HHsearch results for GI: 254780390 and protein with PDBid: 1nhk_R

Probab=100.00  E-value=0  Score=353.89  Aligned_cols=138  Identities=50%  Similarity=0.851  Sum_probs=136.3

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC
Q ss_conf             63102304552377189879999999725558921001126999999998885147421001221001115771111640
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE   81 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n   81 (140)
                      +||+||+||||||++++++|+|+++|+++||.|+++|++++|+++|++||++|+++|||++|++||+||||+||+|+|+|
T Consensus         1 a~E~Tl~iIKPdav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~~~ff~~l~~~m~Sgp~~a~vl~g~n   80 (144)
T 1nhk_R            1 AIERTLSIIKPDGLEKGVIGKIISRFEEKGLKPVAIRLQHLSQAQAEGFYAVHKARPFFKDLVQFMISGPVVLMVLEGEN   80 (144)
T ss_dssp             CEEEEEEEECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEEEET
T ss_pred             CHHHEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCC
T ss_conf             90470888890564048799999999987998999888854999999999997477448888730267987999995387


Q ss_pred             HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf             1789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r   82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII  139 (140)
Q Consensus        82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      ||..||+++|||||++|+|+||||+||.+.++|+||||||+++|.||++||||++||.
T Consensus        81 aV~~~R~l~Gpt~p~~a~p~siR~~fg~~~~~N~vH~SDs~e~A~rEi~~fFp~~ei~  138 (144)
T 1nhk_R           81 AVLANRDIMGATNPAQAAEGTIRKDFATSIDKNTVHGSDSLENAKIEIAYFFRETEIH  138 (144)
T ss_dssp             HHHHHHHHHCCSSGGGCCTTSHHHHHCCSSSSCSEEECSSHHHHHHHHHHHCCGGGCC
T ss_pred             CHHHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCHHHCC
T ss_conf             0777886524899012399981254357767569578899999999999739987733