PSIBLAST alignment of GI: 254780392 and protein with PDB id: 1gyt
gi|21730291|pdb|1GYT|A Chain A, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730292|pdb|1GYT|B Chain B, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730293|pdb|1GYT|C Chain C, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730294|pdb|1GYT|D Chain D, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730295|pdb|1GYT|E Chain E, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730296|pdb|1GYT|F Chain F, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730297|pdb|1GYT|G Chain G, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730298|pdb|1GYT|H Chain H, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730299|pdb|1GYT|I Chain I, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730300|pdb|1GYT|J Chain J, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730301|pdb|1GYT|K Chain K, E. Coli Aminopeptidase A (Pepa) Length = 503
>gi|21730302|pdb|1GYT|L Chain L, E. Coli Aminopeptidase A (Pepa) Length = 503
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 167/503 (33%), Positives = 266/503 (52%), Gaps = 17/503 (3%)
Query: 1 MDIKFSFAKNPSIKQEGLAILLKT--SFSDVAGLSLIGSPSIVMRAVSVKNFIGESKSHL 58
M+ + + + + S +A S + + G+ L
Sbjct: 1 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL 60
Query: 59 NILAPVDCVWDRLVVAGIGDPRDANFSWLK-AGGSIASYIEEDKNIEIFVDVPEYPITK- 116
+ + + +R+++ G G R+ + K + + + ++E + E +
Sbjct: 61 LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR 120
Query: 117 ---AEIRDLVLGFMLKTYTFDQYKTKKRESSSPRSKENISVTIVTEMIQQSSQVVADIQS 173
++R V Y+FDQ KT K E P K +V E+ + + +
Sbjct: 121 NNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSG-ERAIQHGLA 179
Query: 174 VVKGVNLARDIINEPANVLGTDEFCKQVRKLESLGVAV---EILDKEAMHKLGMNALLAV 230
+ G+ A+D+ N P N+ Q R+L ++ ++ M +LGM++ LAV
Sbjct: 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAV 239
Query: 231 AQGSSRPPYLAVMKWE-GGDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAA 289
QGS ++V++++ + +P+ +GKG+ FD+GGISIKPS GM+EMK D+ GAAA
Sbjct: 240 GQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAA 299
Query: 290 VTGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLIL 349
V G++ ++AE + IN IGVLA ENMPG A RPGD++ +MSGQT+EV+NTDAEGRL+L
Sbjct: 300 VYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVL 359
Query: 350 ADALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLW 409
D L Y + P +ID+ATLTGA V++LG+ GL AN++ LA +L+++ +G+ W
Sbjct: 360 CDVLTYVER-FEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAW 418
Query: 410 RMPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPK 469
R+P+ +EY + +ES FADM NIGGR G+I A FL +F + +WAH+DIAG A +
Sbjct: 419 RLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAW----R 474
Query: 470 EINQSWASGFGVRLLDEFVRAFY 492
A+G V LL +F+
Sbjct: 475 SGKAKGATGRPVALLAQFLLNRA 497