BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780396|ref|YP_003064809.1| peptidyl-prolyl cis-trans
isomerase protein [Candidatus Liberibacter asiaticus str. psy62]
(317 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780396|ref|YP_003064809.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040073|gb|ACT56869.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter asiaticus str. psy62]
Length = 317
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI
Sbjct: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF
Sbjct: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI
Sbjct: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES
Sbjct: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH
Sbjct: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
Query: 301 EAEYVKKLRSNAIIHYY 317
EAEYVKKLRSNAIIHYY
Sbjct: 301 EAEYVKKLRSNAIIHYY 317
>gi|315122192|ref|YP_004062681.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495594|gb|ADR52193.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 315
Score = 351 bits (900), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 184/312 (58%), Positives = 241/312 (77%), Gaps = 5/312 (1%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
+S + F KLL VLI C P Y+S A+SS+I T+NGE ITDGDISKRIA LKL+
Sbjct: 7 SSFNGFSKLLAVCVVLIA-CFYP---YESSAISSQISITVNGEAITDGDISKRIAFLKLR 62
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
KING+L+KIA QELI E LKKQE E GI + N++NYFF Q+ARNTG+SAE+FS L+
Sbjct: 63 KINGDLKKIAKQELIAEALKKQESEGFGIILNPNSMNYFFAQYARNTGISAEEFSDMLEH 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF 185
GIG+NHFKQYLAIQ W ++V+N F++KY L ME+P + K + KN+TVREYL++ ++F
Sbjct: 123 LGIGENHFKQYLAIQLAWDEIVRNTFIMKYRGLGMEMPPSIKGRGKNLTVREYLVKKIIF 182
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
S+P NK +N+ F+QKRI +AE+SR P +CN++E+FAS +HDVS+ QY LESDL PQ
Sbjct: 183 SVPYNKHKNEDFIQKRIDEAEKSRFHFPTNCNRVEEFASAMHDVSVSNPQYFLESDLQPQ 242
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ LLKK++NNTTN YVT+KGVEYIAIC+ RD+GGE+ALKAY + Q P K++K++ EY+
Sbjct: 243 LKILLKKTKNNTTNTYVTEKGVEYIAICNIRDIGGELALKAYFNTQEIPKKMKKYDEEYM 302
Query: 306 KKLRSNAIIHYY 317
K LR+NAII +Y
Sbjct: 303 KTLRANAIIQFY 314
>gi|222085450|ref|YP_002543980.1| peptidyl-prolyl cis-trans isomerase protein [Agrobacterium
radiobacter K84]
gi|221722898|gb|ACM26054.1| peptidyl-prolyl cis-trans isomerase protein [Agrobacterium
radiobacter K84]
Length = 316
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 161/286 (56%), Gaps = 12/286 (4%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +N VIT GDI+KRI LKLQ G+L K+A ++L+ ETLK+ EI + ++
Sbjct: 34 ASEVKVVVNNSVITSGDIAKRINFLKLQHQKGDLNKLAQEQLVDETLKRAEISRVRMSVS 93
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
++ V+ F + A + +S + LDK G+G +HFK Y+A+ WP VV F GN
Sbjct: 94 TSDVDSAFGRFAASNKMSPQQLGQILDKMGVGVDHFKSYIAVSMSWPRVVNARFGSSGGN 153
Query: 159 L----EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
++ + K K +T EY ++ ++F +P K + +R +AE SR + P
Sbjct: 154 KLSNDDLVTRMTENKTKPVTT-EYFLKQIVFVVPQAK--RNAILNQRKSEAEASRAKFP- 209
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
C++ + FA+ + DVS+ +L DL ++ LL++++ NTT P VT +GVEY+AIC
Sbjct: 210 GCDQAKVFAATMRDVSVQDLGRVLAPDLPEIWKPLLEQAKGNTTTPVVTDRGVEYVAICS 269
Query: 275 KRDLGGEIALKAYLSAQN----TPTKIEKHEAEYVKKLRSNAIIHY 316
+R + ++A A A++ I ++ +Y+ +LRS A I Y
Sbjct: 270 QRQVNDDVAAAAVFRAEDIGKAGAQGISANDKKYMDELRSKAQILY 315
>gi|86357089|ref|YP_468981.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli CFN 42]
gi|86281191|gb|ABC90254.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli CFN 42]
Length = 314
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 169/320 (52%), Gaps = 23/320 (7%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
D K +T + ++ ++ + A S ++ +NG IT GD++KR A L+LQ
Sbjct: 3 DAKKAITAFLAGAAIALLTGLAGPALAASG-VQAVVNGTAITSGDVAKRQAFLRLQHTKA 61
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K A ++LI ETLK+QE+ + ++ V+ F + + LS E S LD+ G+G
Sbjct: 62 DA-KTATEQLIDETLKRQEVARVHMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVG 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDF-----MLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+HFK ++A+Q WP VV + + Y + + NKQK EY+++ ++F
Sbjct: 121 VDHFKGFIAVQMSWPRVVNARYGSTSRLSNYDLVSRMMQNNKQK---PVTTEYMLQQIIF 177
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
IP+ K KR +AE SR + P C++ + FA+ + DVS+ +L ++ P
Sbjct: 178 VIPEAK--RGAITGKRKGEAEASRSKFP-GCDQAKTFAATMRDVSVRDLGRMLAPEIPPD 234
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA---------LKAYLSAQNTPTK 296
+++L+++++ NTT VT+KGVEY+AIC +R + + A L + +N P +
Sbjct: 235 WKSLVEQAKGNTTGTRVTEKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPE 294
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
E + +Y+ +LR A I Y
Sbjct: 295 NENSK-KYLDELRKKAQIAY 313
>gi|218671035|ref|ZP_03520706.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli GR56]
Length = 314
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 159/292 (54%), Gaps = 22/292 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++
Sbjct: 30 ASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVRMSVS 88
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 89 QQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRL 148
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQ K +T EY+++ ++F IP K KR +AE SR + P
Sbjct: 149 SNYDLVSRMMQNNKQ--KPVTT-EYMLQQIIFVIPQAK--RAAITGKRKGEAEASRSKFP 203
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 204 -GCDQAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 262
Query: 274 DKRDLGGEIA---------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + + A L +A+N P + E + +Y+ +LR A I Y
Sbjct: 263 SQRQVSDDQAAEMVFRQEDLDKSKAAKNGPPENENSK-KYLDELRKKAQIAY 313
>gi|218461597|ref|ZP_03501688.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli Kim 5]
Length = 313
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 158/292 (54%), Gaps = 22/292 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++
Sbjct: 29 ASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVRMSVS 87
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 88 QQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRL 147
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQ K +T EY+++ ++F IP K KR +AE SR + P
Sbjct: 148 SNYDLVSRMMQNNKQ--KPVTT-EYMLQQIIFVIPQAK--RAAITGKRKGEAEASRSKFP 202
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 203 -GCDQSKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 261
Query: 274 DKRDLGGEIA---------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + + A L + +N P + E + +Y+ +LR A I Y
Sbjct: 262 SQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSK-KYLDELRKKAQIAY 312
>gi|218661101|ref|ZP_03517031.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli IE4771]
Length = 295
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 158/292 (54%), Gaps = 22/292 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++
Sbjct: 11 ASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVRMSVS 69
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 70 QQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRL 129
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQ K +T EY+++ ++F IP K KR +AE SR + P
Sbjct: 130 SNYDLVSRMMQNNKQ--KPVTT-EYMLQQIIFVIPQAK--RAAITGKRKGEAEASRSKFP 184
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 185 -GCDQSKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 243
Query: 274 DKRDLGGEIA---------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + + A L + +N P + E + +Y+ +LR A I Y
Sbjct: 244 SQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSK-KYLDELRKKAQIAY 294
>gi|327188010|gb|EGE55240.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli CNPAF512]
Length = 314
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 22/292 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++
Sbjct: 30 ASEVQAVVNGTAITSGDVAKRQAFLRLQHTAADA-KTAKEQLIDETLKRQEVARVHMSVS 88
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 89 QQDVDASFARFSAGNKLSVAQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTTRL 148
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQK EY+++ ++F IP+ K KR +AE SR + P
Sbjct: 149 SNYDLVSRMMQNNKQK---PVTTEYMLQQIIFVIPEAK--RGAITGKRKGEAEASRSKFP 203
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 204 -GCDQAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 262
Query: 274 DKRDLGGEIA---------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + + A L + +N P + E + +Y+ +LR A I Y
Sbjct: 263 SQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSK-KYLDELRKKAQIAY 313
>gi|150395986|ref|YP_001326453.1| SurA domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027501|gb|ABR59618.1| SurA domain [Sinorhizobium medicae WSM419]
Length = 315
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 21/287 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S + +NG VIT GD++KR+A L+LQ+ +G + A Q+L+ E LK+ EI + + +
Sbjct: 35 SSVEVVVNGTVITSGDVAKRVAFLRLQRQSGGAAE-AKQQLVDEVLKRAEIARVQQSVST 93
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK----NDFMLK 155
+ V+ F + A LS E L++ G+G +HFKQY+A+Q WP VV N L
Sbjct: 94 DEVDAAFARFASGNKLSPEQLGKILEQAGVGIDHFKQYIAVQMSWPRVVNFRYGNASRLS 153
Query: 156 YGNL---EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
G+L M+ NK EY ++ V+F IP++K KR +A SR +
Sbjct: 154 GGDLVKRMMQGGGNKP-----VTTEYFLQQVIFVIPESK--RGAITAKRQAEANASRSKF 206
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIA 271
P C+ + FA+ DVSI +L L ++ L++K+ ++ TT VT+KGVEY+A
Sbjct: 207 P-GCDTSKAFAANYRDVSIRSLGRILAQQLPEDWKPLVEKAGDSMTTGTRVTEKGVEYLA 265
Query: 272 ICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
IC KR D EI +A + + + A+Y+++LRS A I
Sbjct: 266 ICKKRQVNDDAAAEIVFRAEDLGKKKSGGEDPNSAKYLEELRSKAQI 312
>gi|209548668|ref|YP_002280585.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534424|gb|ACI54359.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 314
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 154/291 (52%), Gaps = 20/291 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A ++LQ + K A ++LI ETLK+QE+ + ++
Sbjct: 30 ASEVKAVVNGTAITSGDVAKRQAFMRLQHTKADA-KAAEEQLIDETLKRQEVSRVHMSVS 88
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 89 QQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRL 148
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQ K +T EY+++ ++F IP K KR +AE SR + P
Sbjct: 149 SNYDLVSRMMQNNKQ--KPVTT-EYMLQQIIFVIPQAK--RNAITGKRKGEAEASRSKFP 203
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DVS+ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 204 -GCDQAKVFAATMRDVSVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 262
Query: 274 DKR----DLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHY 316
+R D E+ + + K E E Y+ +LR A I Y
Sbjct: 263 SQRQVSDDQAAEMVFRQEDLGKAKGGKDASPENENSKKYLDELRKKAQIAY 313
>gi|190891133|ref|YP_001977675.1| peptidyl-prolyl cis-trans isomerase [Rhizobium etli CIAT 652]
gi|218517103|ref|ZP_03513943.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli 8C-3]
gi|190696412|gb|ACE90497.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli CIAT 652]
Length = 314
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 158/292 (54%), Gaps = 22/292 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ + ++
Sbjct: 30 ASEVQAVVNGTAITSGDVAKRQAFLRLQHTAADA-KTAKEQLIDETLKRQEVARVHMSVS 88
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 89 QQDVDASFARFSAGNKLSVAQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRL 148
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQ K +T EY+++ ++F IP+ K KR +AE SR + P
Sbjct: 149 SNYDLVSRMMQNNKQ--KPVTT-EYMLQQIIFVIPEAK--RGAITGKRKGEAEASRSKFP 203
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 204 -GCDQAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 262
Query: 274 DKRDLGGEIA---------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + + A L + +N P + + + +Y+ +LR A I Y
Sbjct: 263 SQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENDNSK-KYLDELRKKAQIAY 313
>gi|222148150|ref|YP_002549107.1| hypothetical protein Avi_1539 [Agrobacterium vitis S4]
gi|221735138|gb|ACM36101.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 315
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 150/279 (53%), Gaps = 10/279 (3%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ +N IT+ D+++RIA LKL+ G++ K A QELI E LK+QEI + G++ +
Sbjct: 38 VAVVVNKTAITNTDLARRIAFLKLRHETGDVAKKARQELIDEQLKRQEIARVGMSVSTMD 97
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM--LKYGNL 159
V+ F + A + LS + LDK G+G HFK Y+A+Q WP +V + K N
Sbjct: 98 VDQAFGRFAASNKLSTQQMGQILDKAGVGVEHFKAYIAVQMSWPRLVNARYASRSKMSNQ 157
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+M + K K +T EY ++ V+F +P K KR +AE SR + P C++
Sbjct: 158 DMVTRLLENKQKPVTT-EYTLKQVIFVVPVAKRAT--LTAKRKAEAEASRAKFP-GCDQA 213
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--- 276
FA DVSI +++ +L ++ L++ + TT VT++G+EY+AIC+++
Sbjct: 214 MDFAKNYLDVSIRDLGRVMKPELPDDWKPLIEGANGTTTGTRVTERGIEYLAICNQKQVS 273
Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
DL E KA + +K + + +Y+ +LRS A I
Sbjct: 274 DDLAAEAVFKAEDIGKEDKSKGDPNSEKYLTELRSKAQI 312
>gi|116251332|ref|YP_767170.1| hypothetical protein RL1566 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255980|emb|CAK07061.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 314
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 153/290 (52%), Gaps = 20/290 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S ++ +NG IT GD++KR A L+LQ + K A ++LI E LK+QE+ + ++
Sbjct: 31 SEVKAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAEEQLIDEALKRQEVARVRMSVSQ 89
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----ML 154
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 90 QDVDASFARFSSGNKLSPEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRLS 149
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
Y + + NKQ K +T EY+++ ++F IP K KR +AE SR + P
Sbjct: 150 NYDLVSRMMQNNKQ--KPVTT-EYMLQQIIFVIPQAK--RGAITGKRKGEAEASRSKFP- 203
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
C++ + FA+ + DVS+ LL ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 204 GCDQAKVFAATMRDVSVRDLGRLLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICS 263
Query: 275 KR----DLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHY 316
+R D E+ + ++ K E E Y+ +LR A I Y
Sbjct: 264 QRQVSDDQAAEMVFRQEDLDKSKAGKDASPENENSKKYLDELRKKAQIAY 313
>gi|241203946|ref|YP_002975042.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240857836|gb|ACS55503.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 314
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 154/291 (52%), Gaps = 20/291 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S ++ +NG IT GD++KR A L+LQ + K A ++LI E LK+QE+ + ++
Sbjct: 30 ASEVKAVVNGTAITSGDVAKRQAFLRLQHTKADA-KAAEEQLIDEALKRQEVTRVHMSVS 88
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-----M 153
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV + +
Sbjct: 89 QQDVDASFARFSSGNKLSPEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRL 148
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
Y + + NKQ K +T EY+++ V+F IP K KR +AE SR + P
Sbjct: 149 SNYDLVSRMMQNNKQ--KPVTT-EYMLQQVIFVIPQAK--RGAITGKRKGEAEASRSKFP 203
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
C++ + FA+ + DVS+ +L ++ P ++ L+++++ NTT VT KGVEY+AIC
Sbjct: 204 -GCDQAKVFAATMRDVSVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAIC 262
Query: 274 DKR----DLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHY 316
+R D E+ + ++ K E E Y+ +LR A I Y
Sbjct: 263 SQRQVSDDQAAEMVFRQEDLDKSKGGKDASPENENSKKYLDELRKKAQIAY 313
>gi|307300974|ref|ZP_07580743.1| SurA domain protein [Sinorhizobium meliloti BL225C]
gi|307317709|ref|ZP_07597147.1| SurA domain protein [Sinorhizobium meliloti AK83]
gi|306896471|gb|EFN27219.1| SurA domain protein [Sinorhizobium meliloti AK83]
gi|306903929|gb|EFN34515.1| SurA domain protein [Sinorhizobium meliloti BL225C]
Length = 315
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 163/315 (51%), Gaps = 22/315 (6%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
++LL+ + + + A S+ + +N VIT GD++KR+A LKLQ+ +G
Sbjct: 8 IVRLLSAVALAGALSVAAGTVTTAMAAST-VEVVVNSTVITSGDVAKRVAFLKLQRQSGG 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ A Q+L+ E LK+ EI + + ++ V+ F + A LS E LD+ G+G
Sbjct: 67 AAE-AKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFAAGNKLSPEQLGKILDQAGVGV 125
Query: 132 NHFKQYLAIQSIWPDVVKNDF----MLKYGNL---EMEIPANKQKMKNITVREYLIRTVL 184
+HFKQY+A+Q WP VV + L G+L M+ NK EY ++ V+
Sbjct: 126 DHFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMQGGGNKP-----VTTEYFLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F IP++K KR +A SR + P C+ + FA+ DVSI +L L
Sbjct: 181 FVIPESK--RGAITAKRQAEANASRSQFP-GCDTSKAFAANYRDVSIRSLGRILAQQLPE 237
Query: 245 QFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-- 301
++ L++K+ + TT VT+KGVEY+AIC KR + + A + A++ K + E
Sbjct: 238 DWKPLVEKAGDGMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSEGEDP 297
Query: 302 --AEYVKKLRSNAII 314
A+Y+++LRS A I
Sbjct: 298 NSAKYLEELRSKAQI 312
>gi|15964904|ref|NP_385257.1| hypothetical protein SMc00581 [Sinorhizobium meliloti 1021]
gi|15074083|emb|CAC45730.1| Hypothetical protein SMc00581 [Sinorhizobium meliloti 1021]
Length = 316
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 163/315 (51%), Gaps = 22/315 (6%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
++LL+ + + + A S+ + +N VIT GD++KR+A LKLQ+ +G
Sbjct: 9 IVRLLSAVALAGALSVAAGTVTTAMAAST-VEVVVNSTVITSGDVAKRVAFLKLQRQSGG 67
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ A Q+L+ E LK+ EI + + ++ V+ F + A LS E LD+ G+G
Sbjct: 68 AAE-AKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFAAGNKLSPEQLGKILDQAGVGV 126
Query: 132 NHFKQYLAIQSIWPDVVKNDF----MLKYGNL---EMEIPANKQKMKNITVREYLIRTVL 184
+HFKQY+A+Q WP VV + L G+L M+ NK EY ++ V+
Sbjct: 127 DHFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMQGGGNKP-----VTTEYFLQQVI 181
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F IP++K KR +A SR + P C+ + FA+ DVSI +L L
Sbjct: 182 FVIPESK--RGAITAKRQAEANASRSQFP-GCDTSKAFAANYRDVSIRSLGRILAQQLPE 238
Query: 245 QFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-- 301
++ L++K+ + TT VT+KGVEY+AIC KR + + A + A++ K + E
Sbjct: 239 DWKPLVEKAGDGMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSEGEDP 298
Query: 302 --AEYVKKLRSNAII 314
A+Y+++LRS A I
Sbjct: 299 NSAKYLEELRSKAQI 313
>gi|227821473|ref|YP_002825443.1| putative survival protein SurA, probable peptidyl-prolyl cis-trans
isomerase protein [Sinorhizobium fredii NGR234]
gi|227340472|gb|ACP24690.1| putative survival protein SurA, probable peptidyl-prolyl cis-trans
isomerase protein [Sinorhizobium fredii NGR234]
Length = 312
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 159/314 (50%), Gaps = 21/314 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I ++ L + ++ I S + +S ++ +N VIT GDI+KR+A L+LQ+ G
Sbjct: 5 ISIVRALSALAVAGVLSIASGAAVQAASGVKVIVNSTVITSGDIAKRVAFLRLQRQGGGA 64
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A ++L+ E LK+ EI + + + V+ + + A LS E LD+ G+G
Sbjct: 65 AE-AEKQLVDEVLKRAEIARVQQSVSTQEVDAAYARFAAGNKLSTEQLGKILDQSGVGIE 123
Query: 133 HFKQYLAIQSIWPDVVKNDF----MLKYGNL---EMEIPANKQKMKNITVREYLIRTVLF 185
HFKQY+A+Q WP VV + L G+L ME NK EY ++ V+F
Sbjct: 124 HFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMEGGGNKP-----VTTEYFLQQVIF 178
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
IP++K KR +A SR + P C + FA+ DVSI +L L
Sbjct: 179 VIPESK--RGAITAKRQAEANASRSQFP-GCETSKAFAANYRDVSIRSLGRVLAQQLPED 235
Query: 246 FQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--- 301
++ L++K+ + TT VT+KGVEY+AIC KR + + A + A++ K E
Sbjct: 236 WKPLVEKAGDGTTTGTRVTEKGVEYLAICKKRQVNDDAAAEVVFRAEDIGKKKAGGEDPN 295
Query: 302 -AEYVKKLRSNAII 314
+Y+++LRS A I
Sbjct: 296 SEKYLEELRSKAQI 309
>gi|15888445|ref|NP_354126.1| hypothetical protein Atu1105 [Agrobacterium tumefaciens str. C58]
gi|15156137|gb|AAK86911.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 315
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 160/295 (54%), Gaps = 17/295 (5%)
Query: 30 IVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+V Y A + S ++ +N IT+ DI++R+A LKLQ+ +G L + A ++L+ E LK++
Sbjct: 25 VVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLNEKAREQLVDEALKRE 84
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
EI + ++ + V+ F + A N + E + L + G+G HFK ++A+Q WP +V
Sbjct: 85 EIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVLAQAGVGAEHFKAFIAVQMSWPRLV 144
Query: 149 KNDFML--KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ K N ++ ++ K +T EY ++ V+F IP+ K KR +AE
Sbjct: 145 NARYGARGKMSNQDLVTRLKERGEKPVTT-EYFLQQVIFVIPEAK--RNAITGKRKAEAE 201
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQK 265
SR R P C++ FA+ + DV+I +L +L ++ L++K+ + TT VT+K
Sbjct: 202 ASRKRYP-GCDQAMSFAATMRDVAIKDLGRILAPELPEDWKALVEKTKEGGTTGTRVTEK 260
Query: 266 GVEYIAICDKR----DLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAII 314
GVEY+AIC +R D E+ K+ + A++ EK +Y+++LR A I
Sbjct: 261 GVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEK---KYIEELRKKAQI 312
>gi|325292484|ref|YP_004278348.1| survival protein surA precursor / peptidyl-prolyl cis-trans
isomerase SurA [Agrobacterium sp. H13-3]
gi|325060337|gb|ADY64028.1| putative survival protein surA precursor / peptidyl-prolyl
cis-trans isomerase SurA [Agrobacterium sp. H13-3]
Length = 315
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 165/298 (55%), Gaps = 12/298 (4%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ + P S +++A S+ ++ +N IT+ DI++R+A LKLQ+ +G L + A ++L+
Sbjct: 21 VPMAVAPFAS-QAFADST-VKIVVNKTPITNDDIARRVAFLKLQRQSGNLAEKAREQLVD 78
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E LK++EI + ++ + V+ F + A N ++ + + L K G+G +HFK ++A+Q
Sbjct: 79 EALKREEIGRVKMSVSTQEVDAAFARFAANNKMNPQQLTQILSKAGVGADHFKAFIAVQM 138
Query: 143 IWPDVVKNDFML--KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
WP +V + K N ++ ++ K +T EY ++ V+F IP++K K
Sbjct: 139 SWPRLVNARYGARGKMSNQDLVTRLRERGDKPVTT-EYFLQQVIFVIPESK--RNAITGK 195
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTN 259
R +AE SR R P C++ FA+ + DV+I +L +L +++ L++K+ + TT
Sbjct: 196 RKAEAEASRKRYP-GCDQAMTFAATMRDVAIKDLGRILAPELPEEWKPLVEKTKEGGTTG 254
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN---TPTKIEKHEAEYVKKLRSNAII 314
VT+KGVEY+AIC +R + + A + +++ +E +Y+ +LR A I
Sbjct: 255 TRVTEKGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKGGENPNEKKYMDELRKKAQI 312
>gi|90419499|ref|ZP_01227409.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336436|gb|EAS50177.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 346
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S I+ +NG IT I +R A L+L+++ G + A ELI E LKKQEI + GI
Sbjct: 66 ASEIKAVVNGMPITSYQIRQRAAFLQLRRVGGNATQKATDELIDEALKKQEIGRRGIAIP 125
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ F + A L+ E L + G + FK Y+ +Q W V+ +
Sbjct: 126 DEAVDEAFGRFAAENKLTREQLGQVLSRAGFSSDGFKDYIRVQMGWGQAVQANMRSTERL 185
Query: 159 LEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E ++ Q + + EY ++ V+F IPD Q + +R ++AE R R + C
Sbjct: 186 SEQDVVQRMLAQGGEKPSTTEYTLQQVIFVIPD--AQRSALMAQRKREAESMRSRF-QSC 242
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY-VTQKGVEYIAICDK 275
+FA + DV++ + + +L P+++ ++ + T P T++GVE+IA+C+
Sbjct: 243 ESTYEFAKGLRDVTVRDLGRVAQPELPPRWKKDIQATSVGRTTPAQATERGVEFIAVCNT 302
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
R++ + A A+ E+ E A Y+KKLR A I
Sbjct: 303 RNISDDKAAALVFQAREMEKLGEQAEPDAAYLKKLRDRAQI 343
>gi|163759133|ref|ZP_02166219.1| hypothetical protein HPDFL43_05195 [Hoeflea phototrophica DFL-43]
gi|162283537|gb|EDQ33822.1| hypothetical protein HPDFL43_05195 [Hoeflea phototrophica DFL-43]
Length = 283
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 145/280 (51%), Gaps = 6/280 (2%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+S I+ +N + IT DI++R+A L+LQ+ G L+ A ++LI E+LK QE +
Sbjct: 3 ASEIKIVVNKQAITSVDIARRVAFLRLQRTGGNLQAKAREQLIEESLKYQEALRIRAVVS 62
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
++ + + ++ LS + + L++ G+ HFK ++ +Q WP VV+ G
Sbjct: 63 QAQIDASYARFGKSNNLSVKQLNQVLNQAGVTPQHFKDFIRVQMSWPRVVQALEGTSGGG 122
Query: 159 LEMEIPANKQKMKN---ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + +K + + EY+++ V+F +P NK N + R ++AE+ R R +
Sbjct: 123 MSTQDLVSKMLERGDDKPSTTEYILQQVIFVVPSNKRSN-ATLNARKREAEQLRGRY-QG 180
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP-YVTQKGVEYIAICD 274
C + + DV++ +++ L P ++ L++K++ T P +T +GVE+I IC
Sbjct: 181 CENAAAAVTGLRDVTLRNLGRIMQPQLPPDWKPLIEKTEAGATTPTRITDRGVEFIVICS 240
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + + A + A+N+ + +++ KLR +A+I
Sbjct: 241 SKTVSDDRAAELVFRAENSDAGDSETAKKHLAKLRESAVI 280
>gi|153009931|ref|YP_001371146.1| SurA domain-containing protein [Ochrobactrum anthropi ATCC 49188]
gi|151561819|gb|ABS15317.1| SurA domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 319
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 12/312 (3%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F +L+ L V + ++ + A S ++ ++G IT+ DI R+A LKLQ+ G
Sbjct: 8 FASMLSAAVCLTTLGTVAVPAFAAGA-GSEVKVIVSGNAITNSDIQHRVAFLKLQRKGGN 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++A +EL E LK+ E++ I V+ + A +S + +++ G+
Sbjct: 67 LSQVAKEELTDEMLKRIEMKSRSINITDQQVDEAYAGFASRNKMSLAQLNQLMNQSGVTP 126
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPD 189
+HFK+Y+ +Q W +V F E E K K EY ++ V+F IP
Sbjct: 127 DHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKDGGKKPVATEYRLQQVIFVIPA 186
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+K ++ + KR ++A R R + C+ + A I DV++ ++E L ++
Sbjct: 187 SK-RSPALLSKRKQEANALRSRF-QSCDATRQQAKGILDVTVRDLGRIIEQQLPNEWAKA 244
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPT----KIEKHEA 302
+K S TT P T+KGVE++A+C R + + + S + ++P K E+
Sbjct: 245 VKATSVGGTTPPQETEKGVEFLAVCSTRQISDDRVAQLVFSMEGADSPAGQEKKAEQLSE 304
Query: 303 EYVKKLRSNAII 314
+Y+K+LR A I
Sbjct: 305 KYLKELREKATI 316
>gi|256044377|ref|ZP_05447281.1| survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase surA) [Brucella melitensis bv. 1 str. Rev.1]
gi|260563729|ref|ZP_05834215.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|260153745|gb|EEW88837.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. 16M]
Length = 318
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI VN + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSLGINISDKEVNDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|17987548|ref|NP_540182.1| survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase surA) [Brucella melitensis bv. 1 str. 16M]
gi|265990795|ref|ZP_06103352.1| SurA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17983251|gb|AAL52446.1| survival protein sura precursor (peptidyl-prolyl cis-trans
isomerase sura) [Brucella melitensis bv. 1 str. 16M]
gi|263001579|gb|EEZ14154.1| SurA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 317
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 2 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI VN + A ++ + +++ G
Sbjct: 62 SGNLNQLARNELTEEMLKRIEMKSLGINISDKEVNDAYAGFASRNKMTLAQLNQVMNQSG 121
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 122 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 179
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 180 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 237
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 238 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 297
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 298 EELSKKYVQELREKATI 314
>gi|225627181|ref|ZP_03785219.1| Chaperone surA precursor [Brucella ceti str. Cudo]
gi|260168435|ref|ZP_05755246.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella sp. F5/99]
gi|261757897|ref|ZP_06001606.1| SurA domain-containing protein [Brucella sp. F5/99]
gi|225618016|gb|EEH15060.1| Chaperone surA precursor [Brucella ceti str. Cudo]
gi|261737881|gb|EEY25877.1| SurA domain-containing protein [Brucella sp. F5/99]
Length = 318
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSVEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|254718820|ref|ZP_05180631.1| Chaperone surA precursor [Brucella sp. 83/13]
gi|265983805|ref|ZP_06096540.1| SurA domain-containing protein [Brucella sp. 83/13]
gi|264662397|gb|EEZ32658.1| SurA domain-containing protein [Brucella sp. 83/13]
Length = 318
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASLLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|306845285|ref|ZP_07477861.1| Chaperone surA precursor [Brucella sp. BO1]
gi|306274444|gb|EFM56251.1| Chaperone surA precursor [Brucella sp. BO1]
gi|326538427|gb|ADZ86642.1| chaperone surA precursor [Brucella melitensis M5-90]
Length = 317
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 2 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 62 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 121
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 122 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 179
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 180 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 237
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 238 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 297
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 298 EELSKKYVQELREKATI 314
>gi|23501571|ref|NP_697698.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330]
gi|62289646|ref|YP_221439.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str.
9-941]
gi|82699574|ref|YP_414148.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar
Abortus 2308]
gi|189023896|ref|YP_001934664.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus S19]
gi|225852204|ref|YP_002732437.1| chaperone SurA [Brucella melitensis ATCC 23457]
gi|237815137|ref|ZP_04594135.1| Chaperone surA precursor [Brucella abortus str. 2308 A]
gi|254697090|ref|ZP_05158918.1| Chaperone surA precursor [Brucella abortus bv. 2 str. 86/8/59]
gi|254701467|ref|ZP_05163295.1| Chaperone surA precursor [Brucella suis bv. 5 str. 513]
gi|254704014|ref|ZP_05165842.1| Chaperone surA precursor [Brucella suis bv. 3 str. 686]
gi|254707612|ref|ZP_05169440.1| Chaperone surA precursor [Brucella pinnipedialis M163/99/10]
gi|254709805|ref|ZP_05171616.1| Chaperone surA precursor [Brucella pinnipedialis B2/94]
gi|254713809|ref|ZP_05175620.1| Chaperone surA precursor [Brucella ceti M644/93/1]
gi|254717133|ref|ZP_05178944.1| Chaperone surA precursor [Brucella ceti M13/05/1]
gi|254729986|ref|ZP_05188564.1| Chaperone surA precursor [Brucella abortus bv. 4 str. 292]
gi|256031296|ref|ZP_05444910.1| Chaperone surA precursor [Brucella pinnipedialis M292/94/1]
gi|256060809|ref|ZP_05450969.1| Chaperone surA precursor [Brucella neotomae 5K33]
gi|256113220|ref|ZP_05454088.1| Chaperone surA precursor [Brucella melitensis bv. 3 str. Ether]
gi|256159410|ref|ZP_05457188.1| Chaperone surA precursor [Brucella ceti M490/95/1]
gi|256254704|ref|ZP_05460240.1| Chaperone surA precursor [Brucella ceti B1/94]
gi|256257204|ref|ZP_05462740.1| Chaperone surA precursor [Brucella abortus bv. 9 str. C68]
gi|256264288|ref|ZP_05466820.1| SurA domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|256369119|ref|YP_003106627.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM
4915]
gi|260545602|ref|ZP_05821343.1| SurA domain-containing protein [Brucella abortus NCTC 8038]
gi|260757664|ref|ZP_05870012.1| SurA domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260761491|ref|ZP_05873834.1| SurA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883474|ref|ZP_05895088.1| SurA domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|261218948|ref|ZP_05933229.1| SurA domain-containing protein [Brucella ceti M13/05/1]
gi|261221884|ref|ZP_05936165.1| SurA domain-containing protein [Brucella ceti B1/94]
gi|261315102|ref|ZP_05954299.1| SurA domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261317343|ref|ZP_05956540.1| SurA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261321553|ref|ZP_05960750.1| SurA domain-containing protein [Brucella ceti M644/93/1]
gi|261324801|ref|ZP_05963998.1| SurA domain-containing protein [Brucella neotomae 5K33]
gi|261752010|ref|ZP_05995719.1| SurA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261754669|ref|ZP_05998378.1| SurA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|265988381|ref|ZP_06100938.1| SurA domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265994631|ref|ZP_06107188.1| SurA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265997847|ref|ZP_06110404.1| SurA domain-containing protein [Brucella ceti M490/95/1]
gi|294852046|ref|ZP_06792719.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026]
gi|297248054|ref|ZP_06931772.1| peptidyl-prolyl cis-trans isomerase SurA [Brucella abortus bv. 5
str. B3196]
gi|306842051|ref|ZP_07474724.1| Chaperone surA precursor [Brucella sp. BO2]
gi|23347483|gb|AAN29613.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella suis 1330]
gi|62195778|gb|AAX74078.1| peptidyl-prolyl cis-trans isomerase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615675|emb|CAJ10662.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella melitensis
biovar Abortus 2308]
gi|189019468|gb|ACD72190.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella abortus
S19]
gi|225640569|gb|ACO00483.1| Chaperone surA precursor [Brucella melitensis ATCC 23457]
gi|237789974|gb|EEP64184.1| Chaperone surA precursor [Brucella abortus str. 2308 A]
gi|255999279|gb|ACU47678.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM
4915]
gi|260097009|gb|EEW80884.1| SurA domain-containing protein [Brucella abortus NCTC 8038]
gi|260667982|gb|EEX54922.1| SurA domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260671923|gb|EEX58744.1| SurA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260873002|gb|EEX80071.1| SurA domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260920468|gb|EEX87121.1| SurA domain-containing protein [Brucella ceti B1/94]
gi|260924037|gb|EEX90605.1| SurA domain-containing protein [Brucella ceti M13/05/1]
gi|261294243|gb|EEX97739.1| SurA domain-containing protein [Brucella ceti M644/93/1]
gi|261296566|gb|EEY00063.1| SurA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261300781|gb|EEY04278.1| SurA domain-containing protein [Brucella neotomae 5K33]
gi|261304128|gb|EEY07625.1| SurA domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261741763|gb|EEY29689.1| SurA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261744422|gb|EEY32348.1| SurA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262552315|gb|EEZ08305.1| SurA domain-containing protein [Brucella ceti M490/95/1]
gi|262765744|gb|EEZ11533.1| SurA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094548|gb|EEZ18357.1| SurA domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|264660578|gb|EEZ30839.1| SurA domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|294820635|gb|EFG37634.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026]
gi|297175223|gb|EFH34570.1| peptidyl-prolyl cis-trans isomerase SurA [Brucella abortus bv. 5
str. B3196]
gi|306287892|gb|EFM59312.1| Chaperone surA precursor [Brucella sp. BO2]
gi|326408703|gb|ADZ65768.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella melitensis
M28]
Length = 318
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|306838742|ref|ZP_07471576.1| Chaperone surA precursor [Brucella sp. NF 2653]
gi|306406144|gb|EFM62389.1| Chaperone surA precursor [Brucella sp. NF 2653]
Length = 317
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 2 FARPLIASLLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 62 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 121
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 122 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 179
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 180 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 237
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 238 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 297
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 298 EELSKKYVQELREKATI 314
>gi|161618653|ref|YP_001592540.1| chaperone surA precursor [Brucella canis ATCC 23365]
gi|260566737|ref|ZP_05837207.1| SurA domain-containing protein [Brucella suis bv. 4 str. 40]
gi|161335464|gb|ABX61769.1| Chaperone surA precursor [Brucella canis ATCC 23365]
gi|260156255|gb|EEW91335.1| SurA domain-containing protein [Brucella suis bv. 4 str. 40]
Length = 318
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVTAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|254688956|ref|ZP_05152210.1| Chaperone surA precursor [Brucella abortus bv. 6 str. 870]
gi|260754445|ref|ZP_05866793.1| SurA domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260674553|gb|EEX61374.1| SurA domain-containing protein [Brucella abortus bv. 6 str. 870]
Length = 318
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSKRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|163842954|ref|YP_001627358.1| chaperone surA precursor [Brucella suis ATCC 23445]
gi|163673677|gb|ABY37788.1| Chaperone surA precursor [Brucella suis ATCC 23445]
Length = 318
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVLPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|254693438|ref|ZP_05155266.1| Chaperone surA precursor [Brucella abortus bv. 3 str. Tulya]
gi|261213691|ref|ZP_05927972.1| SurA domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260915298|gb|EEX82159.1| SurA domain-containing protein [Brucella abortus bv. 3 str. Tulya]
Length = 318
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 147/289 (50%), Gaps = 15/289 (5%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
A S ++ ++G IT+ DI R+A LKLQ+ +G L ++A EL E LK+ E++ GI
Sbjct: 31 AGESEVKVIVSGNAITNSDIKHRMAFLKLQRKSGNLNQLARNELTEEMLKRIEMKSRGIN 90
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V+ + A ++ + +++ G+ HFK+Y+ +Q W +V F +
Sbjct: 91 ISDKEVDDAYAGFASRNKMTLAQLNQVMNQSGVTPEHFKKYIMVQMGWGRLVSARF--RA 148
Query: 157 GNLEMEIPANKQKMKN----ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ E A ++ +KN EY ++ V+F +P +K ++ + KR ++A R R
Sbjct: 149 TGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFVVPASK-RSPALLAKRRQEANALRARF 207
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271
++C+ + A I DV++ ++E L ++ +K + N TT P+ T+KGVE++A
Sbjct: 208 -QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEWSKDVKAAGVNRTTKPHDTEKGVEFLA 266
Query: 272 ICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAE----YVKKLRSNAII 314
+C R + + + S + ++P EK E YV++LR A I
Sbjct: 267 VCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEELSKKYVQELREKATI 315
>gi|148559269|ref|YP_001258666.1| putative peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC
25840]
gi|148370526|gb|ABQ60505.1| putative peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC
25840]
Length = 318
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 156/317 (49%), Gaps = 18/317 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ I V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRSINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYLIRTVL 184
+ HFK+Y+ +Q W +V F + + E A ++ +KN EY ++ V+
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARF--RATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVI 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L
Sbjct: 181 FVVPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPG 238
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHE 301
++ +K + N TT P+ T+KGVE++A+C R + + + S + ++P EK
Sbjct: 239 EWSKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKA 298
Query: 302 AE----YVKKLRSNAII 314
E YV++LR A I
Sbjct: 299 EELSKKYVQELREKATI 315
>gi|110634111|ref|YP_674319.1| putative survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase SurA) [Mesorhizobium sp. BNC1]
gi|110285095|gb|ABG63154.1| putative survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase SurA) [Chelativorans sp. BNC1]
Length = 312
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 143/282 (50%), Gaps = 11/282 (3%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
++ IR +N IT DI +R ALL+L + G + ++A +E+I +TL++QE+ +SG+
Sbjct: 33 ATEIRYVVNDRPITSFDIERRAALLRLMQRKGNVNELAAEEMIDQTLRQQEMARSGVNIT 92
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ + A + ++ L + G+G HFK+++ Q W V+++ + G
Sbjct: 93 QAMVDESYRNFAGSNNMTVAQLDQILGQAGVGKEHFKEFIRTQIGWGRVMQSRS--RSGT 150
Query: 159 L--EMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ E ++ +Q + T EY+++ V+F +P Q + KR ++A+ R R
Sbjct: 151 ILSEQDVVQKMLQQGGQKPTATEYMLQQVIFVVP--AAQRGQLLAKRKREAQAMRDRF-N 207
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV-TQKGVEYIAIC 273
C +FA + DV++ +L +L P++++ + ++ P T++GVE+I IC
Sbjct: 208 GCANTVQFAKGLIDVTVRDMGRVLAPELPPEWKDQISNTRPGNATPIRETERGVEFIGIC 267
Query: 274 DKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R++ + +A + S Q E EY+ +LR A I
Sbjct: 268 SAREVSDDHVARMVFQSQQAGDGSFEDAAKEYMAELRKKARI 309
>gi|239831518|ref|ZP_04679847.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301]
gi|239823785|gb|EEQ95353.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301]
Length = 336
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 11/284 (3%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S ++ ++G IT+ DI R+A LKLQ+ G L ++A QEL E LK+ E++ GI
Sbjct: 52 SEVKVIVSGNAITNSDIQHRVAFLKLQRKGGNLAQVAKQELTDEMLKRIEMKSRGIDISD 111
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V+ + A +S + +++ G+ +HFK+Y+ +Q W +V F
Sbjct: 112 RQVDEAYAGFATRNKMSLAQLNQLMNQSGVTPDHFKKYIMVQMGWGRLVSARFRATGMVS 171
Query: 160 EMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E E K K EY ++ V+F +P +K ++ + KR ++A R R ++C+
Sbjct: 172 EQEAVQRMLKDGGKKPVATEYRLQQVIFVVPASK-RSPALLAKRKQEANALRSRF-QNCD 229
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
+ A I DV++ ++E L ++ +K S TT P T+KGVE++A+C R
Sbjct: 230 ATRQQAKGILDVTVRDLGRIIEQQLPNEWSKAIKSTSVGGTTPPQETEKGVEFLAVCSTR 289
Query: 277 DLGGEIALKAYLSAQ--NTPT----KIEKHEAEYVKKLRSNAII 314
+ + + S + ++P K E+ +Y+ +LR A I
Sbjct: 290 QVSDDRVAQLVFSMEGADSPAGQEKKAEQLSEKYLGELREKAKI 333
>gi|319405490|emb|CBI79109.1| Peptidyl-prolyl cis-trans isomerase [Bartonella sp. AR 15-3]
Length = 318
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 147/313 (46%), Gaps = 15/313 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+ L F+ + I + +++A +S + T+NG IT DI +RIA LKLQ+ G L
Sbjct: 9 LALFCITFLSVSISISIFFTSQAFAQTSVV-VTVNGSAITSYDIQRRIAFLKLQQRQGNL 67
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
A ELI ETLK EI++ I + + F A ++ E S L + +
Sbjct: 68 AVQAKNELIDETLKNNEIKRRNIEVSKDELESAFENFATQNNMTVEQLSQMLTQTDVTVE 127
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSIP 188
HFK Y+ Q W +V + + G L E A + +KN V+ EY ++ ++F IP
Sbjct: 128 HFKAYILGQMGWGRLVNARYQAEGGIL-TEQEAVHRILKNGGVKPSTNEYTLQQIIFVIP 186
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+++ ++KRIK+A + R + CN + I D++I LE L ++
Sbjct: 187 EHR--RSAILEKRIKEANQFRANF-RGCNSAKHQVKGILDITIRHLGKFLEPQLPRNWEK 243
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKHEA 302
+L TN TQ+G+E IA+C + + + + S Q + P +E
Sbjct: 244 AILATPAGKMTNLQETQRGIEAIAVCQIKRVSDDRVARLIFSIQDHQKKDIPQLLEAISE 303
Query: 303 EYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 304 KYLKELRQTARIQ 316
>gi|319408317|emb|CBI81970.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 308
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 13/282 (4%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+NG IT+ DI +RIA LKLQ+ G+L A ELI E LK EI++ I N +N
Sbjct: 25 TVNGNPITNYDIQRRIAFLKLQQKQGDLSAQARNELIDEMLKNIEIQRLNIDVSDNEINS 84
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
F A ++ + S L++ + + HFK Y++ Q W +V + + G L E
Sbjct: 85 AFANFAEQNNMTVDQLSEMLNQTEVTEEHFKAYISGQMGWGRLVNARYQSEDGYLS-EQE 143
Query: 165 ANKQKMKNITVR----EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
A + +KN ++ EY ++ ++F IP ++ + KR ++ R + C+ +
Sbjct: 144 AAHRILKNGGIKPSTNEYTLQQIIFVIPAHRRAE--LLTKRTQEINNFRAHF-RGCDNTK 200
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLG 279
K I DV++ LE L ++ ++ + T P+ T G+E +A+C + +
Sbjct: 201 KQTRGILDVTVRNLGKFLEPQLPTDWEQAIRATPAGKMTQPHETPYGIEALAVCQIKKVS 260
Query: 280 GEIALKAYLSAQN----TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + S Q+ TP K+E +Y+K+LR A I +
Sbjct: 261 DDRVAQLMFSIQDSQKRTPQKLEALSEKYLKELRQRAHIQNH 302
>gi|13476523|ref|NP_108093.1| hypothetical protein mll7863 [Mesorhizobium loti MAFF303099]
gi|14027284|dbj|BAB54238.1| mll7863 [Mesorhizobium loti MAFF303099]
Length = 310
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 14/307 (4%)
Query: 15 LLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + F L++ V + A +S I+ +N IT GDI+ R A LKLQ+ G+
Sbjct: 8 LFSAGFALLVAATSVSMTVMTPPAFASEIKYVVNDIPITTGDIAHRAAFLKLQRKKGD-- 65
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A QE+I +TL+ E + GI V + + A N + ++K G+G +H
Sbjct: 66 --AAQEMIDQTLRLAEARRLGIRISDAQVEAAYQRFATNNKMQLGQLDGVMEKSGVGKDH 123
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----KNITVREYLIRTVLFSIPD 189
FK+++ Q W + + G E A ++ + + EY+++ V+F +P
Sbjct: 124 FKEFIRAQMAWNQALSARYRSGEGGSVTEQDAVRRMLDKGGAKPSATEYMLQQVIFVVPA 183
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + + KR ++A+ R R CN +FA + DV++ +L L P +
Sbjct: 184 S--ERSATLAKRKREADAMRARF-NGCNTTREFAKGLIDVTVRDLGRVLAPQLPPDWAEQ 240
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKK 307
+K ++ T T++GVE+I IC R++ + + ++ + K + +YV +
Sbjct: 241 IKATKVGGATVTRETERGVEFIGICSSREVSDDKTAQMVFQSEGSNDKAADDLSKKYVDE 300
Query: 308 LRSNAII 314
L++ A I
Sbjct: 301 LKAKARI 307
>gi|319404053|emb|CBI77641.1| Peptidyl-prolyl cis-trans isomerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 319
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 25/315 (7%)
Query: 21 VLIIFCIVP----------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
L +FCI + +++A +S + T+NG IT+ DI +RIA LKLQ+ G
Sbjct: 8 ALALFCITSLSVSSLSVSTFFTSQAFAQTSVV-VTVNGSAITNYDIQRRIAFLKLQQKQG 66
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A +LI E LK EI++ I ++ V F A ++ + + L + +
Sbjct: 67 NLATQAKNDLIDEVLKNNEIKRRNIEVSTDEVENAFENFAAQNNMTVDQLNQMLTQTDVT 126
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFS 186
HFK Y+ Q W +V + + G + E A+++ +KN V+ EY ++ ++F
Sbjct: 127 VEHFKAYILGQMGWARLVNARYQAE-GGVITEQEASQRILKNGGVKPSTNEYTLQQIIFV 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KR K+A + R + CN + A I D++I LE L +
Sbjct: 186 IPEHR--RSAILEKRKKEANKFRANF-QGCNSAKNQAKGILDITIRHLGKFLEPQLPQNW 242
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKH 300
+ +L TN TQ G+E +A+C + + + + S Q N P +E
Sbjct: 243 EKAILATPAGKMTNFQETQNGIEAVAVCQIKRVSDDRVARLIFSIQDHQKKNIPQLLEAL 302
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 303 SEKYLKELRQTARIQ 317
>gi|260466949|ref|ZP_05813131.1| SurA domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029246|gb|EEW30540.1| SurA domain protein [Mesorhizobium opportunistum WSM2075]
Length = 307
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 145/307 (47%), Gaps = 14/307 (4%)
Query: 15 LLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + F L++ V + A +S I+ +N IT GDI+ R A LKLQ+ G+
Sbjct: 5 LFSAGFALLVAATSVSMTVMTPPAFASEIKYVVNNVPITTGDIAHRAAFLKLQRKKGD-- 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A QE+I +TL+ E + GI V + + A + + + ++K G+G +H
Sbjct: 63 --AAQEMIDQTLRLAEARRLGIRISDAQVEAAYQRFATSNKMQLSQLNGVMEKSGVGKDH 120
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----KNITVREYLIRTVLFSIPD 189
FK+++ Q W + + G E A ++ + + EY+++ V+F +P
Sbjct: 121 FKEFIRAQMAWNQALGARYRSGEGGSVTEQDAVRRMLDKGGAKPSATEYMLQQVIFVVPA 180
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + + KR ++A+ R R C +FA + DV++ +L L P +
Sbjct: 181 S--ERSATLAKRKREADAMRARF-NGCTTTREFAKGLIDVTVRDLGRVLAPQLPPDWAEQ 237
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKK 307
+K ++ T T++GVE+I IC R++ + + ++ + K ++ +YV++
Sbjct: 238 IKATKVGGATVTRETERGVEFIGICSSREVSDDKTAQMVFQSEGSSDKNADELSKKYVEE 297
Query: 308 LRSNAII 314
L++ A I
Sbjct: 298 LKAKAHI 304
>gi|319407065|emb|CBI80702.1| Peptidyl-prolyl cis-trans isomerase [Bartonella sp. 1-1C]
Length = 319
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 25/315 (7%)
Query: 21 VLIIFCIVP----------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
L +FCI + +++A +S + T+NG IT+ DI +RIA LKLQ+ G
Sbjct: 8 ALALFCITSLSVSSLSVSTFFTSQAFAQTSVV-VTVNGNAITNYDIQRRIAFLKLQQKQG 66
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A +LI E LK EI++ I + V F A ++ + + L + +
Sbjct: 67 NLATQAKNDLIDEVLKNNEIKRRNIEVSKDEVENAFENFAAQNNMTVDQLNQMLTQTDVT 126
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFS 186
HFK Y+ Q W +V + + G + E A+++ +KN V+ EY ++ ++F
Sbjct: 127 VEHFKAYIWGQMGWGRLVNARYQAE-GGVITEQEASQRILKNGGVKPSTNEYTLQQIIFV 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KR K+A + R + CN + A I D++I LE L +
Sbjct: 186 IPEHRW--SAILEKRKKEANKFRANF-QGCNSAKNQAKGILDITIRHLGKFLEPQLPQNW 242
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKH 300
+ +L TN TQ G+E +A+C + + + + S Q + P +E
Sbjct: 243 EKAILATPAGKMTNFQETQNGIEAVAVCQIKRVSDDRVARLIFSIQDHQKKDIPQLLEAL 302
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 303 SEKYLKELRQTARIQ 317
>gi|209885477|ref|YP_002289334.1| SurA N- domain family [Oligotropha carboxidovorans OM5]
gi|209873673|gb|ACI93469.1| SurA N- domain family [Oligotropha carboxidovorans OM5]
Length = 330
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 20/316 (6%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
LS F+ + F I V S ++ I +NGE IT DI +R L+ L
Sbjct: 24 LSVFVSRIALAFAAFIILAVTAPSVQAQG----IVVMVNGEPITTYDIEQRTKLITLTTR 79
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ A+QELI + LK +E +K G+ ++ V+ F A+ +S++ + L QG
Sbjct: 80 KAPTRQQALQELIDDRLKIKEAKKFGVDLSASDVDSAFAGMAQRMRISSDQLAQVLQAQG 139
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDF--MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLF 185
+ + K L + W +V+ F L G +++ + T EY +R ++
Sbjct: 140 VRPDTMKFRLKADTAWGALVRGRFKQSLLVGERDVQAAVGENPSGERTESYEYHMRPIVL 199
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+P + G V++R K+AE R R+ + C + + + SI +DL P
