HHsearch alignment for GI: 254780395 and conserved domain: COG1452
>COG1452 Imp Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane].
Probab=99.30 E-value=1.2e-07 Score=68.01 Aligned_cols=179 Identities=17% Similarity=0.110 Sum_probs=111.3
Q ss_pred EEEEEEEEEEECCCCEEEEEEEEEEEE-CCEEEEEEEEEEECCCCEEEEE-CCEEEECCCCCEEEEEEEEEECCCCEEEE
Q ss_conf 799920799976689799998799998-9969995189998637879997-34899838987899706999430255999
Q gi|254780395|r 52 LDISSDEIVLNSEGSTTTAVGNVKIEY-KGYHLSARDITFNHKNHRIIAS-GNIKLIEPDKRQIHAEYLDITDDFTNGII 129 (762)
Q Consensus 52 ~~~~ad~~~~~~~~~~~~a~G~v~i~~-~~~~l~Ad~i~y~~~~~~~~a~-G~v~~~~~~g~~~~~~~~~~~~~~~~g~~ 129 (762)
T Consensus 82 ~~l~Ad~v~y~q~t~~~~A~GnV~~~~~~g~~i~gd~a~~~ld~~~g~~~n~~~~~~~~-~~~~~A~~a~~~d-~~~~~l 159 (784)
T COG1452 82 YRLLADKVDYDQKTDRVTATGNVEYIDGDGILIKGDKADVNLDTKKGFVSNFRYQTVGR-QGRFVAKSAERRD-NDVTIL 159 (784)
T ss_pred EEEEEEEEEEECCCCEEEEECCEEEECCCCCEEECCEEEEECCCCCCEEEEEEEEECCC-EEEEEEEEEEECC-CEEEEE
T ss_conf 89987589972347889997779998289809987568996145764586008985252-2579985522148-706999
Q ss_pred EEEEEEEEC---CC-EEEEEEEEEECC--CEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCEEEE
Q ss_conf 847999706---75-021024687239--759999879973137665778885089996699996777779994428998
Q gi|254780395|r 130 KNLTIKIPA---DE-TYLTASSAQIIG--QRTIFDKGTYTACSSCSKPNSRPPFWIVKSKRAILNRKTHTIRLEKPYLEI 203 (762)
Q Consensus 130 ~~~~~~~~~---~~-~~~~~~~~~~~~--~~~~~~~~~~T~C~~~~~~~~~~P~W~i~a~~i~~d~~~~~~~~~~a~l~i 203 (762)
T Consensus 160 ~~at~TtC~~~dnp~W~v~A~~i~~~~~~~~~~~~na~f~v~--------gvPVfYlPyf~~P~~~~RkSGFL-~P~~~~ 230 (784)
T COG1452 160 KNATYTTCEPCDNPIWSVKASKIIQNREKQFAVFWNARFEVG--------GVPVFYLPYFFFPDDDRRKSGFL-IPSFGY 230 (784)
T ss_pred EEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEC--------CCCEEEEEEEECCCCCCCCCCCC-CCCCCC
T ss_conf 510882368889972599964899817785899995699988--------80259500361407984422211-354244
Q ss_pred CC-EE-EEECCCEECCCCCCCCCCCCCCEEEECCCCCCCCEECEE
Q ss_conf 27-06-863254001245554545410005641333343000103
Q gi|254780395|r 204 FG-NS-IFYFPLIEIPDETVVRKTGFLTPLFSSGEKQRFGVGIPY 246 (762)
Q Consensus 204 ~~-vP-v~y~Py~~~P~~~~~R~sGfL~P~~~~s~~~G~~~~~Py 246 (762)
T Consensus 231 ss~~Gf~~~~PyY~~laPn~D---lTltp--~y~skrG~~l~~e~ 270 (784)
T COG1452 231 SSRNGFSYGQPYYWNLAPNYD---LTLTP--QYMSKRGFGLEGEF 270 (784)
T ss_pred CCCCCCEEECCEEEECCCCCC---CEECH--HHHHHHCCCCCEEE
T ss_conf 588880783614784268988---49866--78866085422369