Query gi|254780392|ref|YP_003064805.1| leucyl aminopeptidase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 494
No_of_seqs 253 out of 1989
Neff 7.4
Searched_HMMs 13730
Date Wed Jun 1 04:43:30 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780392.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gyta2 c.56.5.3 (A:179-503) L 100.0 0 0 941.3 26.7 315 173-492 1-319 (325)
2 d1lama1 c.56.5.3 (A:160-484) L 100.0 0 0 936.1 28.2 319 174-493 1-325 (325)
3 d1gyta1 c.50.1.1 (A:1-178) Leu 99.8 1.6E-19 1.2E-23 154.5 16.1 146 1-146 1-153 (178)
4 d1lama2 c.50.1.1 (A:1-159) Leu 99.6 1.8E-14 1.3E-18 119.0 10.7 124 15-145 1-142 (159)
5 g1q7l.1 c.56.5.4 (A:,B:) Amino 94.0 0.2 1.4E-05 26.9 9.3 120 176-316 5-143 (280)
6 d2grea2 c.56.5.4 (A:3-73,A:187 92.8 0.055 4E-06 30.8 4.0 217 176-491 5-230 (233)
7 d1vhea2 c.56.5.4 (A:3-72,A:163 91.3 0.29 2.1E-05 25.7 6.2 120 176-316 4-124 (275)
8 d1yloa2 c.56.5.4 (A:1-66,A:148 88.6 0.53 3.9E-05 23.8 5.8 115 179-316 4-119 (264)
9 d1vgya1 c.56.5.4 (A:2-180,A:29 84.5 1.2 8.5E-05 21.4 9.3 117 176-314 4-134 (262)
10 d2hgaa1 b.36.1.6 (A:23-125) Un 79.2 0.24 1.8E-05 26.3 0.6 56 307-373 5-60 (103)
11 d1cg2a1 c.56.5.4 (A:26-213,A:3 76.0 2.2 0.00016 19.5 10.5 121 175-316 16-152 (276)
12 d1sota1 b.36.1.4 (A:255-353) S 74.2 0.39 2.9E-05 24.8 0.6 51 308-369 29-80 (99)
13 d1vhoa2 c.56.5.4 (A:3-69,A:153 68.3 3.2 0.00023 18.3 5.4 174 178-408 4-186 (248)
14 d1ky9a1 b.36.1.4 (A:260-353) P 67.2 0.99 7.2E-05 22.0 1.4 40 298-337 19-60 (94)
15 d2z9ia1 b.36.1.4 (A:227-314) P 65.0 0.9 6.5E-05 22.3 0.8 52 307-369 18-70 (88)
16 d1ky9b2 b.36.1.4 (B:359-446) P 54.8 0.77 5.6E-05 22.7 -1.0 29 309-337 29-58 (88)
17 d1lcya1 b.36.1.4 (A:226-325) M 54.4 0.6 4.3E-05 23.5 -1.6 31 307-337 33-64 (100)
18 d1fc6a3 b.36.1.3 (A:157-248) P 52.5 0.71 5.2E-05 23.0 -1.5 31 307-337 21-52 (92)
19 d2fvga2 c.56.5.4 (A:1-64,A:149 49.3 1.8 0.00013 20.1 0.2 57 181-245 3-60 (255)
20 d2aiba1 a.134.1.1 (A:1-98) bet 41.6 8.6 0.00063 15.3 2.7 39 265-305 30-71 (98)
21 d1sroa_ b.40.4.5 (A:) S1 RNA-b 40.8 7 0.00051 16.0 2.1 47 303-350 26-72 (76)
22 d2h3la1 b.36.1.1 (A:1310-1412) 31.9 8.5 0.00062 15.3 1.4 42 307-356 45-86 (103)
23 d2ba0a1 b.40.4.5 (A:53-135) S1 31.8 12 0.00088 14.3 3.2 47 304-350 27-73 (83)
24 d1hh2p1 b.40.4.5 (P:127-198) S 31.3 12 0.00089 14.2 3.0 41 305-349 30-70 (72)
25 d2i6va1 b.36.1.5 (A:219-305) G 26.6 4.6 0.00033 17.3 -0.8 28 310-337 24-52 (87)
26 d1m7xa2 b.71.1.1 (A:623-728) 1 26.2 14 0.001 13.9 1.6 16 329-344 47-62 (106)
27 d1jsxa_ c.66.1.20 (A:) Glucose 25.7 15 0.0011 13.6 2.8 34 295-332 107-140 (207)
28 d2nn6i1 b.40.4.5 (I:61-185) Ex 25.0 4.8 0.00035 17.1 -0.9 13 319-331 59-71 (125)
29 d1l1ca_ b.35.2.1 (A:) LicT {Ba 23.9 13 0.00096 14.0 1.2 14 253-266 20-33 (55)
30 d1fxza1 b.82.1.2 (A:10-248) Se 23.8 16 0.0012 13.3 1.8 101 210-350 23-135 (239)
31 d1rtqa_ c.56.5.4 (A:) Aminopep 22.6 17 0.0013 13.2 6.5 102 239-345 76-182 (291)
32 d1e3pa2 b.40.4.5 (A:656-717) S 22.0 7 0.00051 16.0 -0.5 44 303-346 16-62 (62)
33 d2gl5a1 c.1.11.2 (A:123-400) P 21.0 19 0.0014 13.0 2.5 85 183-272 170-255 (278)
34 d1vdca2 c.3.1.5 (A:118-243) Th 20.8 19 0.0014 12.9 1.5 13 67-79 33-45 (130)
35 d1k32a1 b.36.1.3 (A:763-853) T 20.1 6.9 0.0005 16.0 -0.9 24 314-337 29-54 (91)
No 1
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]}
Probab=100.00 E-value=0 Score=941.35 Aligned_cols=315 Identities=46% Similarity=0.784 Sum_probs=303.5
Q ss_pred HHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCC--CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC
Q ss_conf 99999998642021254030299999999986-113--321000011100013458988742025778506886205788
Q gi|254780392|r 173 SVVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESL--GVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGD 249 (494)
Q Consensus 173 aiaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~--gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~ 249 (494)
||++|+++||||+|+|||+|||++|+++++++ +++ +++|+|+++++|+++|||+||+|||||++|||||+|+|+|.+
T Consensus 1 Aia~gvn~aRdLvn~P~N~ltP~~~a~~a~~l~~~~~~~v~v~V~~~~~l~~~Gm~~llaVg~GS~~~p~li~l~y~~~~ 80 (325)
T d1gyta2 1 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 80 (325)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCC
T ss_conf 98899999998607992553999999999999987399759999559999757998746785035788871278856866
Q ss_pred C-CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf 6-565126630211200663100333320023221123568999999998708787289986410266899974707763
Q gi|254780392|r 250 S-EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIV 328 (494)
Q Consensus 250 ~-~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi 328 (494)
. +.+||+|||||||||||||||||+.+|.+||+||||||+|+|+|+++++|++|+||++++|+||||||++||||||||
T Consensus 81 ~~~~~~i~lVGKGitFDTGG~slKp~~~M~~Mk~DM~GAA~v~g~~~a~a~l~~~~~v~~~~p~~EN~i~~~A~kPgDVi 160 (325)
T d1gyta2 81 SEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVL 160 (325)
T ss_dssp CTTCCCEEEEEEEEEEECCTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTCCCTTCEE
T ss_pred CCCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCEE
T ss_conf 67888779972616873366564456543554431224145788999999728686499997511115678763678745
Q ss_pred CCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf 02489588863478664036523678875207961355211120023543177605787089899999999899856971
Q gi|254780392|r 329 RSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELL 408 (494)
Q Consensus 329 ~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~~ge~~ 408 (494)
|+||||||||.||||||||||||+|+||+ +++|+.|||+|||||||++|||+.++|+|+||++++++++++|+.+||++
T Consensus 161 ~s~~GkTVEI~NTDAEGRLvLADaL~ya~-~~~p~~iiD~ATLTGa~~~ALG~~~ag~~~n~~~~~~~~~~a~~~~ge~~ 239 (325)
T d1gyta2 161 TTMSGQTVEVLNTDAEGRLVLCDVLTYVE-RFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRA 239 (325)
T ss_dssp ECTTSCEEECSCTTCCHHHHHHHHHHHGG-GGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHHHHHHHHHHTCCE
T ss_pred ECCCCCEEEEECCCCCCHHHHHHHHHHHH-HHCCCEEECCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf 63699478763167531100167899998-60975023034654600042157424762251677889999999837843
Q ss_pred CCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 76776867888617986417018887467999999998723886769994000011678888889986543589999999
Q gi|254780392|r 409 WRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEFV 488 (494)
Q Consensus 409 w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~~~ 488 (494)
||||+|++|+++++|++|||+|++++.+|+|+||+||++||+++||+|||||||+|.++ .++|+||||||||+|||
T Consensus 240 w~lPl~~~~~~~~~S~~ADl~n~~~~~~g~~~aA~FL~~Fv~~~~w~HlDIAg~a~~~~----~~~gaTG~gvr~l~~~l 315 (325)
T d1gyta2 240 WRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSG----KAKGATGRPVALLAQFL 315 (325)
T ss_dssp EECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTCTTSCEEEEECTTTSEECG----GGCEECCTTHHHHHHHH
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC----CCCCCCCHHHHHHHHHH
T ss_conf 22256576786358984521258989703789999999838998989991677776799----99995305599999999
