HHsearch results for GI: 254780392 and protein with PDBid: 1lam_A

Probab=100.00  E-value=0  Score=1115.22  Aligned_cols=460  Identities=33%  Similarity=0.506  Sum_probs=404.2

Q ss_pred             CCEEEEEECCCCC--CCC------CCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHCC---
Q ss_conf             7716999626866--322------22123888899999980899836787899843788874459999448815589---
Q gi|254780392|r   15 QEGLAILLKTSFS--DVA------GLSLIGSPSIVMRAVSVKNFIGESKSHLNILAPVDCVWDRLVVAGIGDPRDAN---   83 (494)
Q Consensus        15 ~d~lvV~~~~~~~--~~~------~~~~~~~~~~L~~~i~~~~F~GK~Ge~l~l~~~~g~~~~rViLVGLG~~~~~~---   83 (494)
                      +.+|||.+..+..  ...      ...+....+.|.++++..+|+||.||++.++.+. ...+||+|||||+++...   
T Consensus         1 T~~LVvGVf~~~~~~~~~~Ls~~a~~lDk~~~G~L~~~lk~~~f~GK~Get~~l~~~~-~~~~rVlLVGLGk~~~~~~~~   79 (484)
T 1lam_A            1 TKGLVLGIYSKEKEEDEPQFTSAGENFNKLVSGKLREILNISGPPLKAGKTRTFYGLH-EDFPSVVVVGLGKKTAGIDEQ   79 (484)
T ss_dssp             CEEEEEEECCCCTTCSSCCBCHHHHHHHHHTTTHHHHHHHHTCSCCCTTCEEEEEEEE-TTEEEEEEEECCCTTCCEETT
T ss_pred             CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEECCC-CCCCEEEEEECCCCCCCCCHH
T ss_conf             9439999963677776666598999999982549999997279998878779973799-987889999688753357878


Q ss_pred             ------HH-HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ------99-99999999998531697489941778999989999999999714777544443643332321000133322
Q gi|254780392|r   84 ------FS-WLKAGGSIASYIEEDKNIEIFVDVPEYPITKAEIRDLVLGFMLKTYTFDQYKTKKRESSSPRSKENISVTI  156 (494)
Q Consensus        84 ------~~-~~ra~a~~~~~l~~~~~~~v~i~l~~~~~~~~~~~~~~eG~~L~~Y~Fd~yKskk~~~~~~~~~~~~~i~~  156 (494)
                            .+ .+++.++.++.+.......+.+...      +.+++++||+.|++|+|++||++++....        ..+
T Consensus        80 ~~~~~~~~~~r~a~~~~~k~l~~~~~~~~~~~~~------~~a~a~aeG~~Lg~Y~F~~ykskkk~~~~--------~~~  145 (484)
T 1lam_A           80 ENWHEGKENIRAAVAAGCRQIQDLEIPSVEVDPC------GDAQAAAEGAVLGLYEYDDLKQKRKVVVS--------AKL  145 (484)
T ss_dssp             TTEEHHHHHHHHHHHHHHHHHHHTTCSEEEECCT------TCHHHHHHHHHHHHCCCCTTCSSCCCCCE--------EEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCH------HHHHHHHHHHHHCCCCCCCCCCCCCCCEE--------EEC
T ss_conf             9999999999999999999874267751223947------99999999999677104644566664101--------322


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCCCCCHHH--HCCCCCCHHHHHHHHHHHCC
Q ss_conf             457737899999999999999998642021254030299999999986-113321000--01110001345898874202
Q gi|254780392|r  157 VTEMIQQSSQVVADIQSVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESLGVAVEI--LDKEAMHKLGMNALLAVAQG  233 (494)
Q Consensus       157 ~~~~~~~~~~~i~~~~aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~gl~v~V--ld~~~L~klGMg~llaVgqG  233 (494)
                      .   ....++.+++++++++|+++||||+|+|||+|||++|+++++++ ++++++|+|  +++++|+++|||+||+||||
T Consensus       146 ~---~~~~~~~~~~~~~i~~gv~laRdL~n~P~N~ltP~~~a~~a~~~~~~~~~~v~v~~~~~~~l~~~gmg~~laVg~G  222 (484)
T 1lam_A          146 H---GSEDQEAWQRGVLFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKG  222 (484)
T ss_dssp             S---SSSCHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTT
T ss_pred             C---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCEEEEEECC
T ss_conf             5---7167999999999999999999864479612298999999999987528715650466999984599705776126


