HHsearch alignment of GI: 254780392 and MMDB domain: 3isz_A_1-177_299-377

>3isz_A (A:1-177,A:299-377) Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2; 2.00A {Haemophilus influenzae rd KW20} PDB: 3ic1_A
Probab=92.47  E-value=0.33  Score=28.10  Aligned_cols=186  Identities=15%  Similarity=0.049  Sum_probs=98.8

Q ss_pred             HHHHHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf             9999864202125403029999999998-611332100001110001345898874202577850688620578865651
Q gi|254780392|r  176 KGVNLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQP  254 (494)
Q Consensus       176 egv~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~p  254 (494)
                      +-+.+.|+|++.|.--......++..++ |++.|+++++.+...      +..+-...+...|+.++..++.--.     
T Consensus         4 ~~i~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~------~~~~~~~~~~~~~~i~l~~h~d~v~-----   72 (256)
T 3isz_A            4 KVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFND------TLNLWAKHGTSEPVIAFAGHTDVVP-----   72 (256)
T ss_dssp             HHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTT------BCEEEEEEESSSCEEEEEEECCBCC-----
T ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC------EEEEEEECCCCCCEEEEECCCCCCC-----
T ss_conf             99999999947999798858999999999997799489998199------8899998689998799979888589-----


Q ss_pred             EEEEECCEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCC--CCCEEEEEEECCCC--CCCCCCCHHHHHC
Q ss_conf             2663021120066310033332002-32211235689999999987087--87289986410266--8999747077630
Q gi|254780392|r  255 LAFIGKGVVFDTGGISIKPSHGMEE-MKGDLGGAAAVTGLLHVLAERKA--KINAIGVLALVENM--PGSSAQRPGDIVR  329 (494)
Q Consensus       255 iaLVGKGvTFDtGGislKp~~~M~~-Mk~DM~GaAav~g~~~aia~l~~--~v~v~~~~~~~EN~--~~~~a~~pgdvi~  329 (494)
                       .-.+...+||.-....+...-.-. .--|.+|.|+++.+++++.+.+.  +.+|+.+.-..|-.  .++..+       
T Consensus        73 -~~~~~~~~~~~~~~~~~~~~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~f~~~EE~G~~~g~~~-------  144 (256)
T 3isz_A           73 -TGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIH-------  144 (256)
T ss_dssp             -CCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHH-------
T ss_pred             -CCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHH-------
T ss_conf             -887643432233315743753010244443321014677898776404777337750000112110477224-------


Q ss_pred             CCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH-HCCCC
Q ss_conf             24895888634786640365236788752079613552111200235431776057870898999999998998-56971
Q gi|254780392|r  330 SMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLS-TGELL  408 (494)
Q Consensus       330 ~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~-~ge~~  408 (494)
                                         +.+...  ....+++.+|..-.-.+-.       .....+..+.+.+.+.++.+. .|.+.
T Consensus       145 -------------------~~~~~~--~~~~~~d~~i~~e~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~  196 (256)
T 3isz_A          145 -------------------VVETLM--ARDEKITYCMVGEPSSAKN-------LGDVVKNGGKLLDSITSAIEETIGITP  196 (256)
T ss_dssp             -------------------HHHHHH--HTTCCCCEEEECCCCBSSS-------TTSEEEEETHHHHHHHHHHHHHHSCCC
T ss_pred             -------------------HHHHHH--HCCCCCEEEEEECCCCCCC-------CCCEEEEECHHHHHHHHHHHHHHCCCC
T ss_conf             -------------------456665--2467734999947888655-------774477714599999999999878997