Q ss_pred HHHC
Q ss_conf 9766
Q gi|254780392|r 489 RAFY 492 (494)
Q Consensus 489 ~~~~ 492 (494)
++++
T Consensus 316 ~~~~ 319 (325)
T d1gyta2 316 LNRA 319 (325)
T ss_dssp HHHT
T ss_pred HHHH
T ss_conf 9986
No 2
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=0 Score=936.08 Aligned_cols=319 Identities=42% Similarity=0.709 Sum_probs=305.0
Q ss_pred HHHHHHHHHHHCCCCCEEECHHHHHHHHHHH-HCCCCCHH--HHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
Q ss_conf 9999998642021254030299999999986-11332100--00111000134589887420257785068862057886
Q gi|254780392|r 174 VVKGVNLARDIINEPANVLGTDEFCKQVRKL-ESLGVAVE--ILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDS 250 (494)
Q Consensus 174 iaegv~lARDLvN~PaN~ltP~~lA~~a~~l-~~~gl~v~--Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~ 250 (494)
.++|+|+||||+|+|||+|||++|+++++++ ++++++++ ++++++|+++|||+||+|||||.+|||||+|+|+|+++
T Consensus 1 ~a~g~~~aRdL~n~P~N~ltP~~~a~~~~~~~~~~~~~v~v~~~~~~~l~~~gmg~~laVg~GS~~~p~li~l~y~~~~~ 80 (325)
T d1lama1 1 FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPN 80 (325)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSS
T ss_pred CHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCC
T ss_conf 91589999987179825529999999999988753985899978478997379973887514677777422786125677
Q ss_pred -CCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHC
Q ss_conf -5651266302112006631003333200232211235689999999987087872899864102668999747077630
Q gi|254780392|r 251 -EEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVR 329 (494)
Q Consensus 251 -~~~piaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi~ 329 (494)
+++||+|||||||||||||||||+.+|++||+||||||+|+|+|++++++++|+||++++|+||||||++|||||||||
T Consensus 81 ~~~~~i~lVGKGVtFDtGG~~lK~~~~m~~Mk~Dm~GaA~v~g~~~~~~~~~~~~~v~~i~~~~EN~i~~~a~~pgDVi~ 160 (325)
T d1lama1 81 ASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPLCENMPSGKANKPGDVVR 160 (325)
T ss_dssp TTSCCEEEEECEEEEECCTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTSCCTTEEEE
T ss_pred CCCCCEEEECCEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEE
T ss_conf 66453899624157404455611210121103444320589999999998468954999997630146788646787788
Q ss_pred CCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf 24895888634786640365236788752079613552111200235431776057870898999999998998569717
Q gi|254780392|r 330 SMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLW 409 (494)
Q Consensus 330 ~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~n~~~~~~~~~~a~~~~ge~~w 409 (494)
+||||||||.||||||||||||+|+|+ ++++|++|||+|||||||++|||.+++|+|+||++++++++++|+.+||++|
T Consensus 161 s~~GktVEI~NTDAEGRLvLADaL~ya-~~~~p~~iiD~ATLTGa~~~AlG~~~~g~~~n~~~~~~~l~~ag~~~gE~vw 239 (325)
T d1lama1 161 ARNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEASIETGDRVW 239 (325)
T ss_dssp CTTSCEEEESCTTCCHHHHHHHHHHHH-HTTCCSEEEEEECCCHHHHHHHTTSCEEEEESCHHHHHHHHHHHHHHSCCEE
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHHH-HCCCCCCEEEECCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf 248962454147862120025676654-3238862355404566308983684246741615679999877776588355
Q ss_pred CCCCCHHHH-HHHCCCCCCEECCCC-CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 677686788-861798641701888-746799999999872388676999400001167888888998654358999999
Q gi|254780392|r 410 RMPMNEEYN-KLIESKFADMKNIGG-RGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDEF 487 (494)
Q Consensus 410 ~lPl~~~y~-~~~~s~~AD~~n~~~-~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~~ 487 (494)
|||+|++|+ +.++|++|||+|+++ |.+|+|+||+||++||+++||+|||||||+|..++.+|.|+|+||||||||++|
T Consensus 240 ~lPl~~~y~~~~~~S~~ADl~N~~~~~~ag~~~AA~FL~~Fv~~~~w~HlDIAg~a~~~~~~~~~~~G~tg~gvr~l~~~ 319 (325)
T d1lama1 240 RMPLFEHYTRQVIDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTLIEF 319 (325)
T ss_dssp ECCCCHHHHHHHHCCSSSSEESSCSSSTTHHHHHHHHHHTTCCCSSEEEEECGGGSEESSSSTTSCSEECCTTHHHHHHH
T ss_pred EEECCHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHH
T ss_conf 33032144431025312210468999985013999999964899886999777645268887789998075209999999
Q ss_pred HHHHCC
Q ss_conf 997668
Q gi|254780392|r 488 VRAFYE 493 (494)
Q Consensus 488 ~~~~~~ 493 (494)
|+++-|
T Consensus 320 l~~~s~ 325 (325)
T d1lama1 320 LFRFSQ 325 (325)
T ss_dssp HHHHHC
T ss_pred HHHHCC
T ss_conf 998629
No 3
>d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]}
Probab=99.83 E-value=1.6e-19 Score=154.53 Aligned_cols=146 Identities=15% Similarity=0.156 Sum_probs=120.0
Q ss_pred CEEEEEEECCCCCCCCEEEEEECCCCCCC--CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCC
Q ss_conf 90699950778776771699962686632--2221238888999999808998367878998437888744599994488
Q gi|254780392|r 1 MDIKFSFAKNPSIKQEGLAILLKTSFSDV--AGLSLIGSPSIVMRAVSVKNFIGESKSHLNILAPVDCVWDRLVVAGIGD 78 (494)
Q Consensus 1 M~mkis~~~~~~~~~d~lvV~~~~~~~~~--~~~~~~~~~~~L~~~i~~~~F~GK~Ge~l~l~~~~g~~~~rViLVGLG~ 78 (494)
|++.++.......++|+++|++.++.... ....+....+.|.++++..+|+||.|+++.++.+.+..++||+|||||+
T Consensus 1 M~f~i~~~~~~~~~~d~LVv~v~e~~~~~~~~~~ld~~~~~~i~~~~~~~~f~gk~g~~~~l~~~~~~~~~rvllvGlG~ 80 (178)
T d1gyta1 1 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGK 80 (178)
T ss_dssp CEEEEECCCGGGCCSSCEEEEEETTTEECHHHHHHHTTSSSHHHHHHHHTSCCCCTTCEEEEESCTTCSSSEEEEEECCS
T ss_pred CEEEEECCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEECC
T ss_conf 97799769921415798999992798655889998398778999999726766553048999679997611899995077
Q ss_pred HHHCCHH-HHHHHHHHHHHHHHCCCEEEEECCCCCCC----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 1558999-99999999998531697489941778999----98999999999971477754444364333232
Q gi|254780392|r 79 PRDANFS-WLKAGGSIASYIEEDKNIEIFVDVPEYPI----TKAEIRDLVLGFMLKTYTFDQYKTKKRESSSP 146 (494)
Q Consensus 79 ~~~~~~~-~~ra~a~~~~~l~~~~~~~v~i~l~~~~~----~~~~~~~~~eG~~L~~Y~Fd~yKskk~~~~~~ 146 (494)
.++++.+ ++++++++++.++..+.+++.+.++.... ..+.++++++|+.|++|+|++||++++++..+
T Consensus 81 ~~~~~~~~~rk~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~l~~Y~f~~yKskk~~~~~~ 153 (178)
T d1gyta1 81 ERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRP 153 (178)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHSCCSEEEECGGGSCBTTBCHHHHHHHHHHHHHHHHCCCCTTCSSCCCCCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
T ss_conf 6776999999999999998520367339998335565678979999999999996681156440588887787
No 4
>d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.55 E-value=1.8e-14 Score=118.97 Aligned_cols=124 Identities=14% Similarity=0.087 Sum_probs=91.1
Q ss_pred CCEEEEEECCCCC--------CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHC----
Q ss_conf 7716999626866--------3222212388889999998089983678789984378887445999944881558----
Q gi|254780392|r 15 QEGLAILLKTSFS--------DVAGLSLIGSPSIVMRAVSVKNFIGESKSHLNILAPVDCVWDRLVVAGIGDPRDA---- 82 (494)
Q Consensus 15 ~d~lvV~~~~~~~--------~~~~~~~~~~~~~L~~~i~~~~F~GK~Ge~l~l~~~~g~~~~rViLVGLG~~~~~---- 82 (494)
+++|+|.+..... +.....+....+.|.++++..+|+||.||++.+|.+. ..++||+|||||++++.
