HHsearch results for GI: 254780396 and protein with PDBid: 1m5y_A
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=100.00 E-value=2.1e-38 Score=260.58 Aligned_cols=280 Identities=15% Similarity=0.233 Sum_probs=222.9
Q ss_pred CCCCCCEEEEECCEECCHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 11348269998867868899999999987303--------5035999999999999999864200122344456689999
Q gi|254780396|r 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107 (317)
Q Consensus 36 ~~~~~~vvA~Vng~~It~~e~~~~~~~~~~~~--------~~~~~~~~~l~~LI~~~l~~~~a~~~~i~v~~~~i~~~i~ 107 (317)
+...++|||+|||++||.+||++++..+..+. ....+++++|++||++.|+.++|+++|+.|+++++++++.
T Consensus 2 ~~~~~~ivA~Vng~~It~~d~~~~~~~~~~~~~~~~~~~~~~~~lr~qvl~~LI~~~Ll~q~A~~lgi~vsd~ev~~~i~ 81 (408)
T 1m5y_A 2 PQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIA 81 (408)
T ss_dssp ---CCCEEEEESSSEEEHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEEEECCEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 85347179999999628999999999999987632467984599999999999999999999998499979999999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC------------
Q ss_conf 99973134303567777653112455469999998999999998432035558999864432111001------------
Q gi|254780396|r 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV------------ 175 (317)
Q Consensus 108 ~~~~~~~~~~~~~~~~l~~~g~t~~~~~~~i~~~l~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~~~~------------ 175 (317)
.+..+++++.+.+.+.|...|+++..|++.++.++.|.++....+.+.+.+++.++..++........
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 161 (408)
T 1m5y_A 82 NIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILI 161 (408)
T ss_dssp HHHHHTTCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCTTHHHHHHHCC-------CCEEEEEEEE
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHC
T ss_conf 99987142378899999973888788888788999999988665321014663567899987431013310332111101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780396|r 176 -------------------------------------------------------------------------------- 175 (317)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (317)
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~g~i~~~~~~ 241 (408)
T 1m5y_A 162 PLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRS 241 (408)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHTGGGTCCTTCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 23331016789998877899999875100499998871236265526863323301100167888765135764454235
Q ss_pred ---------------------CCHHHHHHHHHCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCC-CCCCCC
Q ss_conf ---------------------100233322102467544479999864357-886522332489999852013-225687
Q gi|254780396|r 176 ---------------------REYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKI-HDVSIG 232 (317)
Q Consensus 176 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~g 232 (317)
..+.++|+++..... ............. .........++..+..++.++ +...||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~il~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~F~~~a~~~s~d~~s~~~gg 319 (408)
T 1m5y_A 242 GVGFHILKVNDLRGESKNISVTEVHARHILLKPSPI--MTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGG 319 (408)
T ss_dssp TTEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCSS--SCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCC
T ss_conf 542799999987621001333202034444148776--333899999999999987263238999998288955042057
Q ss_pred CCCCCCHHHCCHHHHH-HCCCCCCCCCCCEEECCEEEEEEEECCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4675275561367665-11245788012376389489999822357884-457899999999999999999999999997
Q gi|254780396|r 233 KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310 (317)
Q Consensus 233 ~lg~~~~~~l~~~~~~-~~~~~~G~is~pv~t~~G~hiikv~~~r~~~~-~~~~~~~i~~~l~~~~~~~~~~~~l~~Lr~ 310 (317)
++||+..+.++|.|.. ++.+++|++|+||+|++|||||+|+++++... +...++.|+..|.+++..+.+..|+++||+
T Consensus 320 ~lg~~~~~~~~~~~~~ai~~l~~G~is~pv~t~~G~hii~v~~~~~~~~~~~~~~~~i~~~l~~~k~~~~~~~~l~~lr~ 399 (408)
T 1m5y_A 320 DLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRA 399 (408)
T ss_dssp EEEEECGGGSCHHHHHHHHTCCTTCBCCCEECSSCEEEEEEEEEEECC--------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56667745478899999981899990874783884899999874068887465799999999999999999999999984
Q ss_pred HCCCCCC
Q ss_conf 5477509
Q gi|254780396|r 311 NAIIHYY 317 (317)
Q Consensus 311 ~A~I~~f 317 (317)
+|.|++.
T Consensus 400 ~a~I~i~ 406 (408)
T 1m5y_A 400 SAYVKIL 406 (408)
T ss_dssp HSCEEEC
T ss_pred CCEEEEE
T ss_conf 5928873