HHsearch alignment for GI: 254780396 and conserved domain: PRK02998
>PRK02998 prsA peptidylprolyl isomerase; Reviewed.
Probab=100.00 E-value=8.9e-33 Score=226.29 Aligned_cols=237 Identities=14% Similarity=0.192 Sum_probs=192.0
Q ss_pred CCEEEEECCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 82699988678688999999999873035035999999999999999864200122344456689999999731343035
Q gi|254780396|r 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119 (317)
Q Consensus 40 ~~vvA~Vng~~It~~e~~~~~~~~~~~~~~~~~~~~~l~~LI~~~l~~~~a~~~~i~v~~~~i~~~i~~~~~~~~~~~~~ 119 (317)
T Consensus 25 ~~~vat~kgg~IT~~e~y~~lk~--------~~g~~~l~~li~~kvl~~~y-----kVsdkev~~~~~~~k~qyG---~~ 88 (283)
T PRK02998 25 SDNVVTSKVGNITEKELSKELRQ--------KYGESTLYQMVLSKALLDKY-----KVSDEEAKKQVEEAKDKMG---DN 88 (283)
T ss_pred CCCEEEECCCCCCHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHHH---HH
T ss_conf 98179843992839999999999--------99999999999999999983-----6889999999999999997---89
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 6777765311-245546999999899999999843203555899986443211100110023332210246754447999
Q gi|254780396|r 120 FSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198 (317)
Q Consensus 120 ~~~~l~~~g~-t~~~~~~~i~~~l~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (317)
T Consensus 89 F~~~L~q~g~t~e~~~k~~i~~~l~~~~a~k------~~vtd~~~k~~y~-------p~~~~~hIlv~~-------e~~- 147 (283)
T PRK02998 89 FKSTLEQVGLKNEDELKEKMKPEIAFEKAIK------ATVTEKDVKDNYK-------PEMKVSHILVKD-------EKT- 147 (283)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH------CCCCHHHHHHHCC-------CCEEEEEEEECC-------HHH-
T ss_conf 9999998699828999999999999999875------5188899998649-------864889989898-------999-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHCCHHHHH-HCCCCCCCCCCCEEECCEEEEEEEECCC
Q ss_conf 9864357886522332489999852013-2256874675275561367665-1124578801237638948999982235
Q gi|254780396|r 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276 (317)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~lg~~~~~~l~~~~~~-~~~~~~G~is~pv~t~~G~hiikv~~~r 276 (317)
T Consensus 148 ---A~~v~~~L~~G~dF~~lAk~yS~D~~s~~~GG~Lg~~~~g~~~~~f~~Aaf~L~~G~vS~PVkt~~GyHIIkv~dk~ 224 (283)
T PRK02998 148 ---AKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIKVTDKK 224 (283)
T ss_pred ---HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEEEECCC
T ss_conf ---99999998779989999999589966443588667679998078999999759999948877878867999980168
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHCCCCC
Q ss_conf 7884457899999999999999999----999999997547750
Q gi|254780396|r 277 DLGGEIALKAYLSAQNTPTKIEKHE----AEYVKKLRSNAIIHY 316 (317)
Q Consensus 277 ~~~~~~~~~~~i~~~l~~~~~~~~~----~~~l~~Lr~~A~I~~ 316 (317)
T Consensus 225 ~~~~~~~~K~~l~~~i~~~k~~d~~~~~~~~vi~~~lkkanV~i 268 (283)
T PRK02998 225 ELKPFDEVKDSIRKDLEQQRLQDTTGKWKQQVVNDLLKDADIKV 268 (283)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 89999999999999999999755478999999999998779876