HHsearch alignment for GI: 254780395 and conserved domain: TIGR03002
>TIGR03002 outer_YhbN cell envelope biogenesis protein YhbN; InterPro: IPR014340 Members of this entry include YhbN, which is an essential protein in Escherichia coli. It is implicated in cell envelope integrity, and has numerous homologues in other Proteobacteria in a conserved location near lipopolysaccharide inner core biosynthesis genes. This entry is distantly related to the organic solvent tolerance protein (OstA)..
Probab=98.96 E-value=1.2e-07 Score=68.03 Aligned_cols=102 Identities=17% Similarity=0.293 Sum_probs=71.8
Q ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCEEEEEEEEEEEC--CCC---EEEEECC--EEEEC--CCCCE-EE-
Q ss_conf 76666079992079997668979999879999899699951899986--378---7999734--89983--89878-99-
Q gi|254780395|r 46 TNRHSELDISSDEIVLNSEGSTTTAVGNVKIEYKGYHLSARDITFNH--KNH---RIIASGN--IKLIE--PDKRQ-IH- 114 (762)
Q Consensus 46 ~~~~~~~~~~ad~~~~~~~~~~~~a~G~v~i~~~~~~l~Ad~i~y~~--~~~---~~~a~G~--v~~~~--~~g~~-~~- 114 (762)
T Consensus 4 ~D~~qPi~I~Ad~~~~D~~~~~~~f~GnV~itQG~~~I~ADkv~v~~~~~~~~~~~~~A~G~~PA~F~q~~d~g~~~~~g 83 (150)
T TIGR03002 4 SDREQPIEIEADSQTLDDKKNVVTFTGNVVITQGTLKIRADKVVVTRPNDGGGIEKATATGNKPATFRQKLDDGKEYIEG 83 (150)
T ss_pred CCCCCCEEEEEEEEEEECCCCEEEEECCEEEEECCEEEECCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCEEEEE
T ss_conf 87568689994006654028838886565878297598522889882688786089999807818988995599827999
Q ss_pred -EEEEEEECCCCEEEEE-EEEEEEECCC-EEEEEEEEE
Q ss_conf -7069994302559998-4799970675-021024687
Q gi|254780395|r 115 -AEYLDITDDFTNGIIK-NLTIKIPADE-TYLTASSAQ 149 (762)
Q Consensus 115 -~~~~~~~~~~~~g~~~-~~~~~~~~~~-~~~~~~~~~ 149 (762)
T Consensus 84 ~A~~i~Y~~~~~~~~Ltg~A~v--~Q~~k~~~~G~~I~ 119 (150)
T TIGR03002 84 QANRIEYDPAKDTVVLTGNARV--KQGGKNEVSGDVIT 119 (150)
T ss_pred ECCEEEEECCCCEEEEECCEEE--EECCCCEEECCEEE
T ss_conf 7118999325779999123499--78897778766889