HHsearch results for GI: 254780395 and protein with PDBid: 3my2_A
>3my2_A Lipopolysaccharide export system protein LPTC; lipopolysaccharide export pathway, structural genomics scottish structural proteomics facility; 2.20A {Escherichia coli}
Probab=98.29 E-value=5.1e-05 Score=49.09 Aligned_cols=113 Identities=8% Similarity=0.023 Sum_probs=51.1
Q ss_pred EEEEEEEEEEEECCCCEEEEEE-EEEEEECC----EEEEEEEEEEECCCCEEEEECCEEEECCCC----CEEEEEEEEEE
Q ss_conf 0799920799976689799998-79999899----699951899986378799973489983898----78997069994
Q gi|254780395|r 51 ELDISSDEIVLNSEGSTTTAVG-NVKIEYKG----YHLSARDITFNHKNHRIIASGNIKLIEPDK----RQIHAEYLDIT 121 (762)
Q Consensus 51 ~~~~~ad~~~~~~~~~~~~a~G-~v~i~~~~----~~l~Ad~i~y~~~~~~~~a~G~v~~~~~~g----~~~~~~~~~~~ 121 (762)
...|.|+++.+....+.+.+.. .+.++.++ ..|+||+.+++.. +.+.+.|||++....+ ..+.++.+.++
T Consensus 43 ~~~l~A~~~~~~~~~~~~~l~~P~~~~~~~~~~~~w~itA~~g~~~~~-~~l~L~gnV~i~~~~~~~~~~~l~T~~L~~~ 121 (175)
T 3my2_A 43 SYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTND-RMLYLYGHVEVNALVPDSQLRRITTDNAQIN 121 (175)
T ss_dssp CEEEECSSEEEETTTTEEEEESCEEEEECTTCCEEEEEECSEEEECTT-SEEEEEEEEEEEECSSSCSEEEEEEEEEEEE
T ss_pred EEEEECCHHEECCCCCCEEEECCEEEEECCCCCCEEEEEECEEEECCC-CEEEEECEEEEEECCCCCCCEEEEEEEEEEE
T ss_conf 999991631421488964882559999748998229999385898799-6899964099996378887469998159999
Q ss_pred CCCCEEEEEEEEEEEECCCEEEEEEEEEE--CCCEEEEEEEEEEEC
Q ss_conf 30255999847999706750210246872--397599998799731
Q gi|254780395|r 122 DDFTNGIIKNLTIKIPADETYLTASSAQI--IGQRTIFDKGTYTAC 165 (762)
Q Consensus 122 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~T~C 165 (762)
.+.+...-...... ......+.|...+. ..+.+.|...+=+.-
T Consensus 122 ~~~~~~~td~~V~i-~~~~~~~~g~gm~~~l~~~~~~l~~~Vk~~y 166 (175)
T 3my2_A 122 LVTQDVTSEDLVTL-YGTTFNSSGLKMRGNLRSKNAELIEKVRTSY 166 (175)
T ss_dssp TTTCEEEEEEEEEE-EESSCEEEEEEEEEETTTTEEEEEEEEEETT
T ss_pred ECCCEEEECCCEEE-ECCCCEEEEEEEEEECCCCEEEEECCEEEEE
T ss_conf 15679994884999-9299699977899996389999940628999