Sbjct: 200 FVPRG---SSGAVEQRKKEAEALRERI-QSCEEATRVFKSLRQASIRDTIVKTSADLPPN 255
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKH 300
+ LL K+ T P VT++G+E +A+C+++ D + A + L AQ K E
Sbjct: 256 LRELLDKTPVGRMTAPEVTRQGIEMVALCNRQVTTADTPAKRAARDKLFAQ----KYEAK 311
Query: 301 EAEYVKKLRSNAIIHY 316
Y++ LR A+I Y
Sbjct: 312 SKSYLEDLRKRAMIEY 327
>gi|319898728|ref|YP_004158821.1| Peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
gi|319402692|emb|CBI76238.1| Peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
Length = 319
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)
Query: 21 VLIIFCIVP----------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
VL +FCI + + +A +S + T+NG IT DI +RIA LKLQ+ G
Sbjct: 8 VLALFCITSLSVSSLSVSTFFTSQVFAQTSVV-VTVNGNPITSYDIQRRIAFLKLQQKQG 66
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A ELI E LK EI++ I + V F A ++ + + L + +
Sbjct: 67 NLAAQAKNELIDEALKNNEIKRRNIEVSKDEVESAFKNFALQNNMTVDQLNQMLAQTDVT 126
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFS 186
HFK Y+ Q W +V + + G L + A++ +KN V+ EY ++ ++F
Sbjct: 127 VEHFKTYILGQMGWGRLVNARYQAEGGVLTEQETAHR-ILKNGGVKPSTNEYTLQRIIFV 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KR K+A + R C+ + A I DV+I LE L +
Sbjct: 186 IPEHR--RSAILEKRKKEANKFRANF-HGCHNAQNQAKSILDVTIRHLGKFLEPQLPQNW 242
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKH 300
+ +L TN TQ G+E +AIC + + + + S Q + P +E
Sbjct: 243 EKAILATPAGKMTNFQETQYGIEALAICQIKRVSDDRVARLIFSIQDHQKKDIPQLLEAL 302
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 303 SEKYLKELRQTAHIQ 317
>gi|319784426|ref|YP_004143902.1| SurA domain [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170314|gb|ADV13852.1| SurA domain [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 309
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 16/309 (5%)
Query: 15 LLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + F L++ V I A +S I+ +N +T GDI+ R A LKLQ+ G+
Sbjct: 5 LFSAGFALLVAATSVSITVMAPPAFASEIKYVVNDIPVTTGDIAHRAAFLKLQRKKGD-- 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A QE+I +TL+ E ++ GI V+ + + A + + ++K G+ +H
Sbjct: 63 --AGQEMIDQTLRMAEAKRLGIRISDAQVDAAYQRFASSNKMQLSQLDGVMEKSGVTKSH 120
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-----KNITVREYLIRTVLFSIP 188
FK+++ Q W + + G + +KM + EY+++ V+F +P
Sbjct: 121 FKEFIRAQMAWNQALSARYRSGDGTGAVSEQDLVRKMLEKGGAKPSATEYMLQQVIFVVP 180
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ + KR ++A+ R R CN +FA + DV++ +L L P +
Sbjct: 181 --AAERSATLGKRKREADAMRARF-NGCNTTREFAKGLIDVTVRDLGRVLAPQLPPDWAE 237
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYV 305
+K ++ T T++GVE+I IC R++ + + A+ + + +YV
Sbjct: 238 QIKATKVGGATVTRETERGVEFIGICSSREVSDDKVAQMAFQAEGSGGDKDADALSKKYV 297
Query: 306 KKLRSNAII 314
+L++ A I
Sbjct: 298 DELKAKARI 306
>gi|49474098|ref|YP_032140.1| hypothetical protein BQ04600 [Bartonella quintana str. Toulouse]
gi|49239602|emb|CAF25959.1| hypothetical protein BQ04600 [Bartonella quintana str. Toulouse]
Length = 324
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 24/313 (7%)
Query: 21 VLIIFCIVPIVSYKSWAMS----------SRIRTTINGEVITDGDISKRIALLKLQKING 70
+L +FCI P+ S + +S + I T+NG IT+ DI +R A LKLQ+ G
Sbjct: 14 ILALFCIAPL-SVSNLLVSGFLISPVFAQTVIVVTVNGNPITNYDIQRRTAFLKLQQKQG 72
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A ELI E +K EI++ I N V F A ++ + + L + I
Sbjct: 73 NLAAQAKNELINEIVKNTEIKRRNIEVSDNEVESAFENFAMQNNMTVDQLNQILMQNDIT 132
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFS 186
HFK Y+ Q W +V + + G + E A ++ +KN V+ EY ++ ++F
Sbjct: 133 VQHFKDYIRGQIGWGRLVNARYQAEIGMVS-EQEAVRRILKNGGVKPSTNEYTLQQIIFV 191
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ +++R ++A+ R + C +K A I DV+I LE L ++
Sbjct: 192 IPEHR--RSEILERRQREAKSFRAHF-QGCANAQKQARGILDVTIRHLGKFLEPQLPREW 248
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHE 301
++ + T T G+E +A+C + + + + S Q+ +P K+E
Sbjct: 249 GQAVRATPVGKMTQLRETTDGIEALAVCKIKRVSDDYVARLIFSLQDNKEKSPQKLEILS 308
Query: 302 AEYVKKLRSNAII 314
+Y+K+LR A I
Sbjct: 309 EKYLKELRQAAHI 321
>gi|49475336|ref|YP_033377.1| hypothetical protein BH05420 [Bartonella henselae str. Houston-1]
gi|49238142|emb|CAF27350.1| hypothetical protein BH05420 [Bartonella henselae str. Houston-1]
Length = 322
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 20/310 (6%)
Query: 21 VLIIFCIVP-------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L +FCIVP + S + I T+NG+ IT+ DI +R A L+LQ+ G L
Sbjct: 14 ILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRAAFLRLQQKQGNLS 73
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A ELI E LK EI++ I +N V F A ++ + + L I H
Sbjct: 74 EQAKNELINEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQLNQILIDNDITVQH 133
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSIPD 189
FK Y+ Q W +V + + G + E A ++ +KN V+ EY ++ ++F IP
Sbjct: 134 FKDYIRGQLGWGRLVNARYQAETGMIS-EQEAVRRILKNGGVKPSTNEYTLQRIIFVIPA 192
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
++ ++R ++A R + C K A I DV++ LE L +++
Sbjct: 193 HR--RSEIFERRQREANNFRAHF-QGCANTSKQAKGILDVTVRNLGKFLEPQLPREWEQA 249
Query: 250 LK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEAEY 304
++ T T G+E IA+C + + + + S Q+ +P ++E +Y
Sbjct: 250 IRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQELEILSEKY 309
Query: 305 VKKLRSNAII 314
+K+LR A I
Sbjct: 310 LKELRQVARI 319
>gi|328544014|ref|YP_004304123.1| SurA N-terminal domain family protein [polymorphum gilvum
SL003B-26A1]
gi|326413758|gb|ADZ70821.1| SurA N-terminal domain family protein [Polymorphum gilvum
SL003B-26A1]
Length = 307
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 142/282 (50%), Gaps = 11/282 (3%)
Query: 42 IRTTINGEVITDGDISKRIALLKL-QKINGE-LEKIAVQELIVETLKKQEIEKSGITFDS 99
I+ +N + IT DI++R L+ L Q+ +GE ++A +EL+ + LK +E ++ GI+
Sbjct: 29 IKVVVNEQAITSYDIAQRARLITLTQRKSGETARRMAQEELVDDVLKLKEAQRIGISVSK 88
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V+ F A+ +S + ++ L + G+ + + L + W V F +
Sbjct: 89 GDVDDAFASIAQRVKMSPANLAAALRQSGVDPDTLRARLRAEVAWSRAVGQRFRAQVKVS 148
Query: 160 EMEIPANKQKM----KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ A QK KN+++ E+ +R V+F +P + G +R ++A++ R
Sbjct: 149 DSDVIAALQKSEDKNKNLSI-EFELRQVIFVVPQKA--SSGLKAQRKREADQFRKEFT-S 204
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
C A +++V + + LE++L P ++ + K++ T P T +G+E IA+C
Sbjct: 205 CETGAAQARTLNEVVVRAIGHRLETELPPALRDTIVKTEVGRLTPPEQTSRGLEMIAVCG 264
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
KR++ +IA + + + + E+ Y+++LR A I Y
Sbjct: 265 KREIQSDIAARTAIEDELRQKEGEQMSRRYLQELRRRATIEY 306
>gi|114704782|ref|ZP_01437690.1| survival protein sura precursor (peptidyl-prolyl cis-trans
isomerase sura) [Fulvimarina pelagi HTCC2506]
gi|114539567|gb|EAU42687.1| survival protein sura precursor (peptidyl-prolyl cis-trans
isomerase sura) [Fulvimarina pelagi HTCC2506]
Length = 308
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 9/274 (3%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
NG +T I +R A LKL+++ G + A ELI E LK+QEI++ G+ VN +
Sbjct: 35 NGMPVTTYQIRQRAAFLKLRRVGGNTTQKATDELIDEALKRQEIQRQGVNIPDEEVNAAY 94
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ A+ LS + L G FK Y+ +Q W + E +
Sbjct: 95 LNFAKGNNLSEAQLAEVLGSAGFSPQAFKDYIRVQMGWGQAASRRIQREERLTEQDAVQR 154
Query: 167 --KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
Q + + EY ++ V+F IP+ Q + R ++A+ R R + C+ FA
Sbjct: 155 MLAQGGEKPSTTEYTLQQVIFVIPNG--QRGAMLANRKREAQAMRQRF-QSCDSTLAFAQ 211
Query: 225 KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ DV++ + + +L + +++++ S T T +GVE+I +C+ R + + A
Sbjct: 212 GLRDVTVRDLGRVAQPELPSLWKEDVMQTSPGRATPTKETDRGVEFIGVCNARQISDDRA 271
Query: 284 LKAYLSAQNTPT---KIEKHEAEYVKKLRSNAII 314
+ A++ + +A +KKLR A I
Sbjct: 272 AQMVFQARDMESLNGDGSGADAALLKKLRDEAQI 305
>gi|163868025|ref|YP_001609229.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
gi|161017676|emb|CAK01234.1| Peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
Length = 322
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 144/313 (46%), Gaps = 22/313 (7%)
Query: 21 VLIIFCIVPI-VS--------YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+L +FCI + VS S + I T+NG IT+ DI +R+A L+LQ+ G
Sbjct: 14 LLALFCIASLGVSSLLINEFLISSAFAQTAIVVTVNGNPITNYDIQRRVAFLRLQQKQGS 73
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L A +ELI E LK EI++ I ++ VN F A ++ + + L + I
Sbjct: 74 LAAQAKKELIDEELKNIEIKRRNIEVSNDEVNRAFENFATQNNMTVDQLNQILIQNDITV 133
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSI 187
HFK Y+ Q W +V + + G + E A ++ +KN V+ EY ++ ++F I
Sbjct: 134 QHFKDYIRGQIGWGRLVSARYQAQTGMVS-EQEAVRRILKNGGVKPSTNEYTLQRIVFVI 192
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246
P ++ +++R ++A R + C A I DV+I LE L +
Sbjct: 193 PAHR--RSEILERRQREASNFRAHF-RGCANAHNQARGILDVTIRPLGKFLEPQLPSAWE 249
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT----PTKIEKHEA 302
Q +L T T G+E IA+C + + + + S Q+ P K+E+
Sbjct: 250 QAILATPAGKMTKLQETSDGIEAIAVCKIKRISDDYVARLIFSLQDNKKRDPKKLEELSE 309
Query: 303 EYVKKLRSNAIIH 315
+Y+++LR A I
Sbjct: 310 KYLEELRRVARIQ 322
>gi|86749597|ref|YP_486093.1| hypothetical protein RPB_2477 [Rhodopseudomonas palustris HaA2]
gi|86572625|gb|ABD07182.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 309
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 144/312 (46%), Gaps = 15/312 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSW-----AMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+TT F IF + SW A + + +NGE IT+ DI +R L KL +
Sbjct: 1 MTTKFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQSR 60
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++ + ELI E +K +E +K G+ + ++ F + +S + L QGI
Sbjct: 61 TRQQV-LDELIDEKVKIREGKKFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIR 119
Query: 131 DNHFKQYLAIQSIWPDVVKNDF----MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLF 185
K + + +W +V+ F ++ +++ ++ A K+ T EY +R V+
Sbjct: 120 PGTLKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKGGDDKSTTESFEYQMRPVVL 179
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ ++ G V+ R K+AE R R+ + C ++ + + +I +DL P
Sbjct: 180 IV--SRGSGAGAVEARRKEAEALRSRV-QSCADADRIFKALPNAAIRATVVKTSADLPPA 236
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ +L K+ T P T++GVE +A+C ++ + +K + + K + +Y
Sbjct: 237 LREILDKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDY 296
Query: 305 VKKLRSNAIIHY 316
+++ R+ A+I Y
Sbjct: 297 LRESRNAAMIEY 308
>gi|85716332|ref|ZP_01047305.1| hypothetical protein NB311A_19130 [Nitrobacter sp. Nb-311A]
gi|85696848|gb|EAQ34733.1| hypothetical protein NB311A_19130 [Nitrobacter sp. Nb-311A]
Length = 319
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 138/307 (44%), Gaps = 8/307 (2%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
L + L +F + VS+ S + + +NGE IT DI +R L+K+ +
Sbjct: 6 LFRPFSRLAVFAFLSFVSFNSPLSAQSVAVMVNGEPITTFDIEQRSRLIKISTHKSASRQ 65
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ELI E +K +E +K G+ S ++ + G+S E + L QG+ +
Sbjct: 66 EVIDELIGEKVKIKEAKKFGVNPTSADIDRAYANMGARMGMSPEQLTKSLASQGVRPDTI 125
Query: 135 KQYLAIQSIWPDVVKNDF----MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K L +W +V+ F ++ ++ + + + I EY +R V+ +P
Sbjct: 126 KARLRADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVLIVPRG 185
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ ++ R +A R R+ + C + + + ++ +DL P ++LL
Sbjct: 186 AAAS--VMEARRNEANSLRERV-QSCADAIRIVKAMRNATLRDRVTKTSADLPPPLRDLL 242
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K+ + T P +T++G+E +A+C+K+ + K + + K EK Y++ +R
Sbjct: 243 DKTPVGHLTPPEITRQGIEMVAVCEKKVTSVDTPKKREIREKMFADKYEKRSKSYLENIR 302
Query: 310 SNAIIHY 316
+A+I Y
Sbjct: 303 RSAMIEY 309
>gi|121602042|ref|YP_988820.1| SurA domain-containing protein [Bartonella bacilliformis KC583]
gi|120614219|gb|ABM44820.1| SurA domain protein [Bartonella bacilliformis KC583]
Length = 325
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 12/312 (3%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
F+ L T F+ + + ++S +A +++ T+NG IT+ DI +RIA LKLQ+
Sbjct: 14 FLTLFFTAFLGVSSLFINVLSISPVFAQQTKVALTVNGNAITNYDIQRRIAFLKLQQKKE 73
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A ELI E LKK EI++ I + V+ F A ++ S L + +
Sbjct: 74 NLSVQAKNELIDEMLKKIEIKQRNIDVSDSEVDAAFENFAVQNHMTINQLSEMLTQTNVT 133
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNL-EMEIPAN--KQKMKNITVREYLIRTVLFSI 187
HFK Y+ Q W +V + + G L E E+ K + + EY ++ ++F I
Sbjct: 134 VKHFKDYIRGQIGWGRLVNARYQAEGGLLTEQEVAHKILKNGGQKPSTDEYTLQRIIFVI 193
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
P ++ +QKR ++A R CN I DV+I + +LE L ++
Sbjct: 194 PAHR--RSEILQKRTQEANSFREHF-NGCNNTRAQVKGILDVTIRSSVKILEPQLPQDWK 250
Query: 248 N-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT----PTKIEKHEA 302
+L+ T T G+E A+C + + + + S Q++ P ++E
Sbjct: 251 KFILETPAGKMTQVQETPNGIEAFAVCQIKRVSDDRVAQLLFSIQHSQEDIPQELETLSE 310
Query: 303 EYVKKLRSNAII 314
+Y+K+L+ A I
Sbjct: 311 KYLKELQQAAHI 322
>gi|254473455|ref|ZP_05086852.1| SurA N-terminal domain family protein [Pseudovibrio sp. JE062]
gi|211957571|gb|EEA92774.1| SurA N-terminal domain family protein [Pseudovibrio sp. JE062]
Length = 313
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 16/311 (5%)
Query: 18 TYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKRIALLKL--QKING 70
T F +F I++ S +S+I +NG IT ++ +R L+ L + +
Sbjct: 4 TRFCASLFVAASILAPVGPMLTSAEAASKIVAVVNGRPITSYELQQRSKLISLTTRAPSS 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ A ELI E LK E ++ G++ + V+ F A+ +S F L + G+
Sbjct: 64 IAKRKAKDELIDEALKLAEAKRVGVSISDSKVDDAFATIAQRVKMSPSQFKQALSQSGVN 123
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-----ITVREYLIRTVLF 185
K L + W +VV F E ++ A Q +N T EY ++ ++F
Sbjct: 124 PRTLKSRLRAEISWSEVVMQRFRATVRINESDVIAALQGRENKDDSGATSVEYDLQRIIF 183
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
IP N ++ F KR+ + ++ R R C + + AS +++V + LE+DL P
Sbjct: 184 VIPKN--SSKTFKNKRVSEMKKLRARF-TSCEEGTRLASGLNEVVVRPIGKRLETDLPPA 240
Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F L + S T P G E IA+C K + + ++ + + K ++ Y
Sbjct: 241 FVKKLNEISIGRVTAPTPVDSGFEMIALCGKETINSDATARSTIEGELRNKKGQQLSRRY 300
Query: 305 VKKLRSNAIIH 315
++ LRSNA+I
Sbjct: 301 LRDLRSNAVIE 311
>gi|240850229|ref|YP_002971622.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup]
gi|240267352|gb|ACS50940.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup]
Length = 324
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 147/313 (46%), Gaps = 18/313 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+I L+ +LI ++P V +A +S I T+NG IT+ DI +R+A L+LQ+ G
Sbjct: 19 YITSLSVSSLLINGFLIPTV----FAQTS-IVVTVNGNPITNYDIQRRLAFLRLQQKQGN 73
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L A +ELI E LK EI++ I ++ V+ F A ++ + + L + I
Sbjct: 74 LVAQAKKELIDEKLKNIEIKRRNIEVSNDEVDRAFENFATQNNMTIDQLNQILIQTEITV 133
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSI 187
HFK Y+ Q W +V + + G + E A ++ +KN V+ EY ++ ++F I
Sbjct: 134 QHFKDYIRGQIGWGRLVSARYQAETGMIS-EQEAVRRILKNGGVKPSTNEYTLQRIVFVI 192
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246
P ++ ++R ++A R + C A I DV+I LE L +
Sbjct: 193 PAHR--RSEIFERRQREASNFRAHF-RGCANAHNQARGILDVTIRHLGKFLEPQLPNAWE 249
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEA 302
Q +L T T G+E IA+C + + + + S Q+ +P K+E+
Sbjct: 250 QAILATPAGKMTKLQETSDGIEAIAVCKIKRVSDDYVARLIFSLQDSKKRSPQKLEELSD 309
Query: 303 EYVKKLRSNAIIH 315
+Y+ +LR A I
Sbjct: 310 KYLGELRRVARIQ 322
>gi|154246774|ref|YP_001417732.1| putative peptidyl-prolyl cis-trans isomerase SurA [Xanthobacter
autotrophicus Py2]
gi|154160859|gb|ABS68075.1| putative peptidyl-prolyl cis-trans isomerase SurA [Xanthobacter
autotrophicus Py2]
Length = 303
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 7/282 (2%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
A + +I +NG+ IT D+S+R + ++ + + A+++LI E +K Q+ + +
Sbjct: 24 AQAQQIIVMVNGDPITTFDVSQRQLMHQMIERKSVSAQQALEDLIDERIKIQQAIRLKME 83
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLK 155
+ V+ + A +G + E + +QG+ D FKQ L +W V+ +
Sbjct: 84 VEQKDVDRLYASVAERSGRTPEQLTEGFKQQGLNDRTFKQKLFADYVWGQYVRARSGTVN 143
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ K+ + EY + ++F +P +N G R+ +A R R D
Sbjct: 144 VRDADVVAALQKRGETQMIATEYTLMPIVFVVP----RNAGNYAARLAEANALRGRF-TD 198
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
C+ + + +V + L S++ PQ + +L K++ T P V Q GVE AIC
Sbjct: 199 CDAGAQTVKSLKEVVVRPKVTRLSSEMPPQLRQILDKTEIGRLTPPEVAQSGVETFAICG 258
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
KR++ GE A K + + + + +++ +LR ++I Y
Sbjct: 259 KREVRGESAQKKEIKDELSNAQFAAESKKFMAELRKQSLIEY 300
>gi|90423813|ref|YP_532183.1| hypothetical protein RPC_2310 [Rhodopseudomonas palustris BisB18]
gi|90105827|gb|ABD87864.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 320
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 12/304 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L ++ C+ P + +S A+ +NGE IT+ DI +R L+ L +
Sbjct: 25 LCCAVAMLAICLGPDLHAQSVAV------MVNGEPITNYDIEQRSKLMALSTHKSPSRQQ 78
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ ELI E +K +E +K GI ++ F +SAE + L+ QGI K
Sbjct: 79 VIDELINEKVKIREGKKFGIDPSVADIDGSFAGMGSRMRMSAEQLTKSLEGQGIRPETLK 138
Query: 136 QYLAIQSIWPDVVKNDF--MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
Q + + +W +V+ F L G E+ + EY +R ++ +P N
Sbjct: 139 QRMRAEMVWTSLVRGRFKDSLLVGEKEVRAALGGDDKSSGESFEYQMRPIVLIVPRNAAP 198
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ + R+K+AE R R+ + C + + + + +I +D+ + +L K+
Sbjct: 199 SA--RELRMKEAEALRSRV-QSCAEADDLFKSMQNAAIRDTVTKTSADIPGVLREVLDKT 255
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T P VT++GVE +A+C ++ + K + + K E Y++ +R A
Sbjct: 256 PIGHLTAPEVTKQGVEMVALCSRKPTTADTPKKREIRDKMFADKFEAKSKSYLRDVRKAA 315
Query: 313 IIHY 316
+I Y
Sbjct: 316 MIEY 319
>gi|75675872|ref|YP_318293.1| hypothetical protein Nwi_1680 [Nitrobacter winogradskyi Nb-255]
gi|74420742|gb|ABA04941.1| conserved unknown protein [Nitrobacter winogradskyi Nb-255]
Length = 314
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 8/301 (2%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+L +F + VS S + I +NGE IT DI +R L+K+ + + EL
Sbjct: 12 LLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQEVIDEL 71
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E +K +E +K G+ S ++ + G+S E + L QGI + K L
Sbjct: 72 IDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTIKSRLKA 131
Query: 141 QSIWPDVVKNDF----MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+W +V+ F ++ ++ + + + I EY +R V+ +P +
Sbjct: 132 DLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVLIVP--RGATAS 189
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255
V+ R +A R R+ + C ++ + + + ++ + +DL P ++LL K+
Sbjct: 190 MVEARRNEANALRERV-QSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRDLLDKTAVG 248
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ T P +T++GVE +A+C K+ + K + + K EK Y++++R +A+I
Sbjct: 249 HLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIRKSAMIE 308
Query: 316 Y 316
Y
Sbjct: 309 Y 309
>gi|115525297|ref|YP_782208.1| hypothetical protein RPE_3295 [Rhodopseudomonas palustris BisA53]
gi|115519244|gb|ABJ07228.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 305
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 6/274 (2%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NGE IT DI +R L +L + ++ELI E +K +E +K GI ++
Sbjct: 34 VNGEPITSYDIDQRSKLTQLSTRKTPPRQEVIEELINEKVKIKEGKKFGIDPSGADIDSS 93
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--MLKYGNLEMEI 163
F +S E + L GI + K + + +W +V+ F L G +++
Sbjct: 94 FANMGSRMRMSPEQLTQTLANSGIRPDTLKHRMRAEMVWTSLVRGRFKDSLLVGEKDIQA 153
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
EY +R V+ +P N + R+K+AE R R+ + C +
Sbjct: 154 ALGDSDKPAGESFEYQMRPVVLIVPRN--AAPASREARMKEAEALRARV-QTCEEANALF 210
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ + +I +DL P + LL K+ + T P T++GVE +A+C ++ +
Sbjct: 211 KSMPNAAIRATVSKTSADLPPSLRELLDKTPIGHLTAPEATKQGVEMVALCSRKPTTADT 270
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K + + K E Y++ +R A++ Y
Sbjct: 271 PKKREIREKMFAEKFEAKSKAYLRDVRKAAMVEY 304
>gi|304392008|ref|ZP_07373950.1| survival protein SurA [Ahrensia sp. R2A130]
gi|303296237|gb|EFL90595.1| survival protein SurA [Ahrensia sp. R2A130]
Length = 343
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 20/290 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+RI +N IT DI++R ++L+++ G IA ELI E +K +E +
Sbjct: 59 GTRIAVLVNETPITSTDIARRAKFVRLRRMKGNATTIATNELIDEAIKMKEARRINAVAS 118
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-- 156
V+ + A+N L+ L + G FK Y+ W V + +
Sbjct: 119 DAEVSSAYAGFAKNNKLTQPQLGQVLSRSGTTVRGFKDYIRASLSWQRAVGSRMRAEASG 178
Query: 157 -GNL--EMEIP-----ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
G L + + P A Q K EY ++ ++F +P +K +G + R A +
Sbjct: 179 RGGLGEKAKGPRFLSSAGTQGAKEG---EYTLQQIVFVVPSDK---RGQLSARRAQANQF 232
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267
R R+ N LE A + DVS+ LL+S L PQ+ ++ S+ T T KGV
Sbjct: 233 RTRMNGCTNALE-LAKSLRDVSVRDRGRLLDSQLPPQWAKEIRALSEGGVTRTKDTDKGV 291
Query: 268 EYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E +A+C KR++ + + N + + E +Y+ +L+ A I
Sbjct: 292 EMLALCRKREVRASTSSTSADLFGGANFAEQQSETEKKYLAELKERATIQ 341
>gi|182677646|ref|YP_001831792.1| hypothetical protein Bind_0653 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633529|gb|ACB94303.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 306
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 130/273 (47%), Gaps = 6/273 (2%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ING+ IT+ D+ +R+ +L++ + E A++ L + L+ E + G+ +
Sbjct: 35 ASINGDPITNIDVDERMKMLRVLRKPATREA-AMESLYTDRLETHEAARYGVKPKDADIG 93
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-DFMLKYGNLEME 162
V+ A+ + E + L G+ +HFK + + +V + ++ E+
Sbjct: 94 QEIVRVAQEMKVQPEALIAALQNAGVSPDHFKAHFGADLAFGALVGALNKGVEASETEVR 153
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+Q K EY +R V+FS+P+N + R ++AE+ R R DC EK
Sbjct: 154 KELARQGGKAAAGTEYTLRQVIFSLPNNVAP--AAINARGQEAEQLRQRF-ADCESGEKM 210
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
++DV+I +++ +NLL K+ + T P + G+E IA+C K +
Sbjct: 211 VFALNDVTIRDPIRRTSTEISEGLRNLLDKTPVGHLTPPQRSSAGLEMIAVCRKGAALDD 270
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
AL+ +S + T++ A+ +K++R +A+I
Sbjct: 271 TALRQQISQKILATRLSADRAKRLKEMRDHAVI 303
>gi|91977437|ref|YP_570096.1| hypothetical protein RPD_2969 [Rhodopseudomonas palustris BisB5]
gi|91683893|gb|ABE40195.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 309
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 144/311 (46%), Gaps = 15/311 (4%)
Query: 16 LTTYFV-----LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+TT F+ L +FC V + A + + +NGE IT+ DI +R L +L + +
Sbjct: 1 MTTKFLFRILGLALFCTVTVGGGLGVATAQSVAVMVNGEPITNFDIEQRSKLDRLSRASR 60
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++ + ELI E +K +E +K G++ + + F + +S + + L QGI
Sbjct: 61 TRQQV-LDELIDEKVKIREGKKYGVSPSDSDIESSFSTMSSRMRMSPDQMTKMLSAQGIR 119
Query: 131 DNHFKQYLAIQSIWPDVVKNDF----MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLF 185
K + + +W +V+ F ++ +++ ++ A T EY +R V+
Sbjct: 120 PETLKSKIKAEMVWASLVRGRFKDSLLVGEKDIQAQLGAKGGDEPATTESFEYQLRPVVL 179
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ ++ + ++ R K+AE R R+ + C ++ + + +I +DL
Sbjct: 180 IV--SRGSDSSALEARRKEAESLRSRV-QSCADADRIFKALPNTAIRSTVVKTSADLPQA 236
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ +L K+ T P T++G+E +A+C ++ + K + + K + EY
Sbjct: 237 LREILDKTPVGQMTAPEATKQGIEMVALCSRKPTTADTPKKREIREKLFAEKFQAKSKEY 296
Query: 305 VKKLRSNAIIH 315
++++R+ A+I
Sbjct: 297 LREVRNAAMIE 307
>gi|316933705|ref|YP_004108687.1| SurA domain [Rhodopseudomonas palustris DX-1]
gi|315601419|gb|ADU43954.1| SurA domain [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 140/308 (45%), Gaps = 9/308 (2%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-AMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
KL L++ C + + + + I +NGE IT+ DI +R L ++ N
Sbjct: 4 KLSLRIIGLVLCCAAATLGLGTGPSQAQSIVVMVNGEPITNFDIEQRSKLNRMSHKNESR 63
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+++ + +LI E +K +E +K G+ + ++ F A +S ++ L QGI +
Sbjct: 64 QQV-LDDLIDEKVKIKEGKKYGVNPSDSDIDSSFATMASRMRMSTAQMTNMLAAQGIRPD 122
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPD 189
K + + +W +V+ F E EI A K + EY +R ++ +
Sbjct: 123 TLKSRIKAEMVWGSLVRGRFKDSLQVSEREIQAQLKGNDDSKAVESYEYQLRPIVMIV-- 180
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
++ + R K+AE+ R R+ C + ++ + + +I +DL P +++
Sbjct: 181 SRGSGSSSLDTRRKEAEQIRGRI-TSCAEADRIFKAMPNAAIRGTVVKTSADLPPALRDV 239
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
L K+ + T P VT++GVE +A+C ++ + K + + K +Y++++
Sbjct: 240 LDKTPVGHLTAPEVTKQGVEMVALCGRKQSTADTPRKREIREKLFGEKFLAKSKDYLQEV 299
Query: 309 RSNAIIHY 316
R A+I Y
Sbjct: 300 RKAAMIEY 307
>gi|307946740|ref|ZP_07662075.1| SurA N- domain family [Roseibium sp. TrichSKD4]
gi|307770404|gb|EFO29630.1| SurA N- domain family [Roseibium sp. TrichSKD4]
Length = 291
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKL-QKIN-GELEKIAVQELIVETLKKQEIEKSGIT 96
S+ I+ +NG+ IT DI++R L++L Q+ + + A +ELI + L+ +E + G+
Sbjct: 10 SAGIKVVVNGKPITTYDINQRAKLIRLIQRSSVAASRREAEKELIDDRLRLEEASRIGVK 69
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
VN + ARN L+ ++ L + G+ K L Q + V+ F +
Sbjct: 70 ISEAEVNNAYANIARNVKLTPAKLTAGLRQSGVNPQTLKDRLKAQLAFQQSVRRRFNSQV 129
Query: 157 GNLEMEIPANKQKM----KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
E +I +K KNI+V EY ++ V+ +P K ++GF KR+ ++ R +
Sbjct: 130 DVDESDIINALRKSDDENKNISV-EYNLQRVIVVVP--KKSSKGFRNKRLAESNSIR-KA 185
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIA 271
C+ K +V + LE++L P + + K + T+P T+ G E IA
Sbjct: 186 VTACDSAGAVFGKYSEVVVQPIGRRLETELPEPMRKEISKTTPGKLTSPRKTEVGFEMIA 245
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+C KR++ +IA + L + + E Y+ LR A I Y
Sbjct: 246 VCGKREIASDIAARTELENELRAKEGEALTRRYLMDLRRRASIVY 290
>gi|299133711|ref|ZP_07026905.1| SurA domain protein [Afipia sp. 1NLS2]
gi|298591547|gb|EFI51748.1| SurA domain protein [Afipia sp. 1NLS2]
Length = 314
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 15/279 (5%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NGE IT DI +R L+ L + + +LI + LK +E +K GI + ++
Sbjct: 40 VNGEPITTYDIEQRAKLIALTTHKSAPRQEVINQLIDDRLKIKEAKKFGINMTPSEIDSS 99
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + G+SA+ S L QG+ K ++ + W +V+ + E ++ A
Sbjct: 100 YAAMGQRMGMSADQLSKVLMAQGVRPETMKLRMSADTAWGALVRGRYKQSLMVSEHDVRA 159
Query: 166 ---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
++ EY +R V+ +P + + V++R K+AE R R+ + C +
Sbjct: 160 ASGGDSSPQDTESYEYHLRPVVIFVP--RGSSSAVVEQRKKEAEIIRDRV-QSCAEAATT 216
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR----D 277
+ +I +DL + LL K+ + T P VT++G+E + +CD++ D
Sbjct: 217 FKSLRQGTIRDTIIKTSADLPANLRELLDKTPVGHMTPPEVTRQGIEMVVLCDRKVTSAD 276
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ A + L AQ K E Y+ LR A+I Y
Sbjct: 277 TPAKRAARDKLFAQ----KYEAKSKSYLDDLRKAAMIEY 311
>gi|254503520|ref|ZP_05115671.1| SurA N-terminal domain family [Labrenzia alexandrii DFL-11]
gi|222439591|gb|EEE46270.1| SurA N-terminal domain family [Labrenzia alexandrii DFL-11]
Length = 314
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 9/253 (3%)
Query: 42 IRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
I+ +N ITD DI++R L L L+K + AVQELI + +K E + G++
Sbjct: 36 IKVIVNDVPITDYDITQRARLITLTLRKSASVARREAVQELIDDQVKVGEATRMGMSVSD 95
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ V+ + ARN L+ + L + G+ K+ L Q IW +V+ F
Sbjct: 96 SEVDNAYANIARNVKLTPARLTQALGQGGVRAETLKKRLRAQLIWGKLVRARFSGGVDVD 155
Query: 160 EMEIPANKQKM---KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E +I A +K T EY ++ V+ +P N + GF +R ++ + R + C
Sbjct: 156 ESDIIAALRKTDEEDRATSIEYDLQRVIVVVPKN--SSNGFKSQRRREIAQMR-KAVSSC 212
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275
+ + +V + LE+++ P + +KK T+P T G E IAIC K
Sbjct: 213 EDMGSVLGQYKEVVVQPIGRRLETEIPPNIIDQVKKLGPGKLTDPNPTPVGFEMIAICGK 272
Query: 276 RDLGGEIALKAYL 288
R++ +IA++ L
Sbjct: 273 REIQSDIAMRTKL 285
>gi|92117866|ref|YP_577595.1| hypothetical protein Nham_2343 [Nitrobacter hamburgensis X14]
gi|91800760|gb|ABE63135.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 319
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 138/307 (44%), Gaps = 8/307 (2%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
LL + L +F ++ + + + +NGE IT DI +R L+++ +
Sbjct: 6 LLRAFCHLALFAVLSFACLNAPLHAQSVAVMVNGEPITSFDIEQRSRLIQISTHKTPTRQ 65
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ELI E +K +E +K G+ S ++ + +S E + L QG+ +
Sbjct: 66 QVIDELINEKVKVKEAKKFGVNPTSADIDQQYASMGARMRMSPEQLTKSLASQGVRPDTI 125
Query: 135 KQYLAIQSIWPDVVKNDF----MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K L +W +V+ F ++ ++ + + + EY +R V+ +P
Sbjct: 126 KARLKADLVWGSLVRGRFKDSLLVSDRDVNEALRNSGEDQSKTEGFEYQMRPVVLVVPRG 185
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ ++ R K+A+ R R+ + C + + + +I + +DL P ++LL
Sbjct: 186 AAAS--VMESRRKEADALRERV-QSCADATRIFKAMRNATIRETVVKTSADLPPPIRDLL 242
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K+ + T P +T++GVE +AIC K+ + K + + K EK +Y++ +R
Sbjct: 243 DKTPVGHLTPPEITRQGVEMVAICGKKATSVDTPKKKEIREKMFAEKYEKKSKDYLEDIR 302
Query: 310 SNAIIHY 316
+A+I Y
Sbjct: 303 KSAMIEY 309
>gi|218509345|ref|ZP_03507223.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli Brasil 5]
Length = 147
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
EY+++ ++F IP+ K KR +AE SR + P C++ + FA+ + DV++
Sbjct: 2 EYMLQQIIFVIPEAK--RGAITGKRKGEAEASRSKFP-GCDQAKVFAATMRDVAVRDLGR 58
Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA---------LKAY 287
+L ++ P ++ L+++++ NTT VT KGVEY+AIC +R + + A L
Sbjct: 59 MLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKS 118
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ +N P + E + +Y+ +LR A I Y+
Sbjct: 119 KAGKNGPPENE-NSKKYLDELRKKAQIAYH 147
>gi|39936127|ref|NP_948403.1| hypothetical protein RPA3064 [Rhodopseudomonas palustris CGA009]
gi|192291845|ref|YP_001992450.1| SurA domain [Rhodopseudomonas palustris TIE-1]
gi|39649981|emb|CAE28505.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
gi|192285594|gb|ACF01975.1| SurA domain [Rhodopseudomonas palustris TIE-1]
Length = 308
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 129/275 (46%), Gaps = 8/275 (2%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NGE IT+ DI +R L ++ +++ +++LI E +K +E +K G+ + ++
Sbjct: 37 VNGEPITNFDIDQRSKLNRMSHKADSRQQV-LEDLIDEKVKIKEAKKYGVNPSDSDIDSS 95
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
F A +S ++ L QGI + K + + +W +V+ F E E+ A
Sbjct: 96 FSTMASRMRMSTAQMTNMLAAQGIRPDTLKSRIRAEMVWASLVRGRFKDSLQVSEREVQA 155
Query: 166 ---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K + EY +R V+ + + + R K+AE+ R R+ C + ++
Sbjct: 156 QLKGGDDTKAVESFEYQLRPVVMIVSRGSVSES--LDARRKEAEQLRGRI-SSCAEADRV 212
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ + +I +DL P + +L K+ + T P VT++G+E +A+C+++ +
Sbjct: 213 FKAMPNAAIRGIVIKTSADLPPALREILDKTPVGHLTPPEVTKQGIEMVALCERKQSTAD 272
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K + + K + EY++++R A+I Y
Sbjct: 273 TPRKREIREKLFGEKFQAKSKEYLQEVRKAAMIEY 307
>gi|217978373|ref|YP_002362520.1| hypothetical protein Msil_2224 [Methylocella silvestris BL2]
gi|217503749|gb|ACK51158.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 315
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 20/282 (7%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
I +ING+ IT+ DI +R+ LL++ + E A++ L + L+ E EK G+
Sbjct: 40 IVASINGDPITNIDIDQRMKLLRVLRKPATREA-AIESLFRDRLQIHEAEKYGVNPRDAD 98
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--------LAIQSIWPDVVKNDFM 153
++ V+ A L + S L G+ ++ FK Y + +Q++ V ++
Sbjct: 99 ISQQIVKTATEMNLQPQALLSALQAAGVSEDQFKSYFRANLAFTVLVQALNKGVEASETQ 158
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ E+E KQ K Y ++ ++F++P + R K+AE+ R R
Sbjct: 159 VRA---ELE----KQGGKAAAGTSYTVQQIIFTLPIGT--TPAILAARSKEAEQLRSRF- 208
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
DC + A ++DV++ +L Q + LL K+ T P + G+E +A+
Sbjct: 209 TDCKSGAEMARTLNDVTVRDQLTRSSHELGEQLRQLLDKTAIGRLTPPQRSTSGLEMVAV 268
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
C + + A++ ++ + I++ +K+LR A+I
Sbjct: 269 CARGPAKDDTAIRQTIAQKLLAAHIQEDGERRLKELRDRAVI 310
>gi|298291093|ref|YP_003693032.1| SurA domain protein [Starkeya novella DSM 506]
gi|296927604|gb|ADH88413.1| SurA domain protein [Starkeya novella DSM 506]
Length = 326
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 129/303 (42%), Gaps = 9/303 (2%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
V + + ++ A + I + G+ IT D+++RI L +L + +K A+++
Sbjct: 26 LVAGMVAACALAAFPGAASAQGILVMVQGQPITSFDVAQRIKLAQLTERLSLSQKQALED 85
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI E LK E+ G+T D + + F + A +G + + + L + G+ K +
Sbjct: 86 LIDERLKIITAERGGVTADKDEIEKMFARMANRSGRTPDQLTQALTQSGLDARMLKTKMR 145
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQ-KMKNIT----VREYLIRTVLFSIPDNKLQN 194
+W V+ + + ++ A Q K +++T EY IR V+ + + N
Sbjct: 146 ADYVWNSYVRGRYSSAATVRDSDVFAALQTKGEDLTKAQRTTEYTIRQVVLVV--GRTAN 203
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
+R+ +A R C+ + + + +D+ + ++ +
Sbjct: 204 PAQRSQRMAEANSLRKSF-TSCDGGVATVRGMREAVVRDPVIRTSADMSEGVRKVMDSTP 262
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
T P VT+ G+E +AIC +R++ GE A K + A + E + + R A+
Sbjct: 263 VGQLTPPEVTRAGIEMVAICARREVVGESAQKREVRADLETKQFEAVSKRLLAEARKGAM 322
Query: 314 IHY 316
I Y
Sbjct: 323 IQY 325
>gi|158425946|ref|YP_001527238.1| hypothetical protein AZC_4322 [Azorhizobium caulinodans ORS 571]
gi|158332835|dbj|BAF90320.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 302
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 137/300 (45%), Gaps = 10/300 (3%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F+L+ +P+++ +++ ++G+ IT D+++R+ L +L + +K ++E
Sbjct: 8 FLLVCALALPVLA--PGVALAQVLVMVSGQPITSNDVAQRMKLHQLIENKSPPQKQVLEE 65
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI E +K + + I D + VN F A +G +A+ ++ + G+ FK L
Sbjct: 66 LIDEKIKVLQAARFSIEADEDDVNRMFSNIAERSGRTADQLTASFAQSGLKVQTFKDKLR 125
Query: 140 IQSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFSIPDNKLQNQGF 197
+W V+ ++ + ++ NKQ + T EY++R ++ +
Sbjct: 126 ADYVWGQYVRARAPVVNIRDSDVIAALNKQGNADAFTATEYVLRPIILVVGGGS----NA 181
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
R+ +A R + C+ + + + + L S++ + + +L K++
Sbjct: 182 YGSRLAEANALRAKF-NGCDAGLQMIKGMKETVVRSPINRLSSEIPEKMRAVLDKTEVGR 240
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
T P V+Q GVE A+C+KR + GE + K + + + + ++ + +LR +I Y
Sbjct: 241 LTPPEVSQSGVETFAVCEKRTVKGESSKKRDIKDELSNAQFQEQSKRMMAELRKTMLIQY 300
>gi|27379215|ref|NP_770744.1| hypothetical protein bll4104 [Bradyrhizobium japonicum USDA 110]
gi|27352366|dbj|BAC49369.1| bll4104 [Bradyrhizobium japonicum USDA 110]
Length = 313
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 12/278 (4%)
Query: 46 INGEVITDGDISKR--IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+NG+ ITD DI +R + LL QK E + ELI + +K +E +K G+ + +N
Sbjct: 38 VNGDPITDFDIDQRSKLDLLTTQKTPSRQE--VINELIDDRVKLKEGKKYGVDPGVSDIN 95
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF----MLKYGNL 159
F A+ ++ + + L+ +G+ K + + +W +V+ F M+ ++
Sbjct: 96 QSFEGMAQRMRITTDQLTKSLEVKGVRPETLKARMKSEMVWTSLVRGRFKEKLMVGERDV 155
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ A I EY ++ ++ +P + + F + R+K+AE+ R R+ C +
Sbjct: 156 AQAVQAQAGDKLQIEGTEYKMQPIVLIVP--RGSSPAFQETRMKEAEQYRSRV-ASCEEA 212
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278
+ +I ++ ++L + +L + + T P VT+ G+E + +C ++
Sbjct: 213 NSLFRSTPNATIRESVTKTTAELPEALRKVLDDTPIGHLTAPEVTKAGIEMVVLCSRKPT 272
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K + + K EK + Y+ +LR A+I Y
Sbjct: 273 MIDTPKKREVREKMYQEKYEKTQKAYLDELRKAAMIEY 310
>gi|146340301|ref|YP_001205349.1| hypothetical protein BRADO3324 [Bradyrhizobium sp. ORS278]
gi|146193107|emb|CAL77118.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 287
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 129/286 (45%), Gaps = 9/286 (3%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
A + I +NG+ ITD DI +R L L + + + ELI + +K +E +K G+
Sbjct: 4 AHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVE 63
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
S+ ++ F L+AE + L+ QG+ KQ + + +W +V+ + +
Sbjct: 64 PSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERL 123
Query: 157 GNLEMEIPANKQKMKNITVR-----EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ ++ A T + EY ++ V+ +P++ NQG ++ R K+AE R R
Sbjct: 124 FVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNSS--NQGAMEIRQKEAEALRGR 181
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+ + C + + + + +D+ P + LL + + T P T++G++ +
Sbjct: 182 V-QSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV 240
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
A+C + + + Q K E Y++++R A+I Y
Sbjct: 241 ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEY 286
>gi|148255225|ref|YP_001239810.1| hypothetical protein BBta_3828 [Bradyrhizobium sp. BTAi1]
gi|146407398|gb|ABQ35904.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 312
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 17/290 (5%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
A + I +NG+ ITD DI +R+ L L + + + ELI + +K +E +K G+
Sbjct: 29 AQAQSIVVMVNGDPITDYDIEQRMKLNFLSTRKQQSRQEVINELIDDKVKIKEGKKFGVE 88
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK------- 149
++ V+ F L+AE + L+ QG+ K + + +W +V+
Sbjct: 89 PTASDVDQSFAGMGSRMRLNAEQLTKSLESQGVRPETLKARIKAEIVWTSLVRGRYKERL 148
Query: 150 --NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+D + +++Q EY ++ ++ + ++ NQ ++ R K+AE
Sbjct: 149 LVSDKDVAAAVAAAGGDSDQQGQ----AFEYKMQPIVLIVSNS--SNQAVMEARHKEAEA 202
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266
R R+ + C + I + +D+ P + LL + + T P T++G
Sbjct: 203 LRARV-QTCADANNVFKTTANAVIKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQG 261
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ +A+C + + K + + K E Y++++R A+I Y
Sbjct: 262 IQMVALCARTPTTVDTPKKRQIREEMYTKKYEATSKAYLQEVRKAAMIEY 311
>gi|301169179|emb|CBW28776.1| survival protein SurA homolog [Haemophilus influenzae 10810]
Length = 311
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G I + + + G+ + A
Sbjct: 4 FVLRSFLLAALGCVAFASMAQAGERVVATVDGIPILESQVRANMGK------KGDRQS-A 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 57 IDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQ 116
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+A Q + V V + ++ G +E K + + +EY +R +L
Sbjct: 117 QIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLK 176
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 177 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 225
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 226 YAFPETYAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYER 283
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 284 LVNTQLQDATNDWVKALRKRANIQYF 309
>gi|148827655|ref|YP_001292408.1| thymidylate kinase [Haemophilus influenzae PittGG]
gi|148718897|gb|ABR00025.1| thymidylate kinase [Haemophilus influenzae PittGG]
Length = 311
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A ++ R+ T++G I + + + G+ + A
Sbjct: 4 FVLRSFLLATLGCVAFTSMAQAAERVVATVDGIPILESQVRANMGK------KGDRQS-A 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 57 IDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQ 116
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTVLFS 186
+A Q + V G E+ A QKM + + +EY +R +L
Sbjct: 117 QIANQMVMGAVRNKAIQESIGVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLK 176
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 177 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 225
Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF ++ KS Q + P+ T+ G + + RD G++ +AY +
Sbjct: 226 YAFPETYAPQFAQIVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYER 283
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 284 LVNTQLQDATKDWVKALRKRANIQYF 309
>gi|145638627|ref|ZP_01794236.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittII]
gi|145272222|gb|EDK12130.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittII]
Length = 311
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G + + + + G+ + A
Sbjct: 4 FVLRSFLLAALGCVAFVSMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQS-A 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 57 IDKIIDDILVQKAVQESGVKIDPREIDHVVEDTAARNGLTYGQFLDALDYQGISLNAFRQ 116
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+A Q + V V + ++ G +E K + +T +EY +R +L
Sbjct: 117 QIANQMMMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVTGKEYEVRHILLK 176
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 177 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 225
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 226 YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGTRD--GDLTSEAYTQKAYER 283
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 284 LVNTQLQDATNDWVKALRKRANIQYF 309
>gi|319775614|ref|YP_004138102.1| survival protein SurA [Haemophilus influenzae F3047]
gi|317450205|emb|CBY86421.1| survival protein SurA homolog [Haemophilus influenzae F3047]
Length = 311
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G I + + + G+ + A
Sbjct: 4 FVLRSFLLAALGCVAFASMAQAGERVVATVDGIPILESQVRANMGK------KGDRQS-A 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 57 IDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQ 116
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+A Q + V V + ++ G +E K + + +EY +R +L
Sbjct: 117 QIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLK 176
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 177 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 225
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 226 YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYER 283
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 284 LVNTQLQDATNDWVKALRKRANIQYF 309
>gi|309750126|gb|ADO80110.1| Putative survival protein SurA-like protein [Haemophilus influenzae
R2866]
Length = 313
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G + + + + G+ + A
Sbjct: 6 FVLRSFLLAALGCVAFVSMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQS-A 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 59 IDKIIDDILVQKAVQESGVKIDPREIDHVVEDTAARNGLTYGQFLDALDYQGISLNAFRQ 118
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+A Q + V V + ++ G +E K + +T +EY +R +L
Sbjct: 119 QIANQMMMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVTGKEYEVRHILLK 178
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 179 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 227
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 228 YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGTRD--GDLTSEAYTQKAYER 285
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 286 LVNTQLQDATNDWVKALRKRANIQYF 311
>gi|329122338|ref|ZP_08250925.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC
11116]
gi|327473620|gb|EGF19039.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC
11116]
Length = 313
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G I + + + G+ + A
Sbjct: 6 FVLRSFLLAALGCVAFASMAQAGERVVATVDGIPILESQVRANMGK------KGDRQS-A 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 59 IDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQ 118
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+A Q + V V + ++ G +E K + + +EY +R +L
Sbjct: 119 QIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLK 178
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 179 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 227
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 228 YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYER 285
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 286 LVNTQLQDATNDWVKALRKRANIQYF 311
>gi|319898023|ref|YP_004136220.1| survival protein sura homolog [Haemophilus influenzae F3031]
gi|317433529|emb|CBY81912.1| survival protein SurA homolog [Haemophilus influenzae F3031]
Length = 311
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+ +
Sbjct: 5 ILKSFLLATLGC----VAFASMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 55 S-AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
F+Q +A Q + V V + ++ G +E K + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 225
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 226 ---YAFPETYAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKA 280
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 281 YERLVNTQLQDATKDWVKALRKRANIQYF 309
>gi|16272406|ref|NP_438619.1| stationary-phase survival protein SurA [Haemophilus influenzae Rd
KW20]
gi|260580479|ref|ZP_05848307.1| stationary-phase survival protein SurA [Haemophilus influenzae
RdAW]
gi|1174486|sp|P44721|SURA_HAEIN RecName: Full=Chaperone surA homolog; Flags: Precursor
gi|1573432|gb|AAC22116.1| stationary phase survival protein SurA, putative [Haemophilus
influenzae Rd KW20]
gi|260092821|gb|EEW76756.1| stationary-phase survival protein SurA [Haemophilus influenzae
RdAW]
Length = 313
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G + + + + G+ + A
Sbjct: 6 FVLRSFLLATLGCVAFTSMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQS-A 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 59 IDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQ 118
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTVLFS 186
+A Q + V E+ A QKM + +T +EY +R +L
Sbjct: 119 QIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVRHILLK 178
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 179 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 227
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 228 YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYER 285
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 286 LVNTQLQDATNDWVKALRKRANIQYF 311
>gi|145630363|ref|ZP_01786144.1| stationary-phase survival protein SurA [Haemophilus influenzae
R3021]
gi|144984098|gb|EDJ91535.1| stationary-phase survival protein SurA [Haemophilus influenzae
R3021]
Length = 311
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 48/326 (14%)
Query: 20 FVLIIFCIVPI--VSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
FVL F + + V++ S A + R+ T++G + + + + G+ + A
Sbjct: 4 FVLRSFLLATLGCVAFTSMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQS-A 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+Q
Sbjct: 57 IDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQ 116
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+A Q + V V + ++ G +E K + + +EY +R +L
Sbjct: 117 QIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLK 176
Query: 187 IPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 177 L--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG--- 225
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQ 291
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY +
Sbjct: 226 YAFPETYAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYER 283
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+++ ++VK LR A I Y+
Sbjct: 284 LVNTQLQDATNDWVKALRKRANIQYF 309
>gi|68249060|ref|YP_248172.1| survival protein SurA-like protein [Haemophilus influenzae
86-028NP]
gi|68057259|gb|AAX87512.1| survival protein SurA homolog [Haemophilus influenzae 86-028NP]
Length = 313
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + R + K L+
Sbjct: 7 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPILESQV--RANMGKKGDRQSALD 60
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
KI + +L+V+ + I++SG+ D ++ A GL+ F LD QGI N
Sbjct: 61 KI-IDDLLVQ----KAIQESGVKIDPREIDRVVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 227
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 228 ---YAFPETYAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKA 282
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 283 YERLVNTQLQDATNDWVKALRKRANIQYF 311
>gi|229846544|ref|ZP_04466652.1| stationary-phase survival protein SurA [Haemophilus influenzae
7P49H1]
gi|229810637|gb|EEP46355.1| stationary-phase survival protein SurA [Haemophilus influenzae
7P49H1]
Length = 311
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+ +
Sbjct: 5 ILKSFLLATLGC----VAFASMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 55 S-AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113
Query: 134 FKQYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
F+Q +A Q + V V + ++ G +E K + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 225
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 226 ---YAFPETYAPQFAQTVVKSKQGVVSAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKA 280
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 281 YERLVNTQLQDATNDWVKALRKRANIQYF 309
>gi|145632724|ref|ZP_01788458.1| thymidylate kinase [Haemophilus influenzae 3655]
gi|145634545|ref|ZP_01790254.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittAA]
gi|229844382|ref|ZP_04464522.1| stationary-phase survival protein SurA [Haemophilus influenzae
6P18H1]
gi|144986919|gb|EDJ93471.1| thymidylate kinase [Haemophilus influenzae 3655]
gi|145268090|gb|EDK08085.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittAA]
gi|229812631|gb|EEP48320.1| stationary-phase survival protein SurA [Haemophilus influenzae
6P18H1]
Length = 311
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+ +
Sbjct: 5 ILKSFLLATLGC----VAFASMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 55 S-AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
F+Q +A Q + V V + ++ G +E K + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 225
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 226 ---YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKA 280
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 281 YERLVNTQLQDATNDWVKALRKRANIQYF 309
>gi|148825262|ref|YP_001290015.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittEE]
gi|148715422|gb|ABQ97632.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittEE]
Length = 311
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 141/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+ +
