HHsearch results for GI: 254780395 and protein with PDBid: 3emn_X
>3emn_X Voltage-dependent anion-selective channel protein 1; VDAC1, eukaryotic membrane protein, beta barrel, acetylation, alternative splicing, apoptosis; HET: MC3; 2.30A {Mus musculus} PDB: 2k4t_A 2jk4_A
Probab=94.41 E-value=0.18 Score=25.37 Aligned_cols=82 Identities=13% Similarity=0.180 Sum_probs=52.0
Q ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEECCC
Q ss_conf 36777999999861676606688999999647408999998722675446663258998999972565699999995165
Q gi|254780395|r 629 LSPKITFSTQTLINPKDWSTRRTDTTIDYTMGSYEANISYTHIPAYPLYAYDARKTIQSRIKFKINDVLSADASLKWNMR 708 (762)
Q Consensus 629 ~~~~~~l~~~~~~d~~~~~~~r~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~~~~~ydl~ 708 (762)
..++|.+.....||....++....+.+.|+.+.+.+++... . ...+.++.-.+++++|.+.....++..
T Consensus 157 ~~~~~~lG~e~~y~~~~~~~~~~~~~~~y~~~~~~~s~~~~---~--------~~~~~~S~~~kv~~~l~vg~e~~~~~~ 225 (295)
T 3emn_X 157 GYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVN---D--------GTEFGGSIYQKVNKKLETAVNLAWTAG 225 (295)
T ss_dssp EETTEEEEEEEEEETTTTEEEEEEEEEEEECSSEEEEEEEE---T--------TTEEEEEEEEECSSSEEEEEEEEEETT
T ss_pred CCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEC---C--------CCEEEEEEEEECCCCEEEEEEEEEECC
T ss_conf 22878999998852688873038999898379879999988---9--------882899999993860578889997026
Q ss_pred CCCCEEEEEEEEE
Q ss_conf 4541225656996
Q gi|254780395|r 709 AELPSHSIGLAYQ 721 (762)
Q Consensus 709 ~~~~~~~~Gl~Y~ 721 (762)
.....-.+|.+|.
T Consensus 226 ~~~~~~~iG~qy~ 238 (295)
T 3emn_X 226 NSNTRFGIAAKYQ 238 (295)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEE
T ss_conf 8973899999999