HHSEARCH alignment of GI: 254780392 and SCOP domain: d1gyta2

Alignment
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]}
Probab=100.00  E-value=0  Score=941.35  Aligned_cols=315  Identities=46%  Similarity=0.784  Sum_probs=303.5

Q ss_pred             HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCC--CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC
Q ss_conf             99999998642021254030299999999986-113--321000011100013458988742025778506886205788
Q gi|254780392|r  173 SVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESL--GVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGD  249 (494)
Q Consensus       173 aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~--gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~  249 (494)
                      ||++|+++||||+|+|||+|||++|+++++++ +++  +++|+|+++++|+++|||+||+|||||++|||||+|+|+|.+
T Consensus         1 Aia~gvn~aRdLvn~P~N~ltP~~~a~~a~~l~~~~~~~v~v~V~~~~~l~~~Gm~~llaVg~GS~~~p~li~l~y~~~~   80 (325)
T d1gyta2           1 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA   80 (325)
T ss_dssp             HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred             CHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCC
T ss_conf             98899999998607992553999999999999987399759999559999757998746785035788871278856866


Q ss_pred             C-CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             6-565126630211200663100333320023221123568999999998708787289986410266899974707763
Q gi|254780392|r  250 S-EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIV  328 (494)
Q Consensus       250 ~-~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi  328 (494)
                      . +.+||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||++++|+||||||++||||||||
T Consensus        81 ~~~~~~i~lVGKGitFDTGG~slKp~~~M~~Mk~DM~GAA~v~g~~~a~a~l~~~~~v~~~~p~~EN~i~~~A~kPgDVi  160 (325)
T d1gyta2          81 SEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVL  160 (325)
T ss_dssp             CTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTCCCTTCEE
T ss_pred             CCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCEE
T ss_conf             67888779972616873366564456543554431224145788999999728686499997511115678763678745


Q ss_pred             CCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf             02489588863478664036523678875207961355211120023543177605787089899999999899856971
Q gi|254780392|r  329 RSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELL  408 (494)
Q Consensus       329 ~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~~ge~~  408 (494)
                      |+||||||||.||||||||||||+|+||+ +++|+.|||+|||||||++|||+.++|+|+||++++++++++|+.+||++
T Consensus       161 ~s~~GkTVEI~NTDAEGRLvLADaL~ya~-~~~p~~iiD~ATLTGa~~~ALG~~~ag~~~n~~~~~~~~~~a~~~~ge~~  239 (325)
T d1gyta2         161 TTMSGQTVEVLNTDAEGRLVLCDVLTYVE-RFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRA  239 (325)
T ss_dssp             ECTTSCEEECSCTTCCHHHHHHHHHHHGG-GGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHHHHHHHHHHTCCE
T ss_pred             ECCCCCEEEEECCCCCCHHHHHHHHHHHH-HHCCCEEECCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf             63699478763167531100167899998-60975023034654600042157424762251677889999999837843


Q ss_pred             CCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             76776867888617986417018887467999999998723886769994000011678888889986543589999999
Q gi|254780392|r  409 WRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEFV  488 (494)
Q Consensus       409 w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~~~  488 (494)
                      ||||+|++|+++++|++|||+|++++.+|+|+||+||++||+++||+|||||||+|.++    .++|+||||||||+|||
T Consensus       240 w~lPl~~~~~~~~~S~~ADl~n~~~~~~g~~~aA~FL~~Fv~~~~w~HlDIAg~a~~~~----~~~gaTG~gvr~l~~~l  315 (325)
T d1gyta2         240 WRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSG----KAKGATGRPVALLAQFL  315 (325)
T ss_dssp             EECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTTSEECG----GGCEECCTTHHHHHHHH
T ss_pred             CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC----CCCCCCCHHHHHHHHHH
T ss_conf             22256576786358984521258989703789999999838998989991677776799----99995305599999999


Q ss_pred             HHHC
Q ss_conf             9766
Q gi|254780392|r  489 RAFY  492 (494)
Q Consensus       489 ~~~~  492 (494)
                      ++++
T Consensus       316 ~~~~  319 (325)
T d1gyta2         316 LNRA  319 (325)
T ss_dssp             HHHT
T ss_pred             HHHH
T ss_conf             9986


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Leucine aminopeptidase, C-terminal domain
domain: Leucine aminopeptidase, C-terminal domain
species: Escherichia coli, PepA [TaxId: 562]