HHsearch alignment of GI: 254780391 and MMDB domain: 1c4o_A_410-664
>1c4o_A (A:410-664) DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hyperthermostable protein; HET: DNA BOG; 1.50A {Thermus thermophilus}
Probab=94.19 E-value=0.43 Score=26.84 Aligned_cols=91 Identities=11% Similarity=0.075 Sum_probs=67.0
Q ss_pred EECCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC------CCCCCEEEEECC
Q ss_conf 63167489999999999997798499982998999999998521882333133224777654------442206998328
Q gi|254780391|r 7 YRFKNDWEYNLLVLLQDEYEKGKRVSVQCGSERVRDSLNEYLWTWKKDGFLPHGVDVGDEGD------FSSFQPVLLTIS 80 (141)
Q Consensus 7 Y~l~~~~~~~~~~L~~K~~~~~~ri~I~~~d~~~~~~lD~~LW~~~~~sFiPH~~~~~~~~~------~~~~~PV~i~~~ 80 (141)
++-.......+..++.+....+.+++|+|.....++.|-++|+........=|+-.....-. ......|+++++
T Consensus 9 ~~~~~~~~~~ll~~i~~~~~~~~k~iIF~~t~~~~~~l~~~L~~~g~~~~~~hg~~~~~~R~~i~~~F~~~~~~vLVaT~ 88 (255)
T 1c4o_A 9 VKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGIN 88 (255)
T ss_dssp EECSTTHHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 25444646899999999984598089995573069999999987798246426665403567788775068637998531
Q ss_pred --CCCCCCCCEEEEEECCC
Q ss_conf --66789981999981687
Q gi|254780391|r 81 --SLNANTSTIRFLVDEAS 97 (141)
Q Consensus 81 --~~~~~~~~~~~linl~~ 97 (141)
.+..+-.++..+|+..+
T Consensus 89 ~l~~GiDi~~v~~VI~~d~ 107 (255)
T 1c4o_A 89 LLREGLDIPEVSLVAILDA 107 (255)
T ss_dssp CCCTTCCCTTEEEEEETTT
T ss_pred CCCCCCCCCCCCEEEEECC
T ss_conf 4554311233428998526