HHsearch results for GI: 254780390 and protein with PDBid: 1pku_A
>1pku_A Nucleoside diphosphate kinase I; RICE, transferase; 2.50A {Oryza sativa} SCOP: d.58.6.1
Probab=100.00 E-value=0 Score=347.67 Aligned_cols=136 Identities=41% Similarity=0.767 Sum_probs=133.2
Q ss_pred CCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCCH
Q ss_conf 31023045523771898799999997255589210011269999999988851474210012210011157711116401
Q gi|254780390|r 3 IEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEEA 82 (140)
Q Consensus 3 ~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~na 82 (140)
|||||+||||||++++++|+|+++|+++||+|+++|++++|+++|++||.+|+|+|||++|++||+||||++|+|+|+||
T Consensus 2 ~E~Tl~iIKPdav~~~~~geIi~~i~~~Gf~I~~~k~~~ls~e~a~~~Y~~~~~~~ff~~lv~~m~SGp~~al~l~g~na 81 (150)
T 1pku_A 2 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDV 81 (150)
T ss_dssp CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHSGGGTTSTTHHHHHHHHHSSCEEEEEEESTTH
T ss_pred CCEEEEEECHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCH
T ss_conf 53479999904652477899999999869989998763389999999987543584999999876589879999747988
Q ss_pred HHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf 789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r 83 ISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140)
Q Consensus 83 V~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140)
|..||+++|||||.+|+|+||||+||++.++|+||||||+++|+||+++|||+ +|+
T Consensus 82 v~~~r~l~Gpt~p~~a~p~tiR~~fg~~~~~N~vH~SDs~e~A~rEi~~fFp~-~i~ 137 (150)
T 1pku_A 82 VATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPE-GLA 137 (150)
T ss_dssp HHHHHHHHCCSSGGGSCTTSHHHHHCSBTTBCSEEECSSHHHHHHHHHHHCTT-CCC
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCC-CCC
T ss_conf 98999875789912068998168756877744958999999999999953894-243