Sbjct: 5 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 55 S-AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
F+Q +A Q + V V + ++ G +E K + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 225
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 226 ---YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKA 280
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 281 YERLVNTQLQDATNDWVKALRKRANIQYF 309
>gi|84684877|ref|ZP_01012777.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667212|gb|EAQ13682.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase
[Rhodobacterales bacterium HTCC2654]
Length = 414
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N +T + ++R+A L++ G++ ++A+ +LI E ++ E E+ GIT D V
Sbjct: 47 VNDSAVTVYERNQRMAFLRILNAPGDITQLALDQLINERIQLAEAERMGITADPEAVQNG 106
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A L E F +FL + GI F+ ++ +W +V + F+ + E EI
Sbjct: 107 MAEFAARGNLDVEQFGAFLAQAGIAFETFRDFVTAGIVWREVARAKFLPQVSITESEI 164
>gi|260582276|ref|ZP_05850069.1| stationary-phase survival protein SurA [Haemophilus influenzae
NT127]
gi|260094644|gb|EEW78539.1| stationary-phase survival protein SurA [Haemophilus influenzae
NT127]
Length = 313
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+ +
Sbjct: 7 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPILESQVRANMGK------KGDRQ 56
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 57 S-AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTRAEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 227
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 228 ---YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKA 282
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 283 YERLVNTQLQDATNDWVKALRKRANIQYF 311
>gi|309972385|gb|ADO95586.1| Putative survival protein SurA-like protein [Haemophilus influenzae
R2846]
Length = 313
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 139/329 (42%), Gaps = 50/329 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + R + K L+
Sbjct: 7 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPILESQV--RANMGKKGDRQSALD 60
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
KI + +L+V+ + I++SG+ D ++ A GL+ F LD QGI N
Sbjct: 61 KI-IDDLLVQ----KAIQESGVKIDPREIDRVVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIG 232
L + N L N +K++ ++ L+ KD + S + S+G
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG 227
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-- 289
Y PQF Q ++K Q + P+ T+ G + + D G++ +AY
Sbjct: 228 ---YAFPETYAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVSD--GDLTAEAYTQKA 282
Query: 290 -AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 283 YERLVNTQLQDATNDWVKALRKRANIQYF 311
>gi|145636275|ref|ZP_01791944.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittHH]
gi|145270440|gb|EDK10374.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittHH]
Length = 290
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 38/267 (14%)
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N F+
Sbjct: 35 AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFR 94
Query: 136 QYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
Q +A Q + V V + ++ G +E K + + +EY +R +L
Sbjct: 95 QQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILL 154
Query: 186 SIPDNKLQNQGFVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+ N L N +K++ ++ L+ KD + S + S+G
Sbjct: 155 KL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG-- 204
Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---A 290
Y PQF Q ++K Q + P+ T+ G + + RD G++ +AY
Sbjct: 205 -YAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYE 261
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ T+++ ++VK LR A I Y+
Sbjct: 262 RLVNTQLQDATNDWVKALRKRANIQYF 288
>gi|113461696|ref|YP_719765.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Haemophilus somnus
129PT]
gi|112823739|gb|ABI25828.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Haemophilus somnus
129PT]
Length = 314
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 32/319 (10%)
Query: 20 FVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
F ++F I+ ++S A ++ R+ T++G I + + K +L + N E +IA+
Sbjct: 6 FKAVLFSIIGLLSITITAQAAERVVATVDGNPILESQVKK---VLGKRANNEENRQIALN 62
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I + L ++ I++ GI V+ A GL+ F LD QGI ++Q +
Sbjct: 63 SIIDDLLVQKAIQELGIKVAPAHVDSVIENIAAQNGLTFGQFLDVLDYQGINYQAYRQQI 122
Query: 139 AIQSIWPDVVKNDFMLKYGNLEME----------IPANKQ-KMKNITVREYLIRTVLFSI 187
A Q + + V+N + N+ E A KQ K K +T EY +R +L +
Sbjct: 123 AYQILISE-VRNQAIGSSVNVTREEIQDLGLKLFKQAKKQGKEKKVTAPEYNVRHILLKL 181
Query: 188 PDNKLQNQGFVQKRI----KDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDL 242
N L N + ++ D +++ K K + S S+G ++
Sbjct: 182 --NPLLNDAQAKAKLTQIRADILANKITFADAALKYSKDYLSGADGGSLG---FMFPEAY 236
Query: 243 HPQFQNLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIE 298
P+F +++ S+ + P+ T+ G + + D R+ +I +AY+ Q +++
Sbjct: 237 VPEFAKVIRASKKGVISTPFKTEFGWHILEVTDIRN--ADITREAYMQEAYQQIVNQQLQ 294
Query: 299 KHEAEYVKKLRSNAIIHYY 317
+ +++K LR A I Y+
Sbjct: 295 EASGDWIKALRKRAHIQYF 313
>gi|170718609|ref|YP_001783810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus
2336]
gi|168826738|gb|ACA32109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus
2336]
Length = 321
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 142/322 (44%), Gaps = 38/322 (11%)
Query: 20 FVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
F ++F I+ ++S A ++ R+ T++G I + + K +L + N E +IA+
Sbjct: 13 FKAVLFSIIGLLSITITAQAAERVVATVDGNPILESQVKK---VLGKRANNEENRQIALN 69
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I + L ++ I++ GI V+ A GL+ F LD QGI ++Q +
Sbjct: 70 SIIDDLLVQKAIQELGIKVAPAHVDSVIENIAAQNGLTFGQFLDVLDYQGINYQAYRQQI 129
Query: 139 AIQSIWPDVVKNDFMLKYGNLEME----------IPANKQ-KMKNITVREYLIRTVLFSI 187
A Q + + V+N + N+ E A KQ K K +T EY +R +L +
Sbjct: 130 AYQILISE-VRNQAIGSSVNVTREEIQDLGLKLFKQAKKQGKEKKVTAPEYNVRHILLKL 188
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--------IHDVSIGKAQYLLE 239
N L N + ++ +++R NK+ FA + G ++
Sbjct: 189 --NPLLNDAQAKAKL-----TQIRADILANKI-TFADAALKYSKDYLSGADGGSLGFMFP 240
Query: 240 SDLHPQFQNLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPT 295
P+F +++ S+ + P+ T+ G + + D R+ +I +AY+ Q
Sbjct: 241 EAYVPEFAKVIRTSKKGVISTPFKTEFGWHILEVTDIRN--ADITREAYMQEAYQQIVNQ 298
Query: 296 KIEKHEAEYVKKLRSNAIIHYY 317
++++ +++K LR A I Y+
Sbjct: 299 QLQEASGDWIKALRKRAHIQYF 320
>gi|145628832|ref|ZP_01784632.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
gi|144979302|gb|EDJ88988.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
Length = 246
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 38/256 (14%)
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
++ +++SG+ D +++ A GL+ F LD QGI N F+Q +A Q +
Sbjct: 2 QKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQQIANQMVMGA 61
Query: 147 VVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTVLFSIPDNKLQNQG 196
V G E+ A QKM + + +EY +R +L + N L N
Sbjct: 62 VRNKAIQESIGVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLKL--NPLLNDA 119
Query: 197 FVQKRIKDAE-----------ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+K++ ++ L+ KD + S + S+G Y PQ
Sbjct: 120 QAKKQLAKIRSDIIAGKTTFADAALKYSKD------YLSGANGGSLG---YAFPETYAPQ 170
Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHE 301
F Q ++K Q + P+ T+ G + + RD G++ +AY + T+++
Sbjct: 171 FAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQLQDAT 228
Query: 302 AEYVKKLRSNAIIHYY 317
++VK LR A I Y+
Sbjct: 229 NDWVKALRKRANIQYF 244
>gi|56697307|ref|YP_167673.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Ruegeria pomeroyi DSS-3]
gi|56679044|gb|AAV95710.1| PPIC-type PPIASE domain [Ruegeria pomeroyi DSS-3]
Length = 412
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
T+LS + + L + V+ +S S IR +N VIT ++ +RI L+++
Sbjct: 5 LTTLSRCLARMMGAAALTLTLAGGPVAAQSL-FSPAIR--VNQGVITHFELEQRIRLMEV 61
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+I G+ +K A + LI E LK Q +E++GI V A LS ++F + L
Sbjct: 62 LRIPGDPQKDARRSLIEEALKMQAVEEAGIEVAPEDVQLGIDDFAARARLSTDEFLAALA 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+G+ + +++ Q W D V F+ +
Sbjct: 122 NEGVSAETVRDFVSKQMAWRDYVSARFLAR 151
>gi|126736394|ref|ZP_01752136.1| PPIC-type PPIASE domain [Roseobacter sp. CCS2]
gi|126714215|gb|EBA11084.1| PPIC-type PPIASE domain [Roseobacter sp. CCS2]
Length = 383
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 59/108 (54%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+N VIT ++S+RI LL++ + G+L + A LI + LK+QE+ + G++ + +
Sbjct: 11 TVNDRVITQYELSQRIRLLEVFRTPGDLNEAARNALIEDRLKQQELARFGVSVPEDALQQ 70
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A +S F+ L + GI + + ++ + +W D +++ F
Sbjct: 71 AMEEFAGRANMSLPQFTRVLAQDGIDISTLRDFVEVGILWRDFIRSRF 118
>gi|319943017|ref|ZP_08017300.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC
51599]
gi|319743559|gb|EFV95963.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC
51599]
Length = 491
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Query: 41 RIRTTINGEVITDGDISKRIALL--KLQKING-------ELEKIAVQELIVETLKKQEIE 91
RI +N VIT+ ++ +I L+ + + G EL K ++++I++ ++Q
Sbjct: 86 RIVAVVNQGVITESELQAQIHLIEGRAAQTPGAGVPPPDELRKQVLEQMILQLAQEQYAA 145
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
G+ V+ A+N GLS + + L +G+ + F++ L + + + + +
Sbjct: 146 DYGLKPSDAEVDRAVADVAQNNGLSTQQLTERLKDEGVSLDTFRRQLVAEIVSARLRERE 205
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
E EI A K ++ EY IR +L +P+ Q + QK D ++ R
Sbjct: 206 TASNVSISEGEIDAELAKSGKVSQPEYDIRQILLKLPEGADQKEVARQKARADELVAKAR 265
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKK-SQNNTTNPYVTQKGVEY 269
D L + S+ D + G + ++D P F + ++K + P + G
Sbjct: 266 KGADFGALAQENSEAGDAATGGSMGWRKADDLPGLFADTVRKLKPGEISAPVRSPAGFHI 325
Query: 270 IAICDKRDLG 279
+ + D+RD G
Sbjct: 326 LKLQDRRDGG 335
>gi|213018605|ref|ZP_03334413.1| hypothetical protein C1A_378 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995556|gb|EEB56196.1| hypothetical protein C1A_378 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 365
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKIN-GELEKIAVQELIVET 84
++ + A I +NGE I++ DI +RI +LL QKIN E++ +++LI E
Sbjct: 1 MLPLRLLATEIEIVADVNGEPISNLDIERRINFINSLLGTQKINQKEVKSQILRQLIDEI 60
Query: 85 LKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ E +K I + N V F Q + L A++ ++ K I N K+ +
Sbjct: 61 IIVSEAQKMNIELSNEELNNAVTLFLTQSLK---LKADEVDQYVKKHNIDLNTLKKQIKC 117
Query: 141 QSIWPDVVKNDF--MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q +W +++ ++ + E++ A KQK K+ +YLI F IPD K+
Sbjct: 118 QLLWNKIIEVGVVPLINISDQEVD-DARKQKEKS----DYLITFQEFIIPDQKIAEDLVK 172
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ R + ES +++ K L + K+ DV G
Sbjct: 173 KLRTSNNPESSIKMSKATVNLSQLKGKLKDVLEG 206
>gi|190571205|ref|YP_001975563.1| hypothetical protein WPa_0803 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357477|emb|CAQ54911.1| hypothetical protein WP0803 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 375
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 37 AMSSRIRTTINGEVITDGDISKRI----ALLKLQKIN-GELEKIAVQELIVETLKKQEIE 91
A I +NGE I++ DI +RI +LL QKIN E++ +++LI E + E +
Sbjct: 18 ATEIEIVADVNGEPISNLDIERRINFINSLLGTQKINQKEVKSQILRQLIDEIIIVSEAQ 77
Query: 92 KSGITFDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
K I + N V F Q + L A++ ++ K I N K+ + Q +W +
Sbjct: 78 KMNIELSNEELNNAVTLFLTQSLK---LKADEVDQYVKKHNIDLNTLKKQIKCQLLWNKI 134
Query: 148 VKNDF--MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ ++ + E++ A KQK K+ +YLI F IPD K+ + R +
Sbjct: 135 IEVGVVPLINISDQEVD-DARKQKEKS----DYLITFQEFIIPDQKIAEDLVKKLRTSNN 189
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIG 232
ES +++ K L + K+ DV G
Sbjct: 190 PESSIKMSKATVNLSQLKGKLKDVLEG 216
>gi|103486961|ref|YP_616522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingopyxis
alaskensis RB2256]
gi|98977038|gb|ABF53189.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingopyxis
alaskensis RB2256]
Length = 446
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL--------IVETLKKQEIEK 92
R T+NGE+IT DI +R+AL+++ N EL Q L I E L+ QE
Sbjct: 54 RPSATVNGEIITATDIEQRMALIRIANNNVELPPEEEQRLRNQVFSNLIDEKLQIQEARA 113
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
+ IT D N VN F + A + E F+++L +G KQ + + W
Sbjct: 114 ADITIDENVVNEQFARLAARFKQTPEQFAAYLASKGSSAAAVKQQIRGEFAW 165
>gi|84516316|ref|ZP_01003676.1| PPIC-type PPIASE domain [Loktanella vestfoldensis SKA53]
gi|84510012|gb|EAQ06469.1| PPIC-type PPIASE domain [Loktanella vestfoldensis SKA53]
Length = 415
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+N VIT ++++RI LL++ G++ + A LI + LK+QEI++ G+ +N
Sbjct: 42 TVNERVITQYELTQRIRLLEVFGTRGDIAQAARDALIADRLKQQEIDRVGLQVPPEAINA 101
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ A + F++ L + G+ + +++I W + V+ F + + +I
Sbjct: 102 ALDEFAGRADMDLAQFNAMLAQNGVDAVTLRDFVSIGVTWREYVRARFNREVTVTDADIA 161
Query: 165 -ANKQKMKNITVREYLIRTVLFSIP 188
A Q + + E L+ ++ + P
Sbjct: 162 RAQGQIGRATSEMEVLLNEIIIAAP 186
>gi|294678213|ref|YP_003578828.1| chaperone SurA [Rhodobacter capsulatus SB 1003]
gi|294477033|gb|ADE86421.1| chaperone SurA [Rhodobacter capsulatus SB 1003]
Length = 418
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+NG I+ +I++R ++L G++ K+A + LI + L+ + + GI+ V
Sbjct: 38 TVNGLAISGYEIAQRARFMELLGATGDVRKMAEEALIDDRLQGWKAQSLGISVSREAVTR 97
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A LSAEDF L G+ ++ ++ IW +VVK YG ++I
Sbjct: 98 GMAEFAARANLSAEDFLKALAGAGVEAQTYRDFVTSGVIWREVVKT----TYGGGRIQI 152
>gi|84500986|ref|ZP_00999221.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597]
gi|84391053|gb|EAQ03471.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597]
Length = 402
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N +V+T+ ++ +R +L+L + G+++ +A +LI + L+ Q E+ GI+ + +
Sbjct: 31 VNDKVVTEFELDQRTRMLRLFRTPGDIDALAADQLIDDRLRMQAAEEIGISPSEDQIMAG 90
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LSAE F + L + G+ F+ ++ W + ++ F
Sbjct: 91 MEEFAGRANLSAEQFVAALQQAGVAPESFRDFVRAGVAWRETIRARF 137
>gi|312113659|ref|YP_004011255.1| hypothetical protein Rvan_0880 [Rhodomicrobium vannielii ATCC
17100]
gi|311218788|gb|ADP70156.1| hypothetical protein Rvan_0880 [Rhodomicrobium vannielii ATCC
17100]
Length = 365
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 18/260 (6%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF- 123
L + G K ++ LI + LK Q ++ IT V Q A + F
Sbjct: 111 LSEGGGTSRKQVIETLIEDKLKLQAAKRLEITVSDKEVEEVLAQRAGGGDGKKPQLNEFY 170
Query: 124 --LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+ GI + + Q W DV++ + + + +P + QK + + ++ +R
Sbjct: 171 QQFEADGISRKTVQNIIRAQLAWRDVIRRQYGPRIAAMLAALPTDDQKPADGDI-QFDVR 229
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ ++ + ++ V +R+ +AE R + C L K A + D S+ +
Sbjct: 230 VLRLAVAGS---DERAVSQRMMEAENLRSKF-TSCADLPKRAKLVADASVKAVDKAKLAS 285
Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TK 296
+ Q L LK S+ T P + VE AIC K + LK +A+ P +
Sbjct: 286 FNKDAQPLILKASEGQMTPPILVSGAVEAYAICKK-----GVVLKRNPAAEQKPDARAQE 340
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ Y+++L+ +A I Y
Sbjct: 341 YDRFSRRYLQELKKSASIDY 360
>gi|94499974|ref|ZP_01306509.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65]
gi|94427832|gb|EAT12807.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65]
Length = 436
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 124/303 (40%), Gaps = 49/303 (16%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ I+ +T +L IF + + + + S I ++ +I + ++ +RI +K Q
Sbjct: 11 TSIIQQITKTALLGIFAVSLPLQAQIQTIDS-IAAVVDDGIIMESELEQRIDTIKRQSQG 69
Query: 70 GEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L + ++ LI+E L+ Q E+SG+ +N + A+ GL+ +F
Sbjct: 70 MRLPPDDILQDQVLERLIIENLQLQMAERSGMRISDEQLNQTIINIAKQNGLTLREFKKA 129
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIR 181
L+K G+ ++ + + I +V + K E ++ N + K+ T EY +
Sbjct: 130 LEKDGVSYAQAREQIRRERIISEVQRYRVGSKINISEQDVDNFLNSVRGKSATAEEYRLG 189
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD------------- 228
+L +P ++ SR +L + NK E K+ +
Sbjct: 190 HILIQVP----------------SQASRAQLKRAQNKAEDIVKKLRNGADFQQMAISQSE 233
Query: 229 ----VSIGKAQYLLESDLHPQFQNL---LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G + E++L F ++ LKK Q +NP + G I I DKR GG+
Sbjct: 234 GRNALKGGDLGWRKEAELPTLFADIVPDLKKGQ--VSNPIRSASGYHIIKISDKR--GGD 289
Query: 282 IAL 284
+
Sbjct: 290 TQM 292
>gi|146277165|ref|YP_001167324.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|145555406|gb|ABP70019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
Length = 405
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
R +N VIT+ + +R+ L + G+LEK A+ LI + ++ E++G+ + V
Sbjct: 34 RLVVNDRVITNYEFEQRVRFLTILGATGDLEKQAMDALIDDKIRLDAAERAGLKATESQV 93
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LSAE F + L K G+ F+ ++ +W ++++ F
Sbjct: 94 TEGMEEFAGRANLSAEAFVAELGKAGVAPETFRDFVHAGLVWRELMRARF 143
>gi|301155190|emb|CBW14654.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 310
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 131/318 (41%), Gaps = 41/318 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F ++ + ++ R+ T+NG I ++ + Q+ A+ ++I
Sbjct: 9 LLFAMIGLFTFSQVQAEERVVATVNGTPILQSQVNAVMGKKGSQRA-------ALDKIID 61
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ L ++ I++SG+ + VN A GL+ F LD QGI N FKQ ++ Q
Sbjct: 62 DMLTEKAIKESGVKVNQAEVNRIVEDIAAKNGLTYGQFLDALDYQGISLNAFKQQISRQM 121
Query: 143 IWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ V V + + G ++ K + + +EY +R +L + N L
Sbjct: 122 LMAGVRNHAIQNSVDVTREQVDALGKQMLDEAKAKGTAQKVMGKEYEVRHILLKL--NPL 179
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKL----------EKFASKIHDVSIGKAQYLLESDL 242
N + AE R+R K+ + + S + S+G A E+ +
Sbjct: 180 LNDAQAK-----AELERIRSEIISGKMTFADAALKYSKDYLSGANGGSLGYA--FPEAYV 232
Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEK 299
P + + Q + P+ ++ G + + RD G+ AY Q +++++
Sbjct: 233 GPFAKMVETTPQGTISAPFKSEFGWHILEVTGTRD--GDKTEDAYRQKAYEQIVNSQLQE 290
Query: 300 HEAEYVKKLRSNAIIHYY 317
++VK LR NA I Y+
Sbjct: 291 ATKDWVKALRKNADIQYF 308
>gi|260912727|ref|ZP_05919213.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Pasteurella
dagmatis ATCC 43325]
gi|260633105|gb|EEX51270.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Pasteurella
dagmatis ATCC 43325]
Length = 311
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 134/312 (42%), Gaps = 28/312 (8%)
Query: 23 IIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I F +V + + + ++ R+ T+NG + + + +K N + A+ + I
Sbjct: 10 IFFALVGLFAISTTTQAAERVVATVNGIPVLESQVKANSG----KKGN---RQAALDKAI 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L +Q I+ SG+ + V+ A GL+ F LD QGI N ++Q +A Q
Sbjct: 63 DDILVQQAIQNSGVKVNYAQVDQIIEGIAAQNGLTYGQFLDALDYQGISYNTYRQQIANQ 122
Query: 142 SIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD-- 189
+ +V V + + G ++ K K ++ ++Y +R +L +
Sbjct: 123 LLMTEVRNQAIGQSIDVTREQVEALGKQLLQEAKEKGTEKKVSGKQYEVRHILLKLNPLL 182
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQN 248
N Q + + + D ++ K K + S + S+G A E+ + P +
Sbjct: 183 NDTQAKAQLSQIRADIMAGKMTFADAALKYSKDYLSGANGGSLGFA--FPETYVGPFQKT 240
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QNTPTKIEKHEAEYV 305
++ Q + P+ T+ G + + + RD G+ L AY Q ++++ E ++V
Sbjct: 241 VITSKQGVISAPFKTEFGWHILEVTNTRD--GDRTLDAYRQQAYEQLINSQVKDAEKDWV 298
Query: 306 KKLRSNAIIHYY 317
K LR NA I Y+
Sbjct: 299 KALRKNADIQYF 310
>gi|149914655|ref|ZP_01903185.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
AzwK-3b]
gi|149811448|gb|EDM71283.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
AzwK-3b]
Length = 411
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N + IT +I +R +L L + G ++A ++LI E LK +G+ + +
Sbjct: 38 VNDQAITGYEIQQRARMLTLFRSPGNPVELAREQLIEERLKVDAARAAGLVLEDADIRVG 97
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ A ++AE+F L+ G+ + +++++ W ++V+ F + + ++
Sbjct: 98 MEEFASRANMTAEEFIGALEGAGVSEQSYREFVRAGMTWRELVRARFAPRVSVSDADLER 157
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL-RLPKDCNKLEKFAS 224
+ + + L+ ++ I Q+ VQ R A S L +P + E++++
Sbjct: 158 ARAALTEDSGVRVLLSEIIMPI---TPQDAEEVQDRA--ARISELDSIPAFSAEAERYSA 212
Query: 225 KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
G+ ++ ++L PQ + +L + ++P + V + D
Sbjct: 213 SATAARGGRLDWMSITNLPPQLRPVILALGPGDVSDPLPIEGAVALFQLRD 263
>gi|296271661|ref|YP_003654292.1| SurA domain-containing protein [Arcobacter nitrofigilis DSM 7299]
gi|296095836|gb|ADG91786.1| SurA domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 283
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F ++ ++ + M + T+N E IT DI++++A L+K + AV ELI
Sbjct: 13 VLFTLMATFTFSNAQMIDALALTVNDEPITTSDINQKMAETHLKKAD------AVSELID 66
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ L KQE+EK IT D VN + + A + G+ F S L ++ + F+
Sbjct: 67 QILYKQELEKQNITVDIFEVNDYLEKLAASNGMDLYTFKSILRQKNKNFDEFE 119
>gi|325576844|ref|ZP_08147459.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae
ATCC 33392]
gi|325161050|gb|EGC73168.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae
ATCC 33392]
Length = 310
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 41/318 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F ++ + ++ R+ T+NG I ++ + Q+ A+ ++I
Sbjct: 9 LLFAMIGLFTFSQAQAEERVVATVNGTPILQSQVNAVMGKKGSQRA-------ALDKIID 61
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ L ++ I++SG+ + VN A GL+ F LD QGI N FKQ ++ Q
Sbjct: 62 DMLTEKAIKESGVKVNQAEVNRIVEDIAAKNGLTYGQFLDALDYQGISLNAFKQQISRQM 121
Query: 143 IWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ V V + + G ++ K + + +EY +R +L + N L
Sbjct: 122 LMAGVRNHAIQNSVDVTREQVEALGKQMLDEAKAKGTAQKVMGKEYEVRHILLKL--NPL 179
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKL----------EKFASKIHDVSIGKAQYLLESDL 242
+ + AE R+R K+ + + S + S+G A E+ +
Sbjct: 180 LDDAQAK-----AELERIRSEIILGKMTFADAALKYSKDYLSGANGGSLGYA--FPEAYV 232
Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEK 299
P + + Q + P+ ++ G + + RD G+ AY Q +++++
Sbjct: 233 GPFAKMVETTPQGTVSAPFKSEFGWHILEVTGSRD--GDKTEDAYRQKAYEQIVNSQLQE 290
Query: 300 HEAEYVKKLRSNAIIHYY 317
++VK LR NA I Y+
Sbjct: 291 ATKDWVKALRKNADIQYF 308
>gi|254487361|ref|ZP_05100566.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
GAI101]
gi|214044230|gb|EEB84868.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
GAI101]
Length = 411
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 103/264 (39%), Gaps = 18/264 (6%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + P+ + +A +R+ N V+T+ ++ +R L+L G A+ LI
Sbjct: 21 LALMTATPLAAQNLFAPVARV----NESVVTEFEVQQRQRFLQLLNAPGATRDGALTSLI 76
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
E L+ + + ++GI + + A LS +F+S L++ G+ F+ ++
Sbjct: 77 DERLRNEAVAEAGIALTPEGIEDSLTEFAARANLSTAEFTSALERSGVAKETFRDFVVNS 136
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
W ++++ + + + EI + VR L ++ + P + + ++
Sbjct: 137 VGWRELIRARYNARVQITDAEINRALGATRGGGVRVLLSEIIIPAPPKDAARVNALAEQI 196
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSI----GKAQYLLESDLHPQFQNL-LKKSQNN 256
+ + + FAS+ + G+ ++ S L P Q L L +
Sbjct: 197 AQS---------RSAAEFSGFASRYSATASRGRGGRLEWQDLSSLPPSLQPLILGLAPGE 247
Query: 257 TTNPYVTQKGVEYIAICDKRDLGG 280
T P V + D ++ G
Sbjct: 248 VTAPLPIPNAVALFQLRDIQETGA 271
>gi|254417887|ref|ZP_05031611.1| SurA N-terminal domain family [Brevundimonas sp. BAL3]
gi|196184064|gb|EDX79040.1| SurA N-terminal domain family [Brevundimonas sp. BAL3]
Length = 393
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 26/258 (10%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKI---AVQELIVETLKKQEI 90
M+ I T+N ++IT D+ +++ +L ++Q L I A+ LI + LK QEI
Sbjct: 1 MADGIVATVNDKIITGFDLRQQMLMLIASSQVQPTEQNLPAIQQAALNRLIEQRLKAQEI 60
Query: 91 EK-SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K + ++ Q AR G++ + FL + GI N F++ L + W +V
Sbjct: 61 TKFESLKVTDQEIDEEIAQMARQAGVTPAAYMEFLQQGGIQPNAFRESLRTEIGWGQLVP 120
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQG------FVQKRI 202
F + +++ +++ + + +YLI + Q VQ+ I
Sbjct: 121 GRFNSRARPSTLQVDQEVRRLNDAAAQPQYLIGEIYIEAARVGGQEAAMNGARQLVQQII 180
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
+ A + ++F+S + G A ++++ + P Q + + Q +N
Sbjct: 181 QGAPFQAV--------AQQFSSAPSASARVPGDAGWVVKGTVQPALQTIFDQLQPGQLSN 232
Query: 260 PYVTQKGVEYIAICDKRD 277
P GV I + DKRD
Sbjct: 233 PIAVDGGVYIIYMRDKRD 250
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQNLLKKSQ-NNTTNPYVTQK 265
LR +C+ + A V IG L ESD L PQFQ + + + + P T
Sbjct: 285 LRQGLNCDNILSQARATQGV-IGA--DLGESDVANLAPQFQQFARTGEIGSVSTPIRTPL 341
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G+ +A+C +R G E + + + + E Y++ LRS+A+I +
Sbjct: 342 GLHLVAVCGRRVGGPEAPNRQQVEGRLRSQNLAVLERRYLRDLRSDALIEF 392
>gi|332558337|ref|ZP_08412659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides WS8N]
gi|332276049|gb|EGJ21364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides WS8N]
Length = 405
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
R +N VIT+ + +R+ L + G++EK A+ LI + ++ E++G+ +
Sbjct: 34 RLVVNDRVITNYEFEQRVRFLTILGATGDVEKQAMDALIEDKIRFDAAEQAGLKATEEQI 93
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LSAE F++ L K G+ F+ ++ IW ++++ F
Sbjct: 94 KEGMEEFAGRANLSAEQFAAELGKAGVAVETFRDFVHAGLIWRELMRAKF 143
>gi|77463460|ref|YP_352964.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|77387878|gb|ABA79063.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 435
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
R +N VIT+ + +R+ L + G++EK A+ LI + ++ E++G+ +
Sbjct: 64 RLVVNDRVITNYEFEQRVRFLTILGATGDVEKQAMDALIEDKIRFDAAEQAGLKATEEQI 123
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LSAE F++ L K G+ F+ ++ IW ++++ F
Sbjct: 124 KEGMEEFAGRANLSAEQFAAELGKAGVAVETFRDFVHAGLIWRELMRAKF 173
>gi|110680309|ref|YP_683316.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
denitrificans OCh 114]
gi|109456425|gb|ABG32630.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
denitrificans OCh 114]
Length = 406
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N VIT+ +I +R L L G + V+ELI E L+ Q + +G+ +
Sbjct: 35 VNDAVITEFEIEQRQQFLTLLNAPGSSRQAVVEELINERLRAQAVANAGLELSDAALQEG 94
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ A L ++F + L++ GI F+ ++ + W D + F + E EI
Sbjct: 95 MTEFAGRVNLGVDEFKTVLEENGIAAETFEDFVRVGVSWRDFIAARFGPRLQVSEEEIDQ 154
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNK 191
+ + L+ ++ P ++
Sbjct: 155 ALGSTNGASNIQVLVSEIIIPAPPSR 180
>gi|126462315|ref|YP_001043429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|126103979|gb|ABN76657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
Length = 435
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
R +N VIT+ + +R+ L + G++EK A+ LI + ++ E++G+ +
Sbjct: 64 RLVVNDRVITNYEFEQRVRFLTILGATGDVEKQAMDALIEDKIRFDAAEQAGLKATEEQI 123
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LSAE F++ L K G+ F+ ++ IW ++++ F
Sbjct: 124 KEGMEEFAGRANLSAEQFAAELGKAGVAVETFRDFVHAGLIWRELMRAKF 173
>gi|221639318|ref|YP_002525580.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
gi|221160099|gb|ACM01079.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
Length = 405
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
R +N VIT+ + +R+ L + G++EK A+ LI + ++ E++G+ +
Sbjct: 34 RLVVNDRVITNYEFEQRVRFLTILGATGDVEKQAMDALIEDKIRFYAAEQAGLKATEEQI 93
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LSAE F++ L K G+ F+ ++ IW ++++ F
Sbjct: 94 KEGMEEFAGRANLSAEQFAAELGKAGVAVETFRDFVHAGLIWRELMRAKF 143
>gi|260576764|ref|ZP_05844749.1| SurA domain protein [Rhodobacter sp. SW2]
gi|259021016|gb|EEW24327.1| SurA domain protein [Rhodobacter sp. SW2]
Length = 402
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
R +N VI+ ++ +RI+ + + + +E++A+ LI E L+ ++ + V
Sbjct: 31 RVYVNDRVISQYELDQRISFMTVLGLRENVEEVALNALIDERLQMTVAKQYNVKLTPKQV 90
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ A LS E+F + L G+ F+ ++ IW ++V+ F + E E
Sbjct: 91 EAGMAEFAGRAQLSTEEFLTALAPAGVEAQGFRDFVTAGLIWREIVRAKFGPRASISEAE 150
Query: 163 I-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
I A Q KN +V + L ++ P+ +L +R+K ++ R P+D K +
Sbjct: 151 IDQAIAQIDKNTSV-QILASEIVIPAPEGQLPVALATARRLK----AQSRTPEDFAKAAR 205
>gi|118590091|ref|ZP_01547494.1| hypothetical protein SIAM614_11273 [Stappia aggregata IAM 12614]
gi|118437063|gb|EAV43701.1| hypothetical protein SIAM614_11273 [Stappia aggregata IAM 12614]
Length = 132
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 42 IRTTINGEVITDGDISKRIALLKL-QKINGEL-EKIAVQELIVETLKKQEIEKSGITFDS 99
I+ +N ITD DIS+R L+ + Q+ + + +K A +EL+ + +K E E+ GI
Sbjct: 14 IKIIVNDVPITDYDISQRARLITMTQRKSASIAKKQAEEELVDDQVKLAEAERVGIDVSK 73
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ V+ F ARN +S S L G+ + K+ L Q W V+++ F
Sbjct: 74 SEVDNAFNNIARNVKMSPAQLSKALRSGGVQPDTLKERLKAQLAWNQVLRSRF 126
>gi|259419301|ref|ZP_05743218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp.
TrichCH4B]
gi|259345523|gb|EEW57377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp.
TrichCH4B]
Length = 425
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 8/266 (3%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQ 78
L + +P + + S + T+N +VIT ++ +R L L + G+ + A
Sbjct: 27 LALAVALTLPAADVGAQGLFSPV-ITVNEDVITTYELQQRARFLTVLGSVQGDPLETARN 85
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+LI + LK+Q + + G+T + + + A+ LS E+F S L + G+ + +
Sbjct: 86 DLIEDRLKRQVMREVGLTLSEDEITEGMRELAQRANLSLEEFLSGLRQAGVDPETVRDFT 145
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ W + ++ F+ + E EI +V+ L +L +N Q Q
Sbjct: 146 SAGLGWREYIRGRFLAQARPSEAEIDRAMGTAGTGSVQVLLSEIILPLTQENAAQIQELA 205
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+ + E+ +F++ + G+ ++ S L PQ Q +L
Sbjct: 206 TQISELKNEAAF-----TASAAQFSASDSSANGGRLPWMSLSRLPPQLQEVVLGLEPGQI 260
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIA 283
T P Q + + R++ G A
Sbjct: 261 TQPLPMQGAIAIFRMRGLREVDGRSA 286
>gi|323495831|ref|ZP_08100899.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio
sinaloensis DSM 21326]
gi|323319047|gb|EGA71990.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio
sinaloensis DSM 21326]
Length = 431
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQ-KINGE-------LEKIAVQELIVETLKKQEIEK 92
+I +NG VI + DI I LK K +G+ L + ++LI++TL++QE E+
Sbjct: 29 KINVIVNGGVILESDIDTSIKTLKANAKKSGQGLPTADVLRQQVTEKLIIDTLQQQEAER 88
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
GI D N +N + A+N + E S + +G+ + F++ + + I +N
Sbjct: 89 IGIRIDDNRLNEAIEEIAKNNNQTIEQLSDSIAAEGLEYSEFREQVR-KEIAATEARNAL 147
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + N+ +PA + NI +E TV + I G +Q R+ D +++
Sbjct: 148 VRRRINI---LPAEVDNLANILAQETNA-TVQYKI--------GHIQLRVNDGDDA 191
>gi|332288953|ref|YP_004419805.1| peptidyl-prolyl cis-trans isomerase SurA [Gallibacterium anatis
UMN179]
gi|330431849|gb|AEC16908.1| peptidyl-prolyl cis-trans isomerase SurA [Gallibacterium anatis
UMN179]
Length = 313
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 133/313 (42%), Gaps = 30/313 (9%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F+L++ C+ ++ +A+ ++ T+NG I + + + L + A+ +
Sbjct: 8 FLLLVGCLS--LATTGYAVE-KVVATVNGTPILNSQVKQ---ALGKRADTAANRAAALDD 61
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+I + L ++ I+ + I+ + Q A GL+ F LD QGIG+ F+Q +A
Sbjct: 62 VIDDMLVQKAIKDAKISVSQQQIQQIMHQIANENGLTYGQFLDALDYQGIGEAKFRQQIA 121
Query: 140 IQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
Q I V V + + K G K +K + +YL+ +L I
Sbjct: 122 HQIIMGQVRNKAISESISVSREQIEKLGKQMYNEAKQKGTLKTVKSPQYLVSHIL--IKT 179
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQ 247
N L N +K++ + K SK + + G + P+FQ
Sbjct: 180 NPLLNDAQAKKQLSSLRSDIIAGKTTFAAAAKTYSKDYLSGANGGSLDWNFPEVYEPEFQ 239
Query: 248 NLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA---- 302
+++K S+ + P+ T+ G + + DKRD G+ +AY+ Q ++ +A
Sbjct: 240 SMVKNSKKGVISQPFKTKYGWHILEVVDKRD--GDKTKEAYM--QKAYQQVVNQQAMEAS 295
Query: 303 -EYVKKLRSNAII 314
++VK LR +A I
Sbjct: 296 KDWVKTLRKSADI 308
>gi|83952309|ref|ZP_00961041.1| PPIC-type PPIASE domain [Roseovarius nubinhibens ISM]
gi|83837315|gb|EAP76612.1| PPIC-type PPIASE domain [Roseovarius nubinhibens ISM]
Length = 441
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGEL 72
K T V ++ + P+ + A S T+N IT +I +R L+L + G+
Sbjct: 16 KFFQTSAVALVLGLTPLTAAPVIAQSKFEAVITVNNAPITQFEIEQRARFLRLLRAPGDP 75
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+A ++LI + LK Q +SGI + + + A LS + L +G+ +
Sbjct: 76 IALAREQLIEDRLKLQAARQSGIEVNEEQIAAGMDRFASQANLSGAEMVKLLASEGVYEE 135
Query: 133 HFKQYLAIQSIWPDVVKNDF 152
F+ ++ W D+ + F
Sbjct: 136 TFRAFIIAGVSWSDLTRARF 155
>gi|260433485|ref|ZP_05787456.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417313|gb|EEX10572.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 417
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N +++T ++ +R L+L I G E + LI E L+KQ + ++GI V
Sbjct: 47 VNQDIVTWYELEQRQRFLELLGIPGSSEAEVRKALIDERLRKQAMREAGIQSAPEDVQLA 106
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A LS E+F + L G+ + Y+A Q W D V F+ + + EI
Sbjct: 107 IDEFAARGQLSPEEFLAALSDAGVAPETVRDYVASQLAWRDYVSARFISQARPTQDEI 164
>gi|163735798|ref|ZP_02143227.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
litoralis Och 149]
gi|161390884|gb|EDQ15224.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
litoralis Och 149]
Length = 415
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N VIT+ +I +R L L G + ++ELI E L+ Q + +G+ +
Sbjct: 44 VNDGVITEFEIEQRQQFLILLNAPGSSRQAVIEELINERLRAQAVANAGLELSDAAMQDG 103
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
++ A L ++F + L++ GI F+ ++ + W D + F + E EI
Sbjct: 104 MIEFAGRVNLGVDEFKTVLEENGIAATTFEDFVRVGVSWRDFIAARFGPRLQVSEEEI 161
>gi|240949661|ref|ZP_04753996.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor
NM305]
gi|240295919|gb|EER46595.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor
NM305]
Length = 317
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +L+ F +S +A R+ T++G +I + +++ + +K N E
Sbjct: 1 MKFTSAKSLLVAFVATLGLSQSLFAAEERVVATVDGNMIMESQVARALG----KKANTEA 56
Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K A++ +I E L ++ I++SG+ D V+ + A GL+ LD QGI
Sbjct: 57 NRKAALESIIDEMLVQKAIQQSGVKVDYRRVDQAIEEIAARNGLTYGQLLDALDYQGISL 116
Query: 132 NHFKQYLAIQSIWPDV 147
N ++Q +A Q + V
Sbjct: 117 NQYRQQIAQQMMMEAV 132
>gi|329903502|ref|ZP_08273518.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Oxalobacteraceae bacterium IMCC9480]
gi|327548325|gb|EGF33013.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Oxalobacteraceae bacterium IMCC9480]
Length = 475
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQ-KINGE-------LEKIAVQELIVETLKKQEIEKS 93
I +N +VIT D++ R+AL++ + K G LEK ++ +IV+ + Q S
Sbjct: 66 IVAVVNSDVITRLDLNSRVALVETRMKQQGSQLPQRALLEKQILERMIVDRAQLQLAADS 125
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAIQSIWPDVVK 149
GI D ++ + A LS +DF + L+++G + F ++ +A+Q I V
Sbjct: 126 GIKIDDVMLDRAMARLAEQNKLSMQDFRNQLEREGTPFSRFREEIREEIAMQRIREREVD 185
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
N + ++ + A K + EY + +L IP+N Q ++ D +
Sbjct: 186 NKLQITESEVDNYLDAEKNAPQ--IQPEYNLAQILIRIPENATAEQIAARRARADDVARQ 243
Query: 210 LRLPKDCNKL 219
LR D KL
Sbjct: 244 LRSGADFAKL 253
>gi|89070359|ref|ZP_01157666.1| PPIC-type PPIASE domain protein [Oceanicola granulosus HTCC2516]
gi|89044006|gb|EAR50181.1| PPIC-type PPIASE domain protein [Oceanicola granulosus HTCC2516]
Length = 405
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+N I+ +I +R LL++ G+LE +A ++L+ + LK E++++G+ ++
Sbjct: 33 TVNDSAISFYEIDQRAKLLRVFNTPGDLEALAREQLVEDRLKLAELDRAGLQLSEESLAA 92
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
A L E F L + G+ + + ++ + W D ++ +
Sbjct: 93 EMEAFAGRADLPYEQFIGVLAEAGVAEETLRDFVRVGVSWRDYIRTRY 140
>gi|83942391|ref|ZP_00954852.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36]
gi|83846484|gb|EAP84360.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36]
Length = 405
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 95/230 (41%), Gaps = 6/230 (2%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N V+T+ ++ +R L++ G + A+ LI E L+ + + ++GI +
Sbjct: 35 VNESVVTEFEVQQRQRFLEVLNAPGATREGALTSLIDERLRNEAVAEAGIELTPQGIEDS 94
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ A LS E+F+ L + G+ F+ ++ W ++V+ + + + EI
Sbjct: 95 LAEFASRADLSTEEFTQALGQSGVSRETFRDFVVNSVGWRELVRARYASRVQITDAEINR 154
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + VR L+ ++ P + + ++I ++ + + N ++++
Sbjct: 155 ALGETQGSGVR-VLVSEIIIPAPPQQAARVNALAEQISQSKSTA----EFSNYASRYSAT 209
Query: 226 IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
G+ + +DL P Q L L + T+P V + D
Sbjct: 210 ASRGRGGRLPWQNLTDLPPSLQPLILNLAPGEVTDPLPIPNAVALFQLRD 259
>gi|83953611|ref|ZP_00962332.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1]
gi|83841556|gb|EAP80725.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1]
Length = 405
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 95/230 (41%), Gaps = 6/230 (2%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N V+T+ ++ +R L++ G + A+ LI E L+ + + ++GI +
Sbjct: 35 VNESVVTEFEVQQRQRFLEVLNAPGATREGALTSLIDERLRNEAVAEAGIELTPQGIEDS 94
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ A LS E+F+ L + G+ F+ ++ W ++V+ + + + EI
Sbjct: 95 LAEFASRADLSTEEFTQALGQSGVSRETFRDFVVNSVGWRELVRARYASRVQITDAEINR 154
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + VR L+ ++ P + + ++I ++ + + N ++++
Sbjct: 155 ALGETQGSGVR-VLVSEIIIPAPPQQAARVNALAEQISQSKST----AEFSNYASRYSAT 209
Query: 226 IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
G+ + +DL P Q L L + T+P V + D
Sbjct: 210 ASRGRGGRLPWQNLTDLPPSLQPLILNLAPGEVTDPLPIPNAVALFQLRD 259
>gi|254509382|ref|ZP_05121467.1| chaperone SurA [Vibrio parahaemolyticus 16]
gi|219547690|gb|EED24730.1| chaperone SurA [Vibrio parahaemolyticus 16]
Length = 431
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE-------LEKIAVQELIV 82
++Y +I +N VI + DI I LK + NG+ L + ++LI+
Sbjct: 19 LAYAQPVALDKINVIVNSGVILESDIDTSIKTLKANARKNGQGLPEQEVLRQQVTEKLII 78
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+TL++QE E+ G+ D N +N + A+N + E S + +G+ + F++ + +
Sbjct: 79 DTLQQQEAERIGVRIDDNRLNQAIEEIAKNNNQTIEQLSDSIAAEGLEYSEFREQVR-KE 137
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
I +N + + N+ +PA + NI +E TV + I +Q R+
Sbjct: 138 IAATEARNALVRRRINI---LPAEVDNLANILAQETNA-TVQYKI--------SHIQLRV 185
Query: 203 KDAEESRLRLPKDCNKLEKFASKI 226
D + D + LEK A I
Sbjct: 186 NDGD--------DASALEKQAKDI 201
>gi|300023220|ref|YP_003755831.1| SurA domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525041|gb|ADJ23510.1| SurA domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 442
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 29/258 (11%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
++K A++ELI E LK QE +K +T + + V+ A ++ + F+ + G
Sbjct: 200 VKKQAIEELIDERLKLQEAKKQSVTIEDSEVDRVITGIAERNKMTLDQFTKQV---GGSI 256
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNL---------EMEIPANKQKMKNITVREYLIRT 182
+ K + W +VV+ ++G L +M A +++ E I+
Sbjct: 257 DPMKSRIRAALSWNEVVRR----RFGPLINVNTKDVDKMVATAAGSAQEDV---ELQIQR 309
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV---SIGKAQYLLE 239
V +P K++ G Q RI++AE+ R R DC A+ I +IGK +
Sbjct: 310 VQIMLP-KKMEEHGIAQ-RIEEAEKVRSRF-TDCKSTAAAATGIPGAKFENIGKRKS--- 363
Query: 240 SDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
S L P LL S P V VE +C + + + + + + E
Sbjct: 364 STLPEPTRTLLLNASDGEMLPPSVGDGAVELYVVCGRDSVKSDADKRTQAEGELKQKEFE 423
Query: 299 KHEAEYVKKLRSNAIIHY 316
Y+K LR +A I Y
Sbjct: 424 VMARRYLKDLREDAHIEY 441
>gi|257465500|ref|ZP_05629871.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor 202]
gi|257451160|gb|EEV25203.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor 202]
Length = 317
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +L+ F +S A R+ T++G +I + +++ + +K N E
Sbjct: 1 MKFTSAKSLLVAFVATLGLSQSLLAAEERVIATVDGNMIMESQVTRALG----KKANTEA 56
Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K A++ +I E L ++ I++SG+ D V+ + A GL+ LD QGI
Sbjct: 57 NRKAALENIIDEMLVQKAIQQSGVKVDYRRVDQAIEEIAVRNGLTYGQLLDALDYQGITL 116
Query: 132 NHFKQYLAIQSIWPDV 147
N ++Q +A Q + V
Sbjct: 117 NQYRQQIAQQMMMEAV 132
>gi|163746451|ref|ZP_02153809.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Oceanibulbus
indolifex HEL-45]
gi|161380336|gb|EDQ04747.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Oceanibulbus
indolifex HEL-45]
Length = 412
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N E IT ++ +R ++L G + LI + L+ Q +E++G+ + +
Sbjct: 41 VNDEAITGYEVQQRQRFMQLIGAPGTDSNSVIDSLIEDRLRGQILEQAGLEVTPDGIRAG 100
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP- 164
+ A LS E+F L + I + F+ ++ I + W D+++ + + + E+
Sbjct: 101 MTEFAGRADLSTEEFLKVLGQAQISEETFRDFIVISAAWRDLIRARYNGRVNITDEEVER 160
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
A N +R L ++ + P N Q ++ + + E+
Sbjct: 161 ALGSSRGNNGLRVLLSEIIIPAPPQNADQVNALAERIAQSSSEA 204
>gi|302383690|ref|YP_003819513.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
gi|302194318|gb|ADL01890.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
Length = 450
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 24/265 (9%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLKLQKINGELEKI---AVQEL 80
P+ + M+ I T+N +VIT D+ +R IA+ ++Q + I A+Q L
Sbjct: 50 APLPPQPEFKMADGIVATVNDQVITGFDLRQRMLTTIAMSQVQPTEENIPAIQQQALQGL 109
Query: 81 IVETLKKQEIEK-SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I E L+ EI K + V+ + A G + + + FL GI + ++ L
Sbjct: 110 IEERLQAAEIAKFETLKITDAEVDEEIARMAEEAGTTPQAYVEFLTSGGIRAENLREQLR 169
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-- 196
+ W ++V F + ++ A +Q + + +YL+ + Q Q
Sbjct: 170 TEIGWRELVGGRFNSRSRVSRAQVQQALRQVTETASKPQYLVGEIYLEAARVGGQQQAMN 229
Query: 197 ----FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
VQ+ ++ A + +F++ G A +L++ + P+ Q L+
Sbjct: 230 GAEQLVQQMVQGAPFQAV--------ARQFSAAPSAARGGDAGWLVQGTVQPELQAALEA 281
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKR 276
+ + P GV I + DKR
Sbjct: 282 LEVGQLSRPIPVSGGVYIIYMRDKR 306
>gi|99080787|ref|YP_612941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040]
gi|99037067|gb|ABF63679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040]
Length = 424
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 7/246 (2%)
Query: 45 TINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
T+N +VIT ++ +R L L + G+ + A +LI + LK+Q ++ G+T V
Sbjct: 50 TVNEDVITTYELEQRALFLSVLGSVQGDPFETARDDLIEDRLKRQVMKDVGLTLSEEEVT 109
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A+ L+ E+F + L++ G+ + + W + V+ F+ + E EI
Sbjct: 110 EGMRELAQRANLTLEEFLASLNQAGVAPETVRDFTTAGLGWREYVRGRFLSQARPSEAEI 169
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ +V+ L +L +N Q Q I+ +E +R A
Sbjct: 170 DRAMGTAGSGSVQVLLSEIILPLTQENAAQVQDLA---IQISELTRAEAFAASAAQFSAA 226
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
D G+ ++ S L PQ Q +L T P Q + + R++ G
Sbjct: 227 DSRTDG--GRLPWMSLSRLPPQLQEVVLGLEPGEITQPLPMQGAIAIFRMRGLREVDGRS 284
Query: 283 ALKAYL 288
A A +
Sbjct: 285 ATYAAI 290
>gi|329850880|ref|ZP_08265725.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19]
gi|328841195|gb|EGF90766.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19]
Length = 445
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 109/260 (41%), Gaps = 29/260 (11%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL-------QKINGELEKIAVQELIVETLKKQEI 90
+S + ++N ++IT D+ +R+ LL + Q+ ++ A+ L+ E L+ QE+
Sbjct: 55 LSEGMLISVNDDMITSYDLKQRMLLLIVTSGVQVTQENYAAFQQQAINGLVDERLQMQEL 114
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + D +N + A +GL+ E + L K GI K + ++ W +V
Sbjct: 115 DHWKVKVDDADINEELERMASQSGLTGEQLLTELKKVGIEPATLKSQIRAETGWSRLVGG 174
Query: 151 DFM--LKYGNLEME-----IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ K G+ +++ I A+ QK ++YL+ + G ++ K
Sbjct: 175 RYQSNAKVGSAQVDGTMDRIVADGQK------QQYLVAEIFLDP-----AQAGGIENAQK 223
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSI----GKAQYLLESDLHPQFQNLLKKSQNNTTN 259
A++ +L + A + + G A +L+ +L P + L +Q
Sbjct: 224 GAQQLYNQLQARAAPFQAVARQFSNAPSAAQGGDAGWLVADNLDPAIEVALAAAQPGEMT 283
Query: 260 PYVTQKGVEYIAICDKRDLG 279
P +T + YI + ++ G
Sbjct: 284 PPITTEDGVYIYLLRQKTTG 303
>gi|323493622|ref|ZP_08098743.1| survival protein SurA [Vibrio brasiliensis LMG 20546]
gi|323312145|gb|EGA65288.1| survival protein SurA [Vibrio brasiliensis LMG 20546]
Length = 432
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQ-KINGE-------LEKIAVQELIVETLKKQEIEKS 93
I +N V+ DI + LK K +G+ L + ++LIV+T+++QE ++
Sbjct: 30 IAVIVNSGVVLQSDIDTSLKTLKANAKKSGQSLPSEQVLREQVTEKLIVDTIQQQEAQRI 89
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ D N +N + ARN + E S+ + ++G+ F++ + + I +N +
Sbjct: 90 GVRIDDNRLNEAIEEIARNNQQTVEQLSASIAQEGLSYAEFREQVR-KEIAASEARNALV 148
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ N+ +PA + NI +E TV + I G +Q R+ D ++
Sbjct: 149 RRRINI---LPAEVDNLANILAKETNA-TVQYKI--------GHIQLRVNDGDD 190
>gi|87198910|ref|YP_496167.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
aromaticivorans DSM 12444]
gi|87134591|gb|ABD25333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
aromaticivorans DSM 12444]
Length = 456
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 41 RIRTTINGEVITDGDISKRIALL---KLQKINGE----LEKIAVQELIVETLKKQEIEKS 93
R +NGE+IT D+ +R+AL+ KI+GE L ++ LI ETL+ QE + +
Sbjct: 64 RATAIVNGEIITGTDVEQRLALIVSANGGKIDGEEKERLRMQVLRNLIDETLQIQEAKAA 123
Query: 94 GITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ D V+ + + A +N G SA+ +L + G K+ + + W ++++ +
Sbjct: 124 DVPADDGQVDASYERVATQNFGQSADALEKYLARIGSSAASLKRQIRGEIAWQNLLRRNV 183
Query: 153 MLKYGNLEMEIPANKQKMK-NITVREYLIRTV-LFSIPDNKLQ 193
E E+ Q+++ + EY I + L + +NK Q
Sbjct: 184 QPFVNVSEGEVQEAMQRLQASKGTEEYRIGEIFLAATEENKPQ 226
>gi|161830191|ref|YP_001595995.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 331]
gi|161762058|gb|ABX77700.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 331]
Length = 321
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 137/333 (41%), Gaps = 47/333 (14%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS----------RIRTTINGEVITDGDISKRIALL 63
K+LT+ ++II + I ++ + + +I +N E+IT +++ +
Sbjct: 4 KILTS--MVIILSVTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHALTAA 61
Query: 64 KLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
K Q + ++ +K + +LI + L+ Q + + I +N +N + ++ L
Sbjct: 62 KQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQANHL 121
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNIT 174
S L ++GI F+ L Q I + + +I A KQ I
Sbjct: 122 SQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAGQIA 181
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIH----D 228
+EY I T+L +P + Q Q I A+ + K K F A K+H D
Sbjct: 182 SKEYHIATILIPLPASATQAQ------INHAKGKAALILKQLQKGSSFETAMKMHPGSAD 235
Query: 229 VSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIAL 284
+ A+ L PQ + +LK N T P G I + DK ++ + +
Sbjct: 236 LGWRSAKEL------PQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKEAKNTVSDQQI 289
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K+EK +++ +LRS+A IH Y
Sbjct: 290 QRIVYQQ----KVEKALQKWLTQLRSSAYIHIY 318
>gi|167646489|ref|YP_001684152.1| SurA domain-containing protein [Caulobacter sp. K31]
gi|167348919|gb|ABZ71654.1| SurA domain [Caulobacter sp. K31]
Length = 452
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 25/213 (11%)
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--------KQ 168
A FS+ GD +++ + P+V L+ G L IP ++
Sbjct: 249 ARQFSASPTAANGGDAG---WISPGEMPPEVDAAIEQLRPGQLSAPIPVRDGVYIIYLRE 305
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PK--DCNKLEKFASK 225
K ++ V ++P + Q Q + A + L L PK +C LE A K
Sbjct: 306 KRSGAKTALVDLKQVALALPKDASQAQ------VDAANKVLLDLKPKIVNCETLEATAGK 359
Query: 226 IHDVSIGKAQYLLESDLHPQFQ---NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ V G +DL P FQ N LK Q ++P T G+ IA+C KR G +
Sbjct: 360 VEGVVAGDLGEAEITDLAPAFQQAANTLKVGQ--VSDPIRTDAGLHLIAVCGKRQSGAQA 417
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + ++ Y++ LR++A I
Sbjct: 418 PTRDQIENRLRGQQLALISKRYLRDLRNSATIE 450
>gi|110834907|ref|YP_693766.1| survival protein SurA [Alcanivorax borkumensis SK2]
gi|122070614|sp|Q0VMV4|SURA_ALCBS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|110648018|emb|CAL17494.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Alcanivorax borkumensis SK2]
Length = 435
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE------- 71
+ + ++P+ S M RI +N I ++ +RI + LQ + G+
Sbjct: 15 LLAMAVLMIPVWSQAKVQMLDRIVAVVNDGAIMASELDERINTIALQFQEKGQQLPSPAI 74
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + + +I+E L+ Q E++GI D ++N AR +S EDF++ L + G
Sbjct: 75 LREQVLDRMILERLQLQLAERAGIKVDEASLNEALAGIARQNDMSLEDFAATLREDGYSW 134
Query: 132 NHFKQYL 138
F++ +
Sbjct: 135 TQFREQI 141
>gi|215919309|ref|NP_820955.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 493]
gi|206584194|gb|AAO91469.2| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii RSA 493]
Length = 321
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 137/333 (41%), Gaps = 47/333 (14%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS----------RIRTTINGEVITDGDISKRIALL 63
K+LT+ ++II + I ++ + + +I +N E+IT +++ +
Sbjct: 4 KILTS--MVIILSVTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHALTAA 61
Query: 64 KLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
K Q + ++ +K + +LI + L+ Q + + I +N +N + ++ L
Sbjct: 62 KQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQANHL 121
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNIT 174
S L ++GI F+ L Q I + + +I A KQ I
Sbjct: 122 SQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAGQIA 181
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIH----D 228
+EY I T+L +P + Q Q I A+ + K K F A K+H D
Sbjct: 182 SKEYHIATILIPLPASATQAQ------INHAKGKAALVLKQLQKGSSFETAMKMHPGSAD 235
Query: 229 VSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIAL 284
+ A+ L PQ + +LK N T P G I + DK ++ + +
Sbjct: 236 LGWRSAKEL------PQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKEAKNTVSDQQI 289
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K+EK +++ +LRS+A IH Y
Sbjct: 290 QRIVYQQ----KVEKALQKWLTQLRSSAYIHIY 318
>gi|73667407|ref|YP_303423.1| hypothetical protein Ecaj_0794 [Ehrlichia canis str. Jake]
gi|72394548|gb|AAZ68825.1| ATP synthase F1 subcomplex epsilon subunit [Ehrlichia canis str.
