HHsearch alignment for GI: 254780395 and conserved domain: TIGR03002
>TIGR03002 outer_YhbN cell envelope biogenesis protein YhbN; InterPro: IPR014340 Members of this entry include YhbN, which is an essential protein in Escherichia coli. It is implicated in cell envelope integrity, and has numerous homologues in other Proteobacteria in a conserved location near lipopolysaccharide inner core biosynthesis genes. This entry is distantly related to the organic solvent tolerance protein (OstA)..
Probab=98.00 E-value=3e-05 Score=52.06 Aligned_cols=109 Identities=12% Similarity=0.148 Sum_probs=55.3
Q ss_pred CCEEEEEEEEEEECCCCEEEEECCEEEECCCCCEEEEEEEEEEC--CCCE---EEE--E-EEEEE--EECCC--EEEEEE
Q ss_conf 99699951899986378799973489983898789970699943--0255---999--8-47999--70675--021024
Q gi|254780395|r 79 KGYHLSARDITFNHKNHRIIASGNIKLIEPDKRQIHAEYLDITD--DFTN---GII--K-NLTIK--IPADE--TYLTAS 146 (762)
Q Consensus 79 ~~~~l~Ad~i~y~~~~~~~~a~G~v~~~~~~g~~~~~~~~~~~~--~~~~---g~~--~-~~~~~--~~~~~--~~~~~~ 146 (762)
T Consensus 8 qPi~I~Ad~~~~D~~~~~~~f~GnV~itQG~-~~I~ADkv~v~~~~~~~~~~~~~A~G~~PA~F~q~~d~g~~~~~g~A~ 86 (150)
T TIGR03002 8 QPIEIEADSQTLDDKKNVVTFTGNVVITQGT-LKIRADKVVVTRPNDGGGIEKATATGNKPATFRQKLDDGKEYIEGQAN 86 (150)
T ss_pred CCEEEEEEEEEEECCCCEEEEECCEEEEECC-EEEECCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECC
T ss_conf 8689994006654028838886565878297-598522889882688786089999807818988995599827999711
Q ss_pred EEEE--CCCEEEE-EEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEC
Q ss_conf 6872--3975999-98799731376657788850899966999967777799944
Q gi|254780395|r 147 SAQI--IGQRTIF-DKGTYTACSSCSKPNSRPPFWIVKSKRAILNRKTHTIRLEK 198 (762)
Q Consensus 147 ~~~~--~~~~~~~-~~~~~T~C~~~~~~~~~~P~W~i~a~~i~~d~~~~~~~~~~ 198 (762)
T Consensus 87 ~i~Y~~~~~~~~Ltg~A~v~Q~--~-----k---~~~~G~~I~Y~~~~q~~~a~~ 131 (150)
T TIGR03002 87 RIEYDPAKDTVVLTGNARVKQG--G-----K---NEVSGDVITYDTKKQKVTAKG 131 (150)
T ss_pred EEEEECCCCEEEEECCEEEEEC--C-----C---CEEECCEEEEECEEEEEEEEE
T ss_conf 8999325779999123499788--9-----7---778766889844012998980