T Consensus 1 t~~LVvGv~~~~~~~~~~~L~~~~~~lD~~~~G~i~~~lk~~~f~GK~Ge~~~l~~~~-~~~~rvllvGLGk~~~~~~~~ 79 (159)
T d1lama2 1 TKGLVLGIYSKEKEEDEPQFTSAGENFNKLVSGKLREILNISGPPLKAGKTRTFYGLH-EDFPSVVVVGLGKKTAGIDEQ 79 (159)
T ss_dssp CEEEEEEECCCCTTCSSCCBCHHHHHHHHHTTTHHHHHHHHTCSCCCTTCEEEEEEEE-TTEEEEEEEECCCTTCCEETT
T ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCC-CCCCEEEEEECCCCCCCCCHH
T ss_conf 9658999973578876444586799987884316899998129988887469850699-985679999527755453489
Q ss_pred -----CH-HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf -----99-9999999999985316974899417789999899999999997147775444436433323
Q gi|254780392|r 83 -----NF-SWLKAGGSIASYIEEDKNIEIFVDVPEYPITKAEIRDLVLGFMLKTYTFDQYKTKKRESSS 145 (494)
Q Consensus 83 -----~~-~~~ra~a~~~~~l~~~~~~~v~i~l~~~~~~~~~~~~~~eG~~L~~Y~Fd~yKskk~~~~~ 145 (494)
.. ..+++.+..++.+.........+... +.+++++||+.|++|+|++|||++++...
T Consensus 80 ~~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~~~------~~a~~~aeg~~L~~Y~F~~yKskkk~~~~ 142 (159)
T d1lama2 80 ENWHEGKENIRAAVAAGCRQIQDLEIPSVEVDPC------GDAQAAAEGAVLGLYEYDDLKQKRKVVVS 142 (159)
T ss_dssp TTEEHHHHHHHHHHHHHHHHHHHTTCSEEEECCT------TCHHHHHHHHHHHHCCCCTTCSSCCCCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHHHHHHCCEECCCCCCCCCCCCC
T ss_conf 9977569999998777878988546753467838------99999999998483752610368999998
No 5
>g1q7l.1 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.05 E-value=0.2 Score=26.91 Aligned_cols=120 Identities=12% Similarity=0.103 Sum_probs=66.3
Q ss_pred HHHHHHHHHCCCCCEEECH--HHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
Q ss_conf 9999864202125403029--999999998-6113321000011100013458988742025778506886205788656
Q gi|254780392|r 176 KGVNLARDIINEPANVLGT--DEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEE 252 (494)
Q Consensus 176 egv~lARDLvN~PaN~ltP--~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~ 252 (494)
+.+.+.|+|+--|+---+| ...++..++ |++.|++++++.... |-+ .++.+|+|..+..
T Consensus 5 ~~v~~l~ellrIpSvsp~~~~~~~~~~l~~~l~~~G~~~~~~~~~~----g~~--------------~v~~~~~g~~~~~ 66 (280)
T g1q7l.1 5 PSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAP----GYV--------------VTVLTWPGTNPTL 66 (280)
T ss_dssp HHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEET----TEE--------------EEEEEECCSSTTS
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC----CCE--------------EEEEEEECCCCCC
T ss_conf 9999999995889999594899999999999998799289997179----974--------------8999973689888
Q ss_pred CCEEEEECCEEECCCC----------CCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCC
Q ss_conf 5126630211200663----------10033----3320023221123568999999998708--787289986410266
Q gi|254780392|r 253 QPLAFIGKGVVFDTGG----------ISIKP----SHGMEEMKGDLGGAAAVTGLLHVLAERK--AKINAIGVLALVENM 316 (494)
Q Consensus 253 ~piaLVGKGvTFDtGG----------islKp----~~~M~~Mk~DM~GaAav~g~~~aia~l~--~~v~v~~~~~~~EN~ 316 (494)
++|.|-|--=|-.-+. .-++- +.|-.+| +||.|+.+.+++++.+.+ ++.+|+.++-..|-.
T Consensus 67 ~~ill~~H~DvvP~~~~~W~~~Pf~~~~~~dg~iyGRGa~D~---K~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~ 143 (280)
T g1q7l.1 67 SSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDM---KCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEV 143 (280)
T ss_dssp CEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTT---HHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGG
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf 869999444532357642122333441112342125665555---40378999999999980898887339999677211
No 6
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=92.79 E-value=0.055 Score=30.79 Aligned_cols=217 Identities=14% Similarity=0.086 Sum_probs=110.1
Q ss_pred HHHHHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 9999864202125403029999999998-611332100001110001345898874202577850688620578865651
Q gi|254780392|r 176 KGVNLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQP 254 (494)
Q Consensus 176 egv~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~p 254 (494)
+-+.+-|+|++.|+=--.-...++..++ |++.|+++++-+ .|. ++....|. ...++
T Consensus 5 e~le~lk~L~~ips~Sg~e~~~~~~i~~~l~~~G~~~~~d~--------~gn--------------iia~~~G~-~~~~~ 61 (233)
T d2grea2 5 ETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNN--------KGA--------------LILTVKGK-NDAQH 61 (233)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEECS--------SSC--------------EEEEECCS-EEEEE
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEC--------CCC--------------EEEEECCC-CCCCC
T ss_conf 99999999984999998899999999999998598599966--------887--------------89971688-86441
Q ss_pred EEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCEEEEEEECCCC-CCCCCCCHHHHHCCC
Q ss_conf 2663021120066310033332002322112356899999999870--8787289986410266-899974707763024
Q gi|254780392|r 255 LAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAER--KAKINAIGVLALVENM-PGSSAQRPGDIVRSM 331 (494)
Q Consensus 255 iaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l--~~~v~v~~~~~~~EN~-~~~~a~~pgdvi~~~ 331 (494)
++|.+ .|++ .|.+|.|+++.+++.+.+. ++|.+|..+.-..|-. -.|.++-+.++
T Consensus 62 i~~~a----------------H~Dt--~dk~g~a~~l~~~~~l~~~~~~~~~~i~~~ft~~EE~G~~Ga~~~~~~~---- 119 (233)
T d2grea2 62 RLLTA----------------HVDT--LDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPEET---- 119 (233)
T ss_dssp EEEEE----------------ECCB--CTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCCCTTE----
T ss_pred EEEEE----------------CCCC--CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCCCC----
T ss_conf 79884----------------1575--5558699999999999977999884599999807433760677522388----
Q ss_pred CCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEE-----CCHHHHHHHHHHHHHHCC
Q ss_conf 895888634786640365236788752079613552111200235431776057870-----898999999998998569
Q gi|254780392|r 332 SGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFA-----NNDVLAEQLLSSGLSTGE 406 (494)
Q Consensus 332 ~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTGa~~~alG~~~~g~~~-----n~~~~~~~~~~a~~~~ge 406 (494)
.|..-+|+++-. -.....|......+. -+..+.+.++++++..+-
T Consensus 120 -----------------------------~~~iavD~~~~~-d~~~~~~~g~~i~~~d~~~~~~~~l~~~l~~~A~~~~I 169 (233)
T d2grea2 120 -----------------------------VEYLAVDMGALG-DGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNHI 169 (233)
T ss_dssp -----------------------------EEEEEECCCCCS-CC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHHTC
T ss_pred -----------------------------CCCEEEEECCCC-CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf -----------------------------510799966578-98788998727997427665699999999999998399
Q ss_pred CCCCCCCCHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 71767768678886179864170188874679999999987238867699940000116788888899865435899999
Q gi|254780392|r 407 LLWRMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKEINQSWASGFGVRLLDE 486 (494)
Q Consensus 407 ~~w~lPl~~~y~~~~~s~~AD~~n~~~~~~g~~~aa~fl~~f~~~~~w~HlDiag~a~~~~~~~~~~~g~tg~~vr~l~~ 486 (494)
++-+ ++.. .+|+ -|+. ++.+-.++|++-|=| |.+........-...----++||..