Jake]
Length = 399
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKINGE-LEKIAVQE 79
L+I C++ + S +A +I +N ++I++ D+ KR+A+ K K++G +IA+
Sbjct: 12 LLILCVM-LFSSTVFA-DVKIVAMVNDDLISNLDLEKRVAINKFFYKVDGSTAAEIALDA 69
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI E++ +QE +K IT + Q L DF S+++ QG+ F Q++
Sbjct: 70 LIDESIWRQEAKKLKITVTERDILEAVKQFLVMKNLGNIDFKSYVETQGLDYKMFMQHMK 129
Query: 140 IQSIW 144
+ +W
Sbjct: 130 SKLLW 134
>gi|159043736|ref|YP_001532530.1| SurA domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157911496|gb|ABV92929.1| SurA domain protein [Dinoroseobacter shibae DFL 12]
Length = 398
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 98/225 (43%), Gaps = 20/225 (8%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+N E I+ ++ +R + ++ G+ ++A + LI + LK Q +G+ + +
Sbjct: 31 TVNNEGISGYELEQREKFVTALRLPGDPARLAREGLIEDKLKLQAARAAGLEIGIDELEL 90
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--MLKYGNLEME 162
+ A L+ E F + L +G+ F+ ++ +W ++++ F + + E+E
Sbjct: 91 GLEEFASRANLTTEQFIAALADEGVAPETFRDFVRADLVWRELIRQRFGPRARVSDAEVE 150
Query: 163 IPANKQKMKN---ITVREYLIRTVLFSIPDNKLQNQGF---VQKRIKDAEESRLRLPKDC 216
Q + I V E +I T PD +++ + +++R++ +
Sbjct: 151 RALALQGAASGARIRVAEIIIPTP----PDRRVEAETLAANIRERVQTTAQF-------S 199
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNP 260
++F++ + G ++ S+L P Q LL + ++P
Sbjct: 200 EAAQRFSAASSRANGGLRDWIAVSELPPGLAQRLLTLGPGDVSDP 244
>gi|254429963|ref|ZP_05043670.1| SurA N-terminal domain family [Alcanivorax sp. DG881]
gi|196196132|gb|EDX91091.1| SurA N-terminal domain family [Alcanivorax sp. DG881]
Length = 442
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWA-----MSSRIRTTINGEVITDGDISKRI--ALLKLQ 66
+ L L+ + ++ +W+ M RI +N I ++ +RI L+ Q
Sbjct: 11 RTLHARHTLLGLLAMAVLMLPAWSQAKVQMLDRIVAVVNDGAIMASELDERINTIALQFQ 70
Query: 67 KINGELEKIAV------QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ +L AV +++E L+ Q E+ GI D ++N AR G+S EDF
Sbjct: 71 EKGQQLPPPAVMREQVLDRMVLERLQLQLAERGGIKVDDASLNQALAGIARQNGMSLEDF 130
Query: 121 SSFLDKQGIGDNHFKQYL 138
++ L + G F++ +
Sbjct: 131 AAALRQDGYDWPQFREQI 148
>gi|86138690|ref|ZP_01057263.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193]
gi|85824750|gb|EAQ44952.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193]
Length = 396
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T++ IT ++++R + + + G+ E +A QELI + LK E+ K GI+ +
Sbjct: 25 TVDNAAITYYELNQRALFMGVLRTPGDPEVMARQELIKDRLKLAELAKVGISPSEEEITA 84
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A LS +F + L + GI + + + W + + F+ + E EI
Sbjct: 85 GMTELASRANLSLNEFLTVLKQNGIDPETVRDFTKVGIGWREYIGARFLSRARPTEAEI 143
>gi|117925616|ref|YP_866233.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp.
MC-1]
gi|117609372|gb|ABK44827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp.
MC-1]
Length = 442
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 110/252 (43%), Gaps = 20/252 (7%)
Query: 42 IRTTINGEVITDGDISK--RIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSG 94
I + GE+I + +I+ R ++K + + L + + ++ L+ Q+ ++ G
Sbjct: 35 IAAVVEGEIILESEIADQLRAQVMKFSRAGEQVDVALLRRRVLDGAVMRVLRAQKAKQLG 94
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAIQSIWPDVVKN 150
I V+ + A++ +S E F L ++G+G + + + L +Q I V+
Sbjct: 95 INLKDADVDGAVQRMAQHNNVSVEQFKMMLAREGVGFDSYLSSIRDQLYVQQIIRQVILP 154
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ ++ A +Q + I E I+ +L S+P+N L ++ + I D +S
Sbjct: 155 SVRVSDEEVQDLYKATRQDPEKIGGEPELRIKQILLSVPENALIHR---VREISDKAKSL 211
Query: 210 LRLPKDCNKLEKFASKIHD----VSIGKAQYLLESDLHPQFQNLLKKSQNNT-TNPYVTQ 264
+ + + AS+ D ++ G + +L Q ++L+ K ++ + P T
Sbjct: 212 VSQLRGGASFARLASEHSDDPSGLNGGDMGWFKRGELQAQIEDLVFKLEDGAISEPVRTT 271
Query: 265 KGVEYIAICDKR 276
+G + ++R
Sbjct: 272 QGFHIFMVAERR 283
>gi|329890123|ref|ZP_08268466.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568]
gi|328845424|gb|EGF94988.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568]
Length = 457
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 112/253 (44%), Gaps = 20/253 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRI----ALLKLQKIN---GELEKIAVQELIVETLKKQEI 90
+S I T+N +IT D+ +R+ A+ ++Q G +++ A+ +LI + L+ E+
Sbjct: 66 LSDGIIATVNDRIITGFDLRQRMLVLMAMTQVQPTEENIGAIQQQALNDLIDQHLQAAEL 125
Query: 91 EK-SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K + ++ AR G + + +FL++ GI F++ + + W ++V
Sbjct: 126 AKFEQLKIGDAEIDQEIADMARQAGTTPASYINFLEQGGISIPAFREQMRTEIGWRELVG 185
Query: 150 NDF--MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
F + G ++E +Q ++ T +YLI + + G +Q+ + A +
Sbjct: 186 GRFRDRARVGKSQIE-QTMRQMTESATKPQYLIGEIYL-----EAARVGGMQEAMNGARQ 239
Query: 208 SRLRLPKDCNKL---EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263
++ + + +F++ G A ++++ + P Q+++ +NP
Sbjct: 240 LVQQMIQGAPFMAVARQFSAAPSAARGGDAGWVVQGTVQPALQSVMDTLEAGQLSNPIPV 299
Query: 264 QKGVEYIAICDKR 276
GV + + DKR
Sbjct: 300 DGGVYILYMRDKR 312
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 240 SDLHPQFQNLLKKSQNNTTNPYV-TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+DL PQFQ + + ++ + + V T GV +A+CD+R LGG A SAQ +++
Sbjct: 378 ADLLPQFQQVARSAEVGSVSTAVRTPLGVHLLAVCDRR-LGGPDA----PSAQQVEARLQ 432
Query: 299 KHE-----AEYVKKLRSNAIIH 315
Y++ LR++A+I
Sbjct: 433 NQNYAMLGRRYLRDLRADALIE 454
>gi|260428595|ref|ZP_05782574.1| ppic-type ppiase domain protein [Citreicella sp. SE45]
gi|260423087|gb|EEX16338.1| ppic-type ppiase domain protein [Citreicella sp. SE45]
Length = 410
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 7/232 (3%)
Query: 50 VITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
VIT ++ +R +L L G +A ++L+ + L+ Q + +GI + +
Sbjct: 43 VITGYELDQRARMLTLLNAPGNTNDLAREQLVDDRLRLQAAQNAGIEPTEEEILDGMSEF 102
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQ 168
A LS E+F + L + G+ + F+ ++ + W +V++ F+ + E+ A
Sbjct: 103 AGRAQLSREEFVTALGRAGVAEQTFRDFVRAGAAWRSLVQSRFVQQSQVSPAEVDRALAG 162
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+ TVR L ++ P N + + ++ + ES + A+ D
Sbjct: 163 NGGSSTVRVLLSEIIMPLSPQNVEEVRARAERIAQMTSESEF----SAQARQYSATATRD 218
Query: 229 VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
G+ + ++L PQ + + L S T P Q V + D + G
Sbjct: 219 AG-GRLPWRELNELPPQLRPMILGLSPGQVTQPIPIQGAVALFQLRDIEETG 269
>gi|126728790|ref|ZP_01744605.1| PPIC-type PPIASE domain [Sagittula stellata E-37]
gi|126710720|gb|EBA09771.1| PPIC-type PPIASE domain [Sagittula stellata E-37]
Length = 412
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N +VIT ++ +R +L++ + G+L K+A ++LI + L+ Q +GI +
Sbjct: 38 VNEQVITGYELEQRKRMLQVMRAPGDLNKVAREQLIDDRLRLQAARDAGIQPSPEELLDG 97
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ A L+ E F+ L + G+ + ++ ++ W +V+ F + E E+
Sbjct: 98 MEEFASRASLTREQFTQALAQAGVDEETYRDFVRAGLSWRMLVQQRFAGRANVSEDEVDR 157
Query: 166 NKQKMKN--ITVREYLIRTVLFSIPDNK 191
+N TVR L+ ++ +P +
Sbjct: 158 ALSSGQNGTSTVR-VLLSEIIMPMPPGQ 184
>gi|241761719|ref|ZP_04759806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|260752284|ref|YP_003225177.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|241374027|gb|EER63560.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|258551647|gb|ACV74593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 471
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIA-----------VQELIVETLKKQEIEKSG 94
+NG +IT+ DI +R AL+ L G++ +I+ ++ LI ETL+ QE + +
Sbjct: 75 VNGTIITNTDIEQRFALI-LASAGGDVSRISEEDRNMARLQILRNLIDETLEIQEAKAND 133
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDF 152
I ++ F +ARN + E FS+ L G K+ + W ++ + +
Sbjct: 134 IIITPTELDQIFEHYARNMKKTPEAFSADLQAIGSSAKSVKRQVEADMAWRRLLGRRVEP 193
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD----------NKLQNQ 195
+ N E++ N+ K EY I + FS D NK+Q+Q
Sbjct: 194 FVNISNEEVQNIINRMKAAK-GKDEYHIAEIFFSANDTNRAEVRAKANKIQDQ 245
>gi|88658238|ref|YP_507033.1| SurA domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|88599695|gb|ABD45164.1| surA domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 395
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKL-QKINGE-LEKIAV 77
+L++F I+ Y S +S +I +N E+I++ D+ KRIA+ K K+ G E+IA+
Sbjct: 8 LLVLFIIL----YSSNVFASVKIVAMVNDELISNLDLEKRIAINKFFYKVEGNTAEEIAL 63
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
LI E++ +QE K +T + Q L D S+++ QG+ F Q+
Sbjct: 64 NALIDESIWRQEARKLKVTVTERDLLEAIKQFLVIKNLGNIDLKSYVEAQGLDYKLFVQH 123
Query: 138 LAIQSIWPDVV 148
+ + +W ++
Sbjct: 124 MKSKLLWNKIL 134
>gi|68171990|ref|ZP_00545291.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67998586|gb|EAM85338.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 395
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKL-QKINGE-LEKIAV 77
+L++F I+ Y S +S +I +N E+I++ D+ KRIA+ K K+ G E+IA+
Sbjct: 8 LLVLFIIL----YSSNVFASVKIVAMVNDELISNLDLEKRIAINKFFYKVEGNTAEEIAL 63
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
LI E++ +QE K +T + Q L D S+++ QG+ F Q+
Sbjct: 64 NALIDESIWRQEARKLKVTVTERDLLEAIKQFLVIKNLGNIDLKSYVEAQGLDYKLFVQH 123
Query: 138 LAIQSIWPDVV 148
+ + +W ++
Sbjct: 124 MKSKLLWNKIL 134
>gi|163743160|ref|ZP_02150542.1| PPIC-type PPIASE domain [Phaeobacter gallaeciensis 2.10]
gi|161383577|gb|EDQ07964.1| PPIC-type PPIASE domain [Phaeobacter gallaeciensis 2.10]
Length = 421
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F P + +A + T+N V+T+ ++ +R L L + G+ +K A ++LI+
Sbjct: 32 VMFGPAPAAAQGLFAPA----VTVNDAVVTNYELQQRARFLTLLRDPGDPQKKAREDLIL 87
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ LK + ++GI + + A LS ++F + L + G+ + + +
Sbjct: 88 DRLKLDVLAQAGIEPTEEEIVEGMTELAGRANLSLQEFLNVLGQNGVAPETLRDFTRVGI 147
Query: 143 IWPDVVKNDFMLKYGNLEMEI 163
W + V ++ + E EI
Sbjct: 148 AWREYVAARYLAQARPSEEEI 168
>gi|154706423|ref|YP_001425383.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway
5J108-111]
gi|154355709|gb|ABS77171.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway
5J108-111]
Length = 321
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 47/333 (14%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS----------RIRTTINGEVITDGDISKRIALL 63
K+LT+ ++II + I ++ + + +I +N E+IT +++ +
Sbjct: 4 KILTS--MVIILSVTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHALTAA 61
Query: 64 KLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
K Q + ++ +K + +LI + L+ Q + + I +N +N + ++ L
Sbjct: 62 KQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQANHL 121
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNIT 174
S L ++GI F+ L Q I + + +I A KQ I
Sbjct: 122 SQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAGQIA 181
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIH----D 228
EY I T+L +P + Q Q I A+ + K K F A K+H D
Sbjct: 182 STEYHIATILIPLPASATQAQ------INHAKGKAALVLKQLQKGSSFETAMKMHPGSAD 235
Query: 229 VSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIAL 284
+ A+ L PQ + +LK N T P G I + DK ++ + +
Sbjct: 236 LGWRSAKEL------PQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKEAKNTVSDQQI 289
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K+EK +++ +LRS+A IH Y
Sbjct: 290 QRIVYQQ----KVEKALQKWLTQLRSSAYIHIY 318
>gi|283856448|ref|YP_163047.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ZM4]
gi|283775452|gb|AAV89936.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 435
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIA-----------VQELIVETLKKQEIEKSG 94
+NG +IT+ DI +R AL+ L G++ +I+ ++ LI ETL+ QE + +
Sbjct: 39 VNGTIITNTDIEQRFALI-LASAGGDVSRISEEDRNMARLQILRNLIDETLEIQEAKAND 97
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDF 152
I ++ F +ARN + E FS+ L G K+ + W ++ + +
Sbjct: 98 IIITPTELDQIFEHYARNMKKTPEAFSADLQAIGSSAKSVKRQVEADMAWRRLLGRRVEP 157
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD----------NKLQNQ 195
+ N E++ N+ K EY I + FS D NK+Q+Q
Sbjct: 158 FVNISNEEVQNIINRMKAAK-GKDEYHIAEIFFSANDTNRAEVRAKANKIQDQ 209
>gi|326386746|ref|ZP_08208367.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208799|gb|EGD59595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 467
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 15/162 (9%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE-----------LIVETLKKQE 89
R +NGE+IT DI +R+AL+ NG KI +E LI ETL+ QE
Sbjct: 73 RATAIVNGEIITGTDIDQRLALII--NANGGGNKIPAEEQERLRAQVLRNLIDETLQIQE 130
Query: 90 IEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ GI D VN F + A +N G + +L G K+ + + W ++
Sbjct: 131 AKGVGIEIDEEEVNQSFDRVAQQNFGQNTAALEKYLTSIGSSAASLKRQIKGEMAWQRLL 190
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNI-TVREYLIRTVLFSIPD 189
+ + + E+ +MK EY I + S D
Sbjct: 191 RRNVQPYINVSDSEVREMMDRMKAAKGTEEYHIGEIFLSATD 232
>gi|163739707|ref|ZP_02147115.1| leucyl aminopeptidase [Phaeobacter gallaeciensis BS107]
gi|161386937|gb|EDQ11298.1| putative chaperone surA [Phaeobacter gallaeciensis BS107]
Length = 421
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F P + +A + T+N V+T+ ++ +R L L + G+ +K A ++LI+
Sbjct: 32 VMFGPAPAAAQGLFAPA----VTVNDAVVTNYELQQRARFLTLLRDPGDPQKKAREDLIL 87
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ LK + ++GI + + A LS ++F + L + G+ + + +
Sbjct: 88 DRLKLDVLAQAGIEPTEEEIVEGMTELAGRANLSLQEFLNVLGQNGVAPETLRDFTRVGI 147
Query: 143 IWPDVVKNDFMLKYGNLEMEI 163
W + V ++ + E EI
Sbjct: 148 AWREYVAARYLAQARPSEEEI 168
>gi|212213438|ref|YP_002304374.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212]
gi|212011848|gb|ACJ19229.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212]
Length = 321
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 53/336 (15%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS-------------RIRTTINGEVITDGDISKRI 60
K+LT+ V I+ + S ++A S+ +I +N E+IT +++ +
Sbjct: 4 KILTSMVV-----ILSVTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58
Query: 61 ALLKLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
K Q + ++ +K + +LI + L+ Q + + I +N +N + ++
Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKKVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMK 171
LS L ++GI F+ L Q I + + +I A KQ
Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIH-- 227
I EY I T+L +P + Q Q I A+ + K K F A K+H
Sbjct: 179 QIASTEYHIATILIPLPASATQAQ------INHAKGKAALVLKQLQKGSSFETAMKMHPG 232
Query: 228 --DVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGE 281
D+ A+ L PQ + +LK N T P G I + DK ++ +
Sbjct: 233 SADLGWRSAKEL------PQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKEAKNTVSD 286
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
++ + Q K+EK +++ +LRS+A IH Y
Sbjct: 287 QQIQRIVYQQ----KVEKALQKWLTQLRSSAYIHIY 318
>gi|156973131|ref|YP_001444038.1| hypothetical protein VIBHAR_00810 [Vibrio harveyi ATCC BAA-1116]
gi|156524725|gb|ABU69811.1| hypothetical protein VIBHAR_00810 [Vibrio harveyi ATCC BAA-1116]
Length = 427
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + +G+ + F++
Sbjct: 70 VEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAEGLSYSEFRE 129
Query: 137 YL 138
+
Sbjct: 130 QI 131
>gi|153834210|ref|ZP_01986877.1| chaperone SurA [Vibrio harveyi HY01]
gi|148869398|gb|EDL68404.1| chaperone SurA [Vibrio harveyi HY01]
Length = 427
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + +G+ + F++
Sbjct: 70 VEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAEGLSYSEFRE 129
Query: 137 YL 138
+
Sbjct: 130 QI 131
>gi|114766150|ref|ZP_01445154.1| PPIC-type PPIASE domain [Pelagibaca bermudensis HTCC2601]
gi|114541610|gb|EAU44652.1| PPIC-type PPIASE domain [Roseovarius sp. HTCC2601]
Length = 408
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 54/108 (50%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T++ VIT +I +R ++ L G + +++ ++LI + L+ + +GI +
Sbjct: 36 TVDEMVITGYEIEQRRRMMTLLNAPGNVNELSREQLIDDRLRLKAARAAGIEPSEQDILD 95
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A LS E F + L++ G+ + F+ ++ + W D+V+ F
Sbjct: 96 GMDEFAGRADLSREQFVAVLNQGGVDEETFRDFVRAGTAWRDLVRAQF 143
>gi|164685824|ref|ZP_01945801.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii 'MSU Goat Q177']
gi|165918731|ref|ZP_02218817.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 334]
gi|212219488|ref|YP_002306275.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154]
gi|164601340|gb|EAX33680.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii 'MSU Goat Q177']
gi|165917559|gb|EDR36163.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 334]
gi|212013750|gb|ACJ21130.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154]
Length = 321
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 136/333 (40%), Gaps = 47/333 (14%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS----------RIRTTINGEVITDGDISKRIALL 63
K+LT+ ++II + I ++ + + +I +N E+IT +++ +
Sbjct: 4 KILTS--MVIILSVTSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHALTAA 61
Query: 64 KLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
K Q + ++ +K + +LI + L+ Q + + I +N +N + ++ L
Sbjct: 62 KQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQANHL 121
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNIT 174
S L ++GI F+ L Q I + + +I A KQ I
Sbjct: 122 SQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAGQIA 181
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF--ASKIH----D 228
EY I T+L +P + Q Q I A+ + K K F A K+H D
Sbjct: 182 STEYHIATILIPLPASATQAQ------INHAKGKAALVLKQLQKGSSFETAMKMHPGSAD 235
Query: 229 VSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIAL 284
+ A+ L PQ + +LK N T P G + + DK ++ + +
Sbjct: 236 LGWRSAKEL------PQVFVKTVLKMKPNEVTGPIQAPNGFHIVKLLDKEAKNTVSDQQI 289
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K+EK +++ +LRS+A IH Y
Sbjct: 290 QRIVYQQ----KVEKALQKWLTQLRSSAYIHIY 318
>gi|261250209|ref|ZP_05942785.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio orientalis CIP
102891]
gi|260939325|gb|EEX95311.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio orientalis CIP
102891]
Length = 432
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 22/198 (11%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGE 71
T L+I + +V + A+ + + +N V+ DI I LK Q + E
Sbjct: 7 TLLALMIASPINLVQAEPVALDT-VAVIVNTSVVLQSDIDTSIKTLKANAKKKGQSLPSE 65
Query: 72 --LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L + ++LIV+T+++QE E+ G+ D N +N + A+N + E + + +G+
Sbjct: 66 EILTEQVTEKLIVDTIQQQEAERLGVRIDDNRLNEAISEIAKNNQQTVEQLRASIASEGL 125
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F++ + + I +N + + N+ +PA + + +E TV + I
Sbjct: 126 NYAEFREQIR-KEIAASEARNALVRRRINI---LPAEVDNLSELLAQETNA-TVQYKI-- 178
Query: 190 NKLQNQGFVQKRIKDAEE 207
G +Q R+ D ++
Sbjct: 179 ------GHIQLRVNDGDD 190
>gi|163802667|ref|ZP_02196558.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Vibrio sp. AND4]
gi|159173555|gb|EDP58375.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Vibrio sp. AND4]
Length = 427
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ + +G+
Sbjct: 63 GVLKEQVVEKLIIDTLQGQEAKRIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQMEGL 122
Query: 130 GDNHFKQYL 138
+ F++ +
Sbjct: 123 NYSEFREQI 131
>gi|269960923|ref|ZP_06175293.1| survival protein SurA [Vibrio harveyi 1DA3]
gi|269834363|gb|EEZ88452.1| survival protein SurA [Vibrio harveyi 1DA3]
Length = 427
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + +G+ F++
Sbjct: 70 VEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAEGLSYPEFRE 129
Query: 137 YL 138
+
Sbjct: 130 QI 131
>gi|260878025|ref|ZP_05890380.1| chaperone protein SurA [Vibrio parahaemolyticus AN-5034]
gi|308089886|gb|EFO39581.1| chaperone protein SurA [Vibrio parahaemolyticus AN-5034]
Length = 427
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E+ ++ + +G+
Sbjct: 65 LKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNNQSVEELAASVQAEGLSY 124
Query: 132 NHFKQYL 138
F++ +
Sbjct: 125 PEFREQI 131
>gi|28897112|ref|NP_796717.1| survival protein SurA [Vibrio parahaemolyticus RIMD 2210633]
gi|153838965|ref|ZP_01991632.1| chaperone SurA [Vibrio parahaemolyticus AQ3810]
gi|260361686|ref|ZP_05774713.1| chaperone protein SurA [Vibrio parahaemolyticus K5030]
gi|260896920|ref|ZP_05905416.1| chaperone protein SurA [Vibrio parahaemolyticus Peru-466]
gi|260903392|ref|ZP_05911787.1| chaperone protein SurA [Vibrio parahaemolyticus AQ4037]
gi|81728608|sp|Q87ST4|SURA_VIBPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|28805321|dbj|BAC58601.1| survival protein SurA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747553|gb|EDM58485.1| chaperone SurA [Vibrio parahaemolyticus AQ3810]
gi|308088746|gb|EFO38441.1| chaperone protein SurA [Vibrio parahaemolyticus Peru-466]
gi|308109029|gb|EFO46569.1| chaperone protein SurA [Vibrio parahaemolyticus AQ4037]
gi|308115514|gb|EFO53054.1| chaperone protein SurA [Vibrio parahaemolyticus K5030]
gi|328471910|gb|EGF42787.1| survival protein SurA [Vibrio parahaemolyticus 10329]
Length = 427
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E+ ++ + +G+
Sbjct: 65 LKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNNQSVEELAASVQAEGLSY 124
Query: 132 NHFKQYL 138
F++ +
Sbjct: 125 PEFREQI 131
>gi|85711793|ref|ZP_01042849.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
baltica OS145]
gi|85694408|gb|EAQ32350.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
baltica OS145]
Length = 432
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 114/280 (40%), Gaps = 13/280 (4%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---- 64
+ +K T+ + ++ CI V++ + R+ ++ VI + I + I +K
Sbjct: 1 MKQLVKFSTSVSIALMMCITATVAHAQQVLD-RVAVIVDDGVILESQIEQLIKQVKQSEN 59
Query: 65 LQKINGELEKI----AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
N +K+ A + LI + L+ Q E+ GI ++ + A++ G+S ++
Sbjct: 60 FSSANAPSDKVLRTQATERLIQQELQLQMAERMGIEVSEAQLDQAISRIAQDRGMSVDEL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREY 178
G F++ + + I V + + E+ N + + + EY
Sbjct: 120 RENTINSGQSWPAFREQIKTEIITSQVERAAVQRRVSVTPQEVENLVNLIEQNDASPTEY 179
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYL 237
+R +L + + + KR A RL +D ++L + +S + + G ++
Sbjct: 180 RLRQILIGVDSDAPNEKQEAAKRRAQAVIDRLEEGEDFSQLAIRSSSGSNALDGGDLGWM 239
Query: 238 LESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
E+ + F ++K KS+ P + G + + DKR
Sbjct: 240 TENSMPTLFAEVVKGKSKGEIIGPIRSGVGFHILQVADKR 279
>gi|152978410|ref|YP_001344039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus
succinogenes 130Z]
gi|150840133|gb|ABR74104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus
succinogenes 130Z]
Length = 317
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 130/297 (43%), Gaps = 33/297 (11%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFDS 99
++ T+NGE I + + + + ++ N E ++AV ++I + L ++ +++SG+ +
Sbjct: 30 QVVATVNGEPILESQLQRVMG----KRANTESNRRVAVDKIIDDMLVQKAVKESGVKVNP 85
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
VN A GL+ LD QGI + FK ++ Q + + V+N + K ++
Sbjct: 86 AQVNQIVHNIADQNGLTYGQLLDALDYQGISLSQFKANISNQILMAE-VRNRSIGKGVDV 144
Query: 160 EME-IPANKQKM----------KNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAE 206
E + +KM K IT +Y R +L + N Q + + + D +
Sbjct: 145 SREQVEELSRKMLQQAKAGGNPKAITATQYKARHILLKLTPLLNDAQAKAQLTQIRADIQ 204
Query: 207 ESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQ 264
+ + K + S + +G + + P+F ++ + Q + P+ T+
Sbjct: 205 SGKTTFAEAAKNYSKDYLSGANGGDLG---FAFPENYVPEFAKMMTTAKQGVISAPFKTE 261
Query: 265 KGVEYIAICDKRDLGGEIA-----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G + + D R G+I KAY + N ++ ++ ++VK LR +A I Y
Sbjct: 262 FGWHILEVTDTRQ--GDITDVAYRQKAYETLVN--EQLREYSKDWVKALRKHAEIKY 314
>gi|224438394|ref|ZP_03659321.1| hypothetical protein HcinC1_10416 [Helicobacter cinaedi CCUG 18818]
gi|313144836|ref|ZP_07807029.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129867|gb|EFR47484.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 276
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 54/267 (20%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84
C+ +VS IR +NG IT +ISK +K+ K K A+ LI E
Sbjct: 8 LCLCVLVSQAEIIAGVAIR--VNGHAITLSEISKLQTQMKISK------KAAIDMLINER 59
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAI 140
LK EIE+ I+ D ++ Q A N LS + + + + G N K+ L
Sbjct: 60 LKDDEIERFKISIDEFKIDEEISQIAANANLSKDALLAKVTRDGTTLQEYRNKIKKQLQT 119
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL----IRTVLFSIPDNKLQNQG 196
+ + ++ ++ + E E+ + K K +E+L +R V ++ QN+G
Sbjct: 120 KELMQRILASNISISS---EDELLSYYTKHK----KEFLLPSSVRVVRYT-----AQNEG 167
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQFQNLLKK 252
+Q I+ PK +I Q + E S L PQ +
Sbjct: 168 NLQNAIQS--------PK--------------TTIQGVQKINETISLSSLSPQIAQVFLN 205
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ NN P +T G +++ K LG
Sbjct: 206 TPNNEFTPVLTTGGNSFVSFLVKERLG 232
>gi|260775523|ref|ZP_05884420.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio coralliilyticus
ATCC BAA-450]
gi|260608704|gb|EEX34869.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio coralliilyticus
ATCC BAA-450]
Length = 431
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + ++LIV+T+++QE E+ G+ D N +N + A+N + + ++ + ++G+
Sbjct: 68 LREQVTEKLIVDTIQQQEAERIGVRIDDNRLNEAIDEIAKNNNQTLQQLNTSIAEEGLSY 127
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
F++ + + I + +N + + N+ +PA + NI +E TV + I
Sbjct: 128 AQFREQVR-KEIAANEARNALVRRRINI---LPAEVDNLANILAKETNA-TVQYKI---- 178
Query: 192 LQNQGFVQKRIKDA------EESRLRLPKDCNKLEKFASKIHDVSIG 232
G +Q R+ D EE ++ K+ N+ F++ + S G
Sbjct: 179 ----GHIQLRVNDGDDKAAIEEKANQIVKELNQGSDFSTMAYTYSKG 221
>gi|254229741|ref|ZP_04923149.1| ppic-type ppiase domain protein [Vibrio sp. Ex25]
gi|262392437|ref|YP_003284291.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. Ex25]
gi|151937708|gb|EDN56558.1| ppic-type ppiase domain protein [Vibrio sp. Ex25]
gi|262336031|gb|ACY49826.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. Ex25]
Length = 427
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ ++ +G+
Sbjct: 65 LKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNEQSVEQLAASVESEGLSY 124
Query: 132 NHFKQYL 138
F++ +
Sbjct: 125 PEFREQI 131
>gi|91227110|ref|ZP_01261594.1| survival protein SurA [Vibrio alginolyticus 12G01]
gi|269964662|ref|ZP_06178900.1| survival protein SurA [Vibrio alginolyticus 40B]
gi|91188762|gb|EAS75049.1| survival protein SurA [Vibrio alginolyticus 12G01]
gi|269830561|gb|EEZ84782.1| survival protein SurA [Vibrio alginolyticus 40B]
Length = 427
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L++ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ ++ +G+
Sbjct: 65 LKEQVVEKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNEQSVEQLAASVESEGLSY 124
Query: 132 NHFKQYL 138
F++ +
Sbjct: 125 PEFREQI 131
>gi|152982039|ref|YP_001352108.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp.
Marseille]
gi|151282116|gb|ABR90526.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp.
Marseille]
Length = 469
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL--KLQKING------ELEKIAVQELIVETLKKQE 89
++ I +N EVIT D +R ++ +LQ G +L++ ++ +IVE + Q+
Sbjct: 48 LADAIIVVVNNEVITRYDFLERYKMIEARLQSQGGNLPPREQLQRQLLERMIVERAQLQQ 107
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQSIWP 145
+++GI D ++ + A LS +F L++ G+ N + +AIQ +
Sbjct: 108 AKETGIKIDDTMLDRAMGRIAEQNKLSMPEFRKRLEEDGLVYSKFRNEIRDEMAIQRLRE 167
Query: 146 DVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
V N + ++EI A +E I +L +P+N Q Q KR
Sbjct: 168 REVDNKVQVS----DVEIDAYMAAHNAPAATAPQELHIAQILIRVPENATQKQLADSKRR 223
Query: 203 KDAEESRLRLPKDCNKL 219
D ++L D KL
Sbjct: 224 ADEVVAQLAAGADFAKL 240
>gi|254463317|ref|ZP_05076733.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Rhodobacterales
bacterium HTCC2083]
gi|206679906|gb|EDZ44393.1| peptidyl-prolyl cis-trans isomerase SurA, putative
[Rhodobacteraceae bacterium HTCC2083]
Length = 416
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N IT+ +I +R+ L L + G+ K+A ++LI + LK + GI+ V+
Sbjct: 45 VNDRSITNFEIDERVKFLGLLRTPGDHRKLAREQLIEDRLKLGAAQSVGISPTQEEVDAG 104
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A L +F ++ G+ ++ F+ ++ W +V+ F
Sbjct: 105 MGEFAGRVNLETAEFIKAINAGGVSEDAFRAFVLSGLAWRQLVQAKF 151
>gi|256828792|ref|YP_003157520.1| SurA domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577968|gb|ACU89104.1| SurA domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 305
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 38/296 (12%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN-GELEKIAVQEL---IVETLKKQEIEKS 93
+ RI +NGE+IT D+ ++I L Q + EKIA Q L I + + +QE ++
Sbjct: 27 LVDRIVAVVNGEIITFQDLQQQIRLSVGQTPDPATAEKIAPQVLDGMIDDVILRQEAQRL 86
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--- 150
I + V+ Q LS EDF L QG+ FK+ D+ K+
Sbjct: 87 KIEVSDSEVDNEIRQFKARRRLSEEDFERTLRLQGLTPEQFKERSR-----EDITKHKML 141
Query: 151 DFMLKYGNL--EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+M++ + + EI A ++ ++ E ++ + + D + N + K + + E S
Sbjct: 142 GYMVRRKVVVTQEEIDAYMEQNRSELTTERIVDVQMLVLVDEERANS--LWKSLSEGEVS 199
Query: 209 RLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDL------HPQFQNLLKKSQNNTTNPY 261
+ SIG KA+ + D+ P L S + P+
Sbjct: 200 -------------LEEAVERYSIGPKAENGVMRDVSWRELAEPWRDGLRNLSAGELSKPF 246
Query: 262 VTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ Q + + D+RD + A++ + K+E+ EY+ LRS AII
Sbjct: 247 LVQDKWVILKLLDRRDGVRQEDAAVEEEVREAIMRPKLEERFKEYMNGLRSKAIIQ 302
>gi|197105171|ref|YP_002130548.1| peptidyl-prolyl cis-trans isomerase family protein
[Phenylobacterium zucineum HLK1]
gi|196478591|gb|ACG78119.1| peptidyl-prolyl cis-trans isomerase family protein
[Phenylobacterium zucineum HLK1]
Length = 468
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALL-------KLQKINGELEKIAVQELIVETLKKQE 89
+S + +N E+I+ D+++R+ LL ++ + ++ A+ L+ E L+ QE
Sbjct: 74 GISESVAAVVNDEIISTYDLAQRMRLLIATSGVQPTEQTLPQFQREALVSLVDERLQFQE 133
Query: 90 I------EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ +K I V+ AR ++ E F SFL +GIG + +Q + Q
Sbjct: 134 LRRVEREQKIDIVATDEEVDEEIADMARQNNMTREQFLSFLGARGIGVDTLRQQIRAQVS 193
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLF 185
W ++ + + + +I A + +++ + +Y I VL
Sbjct: 194 WARWIRGRYGSRLRIGDDQIAATQARLEAAAAKPQYQISEVLI 236
>gi|15603073|ref|NP_246145.1| hypothetical protein PM1208 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721561|gb|AAK03292.1| SurA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 311
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 130/316 (41%), Gaps = 38/316 (12%)
Query: 23 IIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I + I+ + Y S A ++ R+ T+NG + + + K + G+ + +A+ ++I
Sbjct: 10 IFWAILGLFIYVSTAQAAERVVATVNGVPVLESQVKKNMGK------KGQYQ-VALDKVI 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L +Q I+ SGI + V+ A GL+ LD QGI N ++Q +A Q
Sbjct: 63 DDILVQQAIQNSGIKVNYAQVDQIIEGIAAQNGLTYGQLLDALDYQGISYNAYRQQIANQ 122
Query: 142 SIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ ++ V + + N + K I+ +Y +R +L + N
Sbjct: 123 ILMGEIRNQAIGQSIDVTREQVEALSNQLLNQAKQAGTEKKISAPQYEVRHILLKL--NP 180
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-------DVSIGKAQYLLESDLHP 244
L N + A+ +++R K+ + +H + G +
Sbjct: 181 LLNDAQAK-----AQLTQIRADIIAGKMSFADAALHYSKDYLSGANGGSLGFAFPEAYVG 235
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTKIEKH 300
FQ +L + + P+ T+ G + + + R+ I + KAY Q +++
Sbjct: 236 AFQKAILTTKKGVISAPFKTEFGWHILEVTNTREGDKTIDVYRQKAY--EQLVNQQVKDV 293
Query: 301 EAEYVKKLRSNAIIHY 316
E ++VK LR NA I Y
Sbjct: 294 EKDWVKALRKNAEIRY 309
>gi|254464586|ref|ZP_05077997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales
bacterium Y4I]
gi|206685494|gb|EDZ45976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales
bacterium Y4I]
Length = 305
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 51/109 (46%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+N +VIT ++ +R ++ G+ + A +ELI + LK ++++GI +
Sbjct: 44 TVNDQVITRYELEQRARFQAALRVPGDPLETAREELINDRLKLMVLKQAGIELSEEDITA 103
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ A LS +F + L +QG+ + + + W + + F+
Sbjct: 104 GMEELAGRANLSLNEFLTVLQQQGVAPQTLRDFTKVGLGWREYTRARFL 152
>gi|260773615|ref|ZP_05882531.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio metschnikovii CIP
69.14]
gi|260612754|gb|EEX37957.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio metschnikovii CIP
69.14]
Length = 431
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQ---KINGE 71
L T + + +V I + ++ + R+ +N VI DI ALL ++ K N +
Sbjct: 3 LWTLALYTLTSLVSIATVQAQPVELDRVAVIVNSGVILQSDIDS--ALLTVRANAKTNQQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LIV+TL++QE ++ G+ D NT+N + A N + E +
Sbjct: 61 TLPPENILREQIIEKLIVDTLQQQEADRIGVRIDDNTLNDAITEIAHNNQQTPEQLRLSI 120
Query: 125 DKQGIGDNHFKQYL 138
+QG+ F++ +
Sbjct: 121 AEQGLTYPEFREQI 134
>gi|58617519|ref|YP_196718.1| hypothetical protein ERGA_CDS_07920 [Ehrlichia ruminantium str.
Gardel]
gi|58417131|emb|CAI28244.1| Hypothetical protein ERGA_CDS_07920 [Ehrlichia ruminantium str.
