HHsearch results for GI: 254780396 and protein with PDBid: 1j6y_A
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=99.39 E-value=6.8e-14 Score=105.37 Aligned_cols=101 Identities=9% Similarity=0.063 Sum_probs=74.4
Q ss_pred CCCCHHHHHHHHHCCCCC--------------CCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 011002333221024675--------------4447999986435788652-2332489999852013225687467527
Q gi|254780396|r 174 TVREYLIRTVLFSIPDNK--------------LQNQGFVQKRIKDAEESRL-RLPKDCNKLEKFASKIHDVSIGKAQYLL 238 (317)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~lg~~~ 238 (317)
....++++||++...... ....+.....+.+...... ....|...+..+|++++...||++||+.
T Consensus 23 ~~e~vr~sHILi~~~~~~~~~~~~~~~~~~~~~~t~~~A~~~~~~i~~~i~~g~~~F~~lA~~~Sd~~sa~~GG~LG~~~ 102 (139)
T 1j6y_A 23 SRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFG 102 (139)
T ss_dssp SCCSCEEECCEECSCTTSSSSSCSCCCSCCCSCCCHHHHHHHHHHHHHHHHSSCCCCHHHHHHSSCHHHHHTCSEEEECS
T ss_pred CCCEEEEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEC
T ss_conf 80138999999805776562110132211112000999999999999999808668999999958421012488562364
Q ss_pred HHHCCHHHHH-HCCCCCCCCCCCEEECCEEEEEEEEC
Q ss_conf 5561367665-11245788012376389489999822
Q gi|254780396|r 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274 (317)
Q Consensus 239 ~~~l~~~~~~-~~~~~~G~is~pv~t~~G~hiikv~~ 274 (317)
.++++|.|.+ ++.+++|++|+||+|++|||||+|+.
T Consensus 103 ~~~l~~ef~~a~~~l~~GeiS~pi~t~~G~HIikvtA 139 (139)
T 1j6y_A 103 RGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 139 (139)
T ss_dssp SSSSCTHHHHHHHHCCSSSCCSCEEETTEEECCCSCC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEEEC
T ss_conf 6655407999998389998487678289279999949