T Consensus 170 ~~Q~----------------~v~~----~ggT-Da~~-~~~~g~gi~~~~i~~--p~ry~Hs~E~~~~~di~~~~~Ll~a 225 (233)
T d2grea2 170 EYKV----------------DIYP----YYGS-DASA-AIRAGFDVKHALIGA--GIDSSHAFERTHESSIAHTEALVYA 225 (233)
T ss_dssp CEEE----------------EECS----CC----------CCSSSCEEEEEEE--CCBSTTSSEEEEHHHHHHHHHHHHH
T ss_pred CCEE----------------EECC----CCCC-HHHH-HHHHCCCCCEEEECC--CCCCCCCCEECCHHHHHHHHHHHHH
T ss_conf 8579----------------6248----8786-5999-998389997899733--7466654501219999999999999
Q ss_pred HHHHH
Q ss_conf 99976
Q gi|254780392|r 487 FVRAF 491 (494)
Q Consensus 487 ~~~~~ 491 (494)
|+++.
T Consensus 226 ~~~s~ 230 (233)
T d2grea2 226 YVMSN 230 (233)
T ss_dssp HHHSC
T ss_pred HHHCC
T ss_conf 98355
No 7
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]}
Probab=91.25 E-value=0.29 Score=25.71 Aligned_cols=120 Identities=13% Similarity=0.170 Sum_probs=67.0
Q ss_pred HHHHHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 9999864202125403029999999998-611332100001110001345898874202577850688620578865651
Q gi|254780392|r 176 KGVNLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQP 254 (494)
Q Consensus 176 egv~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~p 254 (494)
+-+.+-++|++.|+--=+=...++..++ |++.|+++++ | .+|-+++-=.|....|++++..+-=.-... .
T Consensus 4 ~~~~~l~~l~~i~s~sg~E~~v~~~l~~~l~~~g~~~~~-D-------~~gN~i~~~~g~~~~~~i~l~~H~D~v~~~-~ 74 (275)
T d1vhea2 4 ETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTT-D-------RLGSLIAKKTGAENGPKIMIAGHLDEVPHF-E 74 (275)
T ss_dssp HHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEE-C-------TTCCEEEEEESSTTSCEEEEEEECCCCECC-C
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEE-E-------CCCCEEEEECCCCCCCCEEEECCCCCCCCC-C
T ss_conf 999999999749998988899999999999971998999-1-------798689996688888733462212123566-5
Q ss_pred EEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf 26630211200663100333320023221123568999999998708787289986410266
Q gi|254780392|r 255 LAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENM 316 (494)
Q Consensus 255 iaLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~ 316 (494)
...+-.+.-+-.| +. -|++|.|+.+.+++.+...+++.+|..+....|-.
T Consensus 75 ~~~~~~~~~~~~~--------~~----Dd~~Gva~~l~~~~~l~~~~~~~~v~~~~~~~EE~ 124 (275)
T d1vhea2 75 FTVMNNEKFLLAK--------AW----DNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEV 124 (275)
T ss_dssp CEECSSTTEEEET--------TH----HHHHHHHHHHHHHHHHHTSCCSSEEEEEEESCCTT
T ss_pred CEEEECCCCCCCC--------CC----CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 3364121112247--------66----57637899999999986088876089997415335
No 8
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]}
Probab=88.60 E-value=0.53 Score=23.84 Aligned_cols=115 Identities=14% Similarity=0.090 Sum_probs=64.4
Q ss_pred HHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEE
Q ss_conf 9864202125403029999999998-611332100001110001345898874202577850688620578865651266
Q gi|254780392|r 179 NLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQPLAF 257 (494)
Q Consensus 179 ~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~piaL 257 (494)
.+-|+|++.|+=--.=..+++..++ |++.+.+++. -++|-+++.=.| ..+|+++..-+--.-...... .
T Consensus 4 ~ll~~l~~~~s~sg~E~~~~~~~~~~l~~~~~~v~~--------D~~gNi~~~~~~-~~~~~v~~~~H~D~~~~~~~~-~ 73 (264)
T d1yloa2 4 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRF--------DGLGSVLIRLNE-STGPKVMICAHMDEVFDTTFQ-V 73 (264)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEE--------CTTCCEEEECCC-CSSCEEEEEEECCCCECCCCE-E
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEE--------CCCCCEEEEECC-CCCCEEEEECCCCCCCCCCCE-E
T ss_conf 999999739998958899999999999964998999--------389858999899-887169996576754332320-1
Q ss_pred EECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf 30211200663100333320023221123568999999998708787289986410266
Q gi|254780392|r 258 IGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENM 316 (494)
Q Consensus 258 VGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~ 316 (494)
+..+-. . +.+. -|.+|.|+.+.+++.+...+++.+|+.+.-..|..
T Consensus 74 ~~~~~i--------~-g~a~----D~~~gva~lle~~r~l~~~~~~~~v~~~~~~~EE~ 119 (264)
T d1yloa2 74 LPHQRV--------M-GKAF----DDRLSCYLLVTLLRELHDAELPAEVWLVASSSEEV 119 (264)
T ss_dssp ETTTEE--------E-ETTH----HHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCCTT
T ss_pred CCCCCC--------C-CCCC----CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCC
T ss_conf 156433--------2-6654----46301999999999985478986199999854666
No 9
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}
Probab=84.48 E-value=1.2 Score=21.44 Aligned_cols=117 Identities=15% Similarity=0.176 Sum_probs=58.5
Q ss_pred HHHHHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 9999864202125403029999999998-611332100001110001345898874202577850688620578865651
Q gi|254780392|r 176 KGVNLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQP 254 (494)
Q Consensus 176 egv~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~p 254 (494)
+-+.+.|+|+..|+---.-...|+...+ |++.|++++..+... - .-++.++.+ ..+.
T Consensus 4 e~lell~~Lv~i~S~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~-----~--------------~nv~~~~~~---~~~~ 61 (262)
T d1vgya1 4 QSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGN-----T--------------KNIWLRRGT---KAPV 61 (262)
T ss_dssp HHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTT-----B--------------CEEEEEECS---SSSE
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC-----C--------------CEEEEEECC---CCCE
T ss_conf 99999999958999798979999999999997799389998199-----2--------------579988269---9985
Q ss_pred EEEEECCEEECCCC--------C--CCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHCCC--CCCEEEEEEECC
Q ss_conf 26630211200663--------1--003333200232211-235689999999987087--872899864102
Q gi|254780392|r 255 LAFIGKGVVFDTGG--------I--SIKPSHGMEEMKGDL-GGAAAVTGLLHVLAERKA--KINAIGVLALVE 314 (494)
Q Consensus 255 iaLVGKGvTFDtGG--------i--slKp~~~M~~Mk~DM-~GaAav~g~~~aia~l~~--~v~v~~~~~~~E 314 (494)
++|.|-==|..-|. . .++-+.-.-.--+|| +|-|+.+.+++++.+.+. +.+++.++...|
T Consensus 62 l~l~~H~DtVp~g~~~~w~~~p~~~~~~dg~iyGrGa~D~Kg~~a~~l~a~~~l~~~~~~~~~~~~l~~~~dE 134 (262)
T d1vgya1 62 VCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDE 134 (262)
T ss_dssp EEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCS
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf 9887624423678653433466662998174575044146634799999999999736467887599999657
No 10
>d2hgaa1 b.36.1.6 (A:23-125) Uncharacterized protein MTH1368 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=79.18 E-value=0.24 Score=26.27 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=39.6
Q ss_pred EEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 9986410266899974707763024895888634786640365236788752079613552111200
Q gi|254780392|r 307 IGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLATLTG 373 (494)
Q Consensus 307 ~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~ATLTG 373 (494)
+-+-...+|+|..++.+|||+|++.||+.|. +. .|-..+ ...++|...|.+-..-+
T Consensus 5 v~V~~V~~~sPA~~~L~~GD~I~~ing~~v~----~~------~~l~~~-i~~~~~G~~v~l~v~R~ 60 (103)
T d2hgaa1 5 VQIDSVVPGSPASKVLTPGLVIESINGMPTS----NL------TTYSAA-LKTISVGEVINITTDQG 60 (103)
T ss_dssp EEEEEECSSSGGGGTSCTTCEEEEETTEECS----SH------HHHHHH-HTTCCTTCEEEEEETTE
T ss_pred EEEEEECCCCHHHHCCCCCCEEEEECCEECC----CH------HHHHHH-HHHCCCCCEEEEEEEEC
T ss_conf 7999988999379568878799998998849----99------999999-86179989999999989
No 11
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]}
Probab=76.03 E-value=2.2 Score=19.54 Aligned_cols=121 Identities=16% Similarity=0.153 Sum_probs=68.5
Q ss_pred HHHHHHHHHHCCCCCEEECHHHH---HHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
Q ss_conf 99999864202125403029999---999998-61133210000111000134589887420257785068862057886
Q gi|254780392|r 175 VKGVNLARDIINEPANVLGTDEF---CKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDS 250 (494)
Q Consensus 175 aegv~lARDLvN~PaN~ltP~~l---A~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~ 250 (494)
.+-+.+-|+|++.|+---+++.. ++...+ |++.|++++..+...... ..-++.+++|.+
T Consensus 16 ~~~i~~L~~lv~i~S~s~~~~~~~~~a~~l~~~l~~lG~~~~~~~~~~~~~----------------~~nv~a~~~g~~- 78 (276)
T d1cg2a1 16 PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVV----------------GDNIVGKIKGRG- 78 (276)
T ss_dssp HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCC----------------SEEEEEEEECSS-
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC----------------CCEEEEEECCCC-
T ss_conf 999999999967999897989999999999999997799599994589776----------------787999988999-
Q ss_pred CCCCEEEEECCEE-ECCCCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHCCC--CCCEEEEEEECCCC
Q ss_conf 5651266302112-0066310033---------33200232211235689999999987087--87289986410266
Q gi|254780392|r 251 EEQPLAFIGKGVV-FDTGGISIKP---------SHGMEEMKGDLGGAAAVTGLLHVLAERKA--KINAIGVLALVENM 316 (494)
Q Consensus 251 ~~~piaLVGKGvT-FDtGGislKp---------~~~M~~Mk~DM~GaAav~g~~~aia~l~~--~v~v~~~~~~~EN~ 316 (494)
.++|.|.|-==| |..|...--| +.|-.+| .+|.|+.+.+++++.+.+. +.+|..++-..|-.
