, while some bacterial enzymes are tetramers, as in Myxococcus. They possess the NDP kinase active site motif (NXXH[G/A]SD) and the nine residues that
Probab=100.00  E-value=0  Score=351.87  Aligned_cols=130  Identities=49%  Similarity=0.843  Sum_probs=129.3

Q ss_pred             CEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCHH
Q ss_conf             10230455237718987999999972555892100112699999999888514742100122100111577111164017
Q gi|254780390|r    4 EKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEAI   83 (140)
Q Consensus         4 e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~naV   83 (140)
T Consensus         1 E~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~~~a~~fY~~~~~kpff~~lv~~m~sGpv~a~~l~g~naV   80 (130)
T cd04413           1 ERTLVIIKPDGVQRGLIGEIISRFERKGLKIVALKMLQLTEELAEEHYAEHKGKPFFPELVEFMTSGPVVAMVLEGENAV   80 (130)
T ss_pred             CCEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCHH
T ss_conf             90699989405403778999999998699880301056999999999988539715475766643798799998659989


Q ss_pred             HHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHC
Q ss_conf             89996618899777689970001011522100440699899999998726
Q gi|254780390|r   84 SKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWF  133 (140)
Q Consensus        84 ~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF  133 (140)
T Consensus        81 ~~~R~l~Gptdp~~A~p~siR~~fg~~~~~NavHgSDs~e~A~~Ei~~fF  130 (130)
T cd04413          81 KTVRKLMGATNPADAAPGTIRGDFALSIGRNIVHGSDSVESAEREIALWF  130 (130)
T ss_pred             HHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHHC
T ss_conf             99998828999555697314677378756479478899999999998649