HHsearch results for GI: 254780390 and protein with PDBid: 3mpd_A
>3mpd_A Nucleoside diphosphate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, encepha cuniculi, structural genomics; 2.08A {Encephalitozoon cuniculi}
Probab=100.00 E-value=0 Score=351.97 Aligned_cols=137 Identities=42% Similarity=0.728 Sum_probs=134.0
Q ss_pred CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCCC
Q ss_conf 63102304552377189879999999725558921001126999999998885147421001221001115771111640
Q gi|254780390|r 2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHKDRPFFPELVQAMISGPVFLQVLKGEE 81 (140)
Q Consensus 2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~~k~ff~~lv~~m~sGpv~alvl~g~n 81 (140)
+|||||+|||||||+++++|+|+++|+++||+|+++|++++|+++|++||.+|+++|||++|+.||+||||+||+|+|+|
T Consensus 4 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~lt~e~a~~~Y~~~~~k~ff~~lv~~mtSgp~~a~vl~g~~ 83 (151)
T 3mpd_A 4 SMERTFIMIKPDAIKRRLISRIIQRFEEKGLYLAASKCVIPKREVLETHYSHLSSMPFFSEMVEDMMSGMVLAMVWVGKD 83 (151)
T ss_dssp -CCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTSTTHHHHHHHHTSSCEEEEEEESTT
T ss_pred HHHHHEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 35601458891353247799999999988899987550039799999998640588146637878457986999986254
Q ss_pred HHHHHHHHCCCCCHHHCCCCCCCHHCCCCHHHEEEEECCCHHHHHHHHHHHCCHHHCC
Q ss_conf 1789996618899777689970001011522100440699899999998726856506
Q gi|254780390|r 82 AISKNREVMGDTDPKKALKGTIRNKYGISIGENSIHGSDSLKTALEEISYWFARNEII 139 (140)
Q Consensus 82 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vH~Sds~e~a~rEi~~fF~~~ei~ 139 (140)
||.+||+++|||||++++|+||||+||.+.++|++|||||+|+|+||++||||+ ||+
T Consensus 84 aV~~~R~l~Gptdp~~a~p~tiR~~fg~~~~~N~vHgSDs~e~A~rEi~~fFp~-ei~ 140 (151)
T 3mpd_A 84 AVSIGRKLIGETNPQAASVGTIRGDYGVSTGKNIIHGSDCVENAEKEIKLWIGD-DVQ 140 (151)
T ss_dssp HHHHHHHHHCCSSTTTSCTTSHHHHHCCSSTTCSEEECSSHHHHHHHHHHHTCS-CCC
T ss_pred HHHHHHHHHCCCCHHHCCCCCHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCC-CCC
T ss_conf 388899875479810148998367646776866958899999999999964896-565