HHsearch alignment for GI: 254780396 and conserved domain: PRK10788

>PRK10788 peptidyl-prolyl cis-trans isomerase (rotamase D); Provisional.
Probab=100.00  E-value=2.2e-40  Score=274.45  Aligned_cols=310  Identities=13%  Similarity=0.131  Sum_probs=235.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEECCHHHHHHHHHHH----HHHCC--------
Q ss_conf             957999999999999999999999999998402321134826999886786889999999998----73035--------
Q gi|254780396|r    1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----KLQKI--------   68 (317)
Q Consensus         1 ~~~~~~~~~~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvA~Vng~~It~~e~~~~~~~~----~~~~~--------   68 (317)
T Consensus         1 ML~~iR~~~~~~~~killgliil~Fv~~Gv~~~~~~-~~~~~va~Vng~~Is~~e~~~~~~~~~~~~~~~~G~~~~~~~~   79 (622)
T PRK10788          1 MMDNLRTAANSVVLKIILGLIILSFILTGVGGYLIG-GSNNYAAKVNGQEISRAQLEQAFQSERNRMQQQLGDQFSELAA   79 (622)
T ss_pred             CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             928886166098999999999999998224523658-9997489999998489999999999999999872755661121


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH---HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ----03599999999999999986420012234445668999999---97313430356777765311245546999999
Q gi|254780396|r   69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ  141 (317)
Q Consensus        69 ----~~~~~~~~l~~LI~~~l~~~~a~~~~i~v~~~~i~~~i~~~---~~~~~~~~~~~~~~l~~~g~t~~~~~~~i~~~  141 (317)
T Consensus        80 ~e~~~~~l~~qvl~~LI~~~lL~q~A~~lGl~vsd~~v~~~I~~~p~Fq~~G~Fd~~~y~~~L~~~g~t~~~f~~~~r~~  159 (622)
T PRK10788         80 NEGYMKQLRQQVLNRLIDEALLDQYARELGLGISDEQVKQAIFATPAFQTDGKFDNNRYNAILNQMGMTADQYAQALRNQ  159 (622)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             35689999999999999999999999986998799999999984856432699599999999997599999999999999


Q ss_pred             HHHHHHHHHH---------------------------------HHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf             8999999998---------------------------------4320355589998644321110011002333221024
Q gi|254780396|r  142 SIWPDVVKND---------------------------------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP  188 (317)
Q Consensus       142 l~~~~~~~~~---------------------------------~~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (317)
T Consensus       160 l~~~ql~~~i~~~~~~~~~e~~~~~~~~~q~R~v~~~~i~~~~~~~~~~vtd~el~~yY~~nk~~f~~pe~~~i~yv~l~  239 (622)
T PRK10788        160 LTTQQLINGVAGTDFMLPGETDELAALVLQQRVVREATIDVNALAAKQTVTDQEIQSYYDQNKNNFMAPEQFRVSYIKLD  239 (622)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCHHHHHHHHHHCHHHHCCCCEEEEEEEEEC
T ss_conf             99999999976426679999999999974211468899746770566899999999999956554068634888999835


Q ss_pred             CCC---CCCHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCC
Q ss_conf             675---44479999--------------------------864357886522332489999852013-225687467527
Q gi|254780396|r  189 DNK---LQNQGFVQ--------------------------KRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL  238 (317)
Q Consensus       189 ~~~---~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~lg~~~  238 (317)
T Consensus       240 ~~~~~~~vs~~ei~~~Y~~~~~~~~~pe~r~~~~I~~~~~~~A~~~~~~l~~G~dFa~lA~~~S~D~~Sa~~gGdLG~~~  319 (622)
T PRK10788        240 AATMQQTVSDADIQAYYDQHQDQFTQPERKRYSIIQTKTEDEAKAVLDELKKGADFATLAKEKSTDIISARNGGDMGWLE  319 (622)
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHCCCCHHEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             66702458999999999987775177411664301058999999999998769986999998378953212477313426


Q ss_pred             HHHCCHHHHHHCCCCCCCCCCCEEECCEEEEEEEECCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5561367665112457880123763894899998223578--844578999999999999999999999999975
Q gi|254780396|r  239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN  311 (317)
Q Consensus       239 ~~~l~~~~~~~~~~~~G~is~pv~t~~G~hiikv~~~r~~--~~~~~~~~~i~~~l~~~~~~~~~~~~l~~Lr~~  311 (317)
T Consensus       320 ~g~~~~~f~~a~~~~~GevS~pV~t~fG~hiikv~~i~~~~~~~~eevk~eI~~~l~~~~a~~~~~~~~~~~~d~  394 (622)
T PRK10788        320 DATTPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDA  394 (622)
T ss_pred             CCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             664428999988746798678476078238999832466778998999999999999999999999999999887