Gardel]
Length = 425
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKL-QKINGELEK 74
T L+IF Y S A ++ ++ +NGE+I+ D+ + IA+ K ++ ++ K
Sbjct: 30 TIGLFLLIFAF-----YCSNAFANVKMVAMVNGELISSLDLERYIAISKFFYHVDSDVAK 84
Query: 75 -IAVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSAE-DFSSFLDKQG 128
IA+ LI E + KQE EK + + VN FV N + DF S+ ++QG
Sbjct: 85 DIALDSLIDEYIWKQEAEKLKVVVSEQEILDAVNQLFVMKGSNHKENHNNDFKSYTEQQG 144
Query: 129 IGDNHFKQYLAIQSIWPDVV 148
+ + Q++ + +W ++
Sbjct: 145 LDYDMLIQHVKSKLLWNKIL 164
>gi|89054302|ref|YP_509753.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Jannaschia sp. CCS1]
gi|88863851|gb|ABD54728.1| PPIC-type PPIASE domain [Jannaschia sp. CCS1]
Length = 422
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N ++T+ +I +RI L++ G+L + A++ L+ E L+ G +
Sbjct: 50 VNDTIVTNFEIGQRIRFLQVLNAQGDLREQAIEALVNERLQLDAALAVGAEASPEAIETG 109
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ A L E F + ++GI + ++A W +VV+ F
Sbjct: 110 LEEFAGRANLGPEQFLRQMAQEGIAPETVRDFVANGITWRNVVRARF 156
>gi|149927949|ref|ZP_01916199.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
gi|149823388|gb|EDM82621.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
Length = 456
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKS 93
I +N ++IT ++++++AL++ Q EL K + ++++ + Q+ E+
Sbjct: 55 IVAVVNTDIITRSELNRQVALIERQMSRRGAPLPDRIELRKQVLDRMVMDRAQLQKAEEV 114
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
GI + + + A GLS EDF + L ++G+ F++
Sbjct: 115 GIRIEEAQIEAAMARVADQNGLSLEDFLARLQEEGVSPARFRE 157
>gi|294012540|ref|YP_003546000.1| peptidyl-prolyl cis-trans isomerase SurA [Sphingobium japonicum
UT26S]
gi|292675870|dbj|BAI97388.1| peptidyl-prolyl cis-trans isomerase SurA [Sphingobium japonicum
UT26S]
Length = 461
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 46 INGEVITDGDISKRIALLKLQKING------ELEKIAVQ---ELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ NG E E++ VQ LI ETL+ QE + I
Sbjct: 75 VNGRIITGTDVDQRLALII--TANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 132
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
D ++ + + A N S F +L +QG K+ + + W +++ +
Sbjct: 133 VDKAEIDQSYERVAANFRQSPAQFDQYLRQQGSSSASIKRQIEGELAWSRLLRRNI 188
>gi|145640429|ref|ZP_01796013.1| thymidylate kinase [Haemophilus influenzae R3021]
gi|145275015|gb|EDK14877.1| thymidylate kinase [Haemophilus influenzae 22.4-21]
Length = 137
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+ +
Sbjct: 5 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPVLESQVRANMGK------KGDRQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 55 S-AIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIW 144
F+Q +A Q +
Sbjct: 114 FRQQIANQMVM 124
>gi|307294654|ref|ZP_07574496.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobium
chlorophenolicum L-1]
gi|306879128|gb|EFN10346.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobium
chlorophenolicum L-1]
Length = 461
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 46 INGEVITDGDISKRIALLKLQKING------ELEKIAVQ---ELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ NG E E++ VQ LI ETL+ QE + I
Sbjct: 75 VNGRIITGTDVDQRLALIL--TANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 132
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D ++ + + A N S F +L QG K+ + + W +++
Sbjct: 133 VDKAEIDQSYERVAANFRQSPSQFDQYLRAQGSSSASIKRQIEGELAWSRLLRR------ 186
Query: 157 GNLEMEIPANKQKMKNITVR--------EYLIRTV-LFSIPDNKLQ 193
N++ + ++ ++K++ R EY I + L + P+N+ Q
Sbjct: 187 -NIQPFVNVSEDEVKSVVDRMNAAKGSDEYRIGEIYLSATPENQQQ 231
>gi|34556608|ref|NP_906423.1| hypothetical protein WS0160 [Wolinella succinogenes DSM 1740]
gi|34482322|emb|CAE09323.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 279
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A++ LI + L + EIE+ GI+ + VN + A++ G + E F SFLD++G+ +K
Sbjct: 54 AMEMLIDKMLHQDEIERYGISTNEIEVNQEVERIAKSNGATLEQFRSFLDQKGVNWESYK 113
Query: 136 QYL 138
+ L
Sbjct: 114 EDL 116
>gi|126739402|ref|ZP_01755095.1| PPIC-type PPIASE domain [Roseobacter sp. SK209-2-6]
gi|126719502|gb|EBA16211.1| PPIC-type PPIASE domain [Roseobacter sp. SK209-2-6]
Length = 426
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T++ VIT+ ++ +R + L + G++ + A +ELI + LK +++ GI D +
Sbjct: 55 TVDSAVITNYELDQRERFMALLRTPGDIAEKAREELIDDRLKLAILDEFGIEVDDEEIKQ 114
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A LS E+F L + GI + + W + + ++ + E EI
Sbjct: 115 GMTELAGRANLSLEEFLGVLRQNGIAPETVRDLTRVGISWRNFLGARYLSQARPTEEEI 173
>gi|237746912|ref|ZP_04577392.1| chaperone SurA [Oxalobacter formigenes HOxBLS]
gi|229378263|gb|EEO28354.1| chaperone SurA [Oxalobacter formigenes HOxBLS]
Length = 468
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 47 NGEVITDGDISKRIALL--KLQKIN------GELEKIAVQELIVETLKKQEIEKSGITFD 98
N +VIT G++++RI ++ +LQK N EL+K ++ +IVE+ + Q ++ G+ D
Sbjct: 59 NNDVITMGELNERIQMIESQLQKQNVNLPPRAELQKQVLEHMIVESAQMQLAKEMGLRID 118
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-DNH---FKQYLAIQSIWPDVVKNDFML 154
++ + A + ++ F ++++ G ++H + + +Q + V N +
Sbjct: 119 DTQLDRTIARIAESKHMTVPQFQQYIERDGTSFESHREKIRSEITMQRLRDREVVNKIQI 178
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ + A+ Q VR + +L IP+N
Sbjct: 179 NDAEVDHLLGADSQMQMPEQVR---LGHILIRIPEN 211
>gi|239818232|ref|YP_002947142.1| SurA domain protein [Variovorax paradoxus S110]
gi|239804809|gb|ACS21876.1| SurA domain protein [Variovorax paradoxus S110]
Length = 469
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 46 INGEVITDGDISKRIALL-----KLQKI-NGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+N E IT+ ++ R+ L + +++ EL ++ ++ LI E + Q +++GI D
Sbjct: 69 VNSEPITNTEVQSRVTRLIRENAEAERVPRAELTRLVLERLISERAQLQLAKENGIKVDE 128
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
++ AR +S E+ + +GI F+ L Q + + + K
Sbjct: 129 VAIDQAEQTVARQNQISVEELRRRVVAEGISQREFRNDLRDQLLLTRLRDREVESKVKIS 188
Query: 160 EMEIPANKQKMKNITVREYLIRTV-----LFSIPDNKLQNQ-GFVQKRIKDAEESRLRLP 213
+ E + +N ++ ++ + L ++P+N + Q +Q+R + + R R
Sbjct: 189 DAEADEYLRDQRNAPTKDAALQNINLAHLLVAVPENATEAQVATLQQRAQGLAQ-RARAG 247
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN----PYVTQKGVEY 269
+D KL + S D + G A + +D +P ++ +Q+ N P + G
Sbjct: 248 EDFAKLVQENSDSPDRANGGAVGMRTADRYPSL--FVEATQSTPVNGIAGPIRSGAGFHV 305
Query: 270 IAICDKRDLGG 280
+ + K LG
Sbjct: 306 LKVLAKAQLGA 316
>gi|254511943|ref|ZP_05124010.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535654|gb|EEE38642.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11]
Length = 417
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 13/148 (8%)
Query: 27 IVPIVSYKSWAM-----------SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
I+P+++ AM S IR +N +++T ++ +R L+L E
Sbjct: 19 ILPVMALALTAMATPQAQGQSLFSPAIR--VNQDIVTWYELEQRQQFLELLGAPNSSEIE 76
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ LI + L+KQ + ++GI V A LS+E+F L+ G+ +
Sbjct: 77 VREALIDDRLRKQVMREAGIEAAPEAVETGIDDIAARGNLSSEEFLQLLNDAGVSRETVR 136
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
++A Q W D + F+ + E EI
Sbjct: 137 DFVADQLTWRDYISARFLSQARPSEDEI 164
>gi|149194720|ref|ZP_01871815.1| possible periplasmic protein [Caminibacter mediatlanticus TB-2]
gi|149135143|gb|EDM23624.1| possible periplasmic protein [Caminibacter mediatlanticus TB-2]
Length = 271
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F+LI+ + ++ + + R+ +NGE IT DI+K L + + A+
Sbjct: 4 FILILIFL----NFVNAKIVDRVVAVVNGEPITSYDITKTFKSLNIS------PREALNI 53
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN---HFKQ 136
LI + + + EI++ GI D + + A+ G+S +F ++L ++G +N + K+
Sbjct: 54 LIDQKIIENEIKRRGIEVDDFDIENAIEKIAKQNGMSVFEFKNYLKERGEYNNFLKNLKK 113
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK---MKNITVREYL 179
+ Q ++ +V + + L+ NK+K K I V EY+
Sbjct: 114 DIQKQKLFAQIVNSKLKVSNKELKNFYDQNKEKFTTFKQIEVIEYI 159
>gi|221234696|ref|YP_002517132.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
gi|220963868|gb|ACL95224.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
Length = 449
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
C LE A+K+ + G +DL P FQ K + ++P T G+ IA+C
Sbjct: 347 CQSLEATAAKVDGLVAGDLGEAEITDLAPAFQEAANKLEVGQISDPIRTDAGLHLIAVCG 406
Query: 275 KRDLGGEIALKAYLSAQNTPT--KIEKH---------EAEYVKKLRSNAIIH 315
KR G N PT +IE Y++ LR+ A I
Sbjct: 407 KRQGGA-----------NAPTHDQIENRLRGQQLALIAKRYLRDLRNQATIE 447
>gi|154253778|ref|YP_001414602.1| SurA domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154157728|gb|ABS64945.1| SurA domain [Parvibaculum lavamentivorans DS-1]
Length = 443
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
L++ +L PD + Q V +R ++AEE R R C+ + +K + + ++
Sbjct: 308 LMQVLLPLTPDAEPQA---VSRRAREAEEFR-RQTNSCDDAARNITKYLSGAASPKRDVI 363
Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
L P+ + L NTT P +++G+E + +C + GE
Sbjct: 364 AGQLDPRLRQALSGLKAGNTTAPIRSERGIEMVVVCGHKAAEGE 407
>gi|114328860|ref|YP_746017.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
gi|114317034|gb|ABI63094.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
Length = 468
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 15/249 (6%)
Query: 42 IRTTINGEVITDGDISKRIALLKL-------QKINGELEKIAVQELIVETLKKQEIEKSG 94
I +NG+VI+ GD+ R L + +++ L +++L+ E L+ QEI++ G
Sbjct: 72 IVAVVNGDVISKGDVDARRRLFAMSTGLPMSKEVLDRLTPQVLRQLVDEKLRLQEIQRRG 131
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I + + + + G+ + L G+ + +Q W V++
Sbjct: 132 IVITDSDIAHSIQGMEQRNGMQPDALRHKLAADGVSMRTLIDQIRVQLGWTRVLRQQLGE 191
Query: 155 KYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSI--PDNKLQNQGFVQKRIKDAEESRLR 211
+ + EI ++ + + + EY + + + P F I+ S
Sbjct: 192 RVRISDKEIQDEEELLASQKGQTEYRVSEIFIPVDDPSRAQAAHDFADTVIQQL-RSGAP 250
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270
P + + + + +G ++ + L PQ ++LK+ +NP G+E +
Sbjct: 251 FPVVAAQFSQSQTALEGGDLG---WVQPNQLDPQVVSVLKEMPPGAISNPIDVAGGIEIV 307
Query: 271 AICDKRDLG 279
A+ KR +G
Sbjct: 308 ALRGKRIIG 316
>gi|16125933|ref|NP_420497.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter
crescentus CB15]
gi|13423099|gb|AAK23665.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter
crescentus CB15]
Length = 501
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
C LE A+K+ + G +DL P FQ K + ++P T G+ IA+C
Sbjct: 399 CQSLEATAAKVDGLVAGDLGEAEITDLAPAFQEAANKLEVGQISDPIRTDAGLHLIAVCG 458
Query: 275 KRDLGGEIALKAYLSAQNTPT--KIEKH---------EAEYVKKLRSNAIIH 315
KR G N PT +IE Y++ LR+ A I
Sbjct: 459 KRQGGA-----------NAPTHDQIENRLRGQQLALIAKRYLRDLRNQATIE 499
>gi|307825062|ref|ZP_07655283.1| SurA domain protein [Methylobacter tundripaludum SV96]
gi|307733810|gb|EFO04666.1| SurA domain protein [Methylobacter tundripaludum SV96]
Length = 434
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETLKKQEIEKS 93
I + +VI + ++ K +A++ ++Q+ N L K ++++IV+ L++Q EK+
Sbjct: 34 IIAVVEEDVILERELQKEVAVIEQRIQQSNAAIPPAYVLRKQVLEKMIVDKLQRQLAEKA 93
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
GIT +N AR + E F + L+ QGI F
Sbjct: 94 GITVSEEMLNSSAADIARRNNMDIEQFRAELEGQGISYQSF 134
>gi|170724097|ref|YP_001751785.1| outer membrane porin [Pseudomonas putida W619]
gi|169762100|gb|ACA75416.1| outer membrane porin [Pseudomonas putida W619]
Length = 439
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 85 LKKQEIEKSGITFDSNTV-----------NYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ KQ ++ +G+ DSNT+ + F + H R+TG + ++ + ++ G+GD
Sbjct: 258 IDKQYVQAAGLNGDSNTIWSLAATYAYGAHSFTLAHQRSTGSTGYNYGWYQNEGGVGDGG 317
Query: 134 FKQYLAIQSIWPDVVKND---FMLKYG 157
YLA S W D D + L YG
Sbjct: 318 STIYLA-NSYWSDFNAEDERSWQLGYG 343
>gi|322379755|ref|ZP_08054065.1| chaperone SurA [Helicobacter suis HS5]
gi|321147826|gb|EFX42416.1| chaperone SurA [Helicobacter suis HS5]
Length = 371
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 113/256 (44%), Gaps = 28/256 (10%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+K+N + A+ LI++ ++ QEI++ I + + V+ A++ G++ DF L
Sbjct: 137 EKVNHVNRQQAINSLILQRIQAQEIKRLKIDIEDDKVDAEIENIAKHNGMNVSDFMRTLA 196
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRTVL 184
+GI +K L Q ++++N + N +REY
Sbjct: 197 GEGINPVAYKAQLKKQLETRELLRNILLF-----------NANTNSETKMREYYNAHRDE 245
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F++P + L + + K + ++ LE + + V+ G+ + +++ L+P
Sbjct: 246 FTVPSDVLATR-YTAKDTQTLTQA----------LEHKDTDVPGVTKGEERISIKA-LNP 293
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIAL---KAYLSAQNTPTKIEKH 300
Q + ++ +T P + G Y+A + LG E++ + +++ + + +K
Sbjct: 294 QIAQMFLSTKEHTFTPILNAGGGNYVAFYIEEKLGKQEVSFAQARGFIANKLIEEQQDKI 353
Query: 301 EAEYVKKLRSNAIIHY 316
AEY +KLR A I +
Sbjct: 354 LAEYYEKLRVKAKIKF 369
>gi|332185309|ref|ZP_08387058.1| PPIC-type PPIASE domain protein [Sphingomonas sp. S17]
gi|332015033|gb|EGI57089.1| PPIC-type PPIASE domain protein [Sphingomonas sp. S17]
Length = 475
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 34/254 (13%)
Query: 46 INGEVITDGDISKRIALL----KLQKINGE----LEKIAVQELIVETLKKQEIEKSGITF 97
+N V+T D+ +R+AL + K++ E L +++LI ETL+ QE + + IT
Sbjct: 87 VNDTVLTGTDLDQRMALAMALNNVTKLSPEDRDRLRMQILRQLIDETLQIQEAKSAEITV 146
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ + + ++ G + ++FL + G + ++ + + W N ++ K
Sbjct: 147 TAPEIDQAYARFSQQFGKTPTQMTAFLRQVGSSERSMRRQIEGELAW-----NRYLRK-- 199
Query: 158 NLEMEIPANKQKMKNITVR--------EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+E I +++ I R EY ++ + S + Q Q F R AE
Sbjct: 200 RVEPFINVGDEEVNAIRARLEAAKGTEEYNLKEIFLSA-NEATQQQVFANARQIIAE--- 255
Query: 210 LRLPKDCNKLEKFASKIHDVSI----GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
+ K E FA + S G ++ + L P+ Q+ + Q P
Sbjct: 256 --IQKGQQPFEYFARSFSEASTRAVNGDLGWVRAAQLPPELQSAAQSMQVGQVAGPIPIP 313
Query: 265 KGVEYIAICDKRDL 278
G + + DKR +
Sbjct: 314 GGFSILYLTDKRQV 327
>gi|261855875|ref|YP_003263158.1| SurA domain protein [Halothiobacillus neapolitanus c2]
gi|261836344|gb|ACX96111.1| SurA domain protein [Halothiobacillus neapolitanus c2]
Length = 465
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 21/242 (8%)
Query: 12 FIKLLTTYFVL-------IIFCIVPIVSYKSWA----MSSRIRTTINGEVITDGDISKRI 60
F +L + L ++F I + + A M RI +N VIT ++ RI
Sbjct: 14 FARLTPAWLALAAGLSFGVVFSTPTIAADLTPAAGEQMFDRIVAVVNQSVITQRQLNDRI 73
Query: 61 ----ALLKLQKING----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ + +Q ++ +LE+ + +I E ++ Q ++ GIT D ++ A+
Sbjct: 74 QQVSSQINIQALSPSDFKQLEERVLDRMITEEVELQRAKQIGITVDEQRLDSALDGIAQR 133
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMK 171
G+S + + +QG N ++ + Q I ++ + + + + +I KQ M
Sbjct: 134 NGMSLDQLQQAVTRQGEDWNAYRDNIRKQIIIDELKRREVYERVDITDRDIDEYLKQYMG 193
Query: 172 NIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
T EY + +L S+P+N +Q K+ D + L+ +D K+ S D +
Sbjct: 194 ADTDTTEYHLAQILISVPENATPSQVENAKKRADDVMAALKAGQDFAKVSAERSDAPDAT 253
Query: 231 IG 232
G
Sbjct: 254 KG 255
>gi|217969876|ref|YP_002355110.1| SurA domain protein [Thauera sp. MZ1T]
gi|217507203|gb|ACK54214.1| SurA domain protein [Thauera sp. MZ1T]
Length = 438
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------KINGE--LEKIAVQE 79
+P+ S RI +N EVIT ++ RI + Q ++ E L++ ++
Sbjct: 23 LPVHSAPRAVEVDRIVAVVNNEVITGLELRARIEQTRRQLARQGAQLPPEEVLQRQLLER 82
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LIVE + Q +S + D T++ + A N LS + + L+K G+ + F+
Sbjct: 83 LIVERAQLQLARESSLRVDDVTLDRAIERIASNNKLSIDQLRATLEKDGVTWSRFR---- 138
Query: 140 IQSIWPDVVKNDFM---LKYGNLEMEIPANKQKMKNITV--------REYLIRTVLFSIP 188
D ++++ + L+ ++ I ++ N +E+ + +L P
Sbjct: 139 ------DEIRSEILLTRLREREVDSRIVVTDAEIDNFIANNPDAFSGQEFAVAHILLRTP 192
Query: 189 DNKLQNQGFVQKRIKDAEE--SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ- 245
+ Q V+ + AE+ +RLR +D ++ S D G + D P
Sbjct: 193 EGASPQQ--VEAVARRAEQVMARLRSGEDFARVAAEVSDAPDGLQGGSLGWRPLDRLPAL 250
Query: 246 FQNLLKKSQNNTTNPYV-TQKGVEYIAICDKRDLGGEIALK 285
F + +++ + T+P + + G+ + + D R GG A++
Sbjct: 251 FADAVRRMRPGETSPVLRSAAGLHIVRLVDARG-GGAAAVQ 290
>gi|315453271|ref|YP_004073541.1| hypothetical protein HFELIS_08670 [Helicobacter felis ATCC 49179]
gi|315132323|emb|CBY82951.1| putative periplasmic protein [Helicobacter felis ATCC 49179]
Length = 346
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 28/246 (11%)
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
AV LI++ ++ QEI++ I + + ++ AR+ G+ +DF L +GI +K
Sbjct: 121 AVNALILQRIQAQEIKRLKIDIEDDKIDAEIENIARHNGMDMQDFLRTLASEGINPTTYK 180
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRTVLFSIPDNKLQN 194
L Q ++++N + N +REY FS+P +
Sbjct: 181 AQLKKQLETRELLRNILLF-----------NTNTNSETKMREYYNAHKSEFSVPSEII-- 227
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
I+ + L K LE I V+ G+ + +++ L+PQ + +Q
Sbjct: 228 ------TIRYTAQDTQALTK---ALENRNLDIPGVTKGEEKINIKT-LNPQIAQMFLSTQ 277
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+T P + G +++ K +G E K +++ + + +K AEY +KLR
Sbjct: 278 EHTFTPILNAGGGNFVSFYIKEKIGKENVSFSQAKHFIANKLIEEQQDKILAEYYEKLRV 337
Query: 311 NAIIHY 316
A I +
Sbjct: 338 KAKIKF 343
>gi|148553334|ref|YP_001260916.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
gi|148498524|gb|ABQ66778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
Length = 446
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 42 IRTT---INGEVITDGDISKRIALLKLQKING------ELEKIAVQ---ELIVETLKKQE 89
IRT +NG +IT D+ +R+AL+ NG E E++ +Q LI ETL+ QE
Sbjct: 53 IRTATAIVNGTIITQTDVEQRLALVI--AANGGNIPDEERERLRLQVLRNLIDETLQIQE 110
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
+ V + + A N S ++F+ FL ++G K+ + ++ W
Sbjct: 111 ATAQKVEVSREEVQQTYDRVAANFRKSPKEFAEFLHEKGSSQASIKRQIEGEAAW 165
>gi|295689679|ref|YP_003593372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis
ATCC 21756]
gi|295431582|gb|ADG10754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis
ATCC 21756]
Length = 452
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 23/112 (20%)
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
C LE A K+ + G +DL P FQ K ++P T G+ IA+C
Sbjct: 350 CQTLETVAGKVDGLVAGDLGEAEITDLAPAFQEAASKLDIGQISDPIRTDAGLHLIAVCG 409
Query: 275 KRDLGGEIALKAYLSAQNTPT--KIEKH---------EAEYVKKLRSNAIIH 315
KR G N PT +IE Y++ LR+ A I
Sbjct: 410 KRQGGA-----------NAPTHDQIENRLRGQQLALISKRYLRDLRNQATIE 450
>gi|89094171|ref|ZP_01167114.1| peptidyl-prolyl cis-trans isomerase SurA [Oceanospirillum sp.
MED92]
gi|89081646|gb|EAR60875.1| peptidyl-prolyl cis-trans isomerase SurA [Oceanospirillum sp.
MED92]
Length = 430
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQ------KINGE--LEKIAVQELIVETLKKQEIEK 92
RI +N +I ++ +R ++ + Q +I E L K + LI+E+++KQ E+
Sbjct: 32 RIAAVVNEGIILQSELEQRTSITREQLQSRNTRIPPEHILRKQVLNRLIIESIQKQMAEQ 91
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-- 150
+G+ + +N A GLS + F L +G N ++ + + + V +N
Sbjct: 92 NGVRVSDSQLNGAIANIAAQNGLSIDQFREALIAEGRDYNQAREQIRNEMLINSVQQNLV 151
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ ++ E+ N + K+ E+L+ +L + P
Sbjct: 152 NRRIRVSEQELSNFLNSEDGKSQASAEFLLGHILIATP 189
>gi|57239486|ref|YP_180622.1| hypothetical protein Erum7600 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579465|ref|YP_197677.1| hypothetical protein ERWE_CDS_08010 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161565|emb|CAH58493.1| putative membrane protein [Ehrlichia ruminantium str. Welgevonden]
gi|58418091|emb|CAI27295.1| Hypothetical protein ERWE_CDS_08010 [Ehrlichia ruminantium str.
Welgevonden]
Length = 425
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKL-QKINGELEK 74
T L+IF Y S A ++ ++ +NGE+I+ D+ + IA+ K ++ ++ K
Sbjct: 30 TIGLFLLIFAF-----YCSNAFANVKMVAMVNGELISSLDLERYIAISKFFYHVDSDVAK 84
Query: 75 -IAVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSAE-DFSSFLDKQG 128
I + LI E + KQE EK + + VN FV N + DF S+ ++QG
Sbjct: 85 DIELDSLIDEYIWKQEAEKLKVVVSEQEILDAVNQLFVMKGSNHKENHNNDFKSYTEQQG 144
Query: 129 IGDNHFKQYLAIQSIWPDVV 148
+ + Q++ + +W ++
Sbjct: 145 LDYDMLIQHVKSKLLWNKIL 164
>gi|119383650|ref|YP_914706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
gi|119373417|gb|ABL69010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
Length = 423
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 48/105 (45%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+N V+T ++ +R+ L++ + A Q LI + L+ + GI ++
Sbjct: 35 VNDSVVTRYELDQRMRFLQILRAPDGDRASAEQALIDDRLRLFAARQMGIAASDAQIDAG 94
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ A + E+F+ L + G+ F+ ++A +W ++V+
Sbjct: 95 LAEFAGRANMDVEEFTRALAQAGVEQQTFRDFIAAGVVWRELVRQ 139
>gi|319796618|ref|YP_004158258.1| sura domain [Variovorax paradoxus EPS]
gi|315599081|gb|ADU40147.1| SurA domain [Variovorax paradoxus EPS]
Length = 469
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 13/247 (5%)
Query: 46 INGEVITDGDISKRIALL-----KLQKI-NGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+N E IT+ D+ R+ L +++ GEL ++ ++ LIVE + Q +++GI D
Sbjct: 69 VNSEPITNTDVQSRVTRLIKENPDAERVPRGELTRLVLERLIVERAQLQLAKENGIKVDD 128
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF--MLKYG 157
++ AR +S + + +GI F++ L Q + + + +K
Sbjct: 129 VAIDQAEQTVARQNEISLVELRRRVAAEGIALADFRKDLRDQLLLTRLRDREVESKVKIS 188
Query: 158 NLEMEIPANKQK---MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ E + Q+ KN ++ + VL +P+N Q ++ R R +
Sbjct: 189 DSEADEYLRDQRNSNTKNAALQNLNLAQVLVVLPENATDAQVAAAQKKAQGLAERARAGE 248
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
D KL + S D + G A + +D +P F + ++ + N P + G + +
Sbjct: 249 DFEKLVRENSDSPDRANGGAIGMRSADRYPPLFVDAVQSTAVNGIAGPVRSSAGFHVLKV 308
Query: 273 CDKRDLG 279
K +G
Sbjct: 309 LAKAQIG 315
>gi|283850614|ref|ZP_06367901.1| SurA domain protein [Desulfovibrio sp. FW1012B]
gi|283573857|gb|EFC21830.1| SurA domain protein [Desulfovibrio sp. FW1012B]
Length = 330
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 21 VLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRIALLKLQKING-------- 70
+ ++ ++ ++ +WA + ++ +NG++IT D++ R+A L LQ+ G
Sbjct: 7 ICLMLVLLVALTTTAWATQLVDKVVAVVNGKLITMFDVNARLADL-LQRTQGVSMRPDDP 65
Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
EL + ++ +I + L +QE + ++ ++ + + L+ + F + L+K+
Sbjct: 66 QAAELRRQVLESMINDILIEQEAARLKVSISETELDSQIDEIKKKNNLTQQQFVAELNKE 125
Query: 128 GIGDNHFKQYLAIQSI 143
G+ F++ + + S+
Sbjct: 126 GMTLKDFRERMRLDSV 141
>gi|94497694|ref|ZP_01304262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas sp.
SKA58]
gi|94422911|gb|EAT07944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas sp.
SKA58]
Length = 462
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 46 INGEVITDGDISKRIALLKLQKING------ELEKIAVQ---ELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ NG E E++ VQ LI ETL+ QE + I
Sbjct: 76 VNGRIITGTDVDQRLALII--TANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 133
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ + + A N S +F ++L QG K+ + + W +++ +
Sbjct: 134 IAPEEIEQSYQRVAANFRKSPTEFDAYLRSQGSSAASIKRQIEGELAWSRLLRRNI 189
>gi|149179628|ref|ZP_01858140.1| peptidyl-prolyl isomerase [Planctomyces maris DSM 8797]
gi|148841534|gb|EDL55985.1| peptidyl-prolyl isomerase [Planctomyces maris DSM 8797]
Length = 217
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 46 INGEVITDGDISKRIALL-----------KLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+NG VIT D+ +R+ALL +LQ++ ++ ++ LI ETL+ Q E
Sbjct: 61 VNGYVITGTDLDQRLALLVNANQTEIPAEELQRVRAQV----LRNLIDETLQIQAAEAEE 116
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
I V F + A ED ++L G K+ + + W
Sbjct: 117 IVISDAEVEQTFARVAAQNNQRPEDMENYLASIGSSSASLKRQIRGELAW 166
>gi|258513569|ref|YP_003189791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
acetoxidans DSM 771]
gi|257777274|gb|ACV61168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
acetoxidans DSM 771]
Length = 327
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLK-------LQKINGE--------LEKIAVQELIVE 83
++ + T+NGE IT + KR++++K QKI G+ ++ + E+I +
Sbjct: 21 NTNVVATVNGEEITQQQLDKRVSIVKDYYEKQYGQKIEGQDAQKLIDNMKPGLLDEMISD 80
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
TLK+QE K G + + + + E F +FL +Q + + L +Q +
Sbjct: 81 TLKRQEARKVGKDMTDQQIQE-KIDGVKKQFPNEEAFKNFLAQQDLTEKDMAYMLNLQDV 139
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI-PDN 190
V+K+ ++ NK++ K T +Y +R +L S PD+
Sbjct: 140 ---VLKDVKAPTEEEVQEYYDQNKEQFK--TAEQYEVRHILISTDPDD 182
>gi|121611714|ref|YP_999521.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
gi|121556354|gb|ABM60503.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
Length = 482
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE-------LEKIAVQELIVE 83
S WA I +N E +T+ ++ R+ + Q G L ++ LI+E
Sbjct: 69 SATGWA--DFIVAVVNSEPVTNNEVRSRLVRAEAQIARQGASMPSREWLAHEVLERLILE 126
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
++ Q+ +SGI D + AR G++ E F + L++ GIG F+ L
Sbjct: 127 RVQLQQARESGIRVDDFALAQAEQGVARQNGMTLEQFYARLERDGIGKERFRAEL 181
>gi|226942107|ref|YP_002797181.1| SurA [Laribacter hongkongensis HLHK9]
gi|226717034|gb|ACO76172.1| SurA [Laribacter hongkongensis HLHK9]
Length = 434
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 41 RIRTTINGEVITDGDISKRI----ALLKLQKI----NGELEKIAVQELIVETLKKQEIEK 92
RI +N + IT + R+ A L QK+ G L++ ++ +I E ++ Q
Sbjct: 35 RIVAVVNKQAITQQALDTRVREAEAQLTRQKVPLPPAGVLQQQMLERMINEEVQLQYAGN 94
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+GI DS ++ + A L+ E F + L GI + F+ L+ Q I + + +
Sbjct: 95 NGIALDSAELDRIMDRLAEQNRLTPEQFRARLKADGINEAAFRADLSRQVILDRLREREV 154
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K + E+ A + + E+ + +L ++P+
Sbjct: 155 DSKVNVSDSEVDAVLRSAVSANRTEFRLSHILITLPEQ 192
>gi|254476481|ref|ZP_05089867.1| ppic-type ppiase domain protein [Ruegeria sp. R11]
gi|214030724|gb|EEB71559.1| ppic-type ppiase domain protein [Ruegeria sp. R11]
Length = 421
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 56/119 (47%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
T+N V+T+ ++ +R L L + G+ + A ++LI + LK + + ++GI V
Sbjct: 50 TVNDSVVTNYELQQRARFLALLREPGDPLEKAREDLIEDRLKLEVLAQAGIDPTDEEVTA 109
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A LS ++F + L + G+ + + + W V + ++ + E EI
Sbjct: 110 GMTELAGRANLSLQEFLNVLRENGVDPQTLRDFSRVGIAWRGYVGSRYIGQARPSEEEI 168
>gi|303256196|ref|ZP_07342212.1| peptidyl-prolyl cis-trans isomerase SurA [Burkholderiales bacterium
1_1_47]
gi|331001252|ref|ZP_08324878.1| SurA protein [Parasutterella excrementihominis YIT 11859]
gi|302860925|gb|EFL84000.1| peptidyl-prolyl cis-trans isomerase SurA [Burkholderiales bacterium
1_1_47]
gi|329568979|gb|EGG50775.1| SurA protein [Parasutterella excrementihominis YIT 11859]
Length = 453
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Query: 41 RIRTTINGEVITDGDISKRI--ALLKLQKINGELEKI------AVQELIVETLKKQEIEK 92
RI +N +VIT+ + +RI L++ N L + + +I+E + +Q+
Sbjct: 49 RIAAVVNHDVITEIQLQQRIHQVATNLRRRNIPLPPMDNLRDQTLDRMILERIIEQKARD 108
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+GI D N +N Q A N GL+ L GI FK + + + + + D
Sbjct: 109 TGIRIDDNMLNGAIEQIATNNGLTVPQLEKKLAADGISVPSFKSEIRSELLTQRLRERDV 168
Query: 153 MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDN 190
K E EI + R EY + ++ S P+N
Sbjct: 169 DDKIQIPESEIDQYLKDQSGPGKRMEYRLSRIVISFPEN 207
>gi|149186120|ref|ZP_01864434.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Erythrobacter sp.
SD-21]
gi|148830151|gb|EDL48588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Erythrobacter sp.
SD-21]
Length = 448
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 15/112 (13%)
Query: 44 TTINGEVITDGDISKRIALL-----------KLQKINGELEKIAVQELIVETLKKQEIEK 92
+NG VIT D+ +R+ALL +LQ++ ++ ++ LI ETL+ Q E
Sbjct: 59 AVVNGYVITGTDLDQRLALLVNANQTEIPAEELQRVRAQV----LRNLIDETLQIQAAEA 114
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
I V F + A ED ++L G K+ + + W
Sbjct: 115 EEIVISDAEVEQTFARVAAQNNQRPEDMENYLASIGSSSASLKRQIRGELAW 166
>gi|85710398|ref|ZP_01041462.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1]
gi|85687576|gb|EAQ27581.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1]
Length = 448
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 33 YKSWAMSSRIRTTI-NGEVITDGDISKRIALL----KLQKINGELEKIAVQ---ELIVET 84
Y S + R T + NG VIT DI +R+AL+ +++ + E +++ VQ LI ET
Sbjct: 47 YGSENPNERAPTAVVNGFVITGTDIDQRVALVTNASEVEVSDAERQRLRVQVLRNLIDET 106
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQ-HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
LK Q I + V + Q A+N G + E +L G K+ + +
Sbjct: 107 LKIQAARAQEIGVERAEVEQTYQQLAAQNFGQNPERMDEYLASIGSSPAALKRQIEGEIA 166
Query: 144 WPDVVKNDF 152
W ++++ +
Sbjct: 167 WENLIRRNI 175
>gi|296532230|ref|ZP_06894978.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
gi|296267447|gb|EFH13324.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
Length = 401
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 99/258 (38%), Gaps = 25/258 (9%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIA------VQELIV-ETLKKQEIEKSG 94
I +NG+V+T G+++ R L L G + V L+V E L+ QE+++ G
Sbjct: 10 IVAVVNGDVVTAGEVAGRARLFALNAGMGPAPDVVQRLRPQVTRLLVDERLRMQEVQRRG 69
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-- 152
I V + GL L GI + Q W +V+
Sbjct: 70 IPVPDEDVAEAVQEIESRNGLPRGGLVGQLRAAGIPPRALFDQIRNQIGWSRLVRAQLGQ 129
Query: 153 --MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + + A+K + EYL+ + + D + + V++ ++D +L
Sbjct: 130 QAQISPAEVAEFVAAHKARTGQP---EYLVSEIFIPVDDPGAEPE--VRRFVEDV-VGQL 183
Query: 211 R----LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265
R P + + + + +G ++ + P ++L++ NP
Sbjct: 184 RRGVPFPAAATQFSQSQTALQGGDMG---WVRGEEFDPGVASILERMPPGAIANPQRVPG 240
Query: 266 GVEYIAICDKRDLGGEIA 283
G + +A+ KR+ G ++A
Sbjct: 241 GFQIVALRQKRETGRDLA 258
>gi|299531915|ref|ZP_07045315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
gi|298720090|gb|EFI61047.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
Length = 475
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKING------ELEKIAVQELIVETLKKQEIEKS 93
I +N E IT+ ++ R+ + + + G EL + ++ LIVE ++ QE + +
Sbjct: 72 IVAVVNSEPITNNEVRARMERVAQNVTEQGGQLPSQSELARQVLERLIVERVQLQEAKDT 131
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
GI D+ TV+ AR S L +GI + F+ + Q + V + D
Sbjct: 132 GINIDNMTVDQAVANVARQNNTDKAGLVSRLKAEGISEAQFRSEIRNQMLMQRVRERD 189
>gi|219870954|ref|YP_002475329.1| peptidyl-prolyl cis-trans isomerase SurA [Haemophilus parasuis
SH0165]
gi|219691158|gb|ACL32381.1| peptidyl-prolyl cis-trans isomerase SurA [Haemophilus parasuis
SH0165]
Length = 312
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 124/312 (39%), Gaps = 37/312 (11%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ ++ S R+ T++G I + + + +K N E + A E I++ Q
Sbjct: 15 ALFAFSSANAEERVVATVDGYPIMQSQVKQALG----KKANTEANRKAALETIIDDFVVQ 70
Query: 89 E-IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
I++SGI D V+ A G++ LD QGI + ++Q LA Q + V
Sbjct: 71 RAIKESGIKVDYAYVDQMMEDVAAQNGITYGQLLDALDYQGISLSQYRQQLAHQLLMEQV 130
Query: 148 ----VKNDFMLKYGNLE------MEIPANKQKMKNITVREYLIRTVLFSIPD--NKLQNQ 195
+ N + +++ ++ ++ ++ EY I +L N +Q +
Sbjct: 131 RQQSIGNSIQVDPKDVQSLAKDMLDKAKTNGTLETVSATEYRISHILIKTTPILNDMQAK 190
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI------GKAQYLLESDLHPQFQNL 249
+ D + ++ + A+KI+ V G + F N+
Sbjct: 191 AKLLSITADIKSGKITFEE--------AAKINSVDYISGIDGGDLGFNFLDAYDSTFANI 242
Query: 250 LKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYV 305
KS+ + ++P+ +Q G + + D R G+ AYL Q +++ +++
Sbjct: 243 ASKSKIDVISSPFKSQFGWHILKVTDTRR--GDRTEDAYLQKAYEQLIDKQVQVASKDWI 300
Query: 306 KKLRSNAIIHYY 317
K LRS I Y+
Sbjct: 301 KVLRSKLDIKYF 312
>gi|104779703|ref|YP_606201.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas entomophila L48]
gi|95108690|emb|CAK13384.1| putative peptidyl-prolyl cis-trans isomerase A [Pseudomonas
entomophila L48]
Length = 439
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 12/219 (5%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G LE+ ++ LIVE L+ Q E+SGI +N A+ G+S E F + L G+
Sbjct: 69 GALEQQVLERLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNGMSLEQFRAALAHDGL 128
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSI 187
+ ++ + + I V + + E E+ N K EY + +L
Sbjct: 129 SYDDAREQIKREMIISRVRQRRVAERIQVSEQEVKNFLNSDLGKMQLSEEYRLANILIPT 188
Query: 188 PDNKLQNQGFVQKRIKDAEE--SRLRLPKDCNKL--EKFASKIHDVSIGKAQYLLESDLH 243
P++ N +Q + A + +L+ D +L + AS+ + + G+ + L
Sbjct: 189 PESA--NSDAIQAAARQAGDVYQQLKQGADFARLAIARSASE-NALEGGEMGWRKAGQLP 245
Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
P F +L + + T P G + + +KR GGE
Sbjct: 246 PDFAKMLSSMATGDVTQPIRIPNGFIILKLEEKR--GGE 282
>gi|264680840|ref|YP_003280750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
gi|262211356|gb|ACY35454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
Length = 475
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKING------ELEKIAVQELIVETLKKQEIEKS 93
I +N E IT+ ++ R+ + + + G EL + ++ LIVE ++ QE + +
Sbjct: 72 IVAVVNSEPITNNEVRARMERVAQNVTEQGGQLPSQSELARQVLERLIVERVQLQEAKDT 131
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
GI D+ TV+ AR S L +GI + F+ + Q + V + D
Sbjct: 132 GINIDNMTVDQAVANVARQNNTDKAGLVSRLKAEGISEAQFRSEIRNQMLMQRVRERD 189
>gi|224373789|ref|YP_002608161.1| putative periplasmic protein [Nautilia profundicola AmH]
gi|223588950|gb|ACM92686.1| putative periplasmic protein [Nautilia profundicola AmH]
Length = 270
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+F + I+S S + +I T+N IT ++ K + LK+ K A+Q L+
Sbjct: 4 ILFVLSLIISLHSEVID-KIIATVNNIPITSYEVDKLASSLKISKDK------ALQYLLD 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ L + EI+K GI D + + A+ GLS +F + L ++G
Sbjct: 57 QKLIQSEIQKRGIDVDDFEIENAMEKIAKQNGLSLFEFKNILMQKG 102
>gi|221069847|ref|ZP_03545952.1| SurA domain protein [Comamonas testosteroni KF-1]
gi|220714870|gb|EED70238.1| SurA domain protein [Comamonas testosteroni KF-1]
Length = 475
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 42 IRTTINGEVITDGDISKRIALLK--LQKING------ELEKIAVQELIVETLKKQEIEKS 93
I +N E IT+ ++ R+A + + + G EL + ++ LIVE ++ QE +
Sbjct: 72 IVAVVNSEPITNNEVRARMARVAQNVTEQGGQLPSQSELARQVLERLIVERVQLQEARDT 131
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
GI D+ V+ AR S L +GI + F+ + Q + V + D
Sbjct: 132 GINVDNLAVDQAVANVARQNSTDRAGLVSRLKAEGISEAQFRAEIRSQMLMQRVRERD 189
>gi|99035882|ref|ZP_01314934.1| hypothetical protein Wendoof_01000229 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 413
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 37 AMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEKIAV-QELIVETLKKQEIE 91
A I +NGE I++ DI KRI +L Q +N + K V +ELI E + E +
Sbjct: 50 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIIIINEAQ 109
Query: 92 KSGITFDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ I + N + F Q + L A + +++K I ++ + Q +W +
Sbjct: 110 RLNIKLSNEELDNAIMLFLTQSFK---LKANEVDQYIEKHNIDLGILRKQIKCQLLWSKI 166
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN-----QGFVQK-R 201
++ + + E+ K++ + +YLI F IPD K ++ + V+K R
Sbjct: 167 IEVRIVPFINISDKEVDDVKRQTEK---PDYLITFQEFIIPDQKDKDVYGIAEDLVKKLR 223
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
D ES +++ K L + K+ V G
Sbjct: 224 NSDNPESPIKMRKATVNLSQLKGKLKSVLEG 254
>gi|77165200|ref|YP_343725.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani
ATCC 19707]
gi|254434050|ref|ZP_05047558.1| SurA N-terminal domain family [Nitrosococcus oceani AFC27]
gi|122070652|sp|Q3JAF1|SURA_NITOC RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|76883514|gb|ABA58195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani
ATCC 19707]
gi|207090383|gb|EDZ67654.1| SurA N-terminal domain family [Nitrosococcus oceani AFC27]
Length = 426
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE- 71
++L T FVL PI S+ + + RI +N +++ + ++ + + ++ Q G
Sbjct: 3 RVLVTIFVLFW----PIGSFAAINLD-RIVAVVNEDIVLESELEQMVRTVQDQLAAQGTS 57
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
LE+ ++ L++E L+ Q ++GI T+N + A++ GL+ F + L+
Sbjct: 58 LPPGYVLERQVLERLVMEQLQLQLAARTGIQVGDETLNEALGRIAQDNGLTLSQFRNVLE 117
Query: 126 KQG 128
+ G
Sbjct: 118 QDG 120
>gi|167854677|ref|ZP_02477457.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
adenyltransferase [Haemophilus parasuis 29755]
gi|167854214|gb|EDS25448.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
adenyltransferase [Haemophilus parasuis 29755]
Length = 312
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 122/316 (38%), Gaps = 45/316 (14%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ ++ S R+ T++G I + + + +K N E + A E I++ Q
Sbjct: 15 ALFAFSSANAEERVVATVDGYPIMQSQVKQALG----KKANTEANRKAALETIIDDFVVQ 70
Query: 89 E-IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
I++SGI D V+ A G++ LD QGI + ++Q LA Q + V
Sbjct: 71 RAIKESGIKVDYAYVDQMMEDVAAQNGITYGQLLDALDYQGISLSQYRQQLAHQLLMEQV 130
Query: 148 VKNDFMLKYGNLEMEIPANKQK--------------MKNITVREYLIRTVLFSIPD--NK 191
+ GN P + Q ++ ++ EY I +L N
Sbjct: 131 RQQSI----GNSIQVDPKDVQSLAKDMLDKAKINGTLETVSATEYRISHILIKTTPILND 186
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI------GKAQYLLESDLHPQ 245
+Q + + D + ++ + A+KI+ V G +
Sbjct: 187 MQAKAKLLSITADIKSGKITFEE--------AAKINSVDYISGIDGGDLGFNFLDAYDST 238
Query: 246 FQNLLKKSQNNT-TNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHE 301
F N+ KS+ + ++P+ +Q G + + D R G+ AYL Q +++
Sbjct: 239 FANIASKSKIDVISSPFKSQFGWHILKVTDTRR--GDRTEDAYLQRAYEQLIDKQVQVAS 296
Query: 302 AEYVKKLRSNAIIHYY 317
+++K LRS I Y+
Sbjct: 297 KDWIKVLRSKLDIKYF 312
>gi|254362982|ref|ZP_04979046.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
gi|153094638|gb|EDN75442.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
Length = 314
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 134/327 (40%), Gaps = 39/327 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ + F + + + ++ + A R+ +N I + + +L +K
Sbjct: 1 MKLVKSLFAVAVATMS--LTQTAHAFEERVVALVNDTPIMQSQVQR---VLGKKKATETA 55
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ A+ ++I + L +Q ++++G+ VN A G++ LD QGI
Sbjct: 56 QRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITYGQLLDALDYQGITLE 115
Query: 133 HFK----QYLAIQSIWPDVVKNDFML---KYGNLEMEIPANKQ---KMKNITVREYLIRT 182
FK Q +A++ + + + + L E+ A + K+K ++ +E+ I
Sbjct: 116 QFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDKAAGKLKTVSGKEHRISH 175
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+L N + N + ++ S L + K+ + A+K H S+ A D
Sbjct: 176 ILLKT--NPILNDAQAKAKL-----SSLTTDINSGKISFEEAAKTH--SVDYASGADGGD 226
Query: 242 L--------HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS--- 289
L P F N+ K N + P+ +Q G + + D R+ G+ AY
Sbjct: 227 LGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRN--GDRTEDAYHQRAY 284
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Q + E+ ++VK LR A I Y
Sbjct: 285 QQLVNKQAEEASKDWVKALRKTANIQY 311
>gi|37678664|ref|NP_933273.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016]
gi|37197404|dbj|BAC93244.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016]
Length = 443
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+ F++
Sbjct: 85 VDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYEEFRE 144
Query: 137 YL 138
+
Sbjct: 145 QI 146
>gi|121956507|sp|Q7MP84|SURA_VIBVY RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 428
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+ F++
Sbjct: 70 VDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYEEFRE 129
Query: 137 YL 138
+
Sbjct: 130 QI 131
>gi|237803361|ref|ZP_04590946.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331025342|gb|EGI05398.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 440
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 17/243 (6%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+K + LI+E L+ Q E+SGI + +N A+ +S E F + L G+
Sbjct: 71 LQKQVLDRLILENLQLQMGERSGIRVSDDELNQAIASIAQRNNMSVEQFRAALIHDGVSY 130
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIP 188
+ ++ + + I V + + E E+ A+ Q ++ E+ + +L + P
Sbjct: 131 DDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLS-EEFHLANILIATP 189
Query: 189 DNK----LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLH 243
D+ +Q K I D + + D KL S + + G + + L
Sbjct: 190 DSASSDVIQAAALKAKSIYD----QAKKGADFAKLAATTSSSENALEGGDMGWRKAAQLP 245
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN---TPTKIEK 299
P F ++L + T P T G + + +KR G+ ++ + ++ P++I
Sbjct: 246 PPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHILIKPSEIRS 305
Query: 300 HEA 302
EA
Sbjct: 306 EEA 308
>gi|122070641|sp|Q145L3|SURA_BURXL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 450
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 16/250 (6%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKING------ELEKIAVQELIVETLKKQEIEKS 93
I +N VIT ++ +R+ L+ +L + N +L + + ++++E ++ Q+ ++
Sbjct: 41 IAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMDQLRQQVLNQMVLERIQLQKAKED 100
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAIQSIWPDVVK 149
GIT D TV + A L+ + + S ++ QG+ F + L + + V
Sbjct: 101 GITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREKEVD 160
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + + I + + +T +L + + P N + +R A +
Sbjct: 161 SKVTVSDAEVANYIASQRGPNAGLTSDLHL-QHIFLKAPLNASETDIEAAQRKAQALLAE 219
Query: 210 LRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV--TQKG 266
+ + KL K S+ D S G ++ S L P+F + NP + T G
Sbjct: 220 AKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDG 279
Query: 267 VEYIAICDKR 276
E + + D+R
Sbjct: 280 FEIVRLVDRR 289
>gi|261493819|ref|ZP_05990333.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495044|ref|ZP_05991511.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309286|gb|EEY10522.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261310522|gb|EEY11711.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 314
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 134/327 (40%), Gaps = 39/327 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ + F + + + ++ + A R+ +N I + + +L +K
Sbjct: 1 MKLVKSLFAVAVATMS--LTQTAHAFEERVVALVNDTPIMQSQVQR---VLGKKKATETA 55
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ A+ ++I + L +Q ++++G+ VN A G++ LD QGI
Sbjct: 56 QRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITYGQLLDALDYQGITLE 115
Query: 133 HFK----QYLAIQSIWPDVVKNDFML---KYGNLEMEIPANKQ---KMKNITVREYLIRT 182
FK Q +A++ + + + + L E+ A + K+K ++ +E+ I
Sbjct: 116 QFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDKAAGKLKTVSGKEHRISH 175
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+L N + N + ++ S L + K+ + A+K H S+ A D
Sbjct: 176 ILLKT--NPILNDAQAKAKL-----SSLTADINSGKISFEEAAKAH--SVDYASGTDGGD 226
Query: 242 L--------HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS--- 289
L P F N+ K N + P+ +Q G + + D R+ G+ AY
Sbjct: 227 LGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRN--GDRTEDAYHQRAY 284
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Q + E+ ++VK LR A I Y
Sbjct: 285 QQLVNKQAEEASKDWVKALRKTANIQY 311
>gi|91781822|ref|YP_557028.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
xenovorans LB400]
gi|91685776|gb|ABE28976.1| Putative peptidyl-prolyl cis-trans isomerase [Burkholderia
xenovorans LB400]
Length = 453
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 16/250 (6%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKING------ELEKIAVQELIVETLKKQEIEKS 93
I +N VIT ++ +R+ L+ +L + N +L + + ++++E ++ Q+ ++
Sbjct: 44 IAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMDQLRQQVLNQMVLERIQLQKAKED 103
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAIQSIWPDVVK 149
GIT D TV + A L+ + + S ++ QG+ F + L + + V
Sbjct: 104 GITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVPWTTFTSDARTELTLSRLREKEVD 163
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + + I + + +T +L + + P N + +R A +
Sbjct: 164 SKVTVSDAEVANYIASQRGPNAGLTSDLHL-QHIFLKAPLNASETDIEAAQRKAQALLAE 222
Query: 210 LRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV--TQKG 266
+ + KL K S+ D S G ++ S L P+F + NP + T G
Sbjct: 223 AKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEFVKAASALRPGEVNPDLIRTSDG 282
Query: 267 VEYIAICDKR 276
E + + D+R
Sbjct: 283 FEIVRLVDRR 292
>gi|291279787|ref|YP_003496622.1| hypothetical protein DEFDS_1405 [Deferribacter desulfuricans SSM1]
gi|290754489|dbj|BAI80866.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 512
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI---AVQELIVET 84
V + Y++ A + R++ ++ I DG SK+ KL + N +KI A E+IVE
Sbjct: 397 VSLKVYENLAENVRLKNSVCRSAIIDGSFSKKEYFDKLDEKNINYKKILFTAPDEIIVER 456
Query: 85 LKKQEIEKS 93
LKK+E +KS
Sbjct: 457 LKKRESKKS 465
>gi|42521061|ref|NP_966976.1| hypothetical protein WD1266 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410802|gb|AAS14910.1| hypothetical protein WD_1266 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 399
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 37 AMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEKIAV-QELIVETLKKQEIE 91
A I +NGE I++ DI KRI +L Q +N + K V +ELI E + E +
Sbjct: 36 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIIIINEAQ 95
Query: 92 KSGITFDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ I + N + F Q + L A + +++K I ++ + Q +W +
Sbjct: 96 RLNIKLSNEELDNAIMLFLTQSFK---LKANEVDQYIEKHNIDLGILRKQIKCQLLWGKI 152
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN-----QGFVQK-R 201
++ + + E+ K++ + +YLI F IPD K ++ + V+K R
Sbjct: 153 IEVRIVPFINISDKEVDDVKRQTEK---PDYLITFQEFIIPDQKDKDVYGIAEDLVKKLR 209
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
D ES +++ K L + K+ V G
Sbjct: 210 NSDNPESPIKMRKATVNLSQLKGKLKSVLEG 240
>gi|292490958|ref|YP_003526397.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
halophilus Nc4]
gi|291579553|gb|ADE14010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
halophilus Nc4]
Length = 250
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
I+ EVIT A LK K+ G E++ ++E++ + LK ++ G++ ++ +
Sbjct: 7 IDDEVITAD------AFLKTLKLTGRFEEL-IEEMVRDKLKVHAAKRQGVSLTTDEIQER 59
Query: 106 FVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYL 138
Q R GL A+D + FLD G+ + F+ ++
Sbjct: 60 ADQFRRVYGLHRAKDMNQFLDAIGVSLDDFENFI 93
>gi|326423746|ref|NP_759646.2| survival protein SurA [Vibrio vulnificus CMCP6]
gi|121956501|sp|Q8DED4|SURA_VIBVU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|319999108|gb|AAO09173.2| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Vibrio vulnificus CMCP6]
Length = 428
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+ F++
Sbjct: 70 VDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYAEFRE 129
Query: 137 YL 138
+
Sbjct: 130 QI 131
>gi|320157503|ref|YP_004189882.1| survival protein SurA (Peptidyl-prolyl cis-trans isomerase SurA)
[Vibrio vulnificus MO6-24/O]
gi|319932815|gb|ADV87679.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase SurA) [Vibrio vulnificus MO6-24/O]
Length = 432
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+ F++
Sbjct: 74 VDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYAEFRE 133
Query: 137 YL 138
+
Sbjct: 134 QI 135
>gi|260767121|ref|ZP_05876066.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio furnissii CIP
102972]
gi|260617876|gb|EEX43050.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio furnissii CIP
102972]
gi|315181264|gb|ADT88178.1| survival protein SurA [Vibrio furnissii NCTC 11218]
Length = 431
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------ 71
T L+ + +V + M R+ +N VI DI ALL + K N +
Sbjct: 7 TLLTLLGLMSIGLVQAQPVEMD-RVAVIVNNGVILQSDID--TALLSV-KANAKKNNRAL 62
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + V++LI++TL++QE E+ G+ D N +N A+ +AE +
Sbjct: 63 PDEAVLREQVVEKLIIDTLQQQEAERIGVRIDDNRLNEAINDIAKENHQTAEQLRVSVAA 122
Query: 127 QGIGDNHFKQYL 138
+G+ F++ +
Sbjct: 123 EGLTYPEFREQI 134
>gi|165975861|ref|YP_001651454.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165875962|gb|ABY69010.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 316
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A+ R+ ++G + + + + + +K N E
Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQRALG----KKANSEA 56
Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K A++++I + L ++ ++++GI + V+ A G++ LD QGI
Sbjct: 57 NHKAALEQIIDDLLVQKAVKEAGIKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITL 116
Query: 132 NHFKQYLAIQ 141
++Q +A Q
Sbjct: 117 EQYRQQIAQQ 126
>gi|262172454|ref|ZP_06040132.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus MB-451]
gi|261893530|gb|EEY39516.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus MB-451]
Length = 431
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------Q 66
+KL + +I + ++ + +N VI D+ + +K Q
Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPQQLDSVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60
Query: 67 KINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ E L + +++LI++TL++QE E+ G+ D N +N + A+N + E S +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120
Query: 125 DKQGIGDNHFKQYL 138
++G+ F++ +
Sbjct: 121 AQEGLTYPEFREQV 134
>gi|85374605|ref|YP_458667.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594]
gi|84787688|gb|ABC63870.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594]
Length = 473
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 46 INGEVITDGDISKRIALLKLQKINGEL---EKIAV-----QELIVETLKKQEIEKSGITF 97
+NG VIT DI R AL+ + GEL E + V + LI ETL+ QE I
Sbjct: 86 VNGSVITGTDIDHRTALV-VASAQGELAEEEMVRVRMQVLRNLIDETLQVQEAAAQEINI 144
Query: 98 DSNTVNYFFVQ-HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
++ VN + Q A+N G + ++L G K+ + + W +++ +
Sbjct: 145 TADEVNQRYAQLAAQNFGNQPDAMDAYLLSIGSSPASLKRQIQGELAWQRLLRRNI 200
Searching..................................................done
Results from round 2
>gi|254780396|ref|YP_003064809.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040073|gb|ACT56869.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter asiaticus str. psy62]
Length = 317
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI
Sbjct: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF
Sbjct: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI
Sbjct: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES
Sbjct: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH
Sbjct: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
Query: 301 EAEYVKKLRSNAIIHYY 317
EAEYVKKLRSNAIIHYY
Sbjct: 301 EAEYVKKLRSNAIIHYY 317
>gi|319408317|emb|CBI81970.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 308
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 11/305 (3%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+L + S + + T+NG IT+ DI +RIA LKLQ+ G+L A EL
Sbjct: 1 MLGVSSFTGAFFISSVFAQTTVAITVNGNPITNYDIQRRIAFLKLQQKQGDLSAQARNEL 60
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E LK EI++ I N +N F A ++ + S L++ + + HFK Y++
Sbjct: 61 IDEMLKNIEIQRLNIDVSDNEINSAFANFAEQNNMTVDQLSEMLNQTEVTEEHFKAYISG 120
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
Q W +V + + G L + A+ K + EY ++ ++F IP ++
Sbjct: 121 QMGWGRLVNARYQSEDGYLSEQEAAHRILKNGGIKPSTNEYTLQQIIFVIPAHR--RAEL 178
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
+ KR ++ R + C+ +K I DV++ LE L ++ ++ +
Sbjct: 179 LTKRTQEINNFRAHF-RGCDNTKKQTRGILDVTVRNLGKFLEPQLPTDWEQAIRATPAGK 237
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT----PTKIEKHEAEYVKKLRSNA 312
T P+ T G+E +A+C + + + + S Q++ P K+E +Y+K+LR A
Sbjct: 238 MTQPHETPYGIEALAVCQIKKVSDDRVAQLMFSIQDSQKRTPQKLEALSEKYLKELRQRA 297
Query: 313 IIHYY 317
I +
Sbjct: 298 HIQNH 302
>gi|85716332|ref|ZP_01047305.1| hypothetical protein NB311A_19130 [Nitrobacter sp. Nb-311A]
gi|85696848|gb|EAQ34733.1| hypothetical protein NB311A_19130 [Nitrobacter sp. Nb-311A]
Length = 319
Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 8/308 (2%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + L +F + VS+ S + + +NGE IT DI +R L+K+
Sbjct: 5 SLFRPFSRLAVFAFLSFVSFNSPLSAQSVAVMVNGEPITTFDIEQRSRLIKISTHKSASR 64
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + ELI E +K +E +K G+ S ++ + G+S E + L QG+ +
Sbjct: 65 QEVIDELIGEKVKIKEAKKFGVNPTSADIDRAYANMGARMGMSPEQLTKSLASQGVRPDT 124
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFSIPD 189
K L +W +V+ F + ++ + + I EY +R V+ +P
Sbjct: 125 IKARLRADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVLIVPR 184
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ ++ R +A R R+ + C + + + ++ +DL P ++L
Sbjct: 185 GAAAS--VMEARRNEANSLRERV-QSCADAIRIVKAMRNATLRDRVTKTSADLPPPLRDL 241
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
L K+ + T P +T++G+E +A+C+K+ + K + + K EK Y++ +
Sbjct: 242 LDKTPVGHLTPPEITRQGIEMVAVCEKKVTSVDTPKKREIREKMFADKYEKRSKSYLENI 301
Query: 309 RSNAIIHY 316
R +A+I Y
Sbjct: 302 RRSAMIEY 309
>gi|90423813|ref|YP_532183.1| hypothetical protein RPC_2310 [Rhodopseudomonas palustris BisB18]
gi|90105827|gb|ABD87864.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 320
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 12/304 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L ++ C+ P + + + +NGE IT+ DI +R L+ L +
Sbjct: 25 LCCAVAMLAICLGPDL------HAQSVAVMVNGEPITNYDIEQRSKLMALSTHKSPSRQQ 78
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ ELI E +K +E +K GI ++ F +SAE + L+ QGI K
Sbjct: 79 VIDELINEKVKIREGKKFGIDPSVADIDGSFAGMGSRMRMSAEQLTKSLEGQGIRPETLK 138
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQ 193
Q + + +W +V+ F E E+ A EY +R ++ +P N
Sbjct: 139 QRMRAEMVWTSLVRGRFKDSLLVGEKEVRAALGGDDKSSGESFEYQMRPIVLIVPRNAAP 198
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ + R+K+AE R R+ + C + + + + +I +D+ + +L K+
Sbjct: 199 S--ARELRMKEAEALRSRV-QSCAEADDLFKSMQNAAIRDTVTKTSADIPGVLREVLDKT 255
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T P VT++GVE +A+C ++ + K + + K E Y++ +R A
Sbjct: 256 PIGHLTAPEVTKQGVEMVALCSRKPTTADTPKKREIRDKMFADKFEAKSKSYLRDVRKAA 315
Query: 313 IIHY 316
+I Y
Sbjct: 316 MIEY 319
>gi|49474098|ref|YP_032140.1| hypothetical protein BQ04600 [Bartonella quintana str. Toulouse]
gi|49239602|emb|CAF25959.1| hypothetical protein BQ04600 [Bartonella quintana str. Toulouse]
Length = 324
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 11/312 (3%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L + + +V + I T+NG IT+ DI +R A LKLQ+ G
Sbjct: 13 RILALFCIAPLSVSNLLVSGFLISPVFAQTVIVVTVNGNPITNYDIQRRTAFLKLQQKQG 72
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A ELI E +K EI++ I N V F A ++ + + L + I
Sbjct: 73 NLAAQAKNELINEIVKNTEIKRRNIEVSDNEVESAFENFAMQNNMTVDQLNQILMQNDIT 132
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSI 187
HFK Y+ Q W +V + + G + + K + EY ++ ++F I
Sbjct: 133 VQHFKDYIRGQIGWGRLVNARYQAEIGMVSEQEAVRRILKNGGVKPSTNEYTLQQIIFVI 192
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
P+++ +++R ++A+ R + C +K A I DV+I LE L ++
Sbjct: 193 PEHR--RSEILERRQREAKSFRAHF-QGCANAQKQARGILDVTIRHLGKFLEPQLPREWG 249
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEA 302
++ + T T G+E +A+C + + + + S Q+ +P K+E
Sbjct: 250 QAVRATPVGKMTQLRETTDGIEALAVCKIKRVSDDYVARLIFSLQDNKEKSPQKLEILSE 309
Query: 303 EYVKKLRSNAII 314
+Y+K+LR A I
Sbjct: 310 KYLKELRQAAHI 321
>gi|316933705|ref|YP_004108687.1| SurA domain [Rhodopseudomonas palustris DX-1]
gi|315601419|gb|ADU43954.1| SurA domain [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats.