T Consensus 79 -~~~vll~~H~DtV~~~~~w~~~Pf~~~~~~l~G~G~~D~---k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 152 (276)
T d1cg2a1 79 -GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADD---KGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEK 152 (276)
T ss_dssp -CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTT---HHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGG
T ss_pred -CCEEEEEECCCCCCCCCCCCCCCCEEECCEEEECCCCCC---CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf -984999806242233554677862353680341231355---55499999999999970877788879999746124
No 12
>d1sota1 b.36.1.4 (A:255-353) Stress sensor protease DegS, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=74.23 E-value=0.39 Score=24.77 Aligned_cols=51 Identities=14% Similarity=0.159 Sum_probs=33.8
Q ss_pred EEEEECCCCCCCCC-CCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEEC
Q ss_conf 98641026689997-470776302489588863478664036523678875207961355211
Q gi|254780392|r 308 GVLALVENMPGSSA-QRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLA 369 (494)
Q Consensus 308 ~~~~~~EN~~~~~a-~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~A 369 (494)
-+.-..+|.|..+| .+|||||++.||+.|. |.+ |...+ ..+.+|..-+.+-
T Consensus 29 ~V~~V~~~spA~~aGl~~GDiI~~ing~~v~--~~~--------~l~~~-l~~~~~g~~v~l~ 80 (99)
T d1sota1 29 VVNEVSPDGPAANAGIQVNDLIISVDNKPAI--SAL--------ETMDQ-VAEIRPGSVIPVV 80 (99)
T ss_dssp ECCCCCSSSTTTSSSCCTTCEECBSSSSBCC--CSH--------HHHHH-HHHSCTTCEEEEC
T ss_pred EEEEECCCCCHHHCCCCCCEEEEEECCEECC--CHH--------HHHHH-HHCCCCCCEEEEE
T ss_conf 8989269989789399851389999999246--377--------89999-9708999999999
No 13
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=68.31 E-value=3.2 Score=18.34 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=86.1
Q ss_pred HHHHHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE-EECCCCCCCCCCE
Q ss_conf 99864202125403029999999998-611332100001110001345898874202577850688-6205788656512
Q gi|254780392|r 178 VNLARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAV-MKWEGGDSEEQPL 255 (494)
Q Consensus 178 v~lARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~-l~Y~g~~~~~~pi 255 (494)
..+-++|++.|+=--+=...++..++ |++++..+++ -.+|-+++.=+|... |++++ -+|---
T Consensus 4 ~~~l~~l~~~~~~sg~E~~v~~~i~~~l~~~~~~~~~--------d~~gNvia~~~g~~~-~~i~l~aH~D~v------- 67 (248)
T d1vhoa2 4 GKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKT--------TRHGSLIGYKKGKGI-GKLAFFAHVDEI------- 67 (248)
T ss_dssp HHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEE--------CTTSCEEEEECCSSS-CEEEEEEECCBC-------
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEE--------ECCCCEEEEECCCCC-CEEEEECCCCCE-------
T ss_conf 9999999669999987899999999999971997999--------158968999627777-327873011121-------
Q ss_pred EEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCE
Q ss_conf 66302112006631003333200232211235689999999987087872899864102668999747077630248958
Q gi|254780392|r 256 AFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQT 335 (494)
Q Consensus 256 aLVGKGvTFDtGGislKp~~~M~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi~~~~G~t 335 (494)
+-...|..+| .+.+. + --|.+|.|+++-+++.+...+++.+|..+.-..|-. +.
T Consensus 68 ---~~~~~~~~~~-~~~~~-a----~Dd~~G~a~~l~~~~~l~~~~~~~~v~~~~~~~EE~-G~---------------- 121 (248)
T d1vhoa2 68 ---IDQTAFETNG-KVVGK-A----LDNRASCGVLVKVLEFLKRYDHPWDVYVVFSVQEET-GC---------------- 121 (248)
T ss_dssp ---ECCCCEEETT-EEEET-T----HHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECTTSS-SH----------------
T ss_pred ---ECCCCCCCCC-CEECC-C----CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC-CC----------------
T ss_conf ---0356632477-04115-7----764073899999999973137777449998631557-88----------------
Q ss_pred EEEECCCCCCEEEEEHHHHHHHHHCCCCEEE--EECCCC---HHHHHHCCCCCEEE--EECCHHHHHHHHHHHHHHCCCC
Q ss_conf 8863478664036523678875207961355--211120---02354317760578--7089899999999899856971
Q gi|254780392|r 336 IEVINTDAEGRLILADALWYCRTHYNPHLMI--DLATLT---GAMVVSLGNIYAGL--FANNDVLAEQLLSSGLSTGELL 408 (494)
Q Consensus 336 vei~nTDAEGRlvLaD~l~ya~~~~~p~~ii--d~ATLT---Ga~~~alG~~~~g~--~~n~~~~~~~~~~a~~~~ge~~ 408 (494)
-=+..++ ..++|+..+ |+.+-. |.-..-+|...... ..-+..+.+.+.+.++..+-++
T Consensus 122 --------------~Ga~~~~-~~~~~~~~~~~d~~~~~d~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~a~~~~i~~ 186 (248)
T d1vhoa2 122 --------------LGALTGA-YEINPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSL 186 (248)
T ss_dssp --------------HHHHHTT-CCCCCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCC
T ss_pred --------------CCCEEHH-HCCCCCCCCEECEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf --------------7611110-0133210000000114467887631246335872266589899999999998607764
No 14
>d1ky9a1 b.36.1.4 (A:260-353) Protease Do (DegP, HtrA), C-terminal domains {Escherichia coli [TaxId: 562]}
Probab=67.23 E-value=0.99 Score=21.97 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=29.4
Q ss_pred HHCCCC-CCEEEEEEECCCCCCCCC-CCHHHHHCCCCCCEEE
Q ss_conf 870878-728998641026689997-4707763024895888
Q gi|254780392|r 298 AERKAK-INAIGVLALVENMPGSSA-QRPGDIVRSMSGQTIE 337 (494)
Q Consensus 298 a~l~~~-v~v~~~~~~~EN~~~~~a-~~pgdvi~~~~G~tve 337 (494)
..++++ .+=+-+.-..+|.|...| .++||||++.||+.|+
T Consensus 19 ~~~gl~~~~Gv~V~~V~~~spA~~aGl~~gDvI~~i~g~~v~ 60 (94)
T d1ky9a1 19 KAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPIS 60 (94)
T ss_dssp HTSCCTTCCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCC
T ss_pred HHCCCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEECCEEEC
T ss_conf 984999888769998788714787187754079999998808
No 15
