HHsearch alignment of GI: 254780396 and MMDB domain: 2itk_A_

>2itk_A (A:) Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; PIN1, isomerase, WW domain; HET: D11 NAL PE4; 1.45A {Homo sapiens}
Probab=99.53  E-value=7.1e-17  Score=125.20  Aligned_cols=162  Identities=9%  Similarity=-0.006  Sum_probs=112.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
Q ss_conf             13430356777765311245546999999899999999843203555899986443211100110023332210246754
Q gi|254780396|r  113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL  192 (317)
Q Consensus       113 ~~~~~~~~~~~l~~~g~t~~~~~~~i~~~l~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (317)
                      +++..+.+...+...+++...+++.++..+.+..+........+..+...+...+..........+...+..+..+....
T Consensus         3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (167)
T 2itk_A            3 HGMADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKI   82 (167)
T ss_dssp             --------CCTTEEEEECTTTCCEEEEETTTCCEESSCCC------------CCSCEEEEEEEECCTTSSSCCCSSCSSC
T ss_pred             CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf             88888889998848988288895788726776377663256653334543333554443321476326567744233332


Q ss_pred             CC-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCCCCCHHHCCHHHHH-HCCCCCCCCCCCEEECCEEEE
Q ss_conf             44-799998643578865223324899-998520132256874675275561367665-112457880123763894899
Q gi|254780396|r  193 QN-QGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY  269 (317)
Q Consensus       193 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~lg~~~~~~l~~~~~~-~~~~~~G~is~pv~t~~G~hi  269 (317)
                      .. .......+............+... +..++.+++...||++||+..++++|.|.+ ++++++|++|+||+|++||||
T Consensus        83 ~~~~~~~~~~a~~~~~~l~~g~~f~~~aa~~~s~~~sa~~gG~lg~~~~~~l~~~~~~~~~~l~~Geis~pi~t~~G~~i  162 (167)
T 2itk_A           83 TRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHI  162 (167)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHCSSGGGGGTTEEEEECTTSSCHHHHHHHHHSCTTCBCCCEEETTEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCEEE
T ss_conf             00299999999999998750212499999870778543322011135434346999999981899983787886991799


Q ss_pred             EEEEC
Q ss_conf             99822
Q gi|254780396|r  270 IAICD  274 (317)
Q Consensus       270 ikv~~  274 (317)
                      |+|+|
T Consensus       163 ikv~d  167 (167)
T 2itk_A          163 ILRTE  167 (167)
T ss_dssp             EEECC
T ss_pred             EEEEC
T ss_conf             99949