HHsearch alignment for GI: 254780396 and conserved domain: PRK10770
>PRK10770 peptidyl-prolyl cis-trans isomerase SurA; Provisional.
Probab=100.00 E-value=0 Score=314.21 Aligned_cols=299 Identities=14% Similarity=0.213 Sum_probs=240.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEECCHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999984023211348269998867868899999999987303--------5035999999999999999
Q gi|254780396|r 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLK 86 (317)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvA~Vng~~It~~e~~~~~~~~~~~~--------~~~~~~~~~l~~LI~~~l~ 86 (317)
T Consensus 3 ~~~~~~~~~~~~~~~~--~a~~~~iD~IvAvVn~~iIl~sdl~~~~~~~~~~~~~~~~~~p~~~~Lr~qvLd~LI~e~Ll 80 (428)
T PRK10770 3 NWKTLLLGIAMIANTS--FAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAQQAGQQLPDDATLRHQILERLIMDQII 80 (428)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 3999999999998475--54055338279999990544999999999999999855899996689999999999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 86420012234445668999999973134303567777653112455469999998999999998432035558999864
Q gi|254780396|r 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166 (317)
Q Consensus 87 ~~~a~~~~i~v~~~~i~~~i~~~~~~~~~~~~~~~~~l~~~g~t~~~~~~~i~~~l~~~~~~~~~~~~~i~~~~~e~~~~ 166 (317)
T Consensus 81 ~Q~A~~~gi~Vsd~evd~~i~~ia~~~~~s~~q~~~~L~~~G~s~~~~r~~ir~ell~~~l~~~~v~~~i~Vs~~Ev~~~ 160 (428)
T PRK10770 81 LQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL 160 (428)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99999839986999999999999987488799999999976997899999999999999999998650102478999999
Q ss_pred HHHHHHHC--CC--------------------------------------------------------------------
Q ss_conf 43211100--11--------------------------------------------------------------------
Q gi|254780396|r 167 KQKMKNIT--VR-------------------------------------------------------------------- 176 (317)
Q Consensus 167 ~~~~~~~~--~~-------------------------------------------------------------------- 176 (317)
T Consensus 161 ~~~~~~~~~~~~e~~l~~Ili~~~~~~~~~~~~~~~~~a~~i~~~i~~G~dF~~lA~~~S~~~~a~~GGdlGw~~~~~lp 240 (428)
T PRK10770 161 AKQIGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARSIVDQARNGADFGKLAIAYSADQQALKGGQMGWGRIQELP 240 (428)
T ss_pred HHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCH
T ss_conf 99866422688617899999737888899999999999999999987589989999982657101116864421122130
Q ss_pred -------------------------------------------CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH-
Q ss_conf -------------------------------------------002333221024675444799998643578865223-
Q gi|254780396|r 177 -------------------------------------------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL- 212 (317)
Q Consensus 177 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (317)
T Consensus 241 ~~f~~a~~~l~~Geis~pi~s~~G~HIikl~d~r~~~~~~~~~e~~~rHILi~~~--~~~~~~~a~~~l~~i~~~i~~g~ 318 (428)
T PRK10770 241 GIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGASQNISVTEVHARHILLKPS--PIMTDEQARAKLEQIAADIKSGK 318 (428)
T ss_pred HHHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 7899999716898723536417835999724432566541055576667633788--66575999999999999987675
Q ss_pred HHHHHHHHHHHCCC-CCCCCCCCCCCCHHHCCHHHHHH-CCCCCCCCCCCEEECCEEEEEEEECCCCC-CCCHHHHHHHH
Q ss_conf 32489999852013-22568746752755613676651-12457880123763894899998223578-84457899999
Q gi|254780396|r 213 PKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLS 289 (317)
Q Consensus 213 ~~~~~~~~~~~~~~-~~~~~g~lg~~~~~~l~~~~~~~-~~~~~G~is~pv~t~~G~hiikv~~~r~~-~~~~~~~~~i~ 289 (317)
T Consensus 319 ~~F~~~A~~~S~D~~Sa~~GGdLgw~~~~~~~p~f~~~~~~l~~GeiS~Pv~t~~G~hii~l~~~R~~d~~~~~~r~~~~ 398 (428)
T PRK10770 319 TTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQISAPVHSSFGWHLIELLDTRQVDKTDAAQKDRAY 398 (428)
T ss_pred CCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCEEEEEEEEEECCCCCCCHHHHHHHH
T ss_conf 57999999862795245428836777845479789999970899991656665870699999840367864255899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999999999999999975477509
Q gi|254780396|r 290 AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317 (317)
Q Consensus 290 ~~l~~~~~~~~~~~~l~~Lr~~A~I~~f 317 (317)
T Consensus 399 ~~l~~~k~~~~~~~wl~~lR~~ayI~I~ 426 (428)
T PRK10770 399 RMLFNRKFSEEAATWMQEQRASAYVKIL 426 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEEEEC
T ss_conf 9999999999999999999851179740