HHsearch alignment for GI: 254780396 and conserved domain: PRK10770
>PRK10770 peptidyl-prolyl cis-trans isomerase SurA; Provisional.
Probab=99.73 E-value=3.9e-17 Score=127.28 Aligned_cols=172 Identities=10% Similarity=0.131 Sum_probs=101.3
Q ss_pred HHHHHCCC--CCHHHHH----HHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 99973134--3035677----7765311245546999999----------899999999843203555899986443211
Q gi|254780396|r 108 QHARNTGL--SAEDFSS----FLDKQGIGDNHFKQYLAIQ----------SIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171 (317)
Q Consensus 108 ~~~~~~~~--~~~~~~~----~l~~~g~t~~~~~~~i~~~----------l~~~~~~~~~~~~~i~~~~~e~~~~~~~~~ 171 (317)
T Consensus 82 Q~A~~~gi~Vsd~evd~~i~~ia~~~~~s~~q~~~~L~~~G~s~~~~r~~ir~ell~~~l~~~~v~~~i~Vs~~Ev~~~~ 161 (428)
T PRK10770 82 QMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLA 161 (428)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 99998399869999999999999874887999999999769978999999999999999999986501024789999999
Q ss_pred HHCCCCHH------HHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCH
Q ss_conf 10011002------3332210246754447-9999864357886522332489999852013225687467527556136
Q gi|254780396|r 172 NITVREYL------IRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244 (317)
Q Consensus 172 ~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lg~~~~~~l~~ 244 (317)
T Consensus 162 ~~~~~~~~~~~e~~l~~Ili~~~~~~~~~~~~~~~~~a~~i~~~i~~G~dF~~lA~~~S~~~~a~~GGdlGw~~~~~lp~ 241 (428)
T PRK10770 162 KQIGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARSIVDQARNGADFGKLAIAYSADQQALKGGQMGWGRIQELPG 241 (428)
T ss_pred HHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCHH
T ss_conf 98664226886178999997378888999999999999999999875899899999826571011168644211221307
Q ss_pred HHHHH-CCCCCCCCCCCEEECCEEEEEEEECCCCCC
Q ss_conf 76651-124578801237638948999982235788
Q gi|254780396|r 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279 (317)
Q Consensus 245 ~~~~~-~~~~~G~is~pv~t~~G~hiikv~~~r~~~ 279 (317)
T Consensus 242 ~f~~a~~~l~~Geis~pi~s~~G~HIikl~d~r~~~ 277 (428)
T PRK10770 242 IFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGAS 277 (428)
T ss_pred HHHHHHHHCCCCCCCCCEECCCCEEEEEEHHHHCCC
T ss_conf 899999716898723536417835999724432566