>d2z9ia1 b.36.1.4 (A:227-314) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=64.97 E-value=0.9 Score=22.25 Aligned_cols=52 Identities=15% Similarity=0.218 Sum_probs=34.3
Q ss_pred EEEEEECCCCCCCCC-CCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEEC
Q ss_conf 998641026689997-470776302489588863478664036523678875207961355211
Q gi|254780392|r 307 IGVLALVENMPGSSA-QRPGDIVRSMSGQTIEVINTDAEGRLILADALWYCRTHYNPHLMIDLA 369 (494)
Q Consensus 307 ~~~~~~~EN~~~~~a-~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya~~~~~p~~iid~A 369 (494)
+-+.-..+|.|..+| .+|||+|++-||..|+ |. .| +..+....+|.--|.+-
T Consensus 18 v~V~~V~~~spA~~aGl~~GD~I~~ing~~i~--~~--------~~-~~~~i~~~~~g~~v~l~ 70 (88)
T d2z9ia1 18 AKIVEVVAGGAAANAGVPKGVVVTKVDDRPIN--SA--------DA-LVAAVRSKAPGATVALT 70 (88)
T ss_dssp EEEEEECTTSTTGGGTCCTTCEEEEETTEECC--SH--------HH-HHHHHHTSCTTCEEEEE
T ss_pred EEEEEECCCCHHHHCCCCCCCEEEEECCCCCC--CH--------HH-HHHHHHHCCCCCEEEEE
T ss_conf 99999899998999699999998992999377--58--------99-99999707997999999
No 16
>d1ky9b2 b.36.1.4 (B:359-446) Protease Do (DegP, HtrA), C-terminal domains {Escherichia coli [TaxId: 562]}
Probab=54.78 E-value=0.77 Score=22.74 Aligned_cols=29 Identities=17% Similarity=0.361 Sum_probs=23.5
Q ss_pred EEEECCCCCCCCC-CCHHHHHCCCCCCEEE
Q ss_conf 8641026689997-4707763024895888
Q gi|254780392|r 309 VLALVENMPGSSA-QRPGDIVRSMSGQTIE 337 (494)
Q Consensus 309 ~~~~~EN~~~~~a-~~pgdvi~~~~G~tve 337 (494)
+.-..+|.|..+| .+|||||.+.||+.|+
T Consensus 29 V~~V~~~spA~~aGl~~GDvI~~ing~~v~ 58 (88)
T d1ky9b2 29 VNNVKTGTPAAQIGLKKGDVIIGANQQAVK 58 (88)
T ss_dssp BCCCCSSCTTGGGTCCSSCEEEEETTEECS
T ss_pred EEEECCCCHHHHCCCCCCCEEEEECCEECC
T ss_conf 999899998998499888699999998858
No 17
>d1lcya1 b.36.1.4 (A:226-325) Mitochondrial serine protease HtrA2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.36 E-value=0.6 Score=23.51 Aligned_cols=31 Identities=23% Similarity=0.504 Sum_probs=24.5
Q ss_pred EEEEEECCCCCCCCC-CCHHHHHCCCCCCEEE
Q ss_conf 998641026689997-4707763024895888
Q gi|254780392|r 307 IGVLALVENMPGSSA-QRPGDIVRSMSGQTIE 337 (494)
Q Consensus 307 ~~~~~~~EN~~~~~a-~~pgdvi~~~~G~tve 337 (494)
+.+....+|+|...| .+|||||++.||+.|.
T Consensus 33 v~V~~V~~~spA~~aGl~~GDiI~~ing~~V~ 64 (100)
T d1lcya1 33 VLIHKVILGSPAHRAGLRPGDVILAIGEQMVQ 64 (100)
T ss_dssp EEEEEECTTSHHHHHTCCTTCEEEEETTEECC
T ss_pred EEEEEECCCCHHHHCCCCCCCEEEEECCEECC
T ss_conf 89999888965766599998499999999968
No 18
>d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal processing protease {Algae (Scenedesmus obliquus) [TaxId: 3088]}
Probab=52.52 E-value=0.71 Score=22.96 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=23.9
Q ss_pred EEEEEECCCCCCCCC-CCHHHHHCCCCCCEEE
Q ss_conf 998641026689997-4707763024895888
Q gi|254780392|r 307 IGVLALVENMPGSSA-QRPGDIVRSMSGQTIE 337 (494)
Q Consensus 307 ~~~~~~~EN~~~~~a-~~pgdvi~~~~G~tve 337 (494)
+.++...+|.|..+| .+|||+|.+-||+.|+
T Consensus 21 v~V~~v~~gsPA~~AGl~~GD~I~~Ing~~v~ 52 (92)
T d1fc6a3 21 VVVLTPAPGGPAEKAGARAGDVIVTVDGTAVK 52 (92)
T ss_dssp EEEEEECTTSHHHHTTCCTTCEEEEETTEECT
T ss_pred EEEEEECCCCCHHHHHHHCCCCCEECCCEECC
T ss_conf 99998069798648766759851303745867
No 19
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]}
Probab=49.28 E-value=1.8 Score=20.07 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=34.1
Q ss_pred HHHHCCCCCEEECHHHHHHHHHH-HHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf 64202125403029999999998-611332100001110001345898874202577850688620
Q gi|254780392|r 181 ARDIINEPANVLGTDEFCKQVRK-LESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKW 245 (494)
Q Consensus 181 ARDLvN~PaN~ltP~~lA~~a~~-l~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y 245 (494)
-++|++.|+=-=.=...++.+++ |++.++++++ | .||-+++.=+|....|+++..-+
T Consensus 3 l~~l~~i~s~sg~E~~v~~~~~~~l~~~g~~v~~-d-------~~gNii~~~~G~~~~~~i~l~aH 60 (255)
T d2fvga2 3 LKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYT-D-------VLGNLIALKRGRDSSKKLLVSAH 60 (255)
T ss_dssp HHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEE-C-------TTSCEEEEECCSEEEEEEEEEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEE-E-------CCCCEEEEECCCCCCCCEEEEEC
T ss_conf 8998459998999899999999999972996999-5-------79979999668888985589721
No 20
>d2aiba1 a.134.1.1 (A:1-98) beta-cinnamomin {Fungus (Phytophthora cinnamomi) [TaxId: 4785]}
Probab=41.59 E-value=8.6 Score=15.33 Aligned_cols=39 Identities=13% Similarity=0.208 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCCC---HHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0663100333320---0232211235689999999987087872
Q gi|254780392|r 265 DTGGISIKPSHGM---EEMKGDLGGAAAVTGLLHVLAERKAKIN 305 (494)
Q Consensus 265 DtGGislKp~~~M---~~Mk~DM~GaAav~g~~~aia~l~~~v~ 305 (494)
|| |+|+=|..++ ++|+. ||.+.+....+..+..+++|--
T Consensus 30 dS-Gys~~~~~~~PT~~q~~~-MCaS~aC~~Li~~v~al~p~DC 71 (98)
T d2aiba1 30 DS-GYSMLTATALPTNAQYKL-MCASTACNTMIKKIVALNPPDC 71 (98)
T ss_dssp HH-SCCTTTCSSCCCHHHHHH-HHHCHHHHHHHHHHHHTCCCSS
T ss_pred CC-CCEECCCCCCCCHHHHHH-HHCCHHHHHHHHHHHHCCCCCC
T ss_conf 67-821124778999899999-8242999999999982899772
No 21
>d1sroa_ b.40.4.5 (A:) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Escherichia coli [TaxId: 562]}
Probab=40.77 E-value=7 Score=15.95 Aligned_cols=47 Identities=15% Similarity=0.259 Sum_probs=31.6
Q ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEE
Q ss_conf 872899864102668999747077630248958886347866403652
Q gi|254780392|r 303 KINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILA 350 (494)
Q Consensus 303 ~v~v~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLa 350 (494)
.-++.|++|..|-+. ..--+|.|+++--.=..+.|.+.|.|||+.|.
