HHsearch alignment of GI: 254780396 and MMDB domain: 2nsa_A_
>2nsa_A (A:) Trigger factor, TF; chaperone; 1.70A {Thermotoga maritima}
Probab=98.14 E-value=4.7e-05 Score=50.38 Aligned_cols=103 Identities=10% Similarity=0.085 Sum_probs=83.5
Q ss_pred CCEECCHHHHHHHHHHHHH----HC--------------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 8678688999999999873----03--------------50359999999999999998642001223444566899999
Q gi|254780396|r 47 NGEVITDGDISKRIALLKL----QK--------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108 (317)
Q Consensus 47 ng~~It~~e~~~~~~~~~~----~~--------------~~~~~~~~~l~~LI~~~l~~~~a~~~~i~v~~~~i~~~i~~ 108 (317)
...+|+.+-+++.+..... +. -...++.++++.++...++.+.|++.||.|+++++++.+..
T Consensus 41 ~~~~iP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~a~~~lk~~lil~~ia~~e~I~Vs~eei~~~i~~ 120 (170)
T 2nsa_A 41 VEIEISDRTLEILVNEAINRLKREGRYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEE 120 (170)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 88899889999999999999999876455554424689888889999999999999999999885788999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99731343035677776531124554699999989999999
Q gi|254780396|r 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149 (317)
Q Consensus 109 ~~~~~~~~~~~~~~~l~~~g~t~~~~~~~i~~~l~~~~~~~ 149 (317)
++.++|.+.+.+...+..+|.....+++.+..+..+..++.
T Consensus 121 ~a~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~kv~~~l~~ 161 (170)
T 2nsa_A 121 LAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQ 161 (170)
T ss_dssp HHHHHTSCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99886999999999998588999999999999999999999