HHsearch alignment for GI: 254780395 and conserved domain: PRK09980
>PRK09980 ompL outer membrane porin L; Provisional.
Probab=90.92 E-value=0.89 Score=22.18 Aligned_cols=99 Identities=11% Similarity=0.215 Sum_probs=56.4
Q ss_pred EEEEEECCCCEEEEEEEEECCCC------------CEEEEEEEEEEEEC-CCCEEEEEEEEECCCCCC--C--CCCEEEE
Q ss_conf 99988436777999999861676------------60668899999964-740899999872267544--6--6632589
Q gi|254780395|r 623 AAVRLSLSPKITFSTQTLINPKD------------WSTRRTDTTIDYTM-GSYEANISYTHIPAYPLY--A--YDARKTI 685 (762)
Q Consensus 623 ~~~~~~~~~~~~l~~~~~~d~~~------------~~~~r~~~~~~~~~-~~~~~~~~y~~~~~~~~~--~--~~~~~~~ 685 (762)
T Consensus 108 Lkl~Y~fd~~~~~~~RYRYd~~~yds~dlnG~~d~~d~hr~d~Y~~y~~~~~~~~~~~~tY~~~vnd~~~~NgKk~~~E~ 187 (230)
T PRK09980 108 LDVNYKFTPWFNLTVRNRYNHNNYSSTDLNGELDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNVNDFNSSNGTKHHWEI 187 (230)
T ss_pred EEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCCEECCCCCHHHHE
T ss_conf 77777665871588998852455674345776677750773005778975743799730999850770732786404431
Q ss_pred EEEEEEECCCCEEEEEEEEE-CCC-C--CCC--EEEEEEEEE
Q ss_conf 98999972565699999995-165-4--541--225656996
Q gi|254780395|r 686 QSRIKFKINDVLSADASLKW-NMR-A--ELP--SHSIGLAYQ 721 (762)
Q Consensus 686 ~~~~~~~l~~~w~~~~~~~y-dl~-~--~~~--~~~~Gl~Y~ 721 (762)
T Consensus 188 n~~~~Yk~~~~w~PY~E~~~ld~~~~~~~r~q~r~RVGv~y~ 229 (230)
T PRK09980 188 TNTFRYRINEHWLPYFELRWLDRNVGPYHREQNQIRIGAKYF 229 (230)
T ss_pred EEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEE
T ss_conf 026888428962431898742235676777135799988862