RPSBLAST alignment of GI: 254780392 and protein with PDBid: 1gyt

>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Length = 503
 Score =  406 bits (1045), Expect = e-114
 Identities = 167/504 (33%), Positives = 266/504 (52%), Gaps = 19/504 (3%)

Query: 4   KFSFAKNPSIKQEGLAILL----KTSFSDVAGLSLIGSPSIVMRAVSVKNFIGESKSHLN 59
           +FS       KQ    I++        S +A      S   +   +      G+    L 
Sbjct: 2   EFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLL 61

Query: 60  ILAPVDCVWDRLVVAGIGDPRDAN-FSWLKAGGSIASYIEEDKNIEIFVDVPEYPITKAE 118
           +    + + +R+++ G G  R+ +   + +      + + +  ++E    + E  +    
Sbjct: 62  LHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRN 121

Query: 119 ----IRDLVLGFMLKTYTFDQYKTKKRESSSPRSKENISVTIVTEMIQQSSQVVADIQSV 174
               +R  V       Y+FDQ KT K        ++ +        +    + +    ++
Sbjct: 122 NYWKVRQAVETAKETLYSFDQLKTNK-SEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI 180

Query: 175 VKGVNLARDIINEPANVLGTDEFCKQVR---KLESLGVAVEILDKEAMHKLGMNALLAVA 231
             G+  A+D+ N P N+        Q R      S  V   ++ ++ M +LGM++ LAV 
Sbjct: 181 AAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVG 240

Query: 232 QGSSRPPYLAVMKWEG-GDSEEQPLAFIGKGVVFDTGGISIKPSHGMEEMKGDLGGAAAV 290
           QGS     ++V++++G    + +P+  +GKG+ FD+GGISIKPS GM+EMK D+ GAAAV
Sbjct: 241 QGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAV 300

Query: 291 TGLLHVLAERKAKINAIGVLALVENMPGSSAQRPGDIVRSMSGQTIEVINTDAEGRLILA 350
            G++ ++AE +  IN IGVLA  ENMPG  A RPGD++ +MSGQT+EV+NTDAEGRL+L 
Sbjct: 301 YGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLC 360

Query: 351 DALWYCRTHYNPHLMIDLATLTGAMVVSLGNIYAGLFANNDVLAEQLLSSGLSTGELLWR 410
           D L Y    + P  +ID+ATLTGA V++LG+   GL AN++ LA +L+++   +G+  WR
Sbjct: 361 DVLTYVE-RFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWR 419

Query: 411 MPMNEEYNKLIESKFADMKNIGGRGAGSIVAAQFLEKFVQDASWAHIDIAGVATGGYPKE 470
           +P+ +EY + +ES FADM NIGGR  G+I A  FL +F +  +WAH+DIAG A      +
Sbjct: 420 LPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAK 479

Query: 471 INQSWASGFGVRLLDEFVRAFYEK 494
                A+G  V LL +F+      
Sbjct: 480 ----GATGRPVALLAQFLLNRAGF 499