T Consensus 26 ~~~~~Glv~~sels~-~~~~~~~~~~~~G~~v~v~Vi~id~~~ri~LS 72 (76)
T d1sroa_ 26 GGGKEGLVHISQIAD-KRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLS 72 (76)
T ss_dssp SSSCCCBCCTTSSCS-SCCSCHHHHCCTTCEEEEEEEECCTTCCCEEE
T ss_pred CCCCEEEEEHHHHCC-CCCCCHHHCCCCCCEEEEEEEEECCCCCEEEE
T ss_conf 789789987277276-65479878128999999999999999988999
No 22
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.88 E-value=8.5 Score=15.35 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=28.9
Q ss_pred EEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEHHHHHH
Q ss_conf 99864102668999747077630248958886347866403652367887
Q gi|254780392|r 307 IGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILADALWYC 356 (494)
Q Consensus 307 ~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLaD~l~ya 356 (494)
+.|--..++.|...+.+|||.|-+-||..++= +...+++..-
T Consensus 45 I~I~~V~~gs~A~~~L~~GD~Il~VNg~~v~~--------~t~~eav~~l 86 (103)
T d2h3la1 45 IFVTRVQPEGPASKLLQPGDKIIQANGYSFIN--------IEHGQAVSLL 86 (103)
T ss_dssp EEEEEECTTSTTTTTCCTTCEEEEETTEECSS--------CCHHHHHHHH
T ss_pred EEEEEECCCCHHHHCCCCCCEEEEECCEECCC--------CCHHHHHHHH
T ss_conf 89999689994785567899999998998789--------9899999999
No 23
>d2ba0a1 b.40.4.5 (A:53-135) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.79 E-value=12 Score=14.28 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=26.6
Q ss_pred CCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEE
Q ss_conf 72899864102668999747077630248958886347866403652
Q gi|254780392|r 304 INAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILA 350 (494)
Q Consensus 304 v~v~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLa 350 (494)
-++.|++|..|-.-......|-++++-=.=..+.|.+-|.++|+.|.
T Consensus 27 ~~~~g~l~~se~s~~~~~~~~~~~~~vGd~V~~kV~~vd~~~~i~LS 73 (83)
T d2ba0a1 27 SPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIAKVLNIDPKMKVTLT 73 (83)
T ss_dssp SSSCEEEEGGGCTTCCTTSCGGGTCCTTCEEEEEEEEECTTCCEEEE
T ss_pred CCEEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEE
T ss_conf 99468876203046333357335224566799999999999988998
No 24
>d1hh2p1 b.40.4.5 (P:127-198) S1 domain of NusA {Thermotoga maritima [TaxId: 2336]}
Probab=31.33 E-value=12 Score=14.23 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=29.4
Q ss_pred CEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEE
Q ss_conf 289986410266899974707763024895888634786640365
Q gi|254780392|r 305 NAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLIL 349 (494)
Q Consensus 305 ~v~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvL 349 (494)
++-+++|--| ++.+..|+|||-|+.+= .||.++.-...++|
T Consensus 30 ~~eaiLp~~e-qip~E~~~~Gdrik~~i---~~V~~~~kgpqI~l 70 (72)
T d1hh2p1 30 KLETRLPKKE-WIPGEEIKAGDLVKVYI---IDVVKTTKGPKILV 70 (72)
T ss_dssp TEEEEEEGGG-SCTTCCCCTTCEEEEEE---EEEEEETTEEEEEE
T ss_pred CCEEECCHHH-CCCCCCCCCCCEEEEEE---EEEEECCCCCEEEE
T ss_conf 9178789899-59887899999899999---99987699886998
No 25
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C, EpsC {Vibrio cholerae [TaxId: 666]}
Probab=26.57 E-value=4.6 Score=17.26 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=15.9
Q ss_pred EEECCCCCC-CCCCCHHHHHCCCCCCEEE
Q ss_conf 641026689-9974707763024895888
Q gi|254780392|r 310 LALVENMPG-SSAQRPGDIVRSMSGQTIE 337 (494)
Q Consensus 310 ~~~~EN~~~-~~a~~pgdvi~~~~G~tve 337 (494)
.+..+++|- -.-.+|||||++.||+.|.
T Consensus 24 ~~v~~~s~~~~aGl~~GDiI~~ing~~v~ 52 (87)
T d2i6va1 24 SPGKDPVLFESIGLQDGDMAVALNGLDLT 52 (87)
T ss_dssp EECSCHHHHHHTTCCTTCEEEEETTEETT
T ss_pred ECCCCCCHHHHCCCCCCCEEEEECCEEEE
T ss_conf 42799998998799989999999999940
No 26
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]}
Probab=26.15 E-value=14 Score=13.86 Aligned_cols=16 Identities=31% Similarity=0.412 Sum_probs=12.6
Q ss_pred CCCCCCEEEEECCCCC
Q ss_conf 0248958886347866
Q gi|254780392|r 329 RSMSGQTIEVINTDAE 344 (494)
Q Consensus 329 ~~~~G~tvei~nTDAE 344 (494)
--..|+--||+|||++
T Consensus 47 vp~~G~~~~ilNTD~~ 62 (106)
T d1m7xa2 47 INQPGKWREILNTDSM 62 (106)
T ss_dssp CSSCSEEEEEEETTST
T ss_pred CCCCCEEEEEECCCCC
T ss_conf 8999759999868753
No 27
>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}
Probab=25.66 E-value=15 Score=13.57 Aligned_cols=34 Identities=32% Similarity=0.245 Sum_probs=17.1
Q ss_pred HHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCC
Q ss_conf 99987087872899864102668999747077630248
Q gi|254780392|r 295 HVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMS 332 (494)
Q Consensus 295 ~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi~~~~ 332 (494)
.++.+|+++ ||..+-.-+||+.....| ||||++.
T Consensus 107 ~~~~~L~L~-nv~v~~~R~E~~~~~~~f---D~V~sRA 140 (207)
T d1jsxa_ 107 QVQHELKLE-NIEPVQSRVEEFPSEPPF---DGVISRA 140 (207)
T ss_dssp HHHHHTTCS-SEEEEECCTTTSCCCSCE---EEEECSC
T ss_pred HHHHHCCCC-CEEEECCCHHHHCCCCCC---CEEHHHH
T ss_conf 999873984-001101304440555330---0001213
No 28
>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.02 E-value=4.8 Score=17.08 Aligned_cols=13 Identities=46% Similarity=0.646 Sum_probs=9.1
Q ss_pred CCCCCHHHHHCCC
Q ss_conf 9974707763024
Q gi|254780392|r 319 SSAQRPGDIVRSM 331 (494)
Q Consensus 319 ~~a~~pgdvi~~~ 331 (494)
.++|||||||++.
T Consensus 59 ~~~fr~GDiV~A~ 71 (125)
T d2nn6i1 59 YKSFRPGDIVLAK 71 (125)
T ss_dssp GGTCCSSSEEEEE
T ss_pred HHHCCCCCEEEEE
T ss_conf 8756889889999
No 29
>d1l1ca_ b.35.2.1 (A:) LicT {Bacillus subtilis [TaxId: 1423]}
Probab=23.90 E-value=13 Score=14.02 Aligned_cols=14 Identities=29% Similarity=0.797 Sum_probs=10.4
Q ss_pred CCEEEEECCEEECC
Q ss_conf 51266302112006
Q gi|254780392|r 253 QPLAFIGKGVVFDT 266 (494)
Q Consensus 253 ~piaLVGKGvTFDt 266 (494)
+-+.++||||-|-.
T Consensus 20 ~E~Iv~GkGIGF~k 33 (55)
T d1l1ca_ 20 KELVVMGRGLAFQK 33 (55)
T ss_dssp CEEEEECSSSSTTC
T ss_pred CEEEEEECCCEECC
T ss_conf 99999972613477
No 30
>d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]}
Probab=23.80 E-value=16 Score=13.33 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=54.1
Q ss_pred CHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEE--ECCEE----------ECCCCCCCCCCCCC
Q ss_conf 1000011100013458988742025778506886205788656512663--02112----------00663100333320
Q gi|254780392|r 210 AVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQPLAFI--GKGVV----------FDTGGISIKPSHGM 277 (494)
Q Consensus 210 ~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~piaLV--GKGvT----------FDtGGislKp~~~M 277 (494)
-+++||++. +.+-+ +=.+|.+-..+|--|+.=.|.-.. .+++| |+|+. |-+-.-+- ....
