HHsearch alignment of GI: 254780391 and MMDB domain: 1c4o_A_410-664

>1c4o_A (A:410-664) DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hyperthermostable protein; HET: DNA BOG; 1.50A {Thermus thermophilus}
Probab=94.19  E-value=0.43  Score=26.84  Aligned_cols=91  Identities=11%  Similarity=0.075  Sum_probs=67.0

Q ss_pred             EECCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC------CCCCCEEEEECC
Q ss_conf             63167489999999999997798499982998999999998521882333133224777654------442206998328
Q gi|254780391|r    7 YRFKNDWEYNLLVLLQDEYEKGKRVSVQCGSERVRDSLNEYLWTWKKDGFLPHGVDVGDEGD------FSSFQPVLLTIS   80 (141)
Q Consensus         7 Y~l~~~~~~~~~~L~~K~~~~~~ri~I~~~d~~~~~~lD~~LW~~~~~sFiPH~~~~~~~~~------~~~~~PV~i~~~   80 (141)
                      ++-.......+..++.+....+.+++|+|.....++.|-++|+........=|+-.....-.      ......|+++++
T Consensus         9 ~~~~~~~~~~ll~~i~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~~~~~hg~~~~~~R~~i~~~F~~~~~~vLVaT~   88 (255)
T 1c4o_A            9 VKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGIN   88 (255)
T ss_dssp             EECSTTHHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESC
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             25444646899999999984598089995573069999999987798246426665403567788775068637998531


Q ss_pred             --CCCCCCCCEEEEEECCC
Q ss_conf             --66789981999981687
Q gi|254780391|r   81 --SLNANTSTIRFLVDEAS   97 (141)
Q Consensus        81 --~~~~~~~~~~~linl~~   97 (141)
                        .+..+-.++..+|+..+
T Consensus        89 ~l~~GiDi~~v~~VI~~d~  107 (255)
T 1c4o_A           89 LLREGLDIPEVSLVAILDA  107 (255)
T ss_dssp             CCCTTCCCTTEEEEEETTT
T ss_pred             CCCCCCCCCCCCEEEEECC
T ss_conf             4554311233428998526