HHsearch alignment for GI: 254780396 and conserved domain: PRK00059

>PRK00059 prsA peptidylprolyl isomerase; Provisional.
Probab=100.00  E-value=0  Score=313.78  Aligned_cols=292  Identities=15%  Similarity=0.161  Sum_probs=230.4

Q ss_pred             HHHHHHHHHHHHHHHHHHCC----CCCCCCCCEEEEECCEECCHHHHHHHHHHHH------HHC------------CHHH
Q ss_conf             99999999999999998402----3211348269998867868899999999987------303------------5035
Q gi|254780396|r   14 KLLTTYFVLIIFCIVPIVSY----KSWAMSSRIRTTINGEVITDGDISKRIALLK------LQK------------INGE   71 (317)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~vvA~Vng~~It~~e~~~~~~~~~------~~~------------~~~~   71 (317)
T Consensus         5 ~ki~~~~ii~~~~~~~vg~~~~~~~~~~~~~~~VA~Vng~~It~~e~~~~~~~~~~~~~l~~q~g~~~~~~~~~~~~~~~   84 (336)
T PRK00059          5 KKIVASLLVGVFIFSAVGCNMVEKTPEAIAKTTVATVGGEKITRGDLDSDPSMKQVLEQLKSQYGDKYEKNEQVKEQLKQ   84 (336)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf             99999999999999983025334676677896489899998489999999999999999998743013557001899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH----HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999864200122344456689999----9997313430356777765311245546999999899999
Q gi|254780396|r   72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV  147 (317)
Q Consensus        72 ~~~~~l~~LI~~~l~~~~a~~~~i~v~~~~i~~~i~----~~~~~~~~~~~~~~~~l~~~g~t~~~~~~~i~~~l~~~~~  147 (317)
T Consensus        85 ~r~qvL~~LI~~~Ll~q~A~~~gl~vsd~ev~~~I~~~~~~~~~~g~f~~~~y~~~L~~~g~t~~~~~~~~r~~l~~~~l  164 (336)
T PRK00059         85 QKKQILESLITEKVLLQKAKELKLIPSDEELNKEVDKQVNEIKKQYNNDEEKFEEALKQTGFTEETFKEYLKNQIIIEKV  164 (336)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999869984999999999999999988379999999999998699999999999999999999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHCC---CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9998432035558999864432111001---1002333221024675444799998643578865223324899998520
Q gi|254780396|r  148 VKNDFMLKYGNLEMEIPANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS  224 (317)
Q Consensus       148 ~~~~~~~~i~~~~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (317)
T Consensus       165 ~~-~v~~~v~Vsd~Ei~~yY~~nk~~f~~~p~~~~~~~Il~~~~-------~~A----~~i~~~l~~G~dF~~lAk~~S~  232 (336)
T PRK00059        165 IN-EVVKDVKVTDKDAQKYYDENKSTFTEKPNTVHLSHILVKTE-------EEA----KKVKKRLDKGEDFAKVAKEVSQ  232 (336)
T ss_pred             HH-HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCH-------HHH----HHHHHHHHCCCCHHHHHHHHCC
T ss_conf             99-97456865889999999997887337866588998887899-------999----9999998779988999998489


Q ss_pred             CC-CCCCCCCCCCC--CHHHCCHHHHH-HCCCCCCCCCCCEEECCEEEEEEEECCCCCC--CCHHHHHHHHHHHHHHHHH
Q ss_conf             13-22568746752--75561367665-1124578801237638948999982235788--4457899999999999999
Q gi|254780396|r  225 KI-HDVSIGKAQYL--LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIE  298 (317)
Q Consensus       225 ~~-~~~~~g~lg~~--~~~~l~~~~~~-~~~~~~G~is~pv~t~~G~hiikv~~~r~~~--~~~~~~~~i~~~l~~~~~~  298 (317)
T Consensus       233 D~~s~~~gGdLG~~~~~~~~~~~~f~~a~f~Lk~GeiS~pV~t~~GyhIIkl~~~~~~~~~~feevk~~I~~~L~~qK~~  312 (336)
T PRK00059        233 DPGSKDKGGDLGDVPYSDSNYDKEFMDAAKALKEGEISAPVKTQFGYHIIKAIKKKEYPVKPFDSVKEQIKKQLLQEKQS  312 (336)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             95310148866640267665566899999745688868860668867999997215788999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCC
Q ss_conf             9999999999975477509
Q gi|254780396|r  299 KHEAEYVKKLRSNAIIHYY  317 (317)
Q Consensus       299 ~~~~~~l~~Lr~~A~I~~f  317 (317)
T Consensus       313 ~~~~e~~~~l~~~a~I~i~  331 (336)
T PRK00059        313 EVFKKKIEEWKKDLKVKVY  331 (336)
T ss_pred             HHHHHHHHHHHHHCCEEEC
T ss_conf             9999999999973780754