Identities = 71/308 (23%), Positives = 137/308 (44%), Gaps = 9/308 (2%)
Query: 14 KLLTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
KL L++ C + + + I +NGE IT+ DI +R L ++ N E
Sbjct: 4 KLSLRIIGLVLCCAAATLGLGTGPSQAQSIVVMVNGEPITNFDIEQRSKLNRMSHKN-ES 62
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ + +LI E +K +E +K G+ + ++ F A +S ++ L QGI +
Sbjct: 63 RQQVLDDLIDEKVKIKEGKKYGVNPSDSDIDSSFATMASRMRMSTAQMTNMLAAQGIRPD 122
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK---QKMKNITVREYLIRTVLFSIPD 189
K + + +W +V+ F E EI A K + EY +R ++ +
Sbjct: 123 TLKSRIKAEMVWGSLVRGRFKDSLQVSEREIQAQLKGNDDSKAVESYEYQLRPIVMIVSR 182
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + R K+AE+ R R+ C + ++ + + +I +DL P +++
Sbjct: 183 GSGSSS--LDTRRKEAEQIRGRI-TSCAEADRIFKAMPNAAIRGTVVKTSADLPPALRDV 239
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
L K+ + T P VT++GVE +A+C ++ + K + + K +Y++++
Sbjct: 240 LDKTPVGHLTAPEVTKQGVEMVALCGRKQSTADTPRKREIREKLFGEKFLAKSKDYLQEV 299
Query: 309 RSNAIIHY 316
R A+I Y
Sbjct: 300 RKAAMIEY 307
>gi|315122192|ref|YP_004062681.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495594|gb|ADR52193.1| peptidyl-prolyl cis-trans isomerase protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 315
Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats.
Identities = 184/312 (58%), Positives = 241/312 (77%), Gaps = 5/312 (1%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
+S + F KLL VL I C P Y+S A+SS+I T+NGE ITDGDISKRIA LKL+
Sbjct: 7 SSFNGFSKLLAVCVVL-IACFYP---YESSAISSQISITVNGEAITDGDISKRIAFLKLR 62
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
KING+L+KIA QELI E LKKQE E GI + N++NYFF Q+ARNTG+SAE+FS L+
Sbjct: 63 KINGDLKKIAKQELIAEALKKQESEGFGIILNPNSMNYFFAQYARNTGISAEEFSDMLEH 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF 185
GIG+NHFKQYLAIQ W ++V+N F++KY L ME+P + K + KN+TVREYL++ ++F
Sbjct: 123 LGIGENHFKQYLAIQLAWDEIVRNTFIMKYRGLGMEMPPSIKGRGKNLTVREYLVKKIIF 182
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
S+P NK +N+ F+QKRI +AE+SR P +CN++E+FAS +HDVS+ QY LESDL PQ
Sbjct: 183 SVPYNKHKNEDFIQKRIDEAEKSRFHFPTNCNRVEEFASAMHDVSVSNPQYFLESDLQPQ 242
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ LLKK++NNTTN YVT+KGVEYIAIC+ RD+GGE+ALKAY + Q P K++K++ EY+
Sbjct: 243 LKILLKKTKNNTTNTYVTEKGVEYIAICNIRDIGGELALKAYFNTQEIPKKMKKYDEEYM 302
Query: 306 KKLRSNAIIHYY 317
K LR+NAII +Y
Sbjct: 303 KTLRANAIIQFY 314
>gi|319898728|ref|YP_004158821.1| Peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
gi|319402692|emb|CBI76238.1| Peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
Length = 319
Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 23/315 (7%)
Query: 20 FVLIIFCIVP----------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
VL +FCI + + +A +S + T+NG IT DI +RIA LKLQ+
Sbjct: 7 SVLALFCITSLSVSSLSVSTFFTSQVFAQTS-VVVTVNGNPITSYDIQRRIAFLKLQQKQ 65
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G L A ELI E LK EI++ I + V F A ++ + + L + +
Sbjct: 66 GNLAAQAKNELIDEALKNNEIKRRNIEVSKDEVESAFKNFALQNNMTVDQLNQMLAQTDV 125
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFS 186
HFK Y+ Q W +V + + G L + A+ K + EY ++ ++F
Sbjct: 126 TVEHFKTYILGQMGWGRLVNARYQAEGGVLTEQETAHRILKNGGVKPSTNEYTLQRIIFV 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KR K+A + R C+ + A I DV+I LE L +
Sbjct: 186 IPEHR--RSAILEKRKKEANKFRANF-HGCHNAQNQAKSILDVTIRHLGKFLEPQLPQNW 242
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKH 300
+ +L TN TQ G+E +AIC + + + + S Q + P +E
Sbjct: 243 EKAILATPAGKMTNFQETQYGIEALAICQIKRVSDDRVARLIFSIQDHQKKDIPQLLEAL 302
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 303 SEKYLKELRQTAHIQ 317
>gi|161618653|ref|YP_001592540.1| chaperone surA precursor [Brucella canis ATCC 23365]
gi|260566737|ref|ZP_05837207.1| SurA domain-containing protein [Brucella suis bv. 4 str. 40]
gi|161335464|gb|ABX61769.1| Chaperone surA precursor [Brucella canis ATCC 23365]
gi|260156255|gb|EEW91335.1| SurA domain-containing protein [Brucella suis bv. 4 str. 40]
Length = 318
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVTAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|121602042|ref|YP_988820.1| SurA domain-containing protein [Bartonella bacilliformis KC583]
gi|120614219|gb|ABM44820.1| SurA domain protein [Bartonella bacilliformis KC583]
Length = 325
Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 12/314 (3%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ F+ L T F+ + + ++S +A +++ T+NG IT+ DI +RIA LKLQ+
Sbjct: 12 NHFLTLFFTAFLGVSSLFINVLSISPVFAQQTKVALTVNGNAITNYDIQRRIAFLKLQQK 71
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L A ELI E LKK EI++ I + V+ F A ++ S L +
Sbjct: 72 KENLSVQAKNELIDEMLKKIEIKQRNIDVSDSEVDAAFENFAVQNHMTINQLSEMLTQTN 131
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLF 185
+ HFK Y+ Q W +V + + G L + A+ K + + EY ++ ++F
Sbjct: 132 VTVKHFKDYIRGQIGWGRLVNARYQAEGGLLTEQEVAHKILKNGGQKPSTDEYTLQRIIF 191
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
IP ++ +QKR ++A R CN I DV+I + +LE L
Sbjct: 192 VIPAHR--RSEILQKRTQEANSFREHF-NGCNNTRAQVKGILDVTIRSSVKILEPQLPQD 248
Query: 246 FQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL----SAQNTPTKIEKH 300
++ +L+ T T G+E A+C + + + + S ++ P ++E
Sbjct: 249 WKKFILETPAGKMTQVQETPNGIEAFAVCQIKRVSDDRVAQLLFSIQHSQEDIPQELETL 308
Query: 301 EAEYVKKLRSNAII 314
+Y+K+L+ A I
Sbjct: 309 SEKYLKELQQAAHI 322
>gi|254718820|ref|ZP_05180631.1| Chaperone surA precursor [Brucella sp. 83/13]
gi|265983805|ref|ZP_06096540.1| SurA domain-containing protein [Brucella sp. 83/13]
gi|264662397|gb|EEZ32658.1| SurA domain-containing protein [Brucella sp. 83/13]
Length = 318
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASLLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|256044377|ref|ZP_05447281.1| survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase surA) [Brucella melitensis bv. 1 str. Rev.1]
gi|260563729|ref|ZP_05834215.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|260153745|gb|EEW88837.1| SurA domain-containing protein [Brucella melitensis bv. 1 str. 16M]
Length = 318
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI VN + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSLGINISDKEVNDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|306838742|ref|ZP_07471576.1| Chaperone surA precursor [Brucella sp. NF 2653]
gi|306406144|gb|EFM62389.1| Chaperone surA precursor [Brucella sp. NF 2653]
Length = 317
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 2 FARPLIASLLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 62 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 121
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 122 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 181
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 182 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 239
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 240 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 299
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 300 LSKKYVQELREKATI 314
>gi|17987548|ref|NP_540182.1| survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase surA) [Brucella melitensis bv. 1 str. 16M]
gi|265990795|ref|ZP_06103352.1| SurA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17983251|gb|AAL52446.1| survival protein sura precursor (peptidyl-prolyl cis-trans
isomerase sura) [Brucella melitensis bv. 1 str. 16M]
gi|263001579|gb|EEZ14154.1| SurA domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 317
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 2 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI VN + A ++ + +++ G
Sbjct: 62 SGNLNQLARNELTEEMLKRIEMKSLGINISDKEVNDAYAGFASRNKMTLAQLNQVMNQSG 121
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 122 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 181
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 182 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 239
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 240 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 299
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 300 LSKKYVQELREKATI 314
>gi|319405490|emb|CBI79109.1| Peptidyl-prolyl cis-trans isomerase [Bartonella sp. AR 15-3]
Length = 318
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 13/315 (4%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ + L F+ + I + +++A +S + T+NG IT DI +RIA LKLQ+
Sbjct: 6 NSALALFCITFLSVSISISIFFTSQAFAQTS-VVVTVNGSAITSYDIQRRIAFLKLQQRQ 64
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G L A ELI ETLK EI++ I + + F A ++ E S L + +
Sbjct: 65 GNLAVQAKNELIDETLKNNEIKRRNIEVSKDELESAFENFATQNNMTVEQLSQMLTQTDV 124
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFS 186
HFK Y+ Q W +V + + G L + + K + EY ++ ++F
Sbjct: 125 TVEHFKAYILGQMGWGRLVNARYQAEGGILTEQEAVHRILKNGGVKPSTNEYTLQQIIFV 184
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KRIK+A + R + CN + I D++I LE L +
Sbjct: 185 IPEHR--RSAILEKRIKEANQFRANF-RGCNSAKHQVKGILDITIRHLGKFLEPQLPRNW 241
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKH 300
+ +L TN TQ+G+E IA+C + + + + S Q + P +E
Sbjct: 242 EKAILATPAGKMTNLQETQRGIEAIAVCQIKRVSDDRVARLIFSIQDHQKKDIPQLLEAI 301
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 302 SEKYLKELRQTARIQ 316
>gi|23501571|ref|NP_697698.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330]
gi|62289646|ref|YP_221439.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str.
9-941]
gi|82699574|ref|YP_414148.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar
Abortus 2308]
gi|189023896|ref|YP_001934664.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus S19]
gi|225852204|ref|YP_002732437.1| chaperone SurA [Brucella melitensis ATCC 23457]
gi|237815137|ref|ZP_04594135.1| Chaperone surA precursor [Brucella abortus str. 2308 A]
gi|254697090|ref|ZP_05158918.1| Chaperone surA precursor [Brucella abortus bv. 2 str. 86/8/59]
gi|254701467|ref|ZP_05163295.1| Chaperone surA precursor [Brucella suis bv. 5 str. 513]
gi|254704014|ref|ZP_05165842.1| Chaperone surA precursor [Brucella suis bv. 3 str. 686]
gi|254707612|ref|ZP_05169440.1| Chaperone surA precursor [Brucella pinnipedialis M163/99/10]
gi|254709805|ref|ZP_05171616.1| Chaperone surA precursor [Brucella pinnipedialis B2/94]
gi|254713809|ref|ZP_05175620.1| Chaperone surA precursor [Brucella ceti M644/93/1]
gi|254717133|ref|ZP_05178944.1| Chaperone surA precursor [Brucella ceti M13/05/1]
gi|254729986|ref|ZP_05188564.1| Chaperone surA precursor [Brucella abortus bv. 4 str. 292]
gi|256031296|ref|ZP_05444910.1| Chaperone surA precursor [Brucella pinnipedialis M292/94/1]
gi|256060809|ref|ZP_05450969.1| Chaperone surA precursor [Brucella neotomae 5K33]
gi|256113220|ref|ZP_05454088.1| Chaperone surA precursor [Brucella melitensis bv. 3 str. Ether]
gi|256159410|ref|ZP_05457188.1| Chaperone surA precursor [Brucella ceti M490/95/1]
gi|256254704|ref|ZP_05460240.1| Chaperone surA precursor [Brucella ceti B1/94]
gi|256257204|ref|ZP_05462740.1| Chaperone surA precursor [Brucella abortus bv. 9 str. C68]
gi|256264288|ref|ZP_05466820.1| SurA domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|256369119|ref|YP_003106627.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM
4915]
gi|260545602|ref|ZP_05821343.1| SurA domain-containing protein [Brucella abortus NCTC 8038]
gi|260757664|ref|ZP_05870012.1| SurA domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260761491|ref|ZP_05873834.1| SurA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883474|ref|ZP_05895088.1| SurA domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|261218948|ref|ZP_05933229.1| SurA domain-containing protein [Brucella ceti M13/05/1]
gi|261221884|ref|ZP_05936165.1| SurA domain-containing protein [Brucella ceti B1/94]
gi|261315102|ref|ZP_05954299.1| SurA domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261317343|ref|ZP_05956540.1| SurA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261321553|ref|ZP_05960750.1| SurA domain-containing protein [Brucella ceti M644/93/1]
gi|261324801|ref|ZP_05963998.1| SurA domain-containing protein [Brucella neotomae 5K33]
gi|261752010|ref|ZP_05995719.1| SurA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261754669|ref|ZP_05998378.1| SurA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|265988381|ref|ZP_06100938.1| SurA domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265994631|ref|ZP_06107188.1| SurA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265997847|ref|ZP_06110404.1| SurA domain-containing protein [Brucella ceti M490/95/1]
gi|294852046|ref|ZP_06792719.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026]
gi|297248054|ref|ZP_06931772.1| peptidyl-prolyl cis-trans isomerase SurA [Brucella abortus bv. 5
str. B3196]
gi|306842051|ref|ZP_07474724.1| Chaperone surA precursor [Brucella sp. BO2]
gi|23347483|gb|AAN29613.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella suis 1330]
gi|62195778|gb|AAX74078.1| peptidyl-prolyl cis-trans isomerase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615675|emb|CAJ10662.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella melitensis
biovar Abortus 2308]
gi|189019468|gb|ACD72190.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella abortus
S19]
gi|225640569|gb|ACO00483.1| Chaperone surA precursor [Brucella melitensis ATCC 23457]
gi|237789974|gb|EEP64184.1| Chaperone surA precursor [Brucella abortus str. 2308 A]
gi|255999279|gb|ACU47678.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella microti CCM
4915]
gi|260097009|gb|EEW80884.1| SurA domain-containing protein [Brucella abortus NCTC 8038]
gi|260667982|gb|EEX54922.1| SurA domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260671923|gb|EEX58744.1| SurA domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260873002|gb|EEX80071.1| SurA domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260920468|gb|EEX87121.1| SurA domain-containing protein [Brucella ceti B1/94]
gi|260924037|gb|EEX90605.1| SurA domain-containing protein [Brucella ceti M13/05/1]
gi|261294243|gb|EEX97739.1| SurA domain-containing protein [Brucella ceti M644/93/1]
gi|261296566|gb|EEY00063.1| SurA domain-containing protein [Brucella pinnipedialis B2/94]
gi|261300781|gb|EEY04278.1| SurA domain-containing protein [Brucella neotomae 5K33]
gi|261304128|gb|EEY07625.1| SurA domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261741763|gb|EEY29689.1| SurA domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261744422|gb|EEY32348.1| SurA domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262552315|gb|EEZ08305.1| SurA domain-containing protein [Brucella ceti M490/95/1]
gi|262765744|gb|EEZ11533.1| SurA domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094548|gb|EEZ18357.1| SurA domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|264660578|gb|EEZ30839.1| SurA domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|294820635|gb|EFG37634.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026]
gi|297175223|gb|EFH34570.1| peptidyl-prolyl cis-trans isomerase SurA [Brucella abortus bv. 5
str. B3196]
gi|306287892|gb|EFM59312.1| Chaperone surA precursor [Brucella sp. BO2]
gi|326408703|gb|ADZ65768.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella melitensis
M28]
Length = 318
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|306845285|ref|ZP_07477861.1| Chaperone surA precursor [Brucella sp. BO1]
gi|306274444|gb|EFM56251.1| Chaperone surA precursor [Brucella sp. BO1]
gi|326538427|gb|ADZ86642.1| chaperone surA precursor [Brucella melitensis M5-90]
Length = 317
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 2 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 62 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 121
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 122 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 181
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 182 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 239
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 240 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 299
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 300 LSKKYVQELREKATI 314
>gi|163842954|ref|YP_001627358.1| chaperone surA precursor [Brucella suis ATCC 23445]
gi|163673677|gb|ABY37788.1| Chaperone surA precursor [Brucella suis ATCC 23445]
Length = 318
Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 LPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|225627181|ref|ZP_03785219.1| Chaperone surA precursor [Brucella ceti str. Cudo]
gi|260168435|ref|ZP_05755246.1| peptidyl-prolyl cis-trans isomerase, putative [Brucella sp. F5/99]
gi|261757897|ref|ZP_06001606.1| SurA domain-containing protein [Brucella sp. F5/99]
gi|225618016|gb|EEH15060.1| Chaperone surA precursor [Brucella ceti str. Cudo]
gi|261737881|gb|EEY25877.1| SurA domain-containing protein [Brucella sp. F5/99]
Length = 318
Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSVEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|254688956|ref|ZP_05152210.1| Chaperone surA precursor [Brucella abortus bv. 6 str. 870]
gi|260754445|ref|ZP_05866793.1| SurA domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260674553|gb|EEX61374.1| SurA domain-containing protein [Brucella abortus bv. 6 str. 870]
Length = 318
Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSKRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|148559269|ref|YP_001258666.1| putative peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC
25840]
gi|148370526|gb|ABQ60505.1| putative peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC
25840]
Length = 318
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 81/315 (25%), Positives = 149/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + C+ + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVCLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ I V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRSINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|115525297|ref|YP_782208.1| hypothetical protein RPE_3295 [Rhodopseudomonas palustris BisA53]
gi|115519244|gb|ABJ07228.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 305
Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 6/304 (1%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L + F ++ + + + +NGE IT DI +R L +L +
Sbjct: 4 LRLSRLCFAFALLLTTGLSTELRAQSVVVMVNGEPITSYDIDQRSKLTQLSTRKTPPRQE 63
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++ELI E +K +E +K GI ++ F +S E + L GI + K
Sbjct: 64 VIEELINEKVKIKEGKKFGIDPSGADIDSSFANMGSRMRMSPEQLTQTLANSGIRPDTLK 123
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQ 193
+ + +W +V+ F E +I A EY +R V+ +P N
Sbjct: 124 HRMRAEMVWTSLVRGRFKDSLLVGEKDIQAALGDSDKPAGESFEYQMRPVVLIVPRNAA- 182
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ R+K+AE R R+ + C + + + +I +DL P + LL K+
Sbjct: 183 -PASREARMKEAEALRARV-QTCEEANALFKSMPNAAIRATVSKTSADLPPSLRELLDKT 240
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T P T++GVE +A+C ++ + K + + K E Y++ +R A
Sbjct: 241 PIGHLTAPEATKQGVEMVALCSRKPTTADTPKKREIREKMFAEKFEAKSKAYLRDVRKAA 300
Query: 313 IIHY 316
++ Y
Sbjct: 301 MVEY 304
>gi|319407065|emb|CBI80702.1| Peptidyl-prolyl cis-trans isomerase [Bartonella sp. 1-1C]
Length = 319
Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 23/315 (7%)
Query: 20 FVLIIFCIVP----------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
L +FCI + +++A +S + T+NG IT+ DI +RIA LKLQ+
Sbjct: 7 SALALFCITSLSVSSLSVSTFFTSQAFAQTS-VVVTVNGNAITNYDIQRRIAFLKLQQKQ 65
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G L A +LI E LK EI++ I + V F A ++ + + L + +
Sbjct: 66 GNLATQAKNDLIDEVLKNNEIKRRNIEVSKDEVENAFENFAAQNNMTVDQLNQMLTQTDV 125
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFS 186
HFK Y+ Q W +V + + G + + + K + EY ++ ++F
Sbjct: 126 TVEHFKAYIWGQMGWGRLVNARYQAEGGVITEQEASQRILKNGGVKPSTNEYTLQQIIFV 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KR K+A + R + CN + A I D++I LE L +
Sbjct: 186 IPEHRW--SAILEKRKKEANKFRANF-QGCNSAKNQAKGILDITIRHLGKFLEPQLPQNW 242
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-----NTPTKIEKH 300
+ +L TN TQ G+E +A+C + + + + S Q + P +E
Sbjct: 243 EKAILATPAGKMTNFQETQNGIEAVAVCQIKRVSDDRVARLIFSIQDHQKKDIPQLLEAL 302
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 303 SEKYLKELRQTARIQ 317
>gi|254693438|ref|ZP_05155266.1| Chaperone surA precursor [Brucella abortus bv. 3 str. Tulya]
gi|261213691|ref|ZP_05927972.1| SurA domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260915298|gb|EEX82159.1| SurA domain-containing protein [Brucella abortus bv. 3 str. Tulya]
Length = 318
Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats.
Identities = 81/315 (25%), Positives = 149/315 (47%), Gaps = 14/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKI 68
F + L + + + + + A + S ++ ++G IT+ DI R+A LKLQ+
Sbjct: 3 FARPLIASMLGAAVFLTALGTVAAPAFAAGESEVKVIVSGNAITNSDIKHRMAFLKLQRK 62
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+G L ++A EL E LK+ E++ GI V+ + A ++ + +++ G
Sbjct: 63 SGNLNQLARNELTEEMLKRIEMKSRGINISDKEVDDAYAGFASRNKMTLAQLNQVMNQSG 122
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+ HFK+Y+ +Q W +V F E E K K EY ++ V+F
Sbjct: 123 VTPEHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKNGGKKPVATEYHLQQVIFV 182
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P +K ++ + KR ++A R R ++C+ + A I DV++ ++E L ++
Sbjct: 183 VPASK-RSPALLAKRRQEANALRARF-QNCDSTRQQAKGILDVTVRDLGRIIEPQLPGEW 240
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEK 299
+K + N TT P+ T+KGVE++A+C R + + + S + K E+
Sbjct: 241 SKDVKAAGVNRTTKPHDTEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQEKKAEE 300
Query: 300 HEAEYVKKLRSNAII 314
+YV++LR A I
Sbjct: 301 LSKKYVQELREKATI 315
>gi|240850229|ref|YP_002971622.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup]
gi|240267352|gb|ACS50940.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup]
Length = 324
Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 11/313 (3%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L + + ++ + + I T+NG IT+ DI +R+A L+LQ+ G
Sbjct: 13 RVLALFYITSLSVSSLLINGFLIPTVFAQTSIVVTVNGNPITNYDIQRRLAFLRLQQKQG 72
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A +ELI E LK EI++ I ++ V+ F A ++ + + L + I
Sbjct: 73 NLVAQAKKELIDEKLKNIEIKRRNIEVSNDEVDRAFENFATQNNMTIDQLNQILIQTEIT 132
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSI 187
HFK Y+ Q W +V + + G + + K + EY ++ ++F I
Sbjct: 133 VQHFKDYIRGQIGWGRLVSARYQAETGMISEQEAVRRILKNGGVKPSTNEYTLQRIVFVI 192
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246
P ++ ++R ++A R + C A I DV+I LE L +
Sbjct: 193 PAHR--RSEIFERRQREASNFRAHF-RGCANAHNQARGILDVTIRHLGKFLEPQLPNAWE 249
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEA 302
Q +L T T G+E IA+C + + + + S Q+ +P K+E+
Sbjct: 250 QAILATPAGKMTKLQETSDGIEAIAVCKIKRVSDDYVARLIFSLQDSKKRSPQKLEELSD 309
Query: 303 EYVKKLRSNAIIH 315
+Y+ +LR A I
Sbjct: 310 KYLGELRRVARIQ 322
>gi|163868025|ref|YP_001609229.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
gi|161017676|emb|CAK01234.1| Peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
Length = 322
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 11/313 (3%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L + + ++ S + I T+NG IT+ DI +R+A L+LQ+ G
Sbjct: 13 RLLALFCIASLGVSSLLINEFLISSAFAQTAIVVTVNGNPITNYDIQRRVAFLRLQQKQG 72
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A +ELI E LK EI++ I ++ VN F A ++ + + L + I
Sbjct: 73 SLAAQAKKELIDEELKNIEIKRRNIEVSNDEVNRAFENFATQNNMTVDQLNQILIQNDIT 132
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSI 187
HFK Y+ Q W +V + + G + + K + EY ++ ++F I
Sbjct: 133 VQHFKDYIRGQIGWGRLVSARYQAQTGMVSEQEAVRRILKNGGVKPSTNEYTLQRIVFVI 192
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246
P ++ +++R ++A R + C A I DV+I LE L +
Sbjct: 193 PAHR--RSEILERRQREASNFRAHF-RGCANAHNQARGILDVTIRPLGKFLEPQLPSAWE 249
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT----PTKIEKHEA 302
Q +L T T G+E IA+C + + + + S Q+ P K+E+
Sbjct: 250 QAILATPAGKMTKLQETSDGIEAIAVCKIKRISDDYVARLIFSLQDNKKRDPKKLEELSE 309
Query: 303 EYVKKLRSNAIIH 315
+Y+++LR A I
Sbjct: 310 KYLEELRRVARIQ 322
>gi|153009931|ref|YP_001371146.1| SurA domain-containing protein [Ochrobactrum anthropi ATCC 49188]
gi|151561819|gb|ABS15317.1| SurA domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 319
Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 12/312 (3%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F +L+ L V + ++ + A S ++ ++G IT+ DI R+A LKLQ+ G
Sbjct: 8 FASMLSAAVCLTTLGTVAVPAFAAGA-GSEVKVIVSGNAITNSDIQHRVAFLKLQRKGGN 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++A +EL E LK+ E++ I V+ + A +S + +++ G+
Sbjct: 67 LSQVAKEELTDEMLKRIEMKSRSINITDQQVDEAYAGFASRNKMSLAQLNQLMNQSGVTP 126
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPD 189
+HFK+Y+ +Q W +V F E E K K EY ++ V+F IP
Sbjct: 127 DHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKDGGKKPVATEYRLQQVIFVIPA 186
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+K ++ + KR ++A R R + C+ + A I DV++ ++E L ++
Sbjct: 187 SK-RSPALLSKRKQEANALRSRF-QSCDATRQQAKGILDVTVRDLGRIIEQQLPNEWAKA 244
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------TKIEKHEA 302
+K + TT P T+KGVE++A+C R + + + S + K E+
Sbjct: 245 VKATSVGGTTPPQETEKGVEFLAVCSTRQISDDRVAQLVFSMEGADSPAGQEKKAEQLSE 304
Query: 303 EYVKKLRSNAII 314
+Y+K+LR A I
Sbjct: 305 KYLKELREKATI 316
>gi|92117866|ref|YP_577595.1| hypothetical protein Nham_2343 [Nitrobacter hamburgensis X14]
gi|91800760|gb|ABE63135.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 319
Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats.
Identities = 69/307 (22%), Positives = 135/307 (43%), Gaps = 8/307 (2%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
LL + L +F ++ + + + +NGE IT DI +R L+++ +
Sbjct: 6 LLRAFCHLALFAVLSFACLNAPLHAQSVAVMVNGEPITSFDIEQRSRLIQISTHKTPTRQ 65
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ELI E +K +E +K G+ S ++ + +S E + L QG+ +
Sbjct: 66 QVIDELINEKVKVKEAKKFGVNPTSADIDQQYASMGARMRMSPEQLTKSLASQGVRPDTI 125
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----KMKNITVREYLIRTVLFSIPDN 190
K L +W +V+ F + ++ + EY +R V+ +P
Sbjct: 126 KARLKADLVWGSLVRGRFKDSLLVSDRDVNEALRNSGEDQSKTEGFEYQMRPVVLVVPRG 185
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ ++ R K+A+ R R+ + C + + + +I + +DL P ++LL
Sbjct: 186 AAAS--VMESRRKEADALRERV-QSCADATRIFKAMRNATIRETVVKTSADLPPPIRDLL 242
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K+ + T P +T++GVE +AIC K+ + K + + K EK +Y++ +R
Sbjct: 243 DKTPVGHLTPPEITRQGVEMVAICGKKATSVDTPKKKEIREKMFAEKYEKKSKDYLEDIR 302
Query: 310 SNAIIHY 316
+A+I Y
Sbjct: 303 KSAMIEY 309
>gi|49475336|ref|YP_033377.1| hypothetical protein BH05420 [Bartonella henselae str. Houston-1]
gi|49238142|emb|CAF27350.1| hypothetical protein BH05420 [Bartonella henselae str. Houston-1]
Length = 322
Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats.
Identities = 81/309 (26%), Positives = 138/309 (44%), Gaps = 18/309 (5%)
Query: 21 VLIIFCIVPIV-------SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L +FCIVP+ S + I T+NG+ IT+ DI +R A L+LQ+ G L
Sbjct: 14 ILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRAAFLRLQQKQGNLS 73
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A ELI E LK EI++ I +N V F A ++ + + L I H
Sbjct: 74 EQAKNELINEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQLNQILIDNDITVQH 133
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSIPDN 190
FK Y+ Q W +V + + G + + K + EY ++ ++F IP +
Sbjct: 134 FKDYIRGQLGWGRLVNARYQAETGMISEQEAVRRILKNGGVKPSTNEYTLQRIIFVIPAH 193
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ ++R ++A R + C K A I DV++ LE L +++ +
Sbjct: 194 R--RSEIFERRQREANNFRAHF-QGCANTSKQAKGILDVTVRNLGKFLEPQLPREWEQAI 250
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN----TPTKIEKHEAEYV 305
+ + T T G+E IA+C + + + + S Q+ +P ++E +Y+
Sbjct: 251 RITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQELEILSEKYL 310
Query: 306 KKLRSNAII 314
K+LR A I
Sbjct: 311 KELRQVARI 319
>gi|222085450|ref|YP_002543980.1| peptidyl-prolyl cis-trans isomerase protein [Agrobacterium
radiobacter K84]
gi|221722898|gb|ACM26054.1| peptidyl-prolyl cis-trans isomerase protein [Agrobacterium
radiobacter K84]
Length = 316
Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/311 (31%), Positives = 164/311 (52%), Gaps = 10/311 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++ + +I + S +S ++ +N VIT GDI+KRI LKLQ G+L
Sbjct: 8 MRAVLFGAAALIMATFAMPSSDVAFAASEVKVVVNNSVITSGDIAKRINFLKLQHQKGDL 67
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K+A ++L+ ETLK+ EI + ++ ++ V+ F + A + +S + LDK G+G +
Sbjct: 68 NKLAQEQLVDETLKRAEISRVRMSVSTSDVDSAFGRFAASNKMSPQQLGQILDKMGVGVD 127
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN---ITVREYLIRTVLFSIPD 189
HFK Y+A+ WP VV F GN + +N EY ++ ++F +P
Sbjct: 128 HFKSYIAVSMSWPRVVNARFGSSGGNKLSNDDLVTRMTENKTKPVTTEYFLKQIVFVVPQ 187
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
K + +R +AE SR + P C++ + FA+ + DVS+ +L DL ++ L
Sbjct: 188 AK--RNAILNQRKSEAEASRAKFP-GCDQAKVFAATMRDVSVQDLGRVLAPDLPEIWKPL 244
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT----PTKIEKHEAEYV 305
L++++ NTT P VT +GVEY+AIC +R + ++A A A++ I ++ +Y+
Sbjct: 245 LEQAKGNTTTPVVTDRGVEYVAICSQRQVNDDVAAAAVFRAEDIGKAGAQGISANDKKYM 304
Query: 306 KKLRSNAIIHY 316
+LRS A I Y
Sbjct: 305 DELRSKAQILY 315
>gi|86357089|ref|YP_468981.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli CFN 42]
gi|86281191|gb|ABC90254.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli CFN 42]
Length = 314
Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 164/316 (51%), Gaps = 15/316 (4%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
D K +T + ++ ++ + A +S ++ +NG IT GD++KR A L+LQ
Sbjct: 3 DAKKAITAFLAGAAIALLTGLAGPALA-ASGVQAVVNGTAITSGDVAKRQAFLRLQHTKA 61
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K A ++LI ETLK+QE+ + ++ V+ F + + LS E S LD+ G+G
Sbjct: 62 DA-KTATEQLIDETLKRQEVARVHMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVG 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIP 188
+HFK ++A+Q WP VV + ++ + + + EY+++ ++F IP
Sbjct: 121 VDHFKGFIAVQMSWPRVVNARYGSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIP 180
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ K KR +AE SR + P C++ + FA+ + DVS+ +L ++ P +++
Sbjct: 181 EAK--RGAITGKRKGEAEASRSKFP-GCDQAKTFAATMRDVSVRDLGRMLAPEIPPDWKS 237
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK--------IEKH 300
L+++++ NTT VT+KGVEY+AIC +R + + A + ++ ++
Sbjct: 238 LVEQAKGNTTGTRVTEKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENEN 297
Query: 301 EAEYVKKLRSNAIIHY 316
+Y+ +LR A I Y
Sbjct: 298 SKKYLDELRKKAQIAY 313
>gi|319404053|emb|CBI77641.1| Peptidyl-prolyl cis-trans isomerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 319
Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 23/315 (7%)
Query: 20 FVLIIFCIVP----------IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
L +FCI + +++A +S + T+NG IT+ DI +RIA LKLQ+
Sbjct: 7 SALALFCITSLSVSSLSVSTFFTSQAFAQTS-VVVTVNGSAITNYDIQRRIAFLKLQQKQ 65
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G L A +LI E LK EI++ I ++ V F A ++ + + L + +
Sbjct: 66 GNLATQAKNDLIDEVLKNNEIKRRNIEVSTDEVENAFENFAAQNNMTVDQLNQMLTQTDV 125
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFS 186
HFK Y+ Q W +V + + G + + + K + EY ++ ++F
Sbjct: 126 TVEHFKAYILGQMGWARLVNARYQAEGGVITEQEASQRILKNGGVKPSTNEYTLQQIIFV 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+++ ++KR K+A + R + CN + A I D++I LE L +
Sbjct: 186 IPEHR--RSAILEKRKKEANKFRANF-QGCNSAKNQAKGILDITIRHLGKFLEPQLPQNW 242
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-----TPTKIEKH 300
+ +L TN TQ G+E +A+C + + + + S Q+ P +E
Sbjct: 243 EKAILATPAGKMTNFQETQNGIEAVAVCQIKRVSDDRVARLIFSIQDHQKKNIPQLLEAL 302
Query: 301 EAEYVKKLRSNAIIH 315
+Y+K+LR A I
Sbjct: 303 SEKYLKELRQTARIQ 317
>gi|209885477|ref|YP_002289334.1| SurA N- domain family [Oligotropha carboxidovorans OM5]
gi|209873673|gb|ACI93469.1| SurA N- domain family [Oligotropha carboxidovorans OM5]
Length = 330
Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 8/308 (2%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+ + + L + + + I +NGE IT DI +R L+ L
Sbjct: 24 LSVFVSRIALAFAAFIILAVTAPSVQAQGIVVMVNGEPITTYDIEQRTKLITLTTRKAPT 83
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A+QELI + LK +E +K G+ ++ V+ F A+ +S++ + L QG+ +
Sbjct: 84 RQQALQELIDDRLKIKEAKKFGVDLSASDVDSAFAGMAQRMRISSDQLAQVLQAQGVRPD 143
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ---KMKNITVREYLIRTVLFSIPD 189
K L + W +V+ F E ++ A + EY +R ++ +P
Sbjct: 144 TMKFRLKADTAWGALVRGRFKQSLLVGERDVQAAVGENPSGERTESYEYHMRPIVLFVPR 203
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ G V++R K+AE R R+ + C + + + SI +DL P + L
Sbjct: 204 G---SSGAVEQRKKEAEALRERI-QSCEEATRVFKSLRQASIRDTIVKTSADLPPNLREL 259
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
L K+ T P VT++G+E +A+C+++ + K + K E Y++ L
Sbjct: 260 LDKTPVGRMTAPEVTRQGIEMVALCNRQVTTADTPAKRAARDKLFAQKYEAKSKSYLEDL 319
Query: 309 RSNAIIHY 316
R A+I Y
Sbjct: 320 RKRAMIEY 327
>gi|75675872|ref|YP_318293.1| hypothetical protein Nwi_1680 [Nitrobacter winogradskyi Nb-255]
gi|74420742|gb|ABA04941.1| conserved unknown protein [Nitrobacter winogradskyi Nb-255]
Length = 314
Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 8/307 (2%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
L +L +F + VS S + I +NGE IT DI +R L+K+ +
Sbjct: 6 LYRPSSLLAVFAFLTFVSMNSPLHAQSIAVMVNGEPITTLDIEQRSRLIKISTHKSPSRQ 65
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ELI E +K +E +K G+ S ++ + G+S E + L QGI +
Sbjct: 66 EVIDELIDEKVKVKEAKKYGVNPTSTDIDRAYANMGARMGMSPEQLTKSLGSQGIRPDTI 125
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFSIPDN 190
K L +W +V+ F + ++ + + I EY +R V+ +P
Sbjct: 126 KSRLKADLVWGSLVRGRFKESLLVSDRDVNEALKNSGEDQSKIEGVEYQMRPVVLIVPRG 185
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ V+ R +A R R+ + C ++ + + + ++ + +DL P ++LL
Sbjct: 186 ATAS--MVEARRNEANALRERV-QSCAEIIRTVKVMRNATLRETITKTSTDLPPPLRDLL 242
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K+ + T P +T++GVE +A+C K+ + K + + K EK Y++++R
Sbjct: 243 DKTAVGHLTPPEMTRQGVEMVAVCGKKVTSVDTPKKKEIREKMFADKYEKRSKSYLERIR 302
Query: 310 SNAIIHY 316
+A+I Y
Sbjct: 303 KSAMIEY 309
>gi|239831518|ref|ZP_04679847.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301]
gi|239823785|gb|EEQ95353.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301]
Length = 336
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 12/320 (3%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K+ + F +L+ L V + S ++ ++G IT+ DI R+A L
Sbjct: 17 KMMIARPLFASMLSAAVCLTTLGTVAA-PAFAAGAGSEVKVIVSGNAITNSDIQHRVAFL 75
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
KLQ+ G L ++A QEL E LK+ E++ GI V+ + A +S +
Sbjct: 76 KLQRKGGNLAQVAKQELTDEMLKRIEMKSRGIDISDRQVDEAYAGFATRNKMSLAQLNQL 135
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIR 181
+++ G+ +HFK+Y+ +Q W +V F E E K K EY ++
Sbjct: 136 MNQSGVTPDHFKKYIMVQMGWGRLVSARFRATGMVSEQEAVQRMLKDGGKKPVATEYRLQ 195
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
V+F +P +K ++ + KR ++A R R ++C+ + A I DV++ ++E
Sbjct: 196 QVIFVVPASK-RSPALLAKRKQEANALRSRF-QNCDATRQQAKGILDVTVRDLGRIIEQQ 253
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP------ 294
L ++ +K + TT P T+KGVE++A+C R + + + S +
Sbjct: 254 LPNEWSKAIKSTSVGGTTPPQETEKGVEFLAVCSTRQVSDDRVAQLVFSMEGADSPAGQE 313
Query: 295 TKIEKHEAEYVKKLRSNAII 314
K E+ +Y+ +LR A I
Sbjct: 314 KKAEQLSEKYLGELREKAKI 333
>gi|86749597|ref|YP_486093.1| hypothetical protein RPB_2477 [Rhodopseudomonas palustris HaA2]
gi|86572625|gb|ABD07182.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 309
Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 10/309 (3%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K F + C V S A + + +NGE IT+ DI +R L KL
Sbjct: 4 KFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSN-QSRTR 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + ELI E +K +E +K G+ + ++ F + +S + L QGI
Sbjct: 63 QQVLDELIDEKVKIREGKKFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRPGT 122
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-----KQKMKNITVREYLIRTVLFSIP 188
K + + +W +V+ F E +I A EY +R V+ +
Sbjct: 123 LKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKGGDDKSTTESFEYQMRPVVLIV- 181
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
++ G V+ R K+AE R R+ + C ++ + + +I +DL P +
Sbjct: 182 -SRGSGAGAVEARRKEAEALRSRV-QSCADADRIFKALPNAAIRATVVKTSADLPPALRE 239
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+L K+ T P T++GVE +A+C ++ + +K + + K + +Y+++
Sbjct: 240 ILDKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRE 299
Query: 308 LRSNAIIHY 316
R+ A+I Y
Sbjct: 300 SRNAAMIEY 308
>gi|299133711|ref|ZP_07026905.1| SurA domain protein [Afipia sp. 1NLS2]
gi|298591547|gb|EFI51748.1| SurA domain protein [Afipia sp. 1NLS2]
Length = 314
Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 7/309 (2%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F+ + + L + ++ +++ A + + +NGE IT DI +R L+ L
Sbjct: 6 FLSVFASRLALSLATLLTLLATAPSARAQAVVVMVNGEPITTYDIEQRAKLIALTTHKSA 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + +LI + LK +E +K GI + ++ + + G+SA+ S L QG+
Sbjct: 66 PRQEVINQLIDDRLKIKEAKKFGINMTPSEIDSSYAAMGQRMGMSADQLSKVLMAQGVRP 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK---MKNITVREYLIRTVLFSIP 188
K ++ + W +V+ + E ++ A ++ EY +R V+ +P
Sbjct: 126 ETMKLRMSADTAWGALVRGRYKQSLMVSEHDVRAASGGDSSPQDTESYEYHLRPVVIFVP 185
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ V++R K+AE R R+ + C + + +I +DL +
Sbjct: 186 RG--SSSAVVEQRKKEAEIIRDRV-QSCAEAATTFKSLRQGTIRDTIIKTSADLPANLRE 242
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
LL K+ + T P VT++G+E + +CD++ + K + K E Y+
Sbjct: 243 LLDKTPVGHMTPPEVTRQGIEMVVLCDRKVTSADTPAKRAARDKLFAQKYEAKSKSYLDD 302
Query: 308 LRSNAIIHY 316
LR A+I Y
Sbjct: 303 LRKAAMIEY 311
>gi|241203946|ref|YP_002975042.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240857836|gb|ACS55503.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 314
Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 159/316 (50%), Gaps = 15/316 (4%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
D K +T + ++ + + A +S ++ +NG IT GD++KR A L+LQ
Sbjct: 3 DAKKAITKFLAGAALALLTGFAGSALA-ASEVKAVVNGTAITSGDVAKRQAFLRLQHTKA 61
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K A ++LI E LK+QE+ + ++ V+ F + + LS E S LD+ G+G
Sbjct: 62 DA-KAAEEQLIDEALKRQEVTRVHMSVSQQDVDASFARFSSGNKLSPEQMSQILDRAGVG 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIP 188
+HFK ++A+Q WP VV + ++ + + + EY+++ V+F IP
Sbjct: 121 VDHFKGFIAVQMSWPRVVNARYGSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQVIFVIP 180
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
K KR +AE SR + P C++ + FA+ + DVS+ +L ++ P ++
Sbjct: 181 QAK--RGAITGKRKGEAEASRSKFP-GCDQAKVFAATMRDVSVRDLGRMLAPEIPPDWKP 237
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK--------IEKH 300
L+++++ NTT VT KGVEY+AIC +R + + A + ++ ++
Sbjct: 238 LVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKGGKDASPENEN 297
Query: 301 EAEYVKKLRSNAIIHY 316
+Y+ +LR A I Y
Sbjct: 298 SKKYLDELRKKAQIAY 313
>gi|91977437|ref|YP_570096.1| hypothetical protein RPD_2969 [Rhodopseudomonas palustris BisB5]
gi|91683893|gb|ABE40195.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 309
Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats.
Identities = 68/308 (22%), Positives = 133/308 (43%), Gaps = 10/308 (3%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K L L +FC V + A + + +NGE IT+ DI +R L +L +
Sbjct: 4 KFLFRILGLALFCTVTVGGGLGVATAQSVAVMVNGEPITNFDIEQRSKLDRLSRA-SRTR 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + ELI E +K +E +K G++ + + F + +S + + L QGI
Sbjct: 63 QQVLDELIDEKVKIREGKKYGVSPSDSDIESSFSTMSSRMRMSPDQMTKMLSAQGIRPET 122
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-----MKNITVREYLIRTVLFSIP 188
K + + +W +V+ F E +I A EY +R V+ +
Sbjct: 123 LKSKIKAEMVWASLVRGRFKDSLLVGEKDIQAQLGAKGGDEPATTESFEYQLRPVVLIV- 181
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
++ + ++ R K+AE R R+ + C ++ + + +I +DL +
Sbjct: 182 -SRGSDSSALEARRKEAESLRSRV-QSCADADRIFKALPNTAIRSTVVKTSADLPQALRE 239
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+L K+ T P T++G+E +A+C ++ + K + + K + EY+++
Sbjct: 240 ILDKTPVGQMTAPEATKQGIEMVALCSRKPTTADTPKKREIREKLFAEKFQAKSKEYLRE 299
Query: 308 LRSNAIIH 315
+R+ A+I
Sbjct: 300 VRNAAMIE 307
>gi|209548668|ref|YP_002280585.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534424|gb|ACI54359.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 314
Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 161/316 (50%), Gaps = 15/316 (4%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
D K +T + ++ V+ + A +S ++ +NG IT GD++KR A ++LQ
Sbjct: 3 DAKKAITKFLAGAALALLTGVAAPALA-ASEVKAVVNGTAITSGDVAKRQAFMRLQHTKA 61
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K A ++LI ETLK+QE+ + ++ V+ F + + LS E S LD+ G+G
Sbjct: 62 DA-KAAEEQLIDETLKRQEVSRVHMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVG 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIP 188
+HFK ++A+Q WP VV + ++ + + + EY+++ ++F IP
Sbjct: 121 VDHFKGFIAVQMSWPRVVNARYGSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIP 180
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
K KR +AE SR + P C++ + FA+ + DVS+ +L ++ P ++
Sbjct: 181 QAK--RNAITGKRKGEAEASRSKFP-GCDQAKVFAATMRDVSVRDLGRMLAPEIPPDWKP 237
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--------KIEKH 300
L+++++ NTT VT KGVEY+AIC +R + + A + ++ ++
Sbjct: 238 LVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLGKAKGGKDASPENEN 297
Query: 301 EAEYVKKLRSNAIIHY 316
+Y+ +LR A I Y
Sbjct: 298 SKKYLDELRKKAQIAY 313
>gi|15888445|ref|NP_354126.1| hypothetical protein Atu1105 [Agrobacterium tumefaciens str. C58]
gi|15156137|gb|AAK86911.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 315
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 86/293 (29%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 28 VPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ +V Y A + S ++ +N IT+ DI++R+A LKLQ+ +G L + A ++L+ E LK
Sbjct: 23 MAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLNEKAREQLVDEALK 82
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
++EI + ++ + V+ F + A N + E + L + G+G HFK ++A+Q WP
Sbjct: 83 REEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVLAQAGVGAEHFKAFIAVQMSWPR 142
Query: 147 VVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+V + + ++ K++ + EY ++ V+F IP+ K KR +A
Sbjct: 143 LVNARYGARGKMSNQDLVTRLKERGEKPVTTEYFLQQVIFVIPEAK--RNAITGKRKAEA 200
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
E SR R P C++ FA+ + DV+I +L +L ++ L++K++ TT VT+
Sbjct: 201 EASRKRYP-GCDQAMSFAATMRDVAIKDLGRILAPELPEDWKALVEKTKEGGTTGTRVTE 259
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLRSNAII 314
KGVEY+AIC +R + + A + +++ + +E +Y+++LR A I
Sbjct: 260 KGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEKKYIEELRKKAQI 312
>gi|222148150|ref|YP_002549107.1| hypothetical protein Avi_1539 [Agrobacterium vitis S4]
gi|221735138|gb|ACM36101.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 315
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 85/291 (29%), Positives = 150/291 (51%), Gaps = 8/291 (2%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ + + +N IT+ D+++RIA LKL+ G++ K A QELI E LK+Q
Sbjct: 25 APATVTPALADTGVAVVVNKTAITNTDLARRIAFLKLRHETGDVAKKARQELIDEQLKRQ 84
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
EI + G++ + V+ F + A + LS + LDK G+G HFK Y+A+Q WP +V
Sbjct: 85 EIARVGMSVSTMDVDQAFGRFAASNKLSTQQMGQILDKAGVGVEHFKAYIAVQMSWPRLV 144
Query: 149 KNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + ++ + + EY ++ V+F +P K KR +AE
Sbjct: 145 NARYASRSKMSNQDMVTRLLENKQKPVTTEYTLKQVIFVVPVAK--RATLTAKRKAEAEA 202
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267
SR + P C++ FA DVSI +++ +L ++ L++ + TT VT++G+
Sbjct: 203 SRAKFP-GCDQAMDFAKNYLDVSIRDLGRVMKPELPDDWKPLIEGANGTTTGTRVTERGI 261
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPT----KIEKHEAEYVKKLRSNAII 314
EY+AIC+++ + ++A +A A++ K + + +Y+ +LRS A I
Sbjct: 262 EYLAICNQKQVSDDLAAEAVFKAEDIGKEDKSKGDPNSEKYLTELRSKAQI 312
>gi|190891133|ref|YP_001977675.1| peptidyl-prolyl cis-trans isomerase [Rhizobium etli CIAT 652]
gi|218517103|ref|ZP_03513943.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli 8C-3]
gi|190696412|gb|ACE90497.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli CIAT 652]
Length = 314
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 162/318 (50%), Gaps = 15/318 (4%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
++D K +T + ++ ++ + A +S ++ +NG IT GD++KR A L+LQ
Sbjct: 1 MTDAKKAITAFLAGAALALLTGLAGPALA-ASEVQAVVNGTAITSGDVAKRQAFLRLQHT 59
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ K A ++LI ETLK+QE+ + ++ V+ F + + LS S LD+ G
Sbjct: 60 AADA-KTAKEQLIDETLKRQEVARVHMSVSQQDVDASFARFSAGNKLSVAQMSQILDRAG 118
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+G +HFK ++A+Q WP VV + ++ + + + EY+++ ++F
Sbjct: 119 VGVDHFKGFIAVQMSWPRVVNARYGSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFV 178
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+ K KR +AE SR + P C++ + FA+ + DV++ +L ++ P +
Sbjct: 179 IPEAK--RGAITGKRKGEAEASRSKFP-GCDQAKVFAATMRDVAVRDLGRMLAPEIPPDW 235
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK--------IE 298
+ L+++++ NTT VT KGVEY+AIC +R + + A + ++
Sbjct: 236 KPLVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPEN 295
Query: 299 KHEAEYVKKLRSNAIIHY 316
+ +Y+ +LR A I Y
Sbjct: 296 DNSKKYLDELRKKAQIAY 313
>gi|218661101|ref|ZP_03517031.1| peptidyl-prolyl cis-trans isomerase protein [Rhizobium etli IE4771]
Length = 295
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 84/294 (28%), Positives = 150/294 (51%), Gaps = 14/294 (4%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ +
Sbjct: 5 AGPALAASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVAR 63
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
++ V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV +
Sbjct: 64 VRMSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARY 123
Query: 153 MLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
++ + + + EY+++ ++F IP K KR +AE SR
Sbjct: 124 GSTSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAK--RAAITGKRKGEAEASRS 181
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270
+ P C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+
Sbjct: 182 KFP-GCDQSKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYL 240
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTK--------IEKHEAEYVKKLRSNAIIHY 316
AIC +R + + A + ++ ++ +Y+ +LR A I Y
Sbjct: 241 AICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSKKYLDELRKKAQIAY 294
>gi|327188010|gb|EGE55240.1| putative peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli CNPAF512]
Length = 314
Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
++D K +T + ++ ++ + A +S ++ +NG IT GD++KR A L+LQ
Sbjct: 1 MTDAKKAITAFLAGAALALLTGLAGPALA-ASEVQAVVNGTAITSGDVAKRQAFLRLQHT 59
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ K A ++LI ETLK+QE+ + ++ V+ F + + LS S LD+ G
Sbjct: 60 AADA-KTAKEQLIDETLKRQEVARVHMSVSQQDVDASFARFSAGNKLSVAQMSQILDRAG 118
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFS 186
+G +HFK ++A+Q WP VV + ++ + + + EY+++ ++F
Sbjct: 119 VGVDHFKGFIAVQMSWPRVVNARYGSTTRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFV 178
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+ K KR +AE SR + P C++ + FA+ + DV++ +L ++ P +
Sbjct: 179 IPEAK--RGAITGKRKGEAEASRSKFP-GCDQAKVFAATMRDVAVRDLGRMLAPEIPPDW 235
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK--------IE 298
+ L+++++ NTT VT KGVEY+AIC +R + + A + ++
Sbjct: 236 KPLVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPEN 295
Query: 299 KHEAEYVKKLRSNAIIHY 316
++ +Y+ +LR A I Y
Sbjct: 296 ENSKKYLDELRKKAQIAY 313
>gi|116251332|ref|YP_767170.1| hypothetical protein RL1566 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255980|emb|CAK07061.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 314
Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats.
