HHsearch alignment of GI: 254780396 and MMDB domain: 2itk_A_
>2itk_A (A:) Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; PIN1, isomerase, WW domain; HET: D11 NAL PE4; 1.45A {Homo sapiens}
Probab=99.53 E-value=7.1e-17 Score=125.20 Aligned_cols=162 Identities=9% Similarity=-0.006 Sum_probs=112.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
Q ss_conf 13430356777765311245546999999899999999843203555899986443211100110023332210246754
Q gi|254780396|r 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192 (317)
Q Consensus 113 ~~~~~~~~~~~l~~~g~t~~~~~~~i~~~l~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (317)
+++..+.+...+...+++...+++.++..+.+..+........+..+...+...+..........+...+..+..+....
T Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (167)
T 2itk_A 3 HGMADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKI 82 (167)
T ss_dssp --------CCTTEEEEECTTTCCEEEEETTTCCEESSCCC------------CCSCEEEEEEEECCTTSSSCCCSSCSSC
T ss_pred CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 88888889998848988288895788726776377663256653334543333554443321476326567744233332
Q ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCCCCHHHCCHHHHH-HCCCCCCCCCCCEEECCEEEE
Q ss_conf 44-799998643578865223324899-998520132256874675275561367665-112457880123763894899
Q gi|254780396|r 193 QN-QGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269 (317)
Q Consensus 193 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~lg~~~~~~l~~~~~~-~~~~~~G~is~pv~t~~G~hi 269 (317)
.. .......+............+... +..++.+++...||++||+..++++|.|.+ ++++++|++|+||+|++||||
T Consensus 83 ~~~~~~~~~~a~~~~~~l~~g~~f~~~aa~~~s~~~sa~~gG~lg~~~~~~l~~~~~~~~~~l~~Geis~pi~t~~G~~i 162 (167)
T 2itk_A 83 TRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHI 162 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTSSCHHHHHHHHHSCTTCBCCCEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCEEE
T ss_conf 00299999999999998750212499999870778543322011135434346999999981899983787886991799
Q ss_pred EEEEC
Q ss_conf 99822
Q gi|254780396|r 270 IAICD 274 (317)
Q Consensus 270 ikv~~ 274 (317)
|+|+|
T Consensus 163 ikv~d 167 (167)
T 2itk_A 163 ILRTE 167 (167)
T ss_dssp EEECC
T ss_pred EEEEC
T ss_conf 99949