HHSEARCH alignment of GI: 254780396 and SCOP domain: d1m5ya3

Alignment
>d1m5ya3 d.26.1.1 (A:279-386) Porin chaperone SurA, PPIase domains {Escherichia coli [TaxId: 562]}
Probab=99.54  E-value=4.2e-15  Score=111.51  Aligned_cols=102  Identities=14%  Similarity=0.208  Sum_probs=77.7

Q ss_pred             CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHCCHHHHH-HCC
Q ss_conf             1100233322102467544479999864357886-522332489999852013-2256874675275561367665-112
Q gi|254780396|r  175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-RLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLK  251 (317)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~g~lg~~~~~~l~~~~~~-~~~  251 (317)
                      .+++.++||++........  +............ ......|...+..+|.+. +...||++||+..+.+|+.|.. +++
T Consensus         4 ~tev~vrHILi~~~~~~~~--~~a~~~~~~i~~~l~~~~~~F~~lA~~~S~d~~~~~~gG~lgw~~~~~l~~~~~~~~~~   81 (108)
T d1m5ya3           4 VTEVHARHILLKPSPIMTD--EQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTR   81 (108)
T ss_dssp             CEEEEEEEEEECCCSSSCH--HHHHHHHHHHHHHHHTTSSCHHHHHHHHCCCTTTGGGTTEEEEECGGGSCHHHHHHHHT
T ss_pred             CCEEEEEEEEECCCCCCCH--HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             3289999999828999999--99999999999999838552999998717587644333211212211024799999985


Q ss_pred             CCCCCCCCCEEECCEEEEEEEECCCCC
Q ss_conf             457880123763894899998223578
Q gi|254780396|r  252 KSQNNTTNPYVTQKGVEYIAICDKRDL  278 (317)
Q Consensus       252 ~~~G~is~pv~t~~G~hiikv~~~r~~  278 (317)
                      +++|++|+||+|++||||++|+++|.+
T Consensus        82 l~~GeiS~pi~t~~G~hIikl~~~r~v  108 (108)
T d1m5ya3          82 LNKGQMSAPVHSSFGWHLIELLDTRNV  108 (108)
T ss_dssp             CCTTCBCCCEECSSCEEEEEEEEEEEC
T ss_pred             CCCCCCCCCEEECCEEEEEEEEEEECC
T ss_conf             799987862895998899999778439


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Porin chaperone SurA, PPIase domains
species: Escherichia coli [TaxId: 562]