Identities = 85/287 (29%), Positives = 148/287 (51%), Gaps = 14/287 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S ++ +NG IT GD++KR A L+LQ + K A ++LI E LK+QE+ + ++
Sbjct: 31 SEVKAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAEEQLIDEALKRQEVARVRMSVSQ 89
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV +
Sbjct: 90 QDVDASFARFSSGNKLSPEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGSTSRLS 149
Query: 160 EMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
++ + + + EY+++ ++F IP K KR +AE SR + P C+
Sbjct: 150 NYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAK--RGAITGKRKGEAEASRSKFP-GCD 206
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + FA+ + DVS+ LL ++ P ++ L+++++ NTT VT KGVEY+AIC +R
Sbjct: 207 QAKVFAATMRDVSVRDLGRLLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQ 266
Query: 278 LGGEIALKAYLSAQNTPTK--------IEKHEAEYVKKLRSNAIIHY 316
+ + A + ++ ++ +Y+ +LR A I Y
Sbjct: 267 VSDDQAAEMVFRQEDLDKSKAGKDASPENENSKKYLDELRKKAQIAY 313
>gi|218671035|ref|ZP_03520706.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli GR56]
Length = 314
Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 14/292 (4%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ +
Sbjct: 26 PALAASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVR 84
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
++ V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV +
Sbjct: 85 MSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGS 144
Query: 155 KYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ + + + EY+++ ++F IP K KR +AE SR +
Sbjct: 145 TSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAK--RAAITGKRKGEAEASRSKF 202
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
P C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AI
Sbjct: 203 P-GCDQAKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAI 261
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKH--------EAEYVKKLRSNAIIHY 316
C +R + + A + ++ +Y+ +LR A I Y
Sbjct: 262 CSQRQVSDDQAAEMVFRQEDLDKSKAAKNGPPENENSKKYLDELRKKAQIAY 313
>gi|218461597|ref|ZP_03501688.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli Kim 5]
Length = 313
Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 84/292 (28%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+S ++ +NG IT GD++KR A L+LQ + K A ++LI ETLK+QE+ +
Sbjct: 25 PALAASEVQAVVNGTAITSGDVAKRQAFLRLQHTKADA-KTAKEQLIDETLKRQEVARVR 83
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
++ V+ F + + LS E S LD+ G+G +HFK ++A+Q WP VV +
Sbjct: 84 MSVSQQDVDASFARFSAGNKLSVEQMSQILDRAGVGVDHFKGFIAVQMSWPRVVNARYGS 143
Query: 155 KYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ + + + EY+++ ++F IP K KR +AE SR +
Sbjct: 144 TSRLSNYDLVSRMMQNNKQKPVTTEYMLQQIIFVIPQAK--RAAITGKRKGEAEASRSKF 201
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
P C++ + FA+ + DV++ +L ++ P ++ L+++++ NTT VT KGVEY+AI
Sbjct: 202 P-GCDQSKVFAATMRDVAVRDLGRMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAI 260
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIE--------KHEAEYVKKLRSNAIIHY 316
C +R + + A + ++ ++ +Y+ +LR A I Y
Sbjct: 261 CSQRQVSDDQAAEMVFRQEDLDKSKAGKNGPPENENSKKYLDELRKKAQIAY 312
>gi|13476523|ref|NP_108093.1| hypothetical protein mll7863 [Mesorhizobium loti MAFF303099]
gi|14027284|dbj|BAB54238.1| mll7863 [Mesorhizobium loti MAFF303099]
Length = 310
Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats.
Identities = 78/307 (25%), Positives = 142/307 (46%), Gaps = 14/307 (4%)
Query: 15 LLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + F L++ V + A +S I+ +N IT GDI+ R A LKLQ+ G+
Sbjct: 8 LFSAGFALLVAATSVSMTVMTPPAFASEIKYVVNDIPITTGDIAHRAAFLKLQRKKGD-- 65
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A QE+I +TL+ E + GI V + + A N + ++K G+G +H
Sbjct: 66 --AAQEMIDQTLRLAEARRLGIRISDAQVEAAYQRFATNNKMQLGQLDGVMEKSGVGKDH 123
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----KMKNITVREYLIRTVLFSIPD 189
FK+++ Q W + + G E A ++ + EY+++ V+F +P
Sbjct: 124 FKEFIRAQMAWNQALSARYRSGEGGSVTEQDAVRRMLDKGGAKPSATEYMLQQVIFVVPA 183
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + + KR ++A+ R R CN +FA + DV++ +L L P +
Sbjct: 184 S--ERSATLAKRKREADAMRARF-NGCNTTREFAKGLIDVTVRDLGRVLAPQLPPDWAEQ 240
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK-IEKHEAEYVKK 307
+K ++ T T++GVE+I IC R++ + + ++ + K + +YV +
Sbjct: 241 IKATKVGGATVTRETERGVEFIGICSSREVSDDKTAQMVFQSEGSNDKAADDLSKKYVDE 300
Query: 308 LRSNAII 314
L++ A I
Sbjct: 301 LKAKARI 307
>gi|150395986|ref|YP_001326453.1| SurA domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027501|gb|ABR59618.1| SurA domain [Sinorhizobium medicae WSM419]
Length = 315
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 161/312 (51%), Gaps = 11/312 (3%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ +++L+ + + + + A +S + +NG VIT GD++KR+A L+LQ+ +
Sbjct: 5 NSIVRVLSAIALAGALSLATGTATTATAAASSVEVVVNGTVITSGDVAKRVAFLRLQRQS 64
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G A Q+L+ E LK+ EI + + ++ V+ F + A LS E L++ G+
Sbjct: 65 GGA-AEAKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFASGNKLSPEQLGKILEQAGV 123
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFM--LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G +HFKQY+A+Q WP VV + + ++ + EY ++ V+F I
Sbjct: 124 GIDHFKQYIAVQMSWPRVVNFRYGNASRLSGGDLVKRMMQGGGNKPVTTEYFLQQVIFVI 183
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
P++K KR +A SR + P C+ + FA+ DVSI +L L ++
Sbjct: 184 PESK--RGAITAKRQAEANASRSKFP-GCDTSKAFAANYRDVSIRSLGRILAQQLPEDWK 240
Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK----IEKHEA 302
L++K+ ++ T VT+KGVEY+AIC KR + + A + A++ K + + A
Sbjct: 241 PLVEKAGDSMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSGGEDPNSA 300
Query: 303 EYVKKLRSNAII 314
+Y+++LRS A I
Sbjct: 301 KYLEELRSKAQI 312
>gi|260466949|ref|ZP_05813131.1| SurA domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029246|gb|EEW30540.1| SurA domain protein [Mesorhizobium opportunistum WSM2075]
Length = 307
Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats.
Identities = 76/307 (24%), Positives = 144/307 (46%), Gaps = 14/307 (4%)
Query: 15 LLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + F L++ V + A +S I+ +N IT GDI+ R A LKLQ+ G+
Sbjct: 5 LFSAGFALLVAATSVSMTVMTPPAFASEIKYVVNNVPITTGDIAHRAAFLKLQRKKGD-- 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A QE+I +TL+ E + GI V + + A + + + ++K G+G +H
Sbjct: 63 --AAQEMIDQTLRLAEARRLGIRISDAQVEAAYQRFATSNKMQLSQLNGVMEKSGVGKDH 120
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----KMKNITVREYLIRTVLFSIPD 189
FK+++ Q W + + G E A ++ + EY+++ V+F +P
Sbjct: 121 FKEFIRAQMAWNQALGARYRSGEGGSVTEQDAVRRMLDKGGAKPSATEYMLQQVIFVVPA 180
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + + KR ++A+ R R C +FA + DV++ +L L P +
Sbjct: 181 S--ERSATLAKRKREADAMRARF-NGCTTTREFAKGLIDVTVRDLGRVLAPQLPPDWAEQ 237
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-EKHEAEYVKK 307
+K ++ T T++GVE+I IC R++ + + ++ + K ++ +YV++
Sbjct: 238 IKATKVGGATVTRETERGVEFIGICSSREVSDDKTAQMVFQSEGSSDKNADELSKKYVEE 297
Query: 308 LRSNAII 314
L++ A I
Sbjct: 298 LKAKAHI 304
>gi|15964904|ref|NP_385257.1| hypothetical protein SMc00581 [Sinorhizobium meliloti 1021]
gi|15074083|emb|CAC45730.1| Hypothetical protein SMc00581 [Sinorhizobium meliloti 1021]
Length = 316
Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 12/312 (3%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ ++LL+ + + + A +S + +N VIT GD++KR+A LKLQ+ +
Sbjct: 7 NAIVRLLSAVALAGALSVAAGTVTTAMA-ASTVEVVVNSTVITSGDVAKRVAFLKLQRQS 65
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G A Q+L+ E LK+ EI + + ++ V+ F + A LS E LD+ G+
Sbjct: 66 GGA-AEAKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFAAGNKLSPEQLGKILDQAGV 124
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSI 187
G +HFKQY+A+Q WP VV + ++ + EY ++ V+F I
Sbjct: 125 GVDHFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMQGGGNKPVTTEYFLQQVIFVI 184
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
P++K KR +A SR + P C+ + FA+ DVSI +L L ++
Sbjct: 185 PESK--RGAITAKRQAEANASRSQFP-GCDTSKAFAANYRDVSIRSLGRILAQQLPEDWK 241
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK----HEA 302
L++K+ TT VT+KGVEY+AIC KR + + A + A++ K + + A
Sbjct: 242 PLVEKAGDGMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSEGEDPNSA 301
Query: 303 EYVKKLRSNAII 314
+Y+++LRS A I
Sbjct: 302 KYLEELRSKAQI 313
>gi|307300974|ref|ZP_07580743.1| SurA domain protein [Sinorhizobium meliloti BL225C]
gi|307317709|ref|ZP_07597147.1| SurA domain protein [Sinorhizobium meliloti AK83]
gi|306896471|gb|EFN27219.1| SurA domain protein [Sinorhizobium meliloti AK83]
gi|306903929|gb|EFN34515.1| SurA domain protein [Sinorhizobium meliloti BL225C]
Length = 315
Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 12/312 (3%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ ++LL+ + + + A +S + +N VIT GD++KR+A LKLQ+ +
Sbjct: 6 NAIVRLLSAVALAGALSVAAGTVTTAMA-ASTVEVVVNSTVITSGDVAKRVAFLKLQRQS 64
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G A Q+L+ E LK+ EI + + ++ V+ F + A LS E LD+ G+
Sbjct: 65 GGA-AEAKQQLVDEVLKRAEIARVQQSVSTDEVDAAFARFAAGNKLSPEQLGKILDQAGV 123
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSI 187
G +HFKQY+A+Q WP VV + ++ + EY ++ V+F I
Sbjct: 124 GVDHFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMQGGGNKPVTTEYFLQQVIFVI 183
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
P++K KR +A SR + P C+ + FA+ DVSI +L L ++
Sbjct: 184 PESK--RGAITAKRQAEANASRSQFP-GCDTSKAFAANYRDVSIRSLGRILAQQLPEDWK 240
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK----HEA 302
L++K+ TT VT+KGVEY+AIC KR + + A + A++ K + + A
Sbjct: 241 PLVEKAGDGMTTGTRVTEKGVEYLAICKKRQVNDDAAAEIVFRAEDLGKKKSEGEDPNSA 300
Query: 303 EYVKKLRSNAII 314
+Y+++LRS A I
Sbjct: 301 KYLEELRSKAQI 312
>gi|227821473|ref|YP_002825443.1| putative survival protein SurA, probable peptidyl-prolyl cis-trans
isomerase protein [Sinorhizobium fredii NGR234]
gi|227340472|gb|ACP24690.1| putative survival protein SurA, probable peptidyl-prolyl cis-trans
isomerase protein [Sinorhizobium fredii NGR234]
Length = 312
Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats.
Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 11/309 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I ++ L + ++ I S + +S ++ +N VIT GDI+KR+A L+LQ+ G
Sbjct: 5 ISIVRALSALAVAGVLSIASGAAVQAASGVKVIVNSTVITSGDIAKRVAFLRLQRQGGGA 64
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
A ++L+ E LK+ EI + + + V+ + + A LS E LD+ G+G
Sbjct: 65 -AEAEKQLVDEVLKRAEIARVQQSVSTQEVDAAYARFAAGNKLSTEQLGKILDQSGVGIE 123
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDN 190
HFKQY+A+Q WP VV + ++ + EY ++ V+F IP++
Sbjct: 124 HFKQYIAVQMSWPRVVNFRYGSASRLSGGDLVKRMMEGGGNKPVTTEYFLQQVIFVIPES 183
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
K KR +A SR + P C + FA+ DVSI +L L ++ L+
Sbjct: 184 K--RGAITAKRQAEANASRSQFP-GCETSKAFAANYRDVSIRSLGRVLAQQLPEDWKPLV 240
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK----IEKHEAEYV 305
+K+ TT VT+KGVEY+AIC KR + + A + A++ K + + +Y+
Sbjct: 241 EKAGDGTTTGTRVTEKGVEYLAICKKRQVNDDAAAEVVFRAEDIGKKKAGGEDPNSEKYL 300
Query: 306 KKLRSNAII 314
++LRS A I
Sbjct: 301 EELRSKAQI 309
>gi|148255225|ref|YP_001239810.1| hypothetical protein BBta_3828 [Bradyrhizobium sp. BTAi1]
gi|146407398|gb|ABQ35904.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 312
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 62/310 (20%), Positives = 133/310 (42%), Gaps = 12/310 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKS---WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++ + C + +++ + A + I +NG+ ITD DI +R+ L L +
Sbjct: 5 FSSRLRALAICSLAVLASGAGLIPAQAQSIVVMVNGDPITDYDIEQRMKLNFLSTRKQQS 64
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ + ELI + +K +E +K G+ ++ V+ F L+AE + L+ QG+
Sbjct: 65 RQEVINELIDDKVKIKEGKKFGVEPTASDVDQSFAGMGSRMRLNAEQLTKSLESQGVRPE 124
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLE-----MEIPANKQKMKNITVREYLIRTVLFSI 187
K + + +W +V+ + + + A + EY ++ ++ +
Sbjct: 125 TLKARIKAEIVWTSLVRGRYKERLLVSDKDVAAAVAAAGGDSDQQGQAFEYKMQPIVLIV 184
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
++ NQ ++ R K+AE R R+ + C + I + +D+ P +
Sbjct: 185 SNS--SNQAVMEARHKEAEALRARV-QTCADANNVFKTTANAVIKEIVVKTSADIPPNLR 241
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
LL + + T P T++G++ +A+C + + K + + K E Y++
Sbjct: 242 KLLDDTPIGHLTPPEATKQGIQMVALCARTPTTVDTPKKRQIREEMYTKKYEATSKAYLQ 301
Query: 307 KLRSNAIIHY 316
++R A+I Y
Sbjct: 302 EVRKAAMIEY 311
>gi|39936127|ref|NP_948403.1| hypothetical protein RPA3064 [Rhodopseudomonas palustris CGA009]
gi|192291845|ref|YP_001992450.1| SurA domain [Rhodopseudomonas palustris TIE-1]
gi|39649981|emb|CAE28505.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
gi|192285594|gb|ACF01975.1| SurA domain [Rhodopseudomonas palustris TIE-1]
Length = 308
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 64/287 (22%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
+ + + +NGE IT+ DI +R L ++ + + +++LI E +K +E +K
Sbjct: 25 TTQGQAQSVVVMVNGEPITNFDIDQRSKLNRMSH-KADSRQQVLEDLIDEKVKIKEAKKY 83
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ + ++ F A +S ++ L QGI + K + + +W +V+ F
Sbjct: 84 GVNPSDSDIDSSFSTMASRMRMSTAQMTNMLAAQGIRPDTLKSRIRAEMVWASLVRGRFK 143
Query: 154 LKYGNLEMEIPANKQKM---KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
E E+ A + K + EY +R V+ + + + R K+AE+ R
Sbjct: 144 DSLQVSEREVQAQLKGGDDTKAVESFEYQLRPVVMIVSRGSVSES--LDARRKEAEQLRG 201
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
R+ C + ++ + + +I +DL P + +L K+ + T P VT++G+E
Sbjct: 202 RIS-SCAEADRVFKAMPNAAIRGIVIKTSADLPPALREILDKTPVGHLTPPEVTKQGIEM 260
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+A+C+++ + K + + K + EY++++R A+I Y
Sbjct: 261 VALCERKQSTADTPRKREIREKLFGEKFQAKSKEYLQEVRKAAMIEY 307
>gi|110634111|ref|YP_674319.1| putative survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase SurA) [Mesorhizobium sp. BNC1]
gi|110285095|gb|ABG63154.1| putative survival protein surA precursor (peptidyl-prolyl cis-trans
isomerase SurA) [Chelativorans sp. BNC1]
Length = 312
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 138/288 (47%), Gaps = 7/288 (2%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90
+ ++ IR +N IT DI +R ALL+L + G + ++A +E+I +TL++QE+
Sbjct: 25 AATILPVDATEIRYVVNDRPITSFDIERRAALLRLMQRKGNVNELAAEEMIDQTLRQQEM 84
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+SG+ V+ + A + ++ L + G+G HFK+++ Q W V+++
Sbjct: 85 ARSGVNITQAMVDESYRNFAGSNNMTVAQLDQILGQAGVGKEHFKEFIRTQIGWGRVMQS 144
Query: 151 DFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
E ++ +Q + T EY+++ V+F +P Q + KR ++A+
Sbjct: 145 RSRSGTILSEQDVVQKMLQQGGQKPTATEYMLQQVIFVVP--AAQRGQLLAKRKREAQAM 202
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGV 267
R R C +FA + DV++ +L +L P++++ + + N T T++GV
Sbjct: 203 RDRF-NGCANTVQFAKGLIDVTVRDMGRVLAPELPPEWKDQISNTRPGNATPIRETERGV 261
Query: 268 EYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAII 314
E+I IC R++ + + Q E EY+ +LR A I
Sbjct: 262 EFIGICSAREVSDDHVARMVFQSQQAGDGSFEDAAKEYMAELRKKARI 309
>gi|146340301|ref|YP_001205349.1| hypothetical protein BRADO3324 [Bradyrhizobium sp. ORS278]
gi|146193107|emb|CAL77118.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 287
Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 9/286 (3%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
A + I +NG+ ITD DI +R L L + + + ELI + +K +E +K G+
Sbjct: 4 AHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVE 63
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
S+ ++ F L+AE + L+ QG+ KQ + + +W +V+ + +
Sbjct: 64 PSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERL 123
Query: 157 GNLE-----MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ A + EY ++ V+ +P++ NQG ++ R K+AE R R
Sbjct: 124 FVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNS--SNQGAMEIRQKEAEALRGR 181
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+ + C + + + + +D+ P + LL + + T P T++G++ +
Sbjct: 182 V-QSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV 240
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
A+C + + + Q K E Y++++R A+I Y
Sbjct: 241 ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEY 286
>gi|90419499|ref|ZP_01227409.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336436|gb|EAS50177.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 346
Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats.
Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 8/302 (2%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
+ + + S +S I+ +NG IT I +R A L+L+++ G + A
Sbjct: 45 AFVLAGSAAATLPATTVSVQAASEIKAVVNGMPITSYQIRQRAAFLQLRRVGGNATQKAT 104
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
ELI E LKKQEI + GI V+ F + A L+ E L + G + FK Y
Sbjct: 105 DELIDEALKKQEIGRRGIAIPDEAVDEAFGRFAAENKLTREQLGQVLSRAGFSSDGFKDY 164
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANK--QKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ +Q W V+ + E ++ Q + + EY ++ V+F IPD Q
Sbjct: 165 IRVQMGWGQAVQANMRSTERLSEQDVVQRMLAQGGEKPSTTEYTLQQVIFVIPD--AQRS 222
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
+ +R ++AE R R + C +FA + DV++ + + +L P+++ ++ +
Sbjct: 223 ALMAQRKREAESMRSRF-QSCESTYEFAKGLRDVTVRDLGRVAQPELPPRWKKDIQATSV 281
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE--YVKKLRSNA 312
TT T++GVE+IA+C+ R++ + A A+ E+ E + Y+KKLR A
Sbjct: 282 GRTTPAQATERGVEFIAVCNTRNISDDKAAALVFQAREMEKLGEQAEPDAAYLKKLRDRA 341
Query: 313 II 314
I
Sbjct: 342 QI 343
>gi|325292484|ref|YP_004278348.1| survival protein surA precursor / peptidyl-prolyl cis-trans
isomerase SurA [Agrobacterium sp. H13-3]
gi|325060337|gb|ADY64028.1| putative survival protein surA precursor / peptidyl-prolyl
cis-trans isomerase SurA [Agrobacterium sp. H13-3]
Length = 315
Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 85/293 (29%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 28 VPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ + + S A + S ++ +N IT+ DI++R+A LKLQ+ +G L + A ++L+ E LK
Sbjct: 23 MAVAPFASQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLAEKAREQLVDEALK 82
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
++EI + ++ + V+ F + A N ++ + + L K G+G +HFK ++A+Q WP
Sbjct: 83 REEIGRVKMSVSTQEVDAAFARFAANNKMNPQQLTQILSKAGVGADHFKAFIAVQMSWPR 142
Query: 147 VVKNDFMLKYGNLEMEIPANKQ-KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+V + + ++ + + EY ++ V+F IP++K KR +A
Sbjct: 143 LVNARYGARGKMSNQDLVTRLRERGDKPVTTEYFLQQVIFVIPESK--RNAITGKRKAEA 200
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
E SR R P C++ FA+ + DV+I +L +L +++ L++K++ TT VT+
Sbjct: 201 EASRKRYP-GCDQAMTFAATMRDVAIKDLGRILAPELPEEWKPLVEKTKEGGTTGTRVTE 259
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEK-HEAEYVKKLRSNAII 314
KGVEY+AIC +R + + A + ++ E +E +Y+ +LR A I
Sbjct: 260 KGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKGGENPNEKKYMDELRKKAQI 312
>gi|319784426|ref|YP_004143902.1| SurA domain [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170314|gb|ADV13852.1| SurA domain [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 309
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 16/309 (5%)
Query: 15 LLTTYFVLIIFCI-VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
L + F L++ V I A +S I+ +N +T GDI+ R A LKLQ+ G+
Sbjct: 5 LFSAGFALLVAATSVSITVMAPPAFASEIKYVVNDIPVTTGDIAHRAAFLKLQRKKGD-- 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A QE+I +TL+ E ++ GI V+ + + A + + ++K G+ +H
Sbjct: 63 --AGQEMIDQTLRMAEAKRLGIRISDAQVDAAYQRFASSNKMQLSQLDGVMEKSGVTKSH 120
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYG---NLEMEIPAN--KQKMKNITVREYLIRTVLFSIP 188
FK+++ Q W + + G E ++ ++ + EY+++ V+F +P
Sbjct: 121 FKEFIRAQMAWNQALSARYRSGDGTGAVSEQDLVRKMLEKGGAKPSATEYMLQQVIFVVP 180
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ + KR ++A+ R R CN +FA + DV++ +L L P +
Sbjct: 181 --AAERSATLGKRKREADAMRARF-NGCNTTREFAKGLIDVTVRDLGRVLAPQLPPDWAE 237
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP--TKIEKHEAEYV 305
+K ++ T T++GVE+I IC R++ + + A+ + + +YV
Sbjct: 238 QIKATKVGGATVTRETERGVEFIGICSSREVSDDKVAQMAFQAEGSGGDKDADALSKKYV 297
Query: 306 KKLRSNAII 314
+L++ A I
Sbjct: 298 DELKAKARI 306
>gi|27379215|ref|NP_770744.1| hypothetical protein bll4104 [Bradyrhizobium japonicum USDA 110]
gi|27352366|dbj|BAC49369.1| bll4104 [Bradyrhizobium japonicum USDA 110]
Length = 313
Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+ + + I +NG+ ITD DI +R L L + + ELI + +K +E +K G
Sbjct: 27 TPSRAQNIVVMVNGDPITDFDIDQRSKLDLLTTQKTPSRQEVINELIDDRVKLKEGKKYG 86
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + +N F A+ ++ + + L+ +G+ K + + +W +V+ F
Sbjct: 87 VDPGVSDINQSFEGMAQRMRITTDQLTKSLEVKGVRPETLKARMKSEMVWTSLVRGRFKE 146
Query: 155 KYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
K E ++ Q I EY ++ ++ +P + F + R+K+AE+ R
Sbjct: 147 KLMVGERDVAQAVQAQAGDKLQIEGTEYKMQPIVLIVPRG--SSPAFQETRMKEAEQYRS 204
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
R+ C + + +I ++ ++L + +L + + T P VT+ G+E
Sbjct: 205 RV-ASCEEANSLFRSTPNATIRESVTKTTAELPEALRKVLDDTPIGHLTAPEVTKAGIEM 263
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ +C ++ + K + + K EK + Y+ +LR A+I Y
Sbjct: 264 VVLCSRKPTMIDTPKKREVREKMYQEKYEKTQKAYLDELRKAAMIEY 310
>gi|254473455|ref|ZP_05086852.1| SurA N-terminal domain family protein [Pseudovibrio sp. JE062]
gi|211957571|gb|EEA92774.1| SurA N-terminal domain family protein [Pseudovibrio sp. JE062]
Length = 313
Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 16/311 (5%)
Query: 18 TYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--NG 70
T F +F I++ S +S+I +NG IT ++ +R L+ L +
Sbjct: 4 TRFCASLFVAASILAPVGPMLTSAEAASKIVAVVNGRPITSYELQQRSKLISLTTRAPSS 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ A ELI E LK E ++ G++ + V+ F A+ +S F L + G+
Sbjct: 64 IAKRKAKDELIDEALKLAEAKRVGVSISDSKVDDAFATIAQRVKMSPSQFKQALSQSGVN 123
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-----ITVREYLIRTVLF 185
K L + W +VV F E ++ A Q +N T EY ++ ++F
Sbjct: 124 PRTLKSRLRAEISWSEVVMQRFRATVRINESDVIAALQGRENKDDSGATSVEYDLQRIIF 183
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
IP N ++ F KR+ + ++ R R C + + AS +++V + LE+DL P
Sbjct: 184 VIPKN--SSKTFKNKRVSEMKKLRARF-TSCEEGTRLASGLNEVVVRPIGKRLETDLPPA 240
Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F + L + S T P G E IA+C K + + ++ + + K ++ Y
Sbjct: 241 FVKKLNEISIGRVTAPTPVDSGFEMIALCGKETINSDATARSTIEGELRNKKGQQLSRRY 300
Query: 305 VKKLRSNAIIH 315
++ LRSNA+I
Sbjct: 301 LRDLRSNAVIE 311
>gi|163759133|ref|ZP_02166219.1| hypothetical protein HPDFL43_05195 [Hoeflea phototrophica DFL-43]
gi|162283537|gb|EDQ33822.1| hypothetical protein HPDFL43_05195 [Hoeflea phototrophica DFL-43]
Length = 283
Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 145/281 (51%), Gaps = 6/281 (2%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+S I+ +N + IT DI++R+A L+LQ+ G L+ A ++LI E+LK QE +
Sbjct: 2 AASEIKIVVNKQAITSVDIARRVAFLRLQRTGGNLQAKAREQLIEESLKYQEALRIRAVV 61
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
++ + + ++ LS + + L++ G+ HFK ++ +Q WP VV+ G
Sbjct: 62 SQAQIDASYARFGKSNNLSVKQLNQVLNQAGVTPQHFKDFIRVQMSWPRVVQALEGTSGG 121
Query: 158 NLEMEIPANK---QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + +K + + EY+++ V+F +P NK N + R ++AE+ R R +
Sbjct: 122 GMSTQDLVSKMLERGDDKPSTTEYILQQVIFVVPSNKRSN-ATLNARKREAEQLRGRY-Q 179
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
C + + DV++ +++ L P ++ L++K++ TT +T +GVE+I IC
Sbjct: 180 GCENAAAAVTGLRDVTLRNLGRIMQPQLPPDWKPLIEKTEAGATTPTRITDRGVEFIVIC 239
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + + A + A+N+ + +++ KLR +A+I
Sbjct: 240 SSKTVSDDRAAELVFRAENSDAGDSETAKKHLAKLRESAVI 280
>gi|158425946|ref|YP_001527238.1| hypothetical protein AZC_4322 [Azorhizobium caulinodans ORS 571]
gi|158332835|dbj|BAF90320.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 302
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 61/305 (20%), Positives = 136/305 (44%), Gaps = 8/305 (2%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ + + ++ C + + +++ ++G+ IT D+++R+ L +L + +K
Sbjct: 1 MTSAFRRFLLVCALALPVLAPGVALAQVLVMVSGQPITSNDVAQRMKLHQLIENKSPPQK 60
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
++ELI E +K + + I D + VN F A +G +A+ ++ + G+ F
Sbjct: 61 QVLEELIDEKIKVLQAARFSIEADEDDVNRMFSNIAERSGRTADQLTASFAQSGLKVQTF 120
Query: 135 KQYLAIQSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKNI-TVREYLIRTVLFSIPDNKL 192
K L +W V+ ++ + ++ NKQ + T EY++R ++ +
Sbjct: 121 KDKLRADYVWGQYVRARAPVVNIRDSDVIAALNKQGNADAFTATEYVLRPIILVVGGG-- 178
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
R+ +A R + C+ + + + + L S++ + + +L K
Sbjct: 179 --SNAYGSRLAEANALRAKF-NGCDAGLQMIKGMKETVVRSPINRLSSEIPEKMRAVLDK 235
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
++ T P V+Q GVE A+C+KR + GE + K + + + + ++ + +LR
Sbjct: 236 TEVGRLTPPEVSQSGVETFAVCEKRTVKGESSKKRDIKDELSNAQFQEQSKRMMAELRKT 295
Query: 312 AIIHY 316
+I Y
Sbjct: 296 MLIQY 300
>gi|154246774|ref|YP_001417732.1| putative peptidyl-prolyl cis-trans isomerase SurA [Xanthobacter
autotrophicus Py2]
gi|154160859|gb|ABS68075.1| putative peptidyl-prolyl cis-trans isomerase SurA [Xanthobacter
autotrophicus Py2]
Length = 303
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 67/283 (23%), Positives = 130/283 (45%), Gaps = 7/283 (2%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
A + +I +NG+ IT D+S+R + ++ + + A+++LI E +K Q+ + +
Sbjct: 23 PAQAQQIIVMVNGDPITTFDVSQRQLMHQMIERKSVSAQQALEDLIDERIKIQQAIRLKM 82
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM-L 154
+ V+ + A +G + E + +QG+ D FKQ L +W V+ +
Sbjct: 83 EVEQKDVDRLYASVAERSGRTPEQLTEGFKQQGLNDRTFKQKLFADYVWGQYVRARSGTV 142
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ K+ + EY + ++F +P N R+ +A R R
Sbjct: 143 NVRDADVVAALQKRGETQMIATEYTLMPIVFVVPRNAGNYAA----RLAEANALRGRF-T 197
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
DC+ + + +V + L S++ PQ + +L K++ T P V Q GVE AIC
Sbjct: 198 DCDAGAQTVKSLKEVVVRPKVTRLSSEMPPQLRQILDKTEIGRLTPPEVAQSGVETFAIC 257
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
KR++ GE A K + + + + +++ +LR ++I Y
Sbjct: 258 GKREVRGESAQKKEIKDELSNAQFAAESKKFMAELRKQSLIEY 300
>gi|307946740|ref|ZP_07662075.1| SurA N- domain family [Roseibium sp. TrichSKD4]
gi|307770404|gb|EFO29630.1| SurA N- domain family [Roseibium sp. TrichSKD4]
Length = 291
Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKK 87
+ + S+ I+ +NG+ IT DI++R L++L + + + A +ELI + L+
Sbjct: 1 MGGFGLTPASAGIKVVVNGKPITTYDINQRAKLIRLIQRSSVAASRREAEKELIDDRLRL 60
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+E + G+ VN + ARN L+ ++ L + G+ K L Q +
Sbjct: 61 EEASRIGVKISEAEVNNAYANIARNVKLTPAKLTAGLRQSGVNPQTLKDRLKAQLAFQQS 120
Query: 148 VKNDFMLKYGNLEMEIPANKQK---MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
V+ F + E +I +K EY ++ V+ +P K ++GF KR+ +
Sbjct: 121 VRRRFNSQVDVDESDIINALRKSDDENKNISVEYNLQRVIVVVP--KKSSKGFRNKRLAE 178
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVT 263
+ R + C+ K +V + LE++L P + + K + T+P T
Sbjct: 179 SNSIR-KAVTACDSAGAVFGKYSEVVVQPIGRRLETELPEPMRKEISKTTPGKLTSPRKT 237
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ G E IA+C KR++ +IA + L + + E Y+ LR A I Y
Sbjct: 238 EVGFEMIAVCGKREIASDIAARTELENELRAKEGEALTRRYLMDLRRRASIVY 290
>gi|298291093|ref|YP_003693032.1| SurA domain protein [Starkeya novella DSM 506]
gi|296927604|gb|ADH88413.1| SurA domain protein [Starkeya novella DSM 506]
Length = 326
Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats.
Identities = 64/311 (20%), Positives = 126/311 (40%), Gaps = 9/311 (2%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+ V + + ++ A + I + G+ IT D+++RI L +L +
Sbjct: 18 IAERAARTLVAGMVAACALAAFPGAASAQGILVMVQGQPITSFDVAQRIKLAQLTERLSL 77
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+++LI E LK E+ G+T D + + F + A +G + + + L + G+
Sbjct: 78 SQKQALEDLIDERLKIITAERGGVTADKDEIEKMFARMANRSGRTPDQLTQALTQSGLDA 137
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-----MKNITVREYLIRTVLFS 186
K + +W V+ + + ++ A Q K EY IR V+
Sbjct: 138 RMLKTKMRADYVWNSYVRGRYSSAATVRDSDVFAALQTKGEDLTKAQRTTEYTIRQVVLV 197
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ + N +R+ +A R C+ + + + +D+
Sbjct: 198 V--GRTANPAQRSQRMAEANSLRKSF-TSCDGGVATVRGMREAVVRDPVIRTSADMSEGV 254
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ ++ + T P VT+ G+E +AIC +R++ GE A K + A + E +
Sbjct: 255 RKVMDSTPVGQLTPPEVTRAGIEMVAICARREVVGESAQKREVRADLETKQFEAVSKRLL 314
Query: 306 KKLRSNAIIHY 316
+ R A+I Y
Sbjct: 315 AEARKGAMIQY 325
>gi|114704782|ref|ZP_01437690.1| survival protein sura precursor (peptidyl-prolyl cis-trans
isomerase sura) [Fulvimarina pelagi HTCC2506]
gi|114539567|gb|EAU42687.1| survival protein sura precursor (peptidyl-prolyl cis-trans
isomerase sura) [Fulvimarina pelagi HTCC2506]
Length = 308
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 9/274 (3%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
NG +T I +R A LKL+++ G + A ELI E LK+QEI++ G+ VN +
Sbjct: 35 NGMPVTTYQIRQRAAFLKLRRVGGNTTQKATDELIDEALKRQEIQRQGVNIPDEEVNAAY 94
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ A+ LS + L G FK Y+ +Q W + E +
Sbjct: 95 LNFAKGNNLSEAQLAEVLGSAGFSPQAFKDYIRVQMGWGQAASRRIQREERLTEQDAVQR 154
Query: 167 K--QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
Q + + EY ++ V+F IP+ Q + R ++A+ R R + C+ FA
Sbjct: 155 MLAQGGEKPSTTEYTLQQVIFVIPNG--QRGAMLANRKREAQAMRQRF-QSCDSTLAFAQ 211
Query: 225 KIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ DV++ + + +L ++ ++++ S T T +GVE+I +C+ R + + A
Sbjct: 212 GLRDVTVRDLGRVAQPELPSLWKEDVMQTSPGRATPTKETDRGVEFIGVCNARQISDDRA 271
Query: 284 LKAYLSAQNT---PTKIEKHEAEYVKKLRSNAII 314
+ A++ +A +KKLR A I
Sbjct: 272 AQMVFQARDMESLNGDGSGADAALLKKLRDEAQI 305
>gi|328544014|ref|YP_004304123.1| SurA N-terminal domain family protein [polymorphum gilvum
SL003B-26A1]
gi|326413758|gb|ADZ70821.1| SurA N-terminal domain family protein [Polymorphum gilvum
SL003B-26A1]
Length = 307
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 66/285 (23%), Positives = 135/285 (47%), Gaps = 9/285 (3%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGI 95
+ I+ +N + IT DI++R L+ L + ++A +EL+ + LK +E ++ GI
Sbjct: 25 AQTSIKVVVNEQAITSYDIAQRARLITLTQRKSGETARRMAQEELVDDVLKLKEAQRIGI 84
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ V+ F A+ +S + ++ L + G+ + + L + W V F +
Sbjct: 85 SVSKGDVDDAFASIAQRVKMSPANLAAALRQSGVDPDTLRARLRAEVAWSRAVGQRFRAQ 144
Query: 156 YGNLEMEIPANKQKMK---NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ ++ A QK + E+ +R V+F +P + G +R ++A++ R
Sbjct: 145 VKVSDSDVIAALQKSEDKNKNLSIEFELRQVIFVVPQKA--SSGLKAQRKREADQFRKEF 202
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271
C A +++V + + LE++L P ++ + K++ T P T +G+E IA
Sbjct: 203 -TSCETGAAQARTLNEVVVRAIGHRLETELPPALRDTIVKTEVGRLTPPEQTSRGLEMIA 261
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+C KR++ +IA + + + + E+ Y+++LR A I Y
Sbjct: 262 VCGKREIQSDIAARTAIEDELRQKEGEQMSRRYLQELRRRATIEY 306
>gi|254503520|ref|ZP_05115671.1| SurA N-terminal domain family [Labrenzia alexandrii DFL-11]
gi|222439591|gb|EEE46270.1| SurA N-terminal domain family [Labrenzia alexandrii DFL-11]
Length = 314
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+ + I+ +N ITD DI++R L L L+K + AVQELI + +K E + G
Sbjct: 31 SADAAIKVIVNDVPITDYDITQRARLITLTLRKSASVARREAVQELIDDQVKVGEATRMG 90
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
++ + V+ + ARN L+ + L + G+ K+ L Q IW +V+ F
Sbjct: 91 MSVSDSEVDNAYANIARNVKLTPARLTQALGQGGVRAETLKKRLRAQLIWGKLVRARFSG 150
Query: 155 KYGNLEMEIPANKQK---MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
E +I A +K T EY ++ V+ +P N + GF +R ++ + R +
Sbjct: 151 GVDVDESDIIAALRKTDEEDRATSIEYDLQRVIVVVPKN--SSNGFKSQRRREIAQMR-K 207
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI 270
C + + +V + LE+++ P + +KK T+P T G E I
Sbjct: 208 AVSSCEDMGSVLGQYKEVVVQPIGRRLETEIPPNIIDQVKKLGPGKLTDPNPTPVGFEMI 267
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
AIC KR++ +IA++ L + + E + + + I Y
Sbjct: 268 AICGKREIQSDIAMRTKLENELRAKEGESQARRLLMDAKRRSTIIY 313
>gi|148827655|ref|YP_001292408.1| thymidylate kinase [Haemophilus influenzae PittGG]
gi|148718897|gb|ABR00025.1| thymidylate kinase [Haemophilus influenzae PittGG]
Length = 311
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 5 VLRSFLLATLGC----VAFTSMAQAAERVVATVDGIPILESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V G E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIGVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF + +K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQIVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATKDWVKALRKRANIQYF 309
>gi|68249060|ref|YP_248172.1| survival protein SurA-like protein [Haemophilus influenzae
86-028NP]
gi|68057259|gb|AAX87512.1| survival protein SurA homolog [Haemophilus influenzae 86-028NP]
Length = 313
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 7 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPILESQVRANMG------KKGD-R 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ I++SG+ D ++ A GL+ F LD QGI N
Sbjct: 56 QSALDKIIDDLLVQKAIQESGVKIDPREIDRVVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 234 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 291
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 292 QDATNDWVKALRKRANIQYF 311
>gi|260582276|ref|ZP_05850069.1| stationary-phase survival protein SurA [Haemophilus influenzae
NT127]
gi|260094644|gb|EEW78539.1| stationary-phase survival protein SurA [Haemophilus influenzae
NT127]
Length = 313
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 7 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPILESQVRANMG------KKGD-R 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 56 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTRAEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 291
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 292 QDATNDWVKALRKRANIQYF 311
>gi|319775614|ref|YP_004138102.1| survival protein SurA [Haemophilus influenzae F3047]
gi|317450205|emb|CBY86421.1| survival protein SurA homolog [Haemophilus influenzae F3047]
Length = 311
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 5 VLRSFLLAALGC----VAFASMAQAGERVVATVDGIPILESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|301169179|emb|CBW28776.1| survival protein SurA homolog [Haemophilus influenzae 10810]
Length = 311
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 5 VLRSFLLAALGC----VAFASMAQAGERVVATVDGIPILESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|329122338|ref|ZP_08250925.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC
11116]
gi|327473620|gb|EGF19039.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC
11116]
Length = 313
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 7 VLRSFLLAALGC----VAFASMAQAGERVVATVDGIPILESQVRANMG------KKGD-R 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 56 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 291
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 292 QDATNDWVKALRKRANIQYF 311
>gi|16272406|ref|NP_438619.1| stationary-phase survival protein SurA [Haemophilus influenzae Rd
KW20]
gi|260580479|ref|ZP_05848307.1| stationary-phase survival protein SurA [Haemophilus influenzae
RdAW]
gi|1174486|sp|P44721|SURA_HAEIN RecName: Full=Chaperone surA homolog; Flags: Precursor
gi|1573432|gb|AAC22116.1| stationary phase survival protein SurA, putative [Haemophilus
influenzae Rd KW20]
gi|260092821|gb|EEW76756.1| stationary-phase survival protein SurA [Haemophilus influenzae
RdAW]
Length = 313
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 7 VLRSFLLATLGC----VAFTSMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 56 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 291
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 292 QDATNDWVKALRKRANIQYF 311
>gi|229846544|ref|ZP_04466652.1| stationary-phase survival protein SurA [Haemophilus influenzae
7P49H1]
gi|229810637|gb|EEP46355.1| stationary-phase survival protein SurA [Haemophilus influenzae
7P49H1]
Length = 311
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 5 ILKSFLLATLGC----VAFASMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVVKSKQGVVSAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|309972385|gb|ADO95586.1| Putative survival protein SurA-like protein [Haemophilus influenzae
R2846]
Length = 313
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G I + + + G+
Sbjct: 7 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPILESQVRANMG------KKGD-R 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ I++SG+ D ++ A GL+ F LD QGI N
Sbjct: 56 QSALDKIIDDLLVQKAIQESGVKIDPREIDRVVEDTAARNGLTYGQFLDALDYQGISLNT 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 116 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLDEAKSQGTAQKVTGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + D G++ +AY + T++
Sbjct: 234 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVSD--GDLTAEAYTQKAYERLVNTQL 291
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 292 QDATNDWVKALRKRANIQYF 311
>gi|145630363|ref|ZP_01786144.1| stationary-phase survival protein SurA [Haemophilus influenzae
R3021]
gi|144984098|gb|EDJ91535.1| stationary-phase survival protein SurA [Haemophilus influenzae
R3021]
Length = 311
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 5 VLRSFLLATLGC----VAFTSMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNT 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|148825262|ref|YP_001290015.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittEE]
gi|148715422|gb|ABQ97632.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittEE]
Length = 311
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 5 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|304392008|ref|ZP_07373950.1| survival protein SurA [Ahrensia sp. R2A130]
gi|303296237|gb|EFL90595.1| survival protein SurA [Ahrensia sp. R2A130]
Length = 343
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 70/298 (23%), Positives = 120/298 (40%), Gaps = 14/298 (4%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87
P V+ + +RI +N IT DI++R ++L+++ G IA ELI E +K
Sbjct: 48 APKVATINKRGGTRIAVLVNETPITSTDIARRAKFVRLRRMKGNATTIATNELIDEAIKM 107
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+E + V+ + A+N L+ L + G FK Y+ W
Sbjct: 108 KEARRINAVASDAEVSSAYAGFAKNNKLTQPQLGQVLSRSGTTVRGFKDYIRASLSWQRA 167
Query: 148 VKNDFMLKYGNLEMEIPANKQ-------KMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V + + K + EY ++ ++F +P +K G +
Sbjct: 168 VGSRMRAEASGRGGLGEKAKGPRFLSSAGTQGAKEGEYTLQQIVFVVPSDKR---GQLSA 224
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259
R A + R R+ C + A + DVS+ LL+S L PQ+ ++ S+ T
Sbjct: 225 RRAQANQFRTRM-NGCTNALELAKSLRDVSVRDRGRLLDSQLPPQWAKEIRALSEGGVTR 283
Query: 260 PYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T KGVE +A+C KR++ N + + E +Y+ +L+ A I
Sbjct: 284 TKDTDKGVEMLALCRKREVRASTSSTSADLFGGANFAEQQSETEKKYLAELKERATIQ 341
>gi|319898023|ref|YP_004136220.1| survival protein sura homolog [Haemophilus influenzae F3031]
gi|317433529|emb|CBY81912.1| survival protein SurA homolog [Haemophilus influenzae F3031]
Length = 311
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 5 ILKSFLLATLGC----VAFASMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVMKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATKDWVKALRKRANIQYF 309
>gi|145632724|ref|ZP_01788458.1| thymidylate kinase [Haemophilus influenzae 3655]
gi|145634545|ref|ZP_01790254.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittAA]
gi|229844382|ref|ZP_04464522.1| stationary-phase survival protein SurA [Haemophilus influenzae
6P18H1]
gi|144986919|gb|EDJ93471.1| thymidylate kinase [Haemophilus influenzae 3655]
gi|145268090|gb|EDK08085.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittAA]
gi|229812631|gb|EEP48320.1| stationary-phase survival protein SurA [Haemophilus influenzae
6P18H1]
Length = 311
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 32/320 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 5 ILKSFLLATLGC----VAFASMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + + +EY +R +
Sbjct: 114 FRQQIANQMVMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|113461696|ref|YP_719765.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Haemophilus somnus
129PT]
gi|112823739|gb|ABI25828.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Haemophilus somnus
129PT]
Length = 314
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 24/315 (7%)
Query: 20 FVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
F ++F I+ ++S A + R+ T++G I + + +L + N E +IA+
Sbjct: 6 FKAVLFSIIGLLSITITAQAAERVVATVDGNPILESQVK---KVLGKRANNEENRQIALN 62
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I + L ++ I++ GI V+ A GL+ F LD QGI ++Q +
Sbjct: 63 SIIDDLLVQKAIQELGIKVAPAHVDSVIENIAAQNGLTFGQFLDVLDYQGINYQAYRQQI 122
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIP----------ANKQKMKNITVREYLIRTVLFSIP 188
A Q + +V EI + K K +T EY +R +L +
Sbjct: 123 AYQILISEVRNQAIGSSVNVTREEIQDLGLKLFKQAKKQGKEKKVTAPEYNVRHILLKLN 182
Query: 189 D--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
N Q + + + D +++ K K + G ++ P+F
Sbjct: 183 PLLNDAQAKAKLTQIRADILANKITFADAALKYSKDY--LSGADGGSLGFMFPEAYVPEF 240
Query: 247 QNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QNTPTKIEKHEA 302
+++ S + + P+ T+ G + + D R+ +I +AY+ Q ++++
Sbjct: 241 AKVIRASKKGVISTPFKTEFGWHILEVTDIRN--ADITREAYMQEAYQQIVNQQLQEASG 298
Query: 303 EYVKKLRSNAIIHYY 317
+++K LR A I Y+
Sbjct: 299 DWIKALRKRAHIQYF 313
>gi|170718609|ref|YP_001783810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus
2336]
gi|168826738|gb|ACA32109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus
2336]
Length = 321
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 24/315 (7%)
Query: 20 FVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
F ++F I+ ++S A + R+ T++G I + + +L + N E +IA+
Sbjct: 13 FKAVLFSIIGLLSITITAQAAERVVATVDGNPILESQVK---KVLGKRANNEENRQIALN 69
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I + L ++ I++ GI V+ A GL+ F LD QGI ++Q +
Sbjct: 70 SIIDDLLVQKAIQELGIKVAPAHVDSVIENIAAQNGLTFGQFLDVLDYQGINYQAYRQQI 129
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIP----------ANKQKMKNITVREYLIRTVLFSIP 188
A Q + +V EI + K K +T EY +R +L +
Sbjct: 130 AYQILISEVRNQAIGSSVNVTREEIQDLGLKLFKQAKKQGKEKKVTAPEYNVRHILLKLN 189
Query: 189 D--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
N Q + + + D +++ K K + G ++ P+F
Sbjct: 190 PLLNDAQAKAKLTQIRADILANKITFADAALKYSKDY--LSGADGGSLGFMFPEAYVPEF 247
Query: 247 QNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QNTPTKIEKHEA 302
+++ S + + P+ T+ G + + D R+ +I +AY+ Q ++++
Sbjct: 248 AKVIRTSKKGVISTPFKTEFGWHILEVTDIRN--ADITREAYMQEAYQQIVNQQLQEASG 305
Query: 303 EYVKKLRSNAIIHYY 317
+++K LR A I Y+
Sbjct: 306 DWIKALRKRAHIQYF 320
>gi|145638627|ref|ZP_01794236.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittII]
gi|145272222|gb|EDK12130.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittII]
Length = 311
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 29/320 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K + F+L V VS R+ T++G + + + + G+
Sbjct: 3 KFVLRSFLLAALGCVAFVSMA--QAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHVVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 114 FRQQIANQMMMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVTGKEYEVRHI 173
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 174 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 231
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 232 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGTRD--GDLTSEAYTQKAYERLVNTQL 289
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 290 QDATNDWVKALRKRANIQYF 309
>gi|309750126|gb|ADO80110.1| Putative survival protein SurA-like protein [Haemophilus influenzae
R2866]
Length = 313
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 29/320 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K + F+L V VS R+ T++G + + + + G+
Sbjct: 5 KFVLRSFLLAALGCVAFVSMA--QAEERVVATVDGIPVLESQVRANMG------KKGD-R 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 56 QSAIDKIIDDILVQKAVQESGVKIDPREIDHVVEDTAARNGLTYGQFLDALDYQGISLNA 115
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTV 183
F+Q +A Q + V E+ A QKM + +T +EY +R +
Sbjct: 116 FRQQIANQMMMGAVRNKAIQESIDVTREEVVALGQKMLEEAKEKGTAQKVTGKEYEVRHI 175
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESD 241
L + N L N +K++ + SK + + G Y
Sbjct: 176 LLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPET 233
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKI 297
PQF Q ++K Q + P+ T+ G + + RD G++ +AY + T++
Sbjct: 234 YAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGTRD--GDLTSEAYTQKAYERLVNTQL 291
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ ++VK LR A I Y+
Sbjct: 292 QDATNDWVKALRKRANIQYF 311
>gi|182677646|ref|YP_001831792.1| hypothetical protein Bind_0653 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633529|gb|ACB94303.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 306
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
+V + + I +ING+ IT+ D+ +R+ +L++ + + A++ L + L+ E
Sbjct: 21 VVVGSTDVQAQTIIASINGDPITNIDVDERMKMLRVLRKPAT-REAAMESLYTDRLETHE 79
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ G+ + V+ A+ + E + L G+ +HFK + + +V
Sbjct: 80 AARYGVKPKDADIGQEIVRVAQEMKVQPEALIAALQNAGVSPDHFKAHFGADLAFGALVG 139
Query: 150 N-DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ ++ E+ +Q K EY +R V+FS+P+N + R ++AE+
Sbjct: 140 ALNKGVEASETEVRKELARQGGKAAAGTEYTLRQVIFSLPNNVA--PAAINARGQEAEQL 197
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
R R DC EK ++DV+I +++ +NLL K+ + T P + G+
Sbjct: 198 RQRF-ADCESGEKMVFALNDVTIRDPIRRTSTEISEGLRNLLDKTPVGHLTPPQRSSAGL 256
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
E IA+C K + AL+ +S + T++ A+ +K++R +A+I
Sbjct: 257 EMIAVCRKGAALDDTALRQQISQKILATRLSADRAKRLKEMRDHAVI 303
>gi|145636275|ref|ZP_01791944.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittHH]
gi|145270440|gb|EDK10374.1| stationary-phase survival protein SurA [Haemophilus influenzae
PittHH]
Length = 290
Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats.