Q ss_pred             CCCCCEEEEEECCCCCC-CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             57785068862057886-56512663021120066310033332002322112356899999999870878728998641
Q gi|254780392|r  234 SSRPPYLAVMKWEGGDS-EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLAL  312 (494)
Q Consensus       234 S~~~Prli~l~Y~g~~~-~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~  312 (494)
                      |.+|||||+|+|+|.++ +++||+|||||||||||||||||+.+|++||+||||||+|+|+|++++++++|+||++++|+
T Consensus       223 S~~~P~li~l~y~g~~~~~~~~i~lVGKGiTFDtGG~sLKp~~~M~~Mk~DM~GAA~v~g~~~a~a~~~~~~~v~~~~~~  302 (484)
T 1lam_A          223 SEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPL  302 (484)
T ss_dssp             SSSCCEEEEEEEECSSSTTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             CCCCCCEEEEEECCCCCCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             77897246885047655567877996362265058867688767444220131258999999999983699766999973


Q ss_pred             CCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHH
Q ss_conf             02668999747077630248958886347866403652367887520796135521112002354317760578708989
Q gi|254780392|r  313 VENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDV  392 (494)
Q Consensus       313 ~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~  392 (494)
                      ||||||++|||||||||+||||||||.||||||||||||+|+|| ++++|+.|||+|||||||++|||++++|+|+|||+
T Consensus       303 ~eN~~~~~a~~pgDvi~~~~G~tvEi~nTDAEGRLvLaDal~ya-~~~~p~~iiD~ATLTGa~~~alG~~~~g~~~n~~~  381 (484)
T 1lam_A          303 CENMPSGKANKPGDVVRARNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVIINAATLTGAMDIALGSGATGVFTNSSW  381 (484)
T ss_dssp             EEECCSTTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHH-HTTCCSEEEEEECCCHHHHHHHTTSCEEEEESCHH
T ss_pred             EECCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEHHHHHHH-HHCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf             52367888888997788469954233237865336750277886-50398514421213010316268863222038899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHH-HHCCCCCCEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
Q ss_conf             999999989985697176776867888-61798641701888-7467999999998723886769994000011678888
Q gi|254780392|r  393 LAEQLLSSGLSTGELLWRMPMNEEYNK-LIESKFADMKNIGG-RGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKE  470 (494)
Q Consensus       393 ~~~~~~~a~~~~ge~~w~lPl~~~y~~-~~~s~~AD~~n~~~-~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~  470 (494)
                      +++++++||+++||++||||||++|.+ .++|++|||+|+++ |+||+|+||+||+|||+++||+|||||||+|.+++++
T Consensus       382 l~~~~~~a~~~~ge~~w~lPl~~~y~~~~~~s~~AD~~N~~~~~~~g~~~aa~FL~~Fv~~~~w~HlDiAg~a~~~~~~~  461 (484)
T 1lam_A          382 LWNKLFEASIETGDRVWRMPLFEHYTRQVIDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVP  461 (484)
T ss_dssp             HHHHHHHHHHHHSCCEEECCCCHHHHHHHHCCSSSSEESSCSSSTTHHHHHHHHHHTTCCCSSEEEEECGGGSEESSSST
T ss_pred             HHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
T ss_conf             99999999998189754588966676765399603102799689826569999999758997979997773362689876


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             88998654358999999997668
Q gi|254780392|r  471 INQSWASGFGVRLLDEFVRAFYE  493 (494)
Q Consensus       471 ~~~~g~tg~~vr~l~~~~~~~~~  493 (494)
                      |.|+|+||||||||+|||+++-+
T Consensus       462 ~~~~g~tG~~vr~l~~~l~~~~~  484 (484)
T 1lam_A          462 YLRKGMAGRPTRTLIEFLFRFSQ  484 (484)
T ss_dssp             TSCSEECCTTHHHHHHHHHHHHC
T ss_pred             CCCCCEEEHHHHHHHHHHHHHCC
T ss_conf             89998060219999999998619