T Consensus 23 ~~E~~d~~~-~qlqc-agV~~~r~~I~p~gL~lP~y~~a~----~i~yV~qG~G~~g~v~pgc~et~~~~~~~~--~~~~ 94 (239)
T d1fxza1 23 LIETWNPNN-KPFQC-AGVALSRCTLNRNALRRPSYTNGP----QEIYIQQGKGIFGMIYPGCPSTFEEPQQPQ--QRGQ 94 (239)
T ss_dssp EEEECCTTS-HHHHH-HTCEEEEEEECTTEEEEEEEESSC----EEEEEEECCEEEEEECTTCCCC--------------
T ss_pred EEEECCCCC-HHHHH-CCCHHHEEEECCCCEECCEECCCC----EEEEEEECEEEEEEECCCCHHHHCCCCCCC--CCCC
T ss_conf 588659897-03310-450010333236732055032897----289998377999995589801320510024--4444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEE
Q ss_conf 0232211235689999999987087872899864102668999747077630248958886347866403652
Q gi|254780392|r 278 EEMKGDLGGAAAVTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILA 350 (494)
Q Consensus 278 ~~Mk~DM~GaAav~g~~~aia~l~~~v~v~~~~~~~EN~~~~~a~~pgdvi~~~~G~tvei~nTDAEGRlvLa 350 (494)
.....|. + =--.-+|+|||+....|.+.=+.|++-| +|++-
T Consensus 95 ~~~~~d~----------------~---------------qk~~~lr~GDVi~iPAG~~~w~~N~gn~-~Lv~v 135 (239)
T d1fxza1 95 SSRPQDR----------------H---------------QKIYNFREGDLIAVPTGVAWWMYNNEDT-PVVAV 135 (239)
T ss_dssp ------C----------------C---------------CCEEEECTTEEEEECTTCEEEEEECSSS-CEEEE
T ss_pred CCCCCHH----------------H---------------HHHHCCCCCCEEEECCCCEEEEEECCCC-CEEEE
T ss_conf 4453100----------------2---------------3542556677899568842899837998-58999
No 31
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}
Probab=22.60 E-value=17 Score=13.17 Aligned_cols=102 Identities=22% Similarity=0.198 Sum_probs=53.3
Q ss_pred EEEEEECCCCCCCCCCEEEEECCEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--CCCEEEEEEECCC
Q ss_conf 0688620578865651266302112006631003-333200232211235689999999987087--8728998641026
Q gi|254780392|r 239 YLAVMKWEGGDSEEQPLAFIGKGVVFDTGGISIK-PSHGMEEMKGDLGGAAAVTGLLHVLAERKA--KINAIGVLALVEN 315 (494)
Q Consensus 239 rli~l~Y~g~~~~~~piaLVGKGvTFDtGGislK-p~~~M~~Mk~DM~GaAav~g~~~aia~l~~--~v~v~~~~~~~EN 315 (494)
+=|+.+..|....+ +.++|| =-|||=+.+-. +.....+=--|-+|-|++|.+++.+.+.+. +.+|+.+.=..|-
T Consensus 76 ~Nvi~~~~G~~~~~-~~ivv~--aH~Ds~~~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~i~f~~~~~EE 152 (291)
T d1rtqa_ 76 KSVVMTITGSEAPD-EWIVIG--GHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEE 152 (291)
T ss_dssp EEEEEEECCSSEEE-EEEEEE--EECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGG
T ss_pred CCEEEEECCCCCCC-CEEEEE--EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
T ss_conf 53799956888988-889997--304788987767777889975634659999999999998525876745885016611
Q ss_pred --CCCCCCCCHHHHHCCCCCCEEEEECCCCCC
Q ss_conf --689997470776302489588863478664
Q gi|254780392|r 316 --MPGSSAQRPGDIVRSMSGQTIEVINTDAEG 345 (494)
Q Consensus 316 --~~~~~a~~pgdvi~~~~G~tvei~nTDAEG 345 (494)
+.++.+|-- -...-.-+.+-++|-|.-|
T Consensus 153 ~Gl~GS~~~~~--~~~~~~~~i~~~inlDmvg 182 (291)
T d1rtqa_ 153 VGLRGSQDLAN--QYKSEGKNVVSALQLDMTN 182 (291)
T ss_dssp GTSHHHHHHHH--HHHHTTCEEEEEEECSCCS
T ss_pred HHCCCCHHHHH--HHHHHCCHHHHHHHHHHCC
T ss_conf 43057089987--3222200134443432036
No 32
>d1e3pa2 b.40.4.5 (A:656-717) S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase {Streptomyces antibioticus [TaxId: 1890]}
Probab=22.03 E-value=7 Score=15.95 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=27.1
Q ss_pred CCCEEEEEEECCCCCCC---CCCCHHHHHCCCCCCEEEEECCCCCCE
Q ss_conf 87289986410266899---974707763024895888634786640
Q gi|254780392|r 303 KINAIGVLALVENMPGS---SAQRPGDIVRSMSGQTIEVINTDAEGR 346 (494)
Q Consensus 303 ~v~v~~~~~~~EN~~~~---~a~~pgdvi~~~~G~tvei~nTDAEGR 346 (494)
.-.+.|+++.-|=..+. .--.|.|+++--.-.++.|++-|.|||
T Consensus 16 ~~g~~Glihiseis~~~~~~~v~~~~~~~~~G~~V~vkV~~iD~~~r 62 (62)
T d1e3pa2 16 LPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGK 62 (62)
T ss_dssp C---CCCCC-------------------CCSSCBCCCCCCCCCSSCC
T ss_pred CCCCEEEEEHHHCCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCC
T ss_conf 69936799989916343664106988826899999999999868999
No 33
>d2gl5a1 c.1.11.2 (A:123-400) Putative dehydratase protein STM2273 {Salmonella typhimurium [TaxId: 90371]}
Probab=21.00 E-value=19 Score=12.95 Aligned_cols=85 Identities=7% Similarity=0.024 Sum_probs=30.7
Q ss_pred HHCCCCCEEECHHHHHHHHHHH-HCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECC
Q ss_conf 2021254030299999999986-113321000011100013458988742025778506886205788656512663021
Q gi|254780392|r 183 DIINEPANVLGTDEFCKQVRKL-ESLGVAVEILDKEAMHKLGMNALLAVAQGSSRPPYLAVMKWEGGDSEEQPLAFIGKG 261 (494)
Q Consensus 183 DLvN~PaN~ltP~~lA~~a~~l-~~~gl~v~Vld~~~L~klGMg~llaVgqGS~~~Prli~l~Y~g~~~~~~piaLVGKG 261 (494)
|.++.-...|.=-.-+.++..+ +.+|+.|....-.- +.+...++--++.. |.+..+||....-....--|+-..
T Consensus 170 di~~~d~~~~GGit~~~kia~la~~~gi~v~~H~~~~----~i~~~a~~hl~aa~-~n~~~~e~~~~~~~~~~~~l~~~~ 244 (278)
T d2gl5a1 170 AVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVCGG----PVSTVAALHMETAI-PNFIIHEHHTNAMKASIRELCTHD 244 (278)
T ss_dssp SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCSS----HHHHHHHHHHHHHC-TTBCCEEEETTTTCHHHHTTBSSC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC----CHHHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHCCCC
T ss_conf 2675312100563667776545544033445656667----50110013444146-761464012541156677633589
Q ss_pred EEECCCCCCCC
Q ss_conf 12006631003
Q gi|254780392|r 262 VVFDTGGISIK 272 (494)
Q Consensus 262 vTFDtGGislK 272 (494)
+.+.-|-+.+-
T Consensus 245 ~~~~~G~~~~p 255 (278)
T d2gl5a1 245 YQPENGYYVAP 255 (278)
T ss_dssp CCCBTTEECCC
T ss_pred CEEECCEEECC
T ss_conf 80368889899
No 34
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.81 E-value=19 Score=12.93 Aligned_cols=13 Identities=38% Similarity=0.373 Sum_probs=8.6
Q ss_pred CCCEEEEEECCCH
Q ss_conf 7445999944881
Q gi|254780392|r 67 VWDRLVVAGIGDP 79 (494)
Q Consensus 67 ~~~rViLVGLG~~ 79 (494)
.-+.|++||-|+.
T Consensus 33 rgk~V~VvGgGds 45 (130)
T d1vdca2 33 RNKPLAVIGGGDS 45 (130)
T ss_dssp TTSEEEEECCSHH
T ss_pred CCCEEEEECCCHH
T ss_conf 7988999738358
No 35
>d1k32a1 b.36.1.3 (A:763-853) Tricorn protease {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.12 E-value=6.9 Score=16.00 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=15.7
Q ss_pred CCCCCCCCC--CHHHHHCCCCCCEEE
Q ss_conf 266899974--707763024895888
Q gi|254780392|r 314 ENMPGSSAQ--RPGDIVRSMSGQTIE 337 (494)
Q Consensus 314 EN~~~~~a~--~pgdvi~~~~G~tve 337 (494)
|+.|-..|- ||||+|++-||+.|.
T Consensus 29 ~~sPa~~aGl~k~GD~I~~IdG~~v~ 54 (91)
T d1k32a1 29 EKSPIFEYGIDPTGYLIEDIDGETVG 54 (91)
T ss_dssp CBCGGGGGTCCCTTCEEEEETTEECB
T ss_pred CCCHHHHCCCCCCCCEEEEECCEEEC
T ss_conf 48954853799999999997788504
Done!