HHsearch alignment for GI: 254780395 and conserved domain: pfam06835

>pfam06835 DUF1239 Protein of unknown function (DUF1239). This family consists of several hypothetical bacterial proteins of around 190 residues in length. The function of this family is unknown.

Probab=98.33  E-value=3e-05  Score=52.10  Aligned_cols=108  Identities=16%  Similarity=0.214  Sum_probs=70.6

Q ss_pred             CEEEEEEEEEEEECCCCEEEEEEEEEEEE-CC---EEEEEEEEEEECCCCEEEEECCEEEECCCC----CEEEEEEEEEE
Q ss_conf             60799920799976689799998799998-99---699951899986378799973489983898----78997069994
Q gi|254780395|r   50 SELDISSDEIVLNSEGSTTTAVGNVKIEY-KG---YHLSARDITFNHKNHRIIASGNIKLIEPDK----RQIHAEYLDIT  121 (762)
Q Consensus        50 ~~~~~~ad~~~~~~~~~~~~a~G~v~i~~-~~---~~l~Ad~i~y~~~~~~~~a~G~v~~~~~~g----~~~~~~~~~~~  121 (762)
T Consensus        51 l~~~l~a~~~~~~~~~~~~~l~~P~~~~~~~~~~~w~i~A~~g~~~~~~~~i~L~g~V~i~~~~~~~~~~~l~T~~l~~~  130 (176)
T pfam06835        51 LQYRLTADKLEHYPDDDTTEFTNPVLIIYQDGKPPWTITADRAKLNKDGQTLYLYGNVVIQSLEDKSRLTTITTENLTVN  130 (176)
T ss_pred             EEEEEEECEEEEECCCCCEEEEEEEEEEECCCCCEEEEEECEEEEECCCCEEEEECCEEEEECCCCCCCEEEEEHEEEEE
T ss_conf             99999904579965899689996399997799836999979499937996999989999997689987569992209999


Q ss_pred             CCCCEEEEEEEEEEEECCCEEEEEEEEEE--CCCEEEEE
Q ss_conf             30255999847999706750210246872--39759999
Q gi|254780395|r  122 DDFTNGIIKNLTIKIPADETYLTASSAQI--IGQRTIFD  158 (762)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  158 (762)
T Consensus       131 ~~~~~~~td~~V~-i~~~~~~~~g~gm~~~l~~~~~~l~  168 (176)
T pfam06835       131 LDTQDASTDQPVT-ITGPNFVSTGTGMKANLKTGTAELL  168 (176)
T ss_pred             CCCCEEEECCCEE-EEECCCEEEEEEEEEECCCCEEEEE
T ss_conf             4777999487499-9909979998889999758999994