HHSEARCH alignment of GI: 254780390 and SCOP domain: d1xqia1

Alignment
>d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=100.00  E-value=0  Score=359.99  Aligned_cols=138  Identities=38%  Similarity=0.598  Sum_probs=133.6

Q ss_pred             CCCEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHHHC--------------------------
Q ss_conf             631023045523771898799999997255589210011269999999988851--------------------------
Q gi|254780390|r    2 VIEKTFSMIKPDAVKRNLIGSIVKELEDYGLCVVAAKFCWMNRKQAEDFYLIHK--------------------------   55 (140)
Q Consensus         2 ~~e~Tl~iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~ls~e~a~~fY~~~~--------------------------   55 (140)
                      .+||||+|||||||+++++|+||++|+++||+|+++|++++|+++|++||.+|+                          
T Consensus         1 p~ErTl~iIKPDav~~~lvg~Ii~~ie~~Gf~Iva~k~~~lt~e~a~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (182)
T d1xqia1           1 PVEKTLLILKPDAVARGLVDEIISRFKKAGLKIVALKMVKASPEEIERFYPSSEEWLQSAGQKLLKAYQELGIDPRAKIG   80 (182)
T ss_dssp             CCCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCCHHHHHS
T ss_pred             CCCEEEEEECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             97547999894054148899999999987998999760048999999999998887653002455566653024100012


Q ss_pred             -------CCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHCCCCCCCHHCCCCH----------HHEEEEE
Q ss_conf             -------47421001221001115771111640178999661889977768997000101152----------2100440
Q gi|254780390|r   56 -------DRPFFPELVQAMISGPVFLQVLKGEEAISKNREVMGDTDPKKALKGTIRNKYGISI----------GENSIHG  118 (140)
Q Consensus        56 -------~k~ff~~lv~~m~sGpv~alvl~g~naV~~~R~l~Gptdp~~a~p~tiR~~fg~~~----------~~N~vH~  118 (140)
                             |||||++|++|||||||+||+|+|+|||++||+|+|||||++|+|+||||+||.|.          .+|+|||
T Consensus        81 ~~~~~~~gk~f~~~Lv~~mtSgPvva~vleg~~aV~~~R~l~GptdP~~A~pgtIR~~fg~d~~~~~~~~~~~~rN~vH~  160 (182)
T d1xqia1          81 TDDPVEVGRIIKRNLVKYMTSGPNVVMVLKGNRAVEIVRKLVGPTSPHSAPPGTIRGDYSIDSPDLAAEEGRVVFNLVHA  160 (182)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTSSCEEEEEEESTTHHHHHHHHHCCSCGGGSCTTSHHHHHCCCCHHHHHHTTSCCCCSEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEC
T ss_conf             33310147752688999980686578985266799999998279994658999607763767410001236665420588


Q ss_pred             CCCHHHHHHHHHHHCCHHHCC
Q ss_conf             699899999998726856506
Q gi|254780390|r  119 SDSLKTALEEISYWFARNEII  139 (140)
Q Consensus       119 Sds~e~a~rEi~~fF~~~ei~  139 (140)
                      |||+++|+|||++|||++||+
T Consensus       161 SDs~e~A~rEi~~fF~~~ei~  181 (182)
T d1xqia1         161 SDSPSEAEREIRFWFREEEVL  181 (182)
T ss_dssp             CSSHHHHHHHHHHHCCGGGSC
T ss_pred             CCCHHHHHHHHHHCCCHHHCC
T ss_conf             899999999999648934216


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]