Identities = 64/298 (21%), Positives = 120/298 (40%), Gaps = 27/298 (9%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
R+ T++G + + + + G+ + A+ ++I + L ++ +++SG+
Sbjct: 2 AQAEERVVATVDGIPVLESQVRANMG------KKGD-RQSAIDKIIDDILVQKAVQESGV 54
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
D +++ A GL+ F LD QGI N F+Q +A Q + V
Sbjct: 55 KIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQQIANQMVMGAVRNKAIQES 114
Query: 156 YGNLEMEIPANKQKM----------KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
E+ A QKM + + +EY +R +L + N L N +K++
Sbjct: 115 IDVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLKL--NPLLNDAQAKKQLAKI 172
Query: 206 EESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262
+ SK + + G Y PQF Q ++K Q + P+
Sbjct: 173 RSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYAPQFAQTVVKSKQGVISAPFK 232
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+ G + + RD G++ +AY + T+++ ++VK LR A I Y+
Sbjct: 233 TEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQLQDATNDWVKALRKRANIQYF 288
>gi|217978373|ref|YP_002362520.1| hypothetical protein Msil_2224 [Methylocella silvestris BL2]
gi|217503749|gb|ACK51158.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 315
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 63/281 (22%), Positives = 126/281 (44%), Gaps = 6/281 (2%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
+ I +ING+ IT+ DI +R+ LL++ + + A++ L + L+ E EK G+
Sbjct: 34 PVHAQAIVASINGDPITNIDIDQRMKLLRVLRKPAT-REAAIESLFRDRLQIHEAEKYGV 92
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-DFML 154
++ V+ A L + S L G+ ++ FK Y + +V+ + +
Sbjct: 93 NPRDADISQQIVKTATEMNLQPQALLSALQAAGVSEDQFKSYFRANLAFTVLVQALNKGV 152
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ KQ K Y ++ ++F++P + R K+AE+ R R
Sbjct: 153 EASETQVRAELEKQGGKAAAGTSYTVQQIIFTLPIGTT--PAILAARSKEAEQLRSRF-T 209
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
DC + A ++DV++ +L Q + LL K+ T P + G+E +A+C
Sbjct: 210 DCKSGAEMARTLNDVTVRDQLTRSSHELGEQLRQLLDKTAIGRLTPPQRSTSGLEMVAVC 269
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + A++ ++ + I++ +K+LR A+I
Sbjct: 270 ARGPAKDDTAIRQTIAQKLLAAHIQEDGERRLKELRDRAVI 310
>gi|301155190|emb|CBW14654.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 310
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/317 (18%), Positives = 126/317 (39%), Gaps = 27/317 (8%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+ ++F ++ + ++ R+ T+NG I ++ + ++ A
Sbjct: 3 KSMLKSLLFAMIGLFTFSQVQAEERVVATVNGTPILQSQVNAVMG-------KKGSQRAA 55
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ I++SG+ + VN A GL+ F LD QGI N FKQ
Sbjct: 56 LDKIIDDMLTEKAIKESGVKVNQAEVNRIVEDIAAKNGLTYGQFLDALDYQGISLNAFKQ 115
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
++ Q + V V + + G ++ K + + +EY +R +L
Sbjct: 116 QISRQMLMAGVRNHAIQNSVDVTREQVDALGKQMLDEAKAKGTAQKVMGKEYEVRHILLK 175
Query: 187 IPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+ N Q + +++ + ++ K K + + G Y
Sbjct: 176 LNPLLNDAQAKAELERIRSEIISGKMTFADAALKYSKDY--LSGANGGSLGYAFPEAYVG 233
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKH 300
F +++ + + P+ ++ G + + RD G+ AY Q +++++
Sbjct: 234 PFAKMVETTPQGTISAPFKSEFGWHILEVTGTRD--GDKTEDAYRQKAYEQIVNSQLQEA 291
Query: 301 EAEYVKKLRSNAIIHYY 317
++VK LR NA I Y+
Sbjct: 292 TKDWVKALRKNADIQYF 308
>gi|260912727|ref|ZP_05919213.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Pasteurella
dagmatis ATCC 43325]
gi|260633105|gb|EEX51270.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Pasteurella
dagmatis ATCC 43325]
Length = 311
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 128/312 (41%), Gaps = 28/312 (8%)
Query: 23 IIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I F +V + + + + R+ T+NG + + + G + A+ + I
Sbjct: 10 IFFALVGLFAISTTTQAAERVVATVNGIPVLESQVKANSG------KKGN-RQAALDKAI 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L +Q I+ SG+ + V+ A GL+ F LD QGI N ++Q +A Q
Sbjct: 63 DDILVQQAIQNSGVKVNYAQVDQIIEGIAAQNGLTYGQFLDALDYQGISYNTYRQQIANQ 122
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRTVLFSIPD-- 189
+ +V ++ A K K ++ ++Y +R +L +
Sbjct: 123 LLMTEVRNQAIGQSIDVTREQVEALGKQLLQEAKEKGTEKKVSGKQYEVRHILLKLNPLL 182
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQN 248
N Q + + + D ++ K K + S + S+G A E+ + P +
Sbjct: 183 NDTQAKAQLSQIRADIMAGKMTFADAALKYSKDYLSGANGGSLGFA--FPETYVGPFQKT 240
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYV 305
++ Q + P+ T+ G + + + RD G+ L AY Q ++++ E ++V
Sbjct: 241 VITSKQGVISAPFKTEFGWHILEVTNTRD--GDRTLDAYRQQAYEQLINSQVKDAEKDWV 298
Query: 306 KKLRSNAIIHYY 317
K LR NA I Y+
Sbjct: 299 KALRKNADIQYF 310
>gi|325576844|ref|ZP_08147459.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae
ATCC 33392]
gi|325161050|gb|EGC73168.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae
ATCC 33392]
Length = 310
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 58/317 (18%), Positives = 126/317 (39%), Gaps = 27/317 (8%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+ ++F ++ + ++ R+ T+NG I ++ + ++ A
Sbjct: 3 KSMLKSLLFAMIGLFTFSQAQAEERVVATVNGTPILQSQVNAVMG-------KKGSQRAA 55
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I + L ++ I++SG+ + VN A GL+ F LD QGI N FKQ
Sbjct: 56 LDKIIDDMLTEKAIKESGVKVNQAEVNRIVEDIAAKNGLTYGQFLDALDYQGISLNAFKQ 115
Query: 137 YLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
++ Q + V V + + G ++ K + + +EY +R +L
Sbjct: 116 QISRQMLMAGVRNHAIQNSVDVTREQVEALGKQMLDEAKAKGTAQKVMGKEYEVRHILLK 175
Query: 187 IPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+ + Q + +++ + ++ K K + + G Y
Sbjct: 176 LNPLLDDAQAKAELERIRSEIILGKMTFADAALKYSKDY--LSGANGGSLGYAFPEAYVG 233
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKH 300
F +++ + + P+ ++ G + + RD G+ AY Q +++++
Sbjct: 234 PFAKMVETTPQGTVSAPFKSEFGWHILEVTGSRD--GDKTEDAYRQKAYEQIVNSQLQEA 291
Query: 301 EAEYVKKLRSNAIIHYY 317
++VK LR NA I Y+
Sbjct: 292 TKDWVKALRKNADIQYF 308
>gi|149914655|ref|ZP_01903185.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
AzwK-3b]
gi|149811448|gb|EDM71283.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
AzwK-3b]
Length = 411
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 107/270 (39%), Gaps = 8/270 (2%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKING 70
+ L + + + A + + +N + IT +I +R +L L + G
Sbjct: 3 QFLAALALPAVMATSMSWGIAAPASAQNLFAPVVKVNDQAITGYEIQQRARMLTLFRSPG 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++A ++LI E LK +G+ + + + A ++AE+F L+ G+
Sbjct: 63 NPVELAREQLIEERLKVDAARAAGLVLEDADIRVGMEEFASRANMTAEEFIGALEGAGVS 122
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ +++++ W ++V+ F + + ++ + + + L+ ++ I
Sbjct: 123 EQSYREFVRAGMTWRELVRARFAPRVSVSDADLERARAALTEDSGVRVLLSEIIMPITPQ 182
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-L 249
+ RI + + +P + E++++ G+ ++ ++L PQ + +
Sbjct: 183 DAEEVQDRAARISELDS----IPAFSAEAERYSASATAARGGRLDWMSITNLPPQLRPVI 238
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
L + ++P + V + D +
Sbjct: 239 LALGPGDVSDPLPIEGAVALFQLRDIEETD 268
>gi|152978410|ref|YP_001344039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus
succinogenes 130Z]
gi|150840133|gb|ABR74104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus
succinogenes 130Z]
Length = 317
Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 57/316 (18%), Positives = 120/316 (37%), Gaps = 22/316 (6%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
I + + S A + ++ T+NGE I + + + + + +
Sbjct: 4 GSLKAIALAAMGLFVISSGAQAVKVEQVVATVNGEPILESQLQRVMG---KRANTESNRR 60
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+AV ++I + L ++ +++SG+ + VN A GL+ LD QGI + F
Sbjct: 61 VAVDKIIDDMLVQKAVKESGVKVNPAQVNQIVHNIADQNGLTYGQLLDALDYQGISLSQF 120
Query: 135 KQYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
K ++ Q + +V V + + + ++ K IT +Y R +L
Sbjct: 121 KANISNQILMAEVRNRSIGKGVDVSREQVEELSRKMLQQAKAGGNPKAITATQYKARHIL 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDL 242
+ L N + ++ + K SK + + G + +
Sbjct: 181 LKL--TPLLNDAQAKAQLTQIRADIQSGKTTFAEAAKNYSKDYLSGANGGDLGFAFPENY 238
Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKH 300
P+F ++ Q + P+ T+ G + + D R ++A + ++ ++
Sbjct: 239 VPEFAKMMTTAKQGVISAPFKTEFGWHILEVTDTRQGDITDVAYRQKAYETLVNEQLREY 298
Query: 301 EAEYVKKLRSNAIIHY 316
++VK LR +A I Y
Sbjct: 299 SKDWVKALRKHAEIKY 314
>gi|259419301|ref|ZP_05743218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp.
TrichCH4B]
gi|259345523|gb|EEW57377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp.
TrichCH4B]
Length = 425
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 108/274 (39%), Gaps = 8/274 (2%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-NGELEKI 75
L + +P + + S + T+N +VIT ++ +R L + G+ +
Sbjct: 24 AGGLALAVALTLPAADVGAQGLFSPV-ITVNEDVITTYELQQRARFLTVLGSVQGDPLET 82
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +LI + LK+Q + + G+T + + + A+ LS E+F S L + G+ +
Sbjct: 83 ARNDLIEDRLKRQVMREVGLTLSEDEITEGMRELAQRANLSLEEFLSGLRQAGVDPETVR 142
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + W + ++ F+ + E EI +V+ L +L +N Q Q
Sbjct: 143 DFTSAGLGWREYIRGRFLAQARPSEAEIDRAMGTAGTGSVQVLLSEIILPLTQENAAQIQ 202
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQ 254
+ + E+ +F++ + G+ ++ S L PQ Q +L
Sbjct: 203 ELATQISELKNEAAF-----TASAAQFSASDSSANGGRLPWMSLSRLPPQLQEVVLGLEP 257
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
T P Q + + R++ G A A +
Sbjct: 258 GQITQPLPMQGAIAIFRMRGLREVDGRSASFAAI 291
>gi|52424684|ref|YP_087821.1| SurA protein [Mannheimia succiniciproducens MBEL55E]
gi|52306736|gb|AAU37236.1| SurA protein [Mannheimia succiniciproducens MBEL55E]
Length = 353
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 113/311 (36%), Gaps = 23/311 (7%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ I + ++ T++G I + + + L Q N A+ ++I
Sbjct: 47 LLLVMIGMFAVSVNVQAVEQVVATVDGTPILESQLKR---ALGKQANNATNRAKALDKII 103
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L ++ ++++ + ++ A ++ LD QGIG F+ + Q
Sbjct: 104 DDMLVQKAVKEANVHISEGQLDKIVENIAAQNNMTYGQLLDALDYQGIGITKFRNNIRNQ 163
Query: 142 SIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ +V V + + +E + K +T EY +R +L + N
Sbjct: 164 LMMAEVRNRSIGKNIDVTREQVETLSKQMLEQAKTQGKKAQVTGTEYQVRHILLKL--NP 221
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL 249
L N + ++ K SK + + G Y P F +
Sbjct: 222 LLNDAQAKAQLNQICSDIQSGKTTFAAAAKDYSKDYLSGANGGDLGYAFPEIYDPAFGQV 281
Query: 250 LKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYV 305
+K + + + P+ TQ G + + D R G++ AY +++ ++V
Sbjct: 282 IKATKKGVISAPFKTQFGWHILEVTDTRQ--GDMTEAAYRQKAYETLVNQQLQDDAKDWV 339
Query: 306 KKLRSNAIIHY 316
K LR A I Y
Sbjct: 340 KALRKGAEIKY 350
>gi|15603073|ref|NP_246145.1| hypothetical protein PM1208 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721561|gb|AAK03292.1| SurA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 311
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 61/308 (19%), Positives = 117/308 (37%), Gaps = 28/308 (9%)
Query: 26 CIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84
I+ + Y S A + R+ T+NG + + + K + ++A+ ++I +
Sbjct: 13 AILGLFIYVSTAQAAERVVATVNGVPVLESQVKKNMG-------KKGQYQVALDKVIDDI 65
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L +Q I+ SGI + V+ A GL+ LD QGI N ++Q +A Q +
Sbjct: 66 LVQQAIQNSGIKVNYAQVDQIIEGIAAQNGLTYGQLLDALDYQGISYNAYRQQIANQILM 125
Query: 145 PDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ ++ A K I+ +Y +R +L + N L N
Sbjct: 126 GEIRNQAIGQSIDVTREQVEALSNQLLNQAKQAGTEKKISAPQYEVRHILLKL--NPLLN 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ ++ + SK + + G + FQ +L
Sbjct: 184 DAQAKAQLTQIRADIIAGKMSFADAALHYSKDYLSGANGGSLGFAFPEAYVGAFQKAILT 243
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYVKKL 308
+ + P+ T+ G + + + R+ G+ + Y Q +++ E ++VK L
Sbjct: 244 TKKGVISAPFKTEFGWHILEVTNTRE--GDKTIDVYRQKAYEQLVNQQVKDVEKDWVKAL 301
Query: 309 RSNAIIHY 316
R NA I Y
Sbjct: 302 RKNAEIRY 309
>gi|332288953|ref|YP_004419805.1| peptidyl-prolyl cis-trans isomerase SurA [Gallibacterium anatis
UMN179]
gi|330431849|gb|AEC16908.1| peptidyl-prolyl cis-trans isomerase SurA [Gallibacterium anatis
UMN179]
Length = 313
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 26/312 (8%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
F+L++ C+ ++ +A+ ++ T+NG I + + + L + A+
Sbjct: 7 KFLLLVGCLS--LATTGYAVE-KVVATVNGTPILNSQVKQ---ALGKRADTAANRAAALD 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
++I + L ++ I+ + I+ + Q A GL+ F LD QGIG+ F+Q +
Sbjct: 61 DVIDDMLVQKAIKDAKISVSQQQIQQIMHQIANENGLTYGQFLDALDYQGIGEAKFRQQI 120
Query: 139 AIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
A Q I V V + + K G K +K + +YL+ +L
Sbjct: 121 AHQIIMGQVRNKAISESISVSREQIEKLGKQMYNEAKQKGTLKTVKSPQYLVSHILIKT- 179
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQF 246
N L N +K++ + K SK + + G + P+F
Sbjct: 180 -NPLLNDAQAKKQLSSLRSDIIAGKTTFAAAAKTYSKDYLSGANGGSLDWNFPEVYEPEF 238
Query: 247 QNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEA 302
Q+++K S + + P+ T+ G + + DKRD G+ +AY+ Q + +
Sbjct: 239 QSMVKNSKKGVISQPFKTKYGWHILEVVDKRD--GDKTKEAYMQKAYQQVVNQQAMEASK 296
Query: 303 EYVKKLRSNAII 314
++VK LR +A I
Sbjct: 297 DWVKTLRKSADI 308
>gi|83952309|ref|ZP_00961041.1| PPIC-type PPIASE domain [Roseovarius nubinhibens ISM]
gi|83837315|gb|EAP76612.1| PPIC-type PPIASE domain [Roseovarius nubinhibens ISM]
Length = 441
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 103/270 (38%), Gaps = 6/270 (2%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKING 70
K T V ++ + P+ + A S T+N IT +I +R L+L + G
Sbjct: 14 IAKFFQTSAVALVLGLTPLTAAPVIAQSKFEAVITVNNAPITQFEIEQRARFLRLLRAPG 73
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ +A ++LI + LK Q +SGI + + + A LS + L +G+
Sbjct: 74 DPIALAREQLIEDRLKLQAARQSGIEVNEEQIAAGMDRFASQANLSGAEMVKLLASEGVY 133
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ F+ ++ W D+ + F + E ++ + + E L+ ++
Sbjct: 134 EETFRAFIIAGVSWSDLTRARFAPRVSISEDDLERARAAVGKGGGVEVLMSELIIPYTPQ 193
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NL 249
+ +RI + + ++++ S G+ + ++L + +
Sbjct: 194 TQEQVEATARRISEG----ASESSFAAEARRYSATRTAPSGGRLPWTPLNELPGGLRGII 249
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
L + + T+P Q V + D R+
Sbjct: 250 LGLAPGDVTDPLPLQGAVALFQLRDIRETD 279
>gi|145628832|ref|ZP_01784632.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
gi|144979302|gb|EDJ88988.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
Length = 246
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
++ +++SG+ D +++ A GL+ F LD QGI N F+Q +A Q +
Sbjct: 2 QKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNTFRQQIANQMVMGA 61
Query: 147 VVKNDFMLKYGNLEMEIPANKQKM----------KNITVREYLIRTVLFSIPDNKLQNQG 196
V G E+ A QKM + + +EY +R +L + N L N
Sbjct: 62 VRNKAIQESIGVTREEVVALGQKMLEEAKEKGTAQKVMGKEYEVRHILLKL--NPLLNDA 119
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQF-QNLLKKS 253
+K++ + SK + + G Y PQF Q ++K
Sbjct: 120 QAKKQLAKIRSDIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPETYAPQFAQTVVKSK 179
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYVKKLRS 310
Q + P+ T+ G + + RD G++ +AY + T+++ ++VK LR
Sbjct: 180 QGVISAPFKTEFGWHILEVTGVRD--GDLTAEAYTQKAYERLVNTQLQDATNDWVKALRK 237
Query: 311 NAIIHYY 317
A I Y+
Sbjct: 238 RANIQYF 244
>gi|254487361|ref|ZP_05100566.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
GAI101]
gi|214044230|gb|EEB84868.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter sp.
GAI101]
Length = 411
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 101/263 (38%), Gaps = 10/263 (3%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + P+ + +A +R +N V+T+ ++ +R L+L G A+ LI
Sbjct: 21 LALMTATPLAAQNLFAPVAR----VNESVVTEFEVQQRQRFLQLLNAPGATRDGALTSLI 76
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
E L+ + + ++GI + + A LS +F+S L++ G+ F+ ++
Sbjct: 77 DERLRNEAVAEAGIALTPEGIEDSLTEFAARANLSTAEFTSALERSGVAKETFRDFVVNS 136
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
W ++++ + + + EI + VR L ++ + P + + ++
Sbjct: 137 VGWRELIRARYNARVQITDAEINRALGATRGGGVRVLLSEIIIPAPPKDAARVNALAEQI 196
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
+ + ++++ G+ ++ S L P Q +L + T P
Sbjct: 197 AQSRSAAEFSGF-----ASRYSATASRGRGGRLEWQDLSSLPPSLQPLILGLAPGEVTAP 251
Query: 261 YVTQKGVEYIAICDKRDLGGEIA 283
V + D ++ G
Sbjct: 252 LPIPNAVALFQLRDIQETGAATP 274
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNT 257
+ + A+ R R+ CN L A + + +++ L K
Sbjct: 292 EAALAQAQTLRGRVDT-CNDLYGVAKGQP-AEVLERVTKAPAEIPQDIAIELSKLDPGEV 349
Query: 258 TNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ G + ++ +CD+ + + ++ ++ + + +++LR++A I
Sbjct: 350 STALTRANGQTLMFLMMCDRTSASNQDTSRTDVANALRQERLSGYADQLLEQLRADARI 408
>gi|83942391|ref|ZP_00954852.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36]
gi|83846484|gb|EAP84360.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36]
Length = 405
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 102/278 (36%), Gaps = 10/278 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+ L + P+ + +A +N V+T+ ++ +R L++ G
Sbjct: 6 LTRSIAVLGLGLMTAAPVSAQNLFAP----VAKVNESVVTEFEVQQRQRFLEVLNAPGAT 61
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A+ LI E L+ + + ++GI + + A LS E+F+ L + G+
Sbjct: 62 REGALTSLIDERLRNEAVAEAGIELTPQGIEDSLAEFASRADLSTEEFTQALGQSGVSRE 121
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F+ ++ W ++V+ + + + EI + + VR + ++ + P
Sbjct: 122 TFRDFVVNSVGWRELVRARYASRVQITDAEINRALGETQGSGVRVLVSEIIIPAPPQQAA 181
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ ++ + + N ++++ G+ + +DL P Q +L
Sbjct: 182 RVNALAEQISQSKSTAEF-----SNYASRYSATASRGRGGRLPWQNLTDLPPSLQPLILN 236
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ T+P V + D + + +
Sbjct: 237 LAPGEVTDPLPIPNAVALFQLRDIEETSVAAPTYSEIE 274
>gi|83953611|ref|ZP_00962332.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1]
gi|83841556|gb|EAP80725.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1]
Length = 405
Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 102/278 (36%), Gaps = 10/278 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+ L + P+ + +A +N V+T+ ++ +R L++ G
Sbjct: 6 LTRSIAVLGLGLMTAAPVSAQNLFAP----VAKVNESVVTEFEVQQRQRFLEVLNAPGAT 61
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A+ LI E L+ + + ++GI + + A LS E+F+ L + G+
Sbjct: 62 REGALTSLIDERLRNEAVAEAGIELTPQGIEDSLAEFASRADLSTEEFTQALGQSGVSRE 121
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F+ ++ W ++V+ + + + EI + + VR + ++ + P
Sbjct: 122 TFRDFVVNSVGWRELVRARYASRVQITDAEINRALGETQGSGVRVLVSEIIIPAPPQQAA 181
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ ++ + + N ++++ G+ + +DL P Q +L
Sbjct: 182 RVNALAEQISQSKSTAEF-----SNYASRYSATASRGRGGRLPWQNLTDLPPSLQPLILN 236
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ T+P V + D + + +
Sbjct: 237 LAPGEVTDPLPIPNAVALFQLRDIEETSVTAPTYSEIE 274
>gi|315635080|ref|ZP_07890360.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC
33393]
gi|315476201|gb|EFU66953.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC
33393]
Length = 307
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 116/311 (37%), Gaps = 28/311 (9%)
Query: 23 IIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
++F + +++ + A + + T+NG + + + + + A+ ++I
Sbjct: 6 VLFVALGFLAFIANAQAEEKVVATVNGVPVLESQVKSAL-------TKKSNRQAALDKVI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L Q +++SG++ ++ V+ A GL+ LD QGI ++Q +A Q
Sbjct: 59 DDILVAQAVKESGVSVNNAQVDQIIEGIAAQNGLTFGQLLDALDYQGISYAAYRQQIAQQ 118
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRTVLFSIPDNK 191
+ +V ++ A K + +T +Y +R +L + N
Sbjct: 119 LMMSEVRNRAISQSVDVSREQVEALAKKMLAEAKAKGNVAKLTDTQYEVRHILLKL--NP 176
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL 249
L N + +++ L SK + + G Y F
Sbjct: 177 LLNDAQAKAQLEQIRADILAGKTTFADAALKYSKDYLSGANGGSLGYAFPEMYVGPFNKA 236
Query: 250 LKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYV 305
++ + Q + P+ T+ G + + + R + AY Q +++ ++V
Sbjct: 237 VRTTKQGVISAPFKTEFGWHILEVTNTRQ--ADRTEDAYRQKAYEQIVNQQLQDSARDWV 294
Query: 306 KKLRSNAIIHY 316
+ LR A I Y
Sbjct: 295 QALRKRANIKY 305
>gi|126728790|ref|ZP_01744605.1| PPIC-type PPIASE domain [Sagittula stellata E-37]
gi|126710720|gb|EBA09771.1| PPIC-type PPIASE domain [Sagittula stellata E-37]
Length = 412
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 99/237 (41%), Gaps = 6/237 (2%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+N +VIT ++ +R +L++ + G+L K+A ++LI + L+ Q +GI +
Sbjct: 35 AVIVNEQVITGYELEQRKRMLQVMRAPGDLNKVAREQLIDDRLRLQAARDAGIQPSPEEL 94
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ A L+ E F+ L + G+ + ++ ++ W +V+ F + E E
Sbjct: 95 LDGMEEFASRASLTREQFTQALAQAGVDEETYRDFVRAGLSWRMLVQQRFAGRANVSEDE 154
Query: 163 IPANKQKMKNITVRE-YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ +N T L+ ++ +P + + +RI +++ + +
Sbjct: 155 VDRALSSGQNGTSTVRVLLSEIIMPMPPGQEEVVRERAQRIAQLDDT----GAFSAQARR 210
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
F++ + G+ + S+L P Q + L + ++P Q + + +
Sbjct: 211 FSATASRGAGGQLPWRSLSELPPPLQPIVLGLAPGEVSDPIPLQGAMALFQLRAIEE 267
>gi|251793857|ref|YP_003008589.1| SurA [Aggregatibacter aphrophilus NJ8700]
gi|247535256|gb|ACS98502.1| SurA [Aggregatibacter aphrophilus NJ8700]
Length = 308
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 116/311 (37%), Gaps = 27/311 (8%)
Query: 23 IIFCIVPIVS-YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
+ F V I++ + ++ T+NG + + + + A+ ++I
Sbjct: 6 VFFSAVGILALVANVQAEEKVVATVNGIPVLESQVQ------SALNKKTNNRQAALNKVI 59
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L Q +++SG+ ++ V+ A GL+ LD QGI ++Q +A Q
Sbjct: 60 DDILVDQAVQESGVKVNNAQVDKIIEGIAAQNGLTFGQLLDALDYQGISYRAYRQQIAQQ 119
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRTVLFSIPD-- 189
+ +V + ++ A +K + ++ +Y +R +L +
Sbjct: 120 VMMSEVRNHAISQSVDISREQVEALAKKMLDEAKSKGSVAKVSDTQYEVRHILLKLNPLL 179
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
N Q + +++ D ++ K K + + G Y F
Sbjct: 180 NDAQAKAQLEQIRADIIAGKMTFADAALKYSKDY--LSGANGGSLGYAFPEMYVGPFNQA 237
Query: 250 LKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYV 305
++ + Q + P+ T+ G + + + R G+ AY Q +++ ++V
Sbjct: 238 IRTTKQGVISAPFKTEFGWHILEVTNTRQ--GDRTEDAYRQKAYEQIVNQQLQDSARDWV 295
Query: 306 KKLRSNAIIHY 316
+ LR A I Y
Sbjct: 296 QALRKRADIKY 306
>gi|293391019|ref|ZP_06635353.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951553|gb|EFE01672.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 310
Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 110/318 (34%), Gaps = 27/318 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ ++F + + + + T+NG I + + I +
Sbjct: 1 MKMNLKFVLFAAIGFFVLAAHVHAEEKVVATVNGIPILESQVQSAI------NKKTNDRQ 54
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A+ ++I + L Q +++S + ++ ++ A GL+ LD QGI +
Sbjct: 55 AALNKVIDDILVDQAVKESDVKVNNAQIDQIIEGIAAQNGLTFGQLLDALDYQGISYRAY 114
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRTVL 184
+Q +A Q + +V + ++ A K + I+ +Y +R +L
Sbjct: 115 RQQIAQQVMMSEVRNHAISQSVDVSREQVEALAKKMLDEAKAKGSVAQISDTQYEVRHIL 174
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDL 242
+ N L N + +++ + SK + + G Y
Sbjct: 175 LKL--NPLLNDAQAKAQLEQIRADIIAGKTTFADAALKYSKDYLSGANGGSLGYAFPEMY 232
Query: 243 HPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIE 298
F ++ + + P+ T+ G + + + R + AY Q +++
Sbjct: 233 VGPFNQAVRTTKPGVISAPFRTEFGWHILEVTNTRQ--ADRTEDAYRQKAYEQIVNQQLQ 290
Query: 299 KHEAEYVKKLRSNAIIHY 316
++V+ LR I Y
Sbjct: 291 DSARDWVQALRKRVDIKY 308
>gi|261867180|ref|YP_003255102.1| SurA [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412512|gb|ACX81883.1| SurA [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 310
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 27/318 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ ++F + + + + T+NG I + + I +
Sbjct: 1 MKMNLKSVLFAAIGFFVLAAHVHAEEKVVATVNGIPILESQVQSAI------NKKTNDRQ 54
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A+ ++I + L Q +++S + ++ ++ A GL+ LD QGI +
Sbjct: 55 AALNKVIDDILVDQAVKESDVKVNNAQIDQIIEGIAAQNGLTFGQLLDALDYQGISYRAY 114
Query: 135 KQYLAIQSIWPDV----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+Q +A Q + +V V + + ++ K + I+ +Y +R +L
Sbjct: 115 RQQIAQQVMMSEVRNHAISQSVDVSREQVEVLAKKMLDEAKAKGSVAQISDTQYEVRHIL 174
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDL 242
+ N L N + +++ + SK + + G Y
Sbjct: 175 LKL--NPLLNDAQAKAQLEQIRADIIVGKTTFADAALKYSKDYLSGANGGSLGYAFPEMY 232
Query: 243 HPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIE 298
F ++ + + P+ T+ G + + + R + AY Q +++
Sbjct: 233 VGPFNQAVRTTKPGVISAPFKTEFGWHILEVTNTRQ--ADRTEDAYRQKAYEQIVNQQLQ 290
Query: 299 KHEAEYVKKLRSNAIIHY 316
++V+ LR A I Y
Sbjct: 291 DSALDWVQALRKRADIKY 308
>gi|163743160|ref|ZP_02150542.1| PPIC-type PPIASE domain [Phaeobacter gallaeciensis 2.10]
gi|161383577|gb|EDQ07964.1| PPIC-type PPIASE domain [Phaeobacter gallaeciensis 2.10]
Length = 421
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 105/260 (40%), Gaps = 12/260 (4%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F P + +A + T+N V+T+ ++ +R L L + G+ +K A ++LI+
Sbjct: 32 VMFGPAPAAAQGLFAPA----VTVNDAVVTNYELQQRARFLTLLRDPGDPQKKAREDLIL 87
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ LK + ++GI + + A LS ++F + L + G+ + + +
Sbjct: 88 DRLKLDVLAQAGIEPTEEEIVEGMTELAGRANLSLQEFLNVLGQNGVAPETLRDFTRVGI 147
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
W + V ++ + E EI + V L ++ N Q + Q+
Sbjct: 148 AWREYVAARYLAQARPSEEEIDRAMGLAGSGGVEVLLSELIMPINAQNAAQVEEVAQQ-- 205
Query: 203 KDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
SR+ ++ ++++ S G+ ++ ++L PQ Q +L T P
Sbjct: 206 ----VSRITTTAAFSQAAQQYSATATRQSGGRLPWMPLTNLPPQLQQVVLGLRPGEVTAP 261
Query: 261 YVTQKGVEYIAICDKRDLGG 280
V + D R+ G
Sbjct: 262 LPLDGAVALFQLRDLRETSG 281
>gi|163739707|ref|ZP_02147115.1| leucyl aminopeptidase [Phaeobacter gallaeciensis BS107]
gi|161386937|gb|EDQ11298.1| putative chaperone surA [Phaeobacter gallaeciensis BS107]
Length = 421
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 105/260 (40%), Gaps = 12/260 (4%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F P + +A + T+N V+T+ ++ +R L L + G+ +K A ++LI+
Sbjct: 32 VMFGPAPAAAQGLFAPA----VTVNDAVVTNYELQQRARFLTLLRDPGDPQKKAREDLIL 87
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ LK + ++GI + + A LS ++F + L + G+ + + +
Sbjct: 88 DRLKLDVLAQAGIEPTEEEIVEGMTELAGRANLSLQEFLNVLGQNGVAPETLRDFTRVGI 147
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
W + V ++ + E EI + V L ++ N Q + Q+
Sbjct: 148 AWREYVAARYLAQARPSEEEIDRAMGLAGSGGVEVLLSELIMPINAQNAAQVEEIAQQ-- 205
Query: 203 KDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
SR+ ++ ++++ S G+ ++ ++L PQ Q +L T P
Sbjct: 206 ----VSRITTTGAFSQAAQQYSATATRQSGGRLPWMPLTNLPPQLQQVVLGLRPGEVTAP 261
Query: 261 YVTQKGVEYIAICDKRDLGG 280
V + D R+ G
Sbjct: 262 LPLDGAVALFQLRDLRETSG 281
>gi|86138690|ref|ZP_01057263.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193]
gi|85824750|gb|EAQ44952.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193]
Length = 396
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 100/270 (37%), Gaps = 7/270 (2%)
Query: 22 LIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ + + + A T++ IT ++++R + + + G+ E +A QEL
Sbjct: 1 MTLGFALSTTAVPLAAQGLFSPAVTVDNAAITYYELNQRALFMGVLRTPGDPEVMARQEL 60
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + LK E+ K GI+ + + A LS +F + L + GI + + +
Sbjct: 61 IKDRLKLAELAKVGISPSEEEITAGMTELASRANLSLNEFLTVLKQNGIDPETVRDFTKV 120
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
W + + F+ + E EI + + V+ L ++ N Q + +
Sbjct: 121 GIGWREYIGARFLSRARPTEAEIDRAMGQAGSGGVQVLLSELIVPINEQNAQQVEALTDQ 180
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN 259
+ + ++++ + G+ ++ + L PQ Q +L T
Sbjct: 181 VGQL-----TSFAAFSSAATQYSASDSRNNGGRLPWMNLTKLPPQLQPVVLALDPGEITE 235
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
P Q V + R++ G + +
Sbjct: 236 PLPLQGAVAMFQMRGVREVTGSRQRYSAIE 265
>gi|254362982|ref|ZP_04979046.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
gi|153094638|gb|EDN75442.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
Length = 314
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 61/320 (19%), Positives = 118/320 (36%), Gaps = 25/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ + F + + + ++ + A R+ +N I + + +L +K
Sbjct: 1 MKLVKSLFAVAVATMS--LTQTAHAFEERVVALVNDTPIMQSQVQR---VLGKKKATETA 55
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ A+ ++I + L +Q ++++G+ VN A G++ LD QGI
Sbjct: 56 QRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITYGQLLDALDYQGITLE 115
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRT 182
FK+ +A Q V ++ A K+K ++ +E+ I
Sbjct: 116 QFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDKAAGKLKTVSGKEHRISH 175
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLES 240
+L N + N + ++ + K S G +
Sbjct: 176 ILLKT--NPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSVDYASGADGGDLGFNFLE 233
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F N+ K N + P+ +Q G + + D R+ G+ AY Q +
Sbjct: 234 IYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRN--GDRTEDAYHQRAYQQLVNKQ 291
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
E+ ++VK LR A I Y
Sbjct: 292 AEEASKDWVKALRKTANIQY 311
>gi|261493819|ref|ZP_05990333.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495044|ref|ZP_05991511.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309286|gb|EEY10522.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261310522|gb|EEY11711.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 314
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 61/320 (19%), Positives = 118/320 (36%), Gaps = 25/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ + F + + + ++ + A R+ +N I + + +L +K
Sbjct: 1 MKLVKSLFAVAVATMS--LTQTAHAFEERVVALVNDTPIMQSQVQR---VLGKKKATETA 55
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ A+ ++I + L +Q ++++G+ VN A G++ LD QGI
Sbjct: 56 QRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITYGQLLDALDYQGITLE 115
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA----------NKQKMKNITVREYLIRT 182
FK+ +A Q V ++ A K+K ++ +E+ I
Sbjct: 116 QFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDKAAGKLKTVSGKEHRISH 175
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLES 240
+L N + N + ++ + K S G +
Sbjct: 176 ILLKT--NPILNDAQAKAKLSSLTADINSGKISFEEAAKAHSVDYASGTDGGDLGFNFLE 233
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F N+ K N + P+ +Q G + + D R+ G+ AY Q +
Sbjct: 234 IYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRN--GDRTEDAYHQRAYQQLVNKQ 291
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
E+ ++VK LR A I Y
Sbjct: 292 AEEASKDWVKALRKTANIQY 311
>gi|56697307|ref|YP_167673.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Ruegeria pomeroyi DSS-3]
gi|56679044|gb|AAV95710.1| PPIC-type PPIASE domain [Ruegeria pomeroyi DSS-3]
Length = 412
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 56/309 (18%), Positives = 112/309 (36%), Gaps = 11/309 (3%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
T+LS + + L + V+ +S +N VIT ++ +RI L+++
Sbjct: 5 LTTLSRCLARMMGAAALTLTLAGGPVAAQSLF---SPAIRVNQGVITHFELEQRIRLMEV 61
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+I G+ +K A + LI E LK Q +E++GI V A LS ++F + L
Sbjct: 62 LRIPGDPQKDARRSLIEEALKMQAVEEAGIEVAPEDVQLGIDDFAARARLSTDEFLAALA 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+G+ + +++ Q W D V F+ + EI ++ L ++
Sbjct: 122 NEGVSAETVRDFVSKQMAWRDYVSARFLARARPTPDEIDRALGLGGGGGLQVLLSEIIIP 181
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
P Q Q+ + + + ++ + G+ ++ + L P
Sbjct: 182 ITPQTVDQVDEVAQQI-----AALTSYEAFSSAAIQVSAAETRENGGRMPWIPLAQLPPA 236
Query: 246 FQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL--SAQNTPTKIEKHEA 302
Q +L+ ++P V + R+ A + +A
Sbjct: 237 LQPVILELEPGEISDPITLPNAVALFQMRGLREAAVGTPRYAAIDYAAYRMAGGRSPETL 296
Query: 303 EYVKKLRSN 311
+ +LR
Sbjct: 297 KAATELRQR 305
>gi|254464586|ref|ZP_05077997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales
bacterium Y4I]
gi|206685494|gb|EDZ45976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales
bacterium Y4I]
Length = 305
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 97/258 (37%), Gaps = 10/258 (3%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87
+P + +A + T+N +VIT ++ +R ++ G+ + A +ELI + LK
Sbjct: 31 LPAGAQNLFAPA----ITVNDQVITRYELEQRARFQAALRVPGDPLETAREELINDRLKL 86
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
++++GI + + A LS +F + L +QG+ + + + W +
Sbjct: 87 MVLKQAGIELSEEDITAGMEELAGRANLSLNEFLTVLQQQGVAPQTLRDFTKVGLGWREY 146
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ F+ + EI +V+ L ++ N Q + V++ K
Sbjct: 147 TRARFLSRARPTPEEIDRAMGTSGTGSVQVLLSEFIVPLNDQNAAQVEELVEQVAKLKG- 205
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKG 266
++++ G+ ++ + L PQ Q +L + P Q
Sbjct: 206 ----YDSFSAAATQYSAAGSRGDGGRLPWMPLTKLPPQLQEVVLALQPGEISEPLPLQGA 261
Query: 267 VEYIAICDKRDLGGEIAL 284
V + R++ G
Sbjct: 262 VALFQMRGLREVEGAAPR 279
>gi|114766150|ref|ZP_01445154.1| PPIC-type PPIASE domain [Pelagibaca bermudensis HTCC2601]
gi|114541610|gb|EAU44652.1| PPIC-type PPIASE domain [Roseovarius sp. HTCC2601]
Length = 408
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 105/268 (39%), Gaps = 6/268 (2%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGEL 72
L L + + + A + T++ VIT +I +R ++ L G +
Sbjct: 4 ARLLRALTLTAGLALTVTPGTAPAQNLFAPAITVDEMVITGYEIEQRRRMMTLLNAPGNV 63
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+++ ++LI + L+ + +GI + + A LS E F + L++ G+ +
Sbjct: 64 NELSREQLIDDRLRLKAARAAGIEPSEQDILDGMDEFAGRADLSREQFVAVLNQGGVDEE 123
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F+ ++ + W D+V+ F + E+ + L+ ++ I
Sbjct: 124 TFRDFVRAGTAWRDLVRAQFASRTQVTPEEVDRALASGGGSSDVRVLLSEIIMPI---NA 180
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
QN VQ R + + + ++++ + G+ + ++L PQ ++ +L
Sbjct: 181 QNAESVQARAERISQMTST-ADFSAQARQYSATATRDNGGRLPWRDLTELPPQIRSLVLG 239
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ T+P Q V + D + G
Sbjct: 240 LAPGEVTDPLPIQGAVALFQLRDIEETG 267
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNP 260
+ A R+ + C+ L A + + L +++ L K +
Sbjct: 292 LAQARVLAERIDR-CDDLYAVAKGQPEEVL-DRGALPPAEIPTDIAYELSKLDPGEVSTA 349
Query: 261 YVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+G + ++ +C + E A ++ + ++ + Y+ +LR+NA I
Sbjct: 350 LTRAEGQTLVFLMLCGRTAAVAEDADRSQVEIGLRNRRLSEVSDSYLAQLRANARI 405
>gi|240949661|ref|ZP_04753996.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor
NM305]
gi|240295919|gb|EER46595.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor
NM305]
Length = 317
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 66/320 (20%), Positives = 117/320 (36%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +L+ F +S +A R+ T++G +I + +++ L +
Sbjct: 1 MKFTSAKSLLVAFVATLGLSQSLFAAEERVVATVDGNMIMESQVAR---ALGKKANTEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++ +I E L ++ I++SG+ D V+ + A GL+ LD QGI N
Sbjct: 58 RKAALESIIDEMLVQKAIQQSGVKVDYRRVDQAIEEIAARNGLTYGQLLDALDYQGISLN 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----------KMKNITVREYLIRT 182
++Q +A Q + V E+ A Q K+K ++ E I
Sbjct: 118 QYRQQIAQQMMMEAVRHQSIGKSIQVNPEEVRAQAQALMAKDKAAGKLKAVSGTEPRISH 177
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY-LLE 239
+L + N + ++ + K S + G + L+
Sbjct: 178 ILIKT--TPVLNDAQAKAKLNSIIADIKAGKTTFEEAAKANSVDYVSAADGGDLGFNFLD 235
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
K Q T P+ +Q G + + D R G+ AY Q +
Sbjct: 236 IYDPAFANAAAKAKQGQITAPFKSQFGWHILKVTDSRQ--GDRTEDAYAQRAYEQLANQQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
E ++VK LR A I Y
Sbjct: 294 AEAASKDWVKALRKTANIQY 313
>gi|254476481|ref|ZP_05089867.1| ppic-type ppiase domain protein [Ruegeria sp. R11]
gi|214030724|gb|EEB71559.1| ppic-type ppiase domain protein [Ruegeria sp. R11]
Length = 421
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 97/255 (38%), Gaps = 8/255 (3%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ S T+N V+T+ ++ +R L L + G+ + A ++LI + LK + +
Sbjct: 37 AVGSAQGLFSPAVTVNDSVVTNYELQQRARFLALLREPGDPLEKAREDLIEDRLKLEVLA 96
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
++GI V + A LS ++F + L + G+ + + + W V +
Sbjct: 97 QAGIDPTDEEVTAGMTELAGRANLSLQEFLNVLRENGVDPQTLRDFSRVGIAWRGYVGSR 156
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
++ + E EI + V L ++ N Q + Q+ +++
Sbjct: 157 YIGQARPSEEEIDRAMGLSGSGGVEVLLSELIMPINAQNAPQVEEVAQQ------VAQMN 210
Query: 212 LPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
++ S + G+ ++ ++L PQ Q +L+ S T P V
Sbjct: 211 TTAAFSQAATQFSAARTRENGGRLPWMPLTNLPPQLQQVVLELSPGEVTAPIPLDNAVAL 270
Query: 270 IAICDKRDLGGEIAL 284
+ D R+ G
Sbjct: 271 FQMRDLRESAGSAPR 285
>gi|149201836|ref|ZP_01878810.1| PPIC-type PPIASE domain [Roseovarius sp. TM1035]
gi|149144884|gb|EDM32913.1| PPIC-type PPIASE domain [Roseovarius sp. TM1035]
Length = 414
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 102/275 (37%), Gaps = 7/275 (2%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKL 65
++ + L L + ++ A + + + +N + IT ++ +R LL L
Sbjct: 1 MTPIFRRLIAALTLAVTGLLVWPLSGGMAQAQNLFSPQIYVNDQAITGYELQQRARLLTL 60
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ G+ +++A ++LI E +K SG+ + + V + A ++A+ + L
Sbjct: 61 FRAPGDPQRLAREQLIEERIKIDAARASGLVLEEDLVRDGMEEFAGRANMTADQLIAALG 120
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+ F++++ W ++ + F + E ++ + + L+ ++
Sbjct: 121 DSGVSQESFREFVRAGITWRELTRARFAARVSVSEDDLERATRALTGGAAVRVLLSEIIL 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ ++ + + + ++ G+ ++ S+L
Sbjct: 181 PV---TSLEDAEAKQALAASIAESTSEGAFAEAARRHSAAPSSSRGGRMDWVALSELPAG 237
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ + L + ++P + + + D ++
Sbjct: 238 LRPIVLGLAPGEVSDPLPLEGALALFYMRDIEEMT 272
>gi|85706339|ref|ZP_01037433.1| PPIC-type PPIASE domain protein [Roseovarius sp. 217]
gi|85669112|gb|EAQ23979.1| PPIC-type PPIASE domain protein [Roseovarius sp. 217]
Length = 420
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 101/278 (36%), Gaps = 7/278 (2%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIAL 62
T ++ ++ L + + S + + +N + IT ++ +R +
Sbjct: 4 LTRMTPILRRTLAALTLAAIGLTGLPGGVSPVQAQNLFAPAIHVNDQAITGYELQQRARM 63
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
L L + G+ ++A ++LI E +K G+ + + V + A ++A+ S
Sbjct: 64 LTLFRAPGDPRRLAREQLIEERIKLDAARAVGLVVEDDMVRTGMEEFAGRANMTADQLIS 123
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
L++ G+ F++++ W ++ + F + E ++ + + L+
Sbjct: 124 SLEEAGVSQQSFREFVRAGITWRELTRAQFASRVSVSEDDLERATRALTGGAAVRVLLSE 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
++ + ++ + ++++ G+ +++ SDL
Sbjct: 184 IILPV---TSLGDAEAKQALATQIAEADSEGDFAAAARQYSAAPSAGRGGRMEWVALSDL 240
Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ + L + ++P G+ + D +
Sbjct: 241 PAGLRPIVLGLAPGEVSDPLPIDGGLALFYMRDIEETS 278
Score = 36.9 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 46/149 (30%), Gaps = 11/149 (7%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
++ EY + ++ +R + C+ L A
Sbjct: 276 ETSVAAPEY--SAIEYAAYYISGGRSAEALQRAAQVRAA----VDTCDDLYGVAKGQPPE 329
Query: 230 SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKG--VEYIAICDKRD-LGGEIALK 285
+ + ++ L + T+ G + ++ +C + L GE
Sbjct: 330 VL-ERGSKAPEEIPQDIAAALSQLDPGETSASVTRSNGQTLVFLMLCGRSPKLDGEAPSV 388
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
LS +IE Y+++LR+ A I
Sbjct: 389 EDLSNFIRNQRIESFANGYLEQLRAEARI 417
>gi|332558337|ref|ZP_08412659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides WS8N]
gi|332276049|gb|EGJ21364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides WS8N]
Length = 405
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 102/273 (37%), Gaps = 9/273 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+K ++ + ++ + A++ + R +N VIT+ + +R+ L +
Sbjct: 1 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 60
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+
Sbjct: 61 GDVEKQAMDALIEDKIRFDAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 120
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F+ ++ IW ++++ F E I + + L+ ++ P
Sbjct: 121 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 180
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
+ + I+ +R + + S G+ ++ +L P
Sbjct: 181 GQEAEAQALAAEIRRN----VRGEGAFAEAARTYSASSSAERGGRIDWVPLQNLPPTLGP 236
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
LL S ++P V + + +
Sbjct: 237 MLLTLSPGQVSDPVKIPNAVALFQLRGRDESSA 269
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIA 271
DC+ L + + + L + + L ++ + +
Sbjct: 301 ADDCDDLYTVMQGAPEQQLRRT-TLPLAQVPQDVALELAGLDAGEVSSSALPGGTRRVLM 359
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+C +R + E + L+ I Y+ LR+NAII
Sbjct: 360 LCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 402
>gi|126736394|ref|ZP_01752136.1| PPIC-type PPIASE domain [Roseobacter sp. CCS2]
gi|126714215|gb|EBA11084.1| PPIC-type PPIASE domain [Roseobacter sp. CCS2]
Length = 383
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T+N VIT ++S+RI LL++ + G+L + A LI + LK+QE+ + G++ + +
Sbjct: 9 VITVNDRVITQYELSQRIRLLEVFRTPGDLNEAARNALIEDRLKQQELARFGVSVPEDAL 68
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ A +S F+ L + GI + + ++ + +W D +++ F + + +
Sbjct: 69 QQAMEEFAGRANMSLPQFTRVLAQDGIDISTLRDFVEVGILWRDFIRSRFNRQITITDAD 128
Query: 163 IP-ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ A Q+ + E L+ ++ + P + +I SR+R + +
Sbjct: 129 VERAIVQQGNTTSQLEVLLNEIIIAPPPGREAAAAQAADQI-----SRMRSFAEFEAAAR 183
Query: 222 FASKIHD-VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
S + + G+ + S+ PQ ++ +L + T+P + + R+
Sbjct: 184 QVSALPSRENGGRLDWTPVSNFPPQIRSIILDLDRGEVTDPIEIPNAIALFQLRGTREA 242
>gi|126462315|ref|YP_001043429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|126103979|gb|ABN76657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
Length = 435
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 103/273 (37%), Gaps = 9/273 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+K ++ + ++ + A++ + R +N VIT+ + +R+ L +
Sbjct: 31 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 90
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+
Sbjct: 91 GDVEKQAMDALIEDKIRFDAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 150
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F+ ++ IW ++++ F E I + + L+ ++ P
Sbjct: 151 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 210
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
+ + I++ +R + + S G+ ++ +L P
Sbjct: 211 GQEAEAQALAAEIRNN----VRGEGAFAEAARTYSASSSAERGGRIDWVPLQNLPPTLGP 266
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
LL S ++P V + + +
Sbjct: 267 MLLTLSPGQVSDPVKIPNAVALFQLRGRDESSA 299
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIA 271
DC+ L + + + L + + L ++ + +
Sbjct: 331 ADDCDDLYTVMKGATEQQLRRT-TLPLAQVPQDVALELAGLDAGEVSSSALPGGTRRVLM 389
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+C +R + E + L+ I Y+ LR+NAII
Sbjct: 390 LCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 432
>gi|257465500|ref|ZP_05629871.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor 202]
gi|257451160|gb|EEV25203.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus minor 202]
Length = 317
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 65/320 (20%), Positives = 115/320 (35%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +L+ F +S A R+ T++G +I + + L +
Sbjct: 1 MKFTSAKSLLVAFVATLGLSQSLLAAEERVIATVDGNMIMESQV---TRALGKKANTEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++ +I E L ++ I++SG+ D V+ + A GL+ LD QGI N
Sbjct: 58 RKAALENIIDEMLVQKAIQQSGVKVDYRRVDQAIEEIAVRNGLTYGQLLDALDYQGITLN 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----------KMKNITVREYLIRT 182
++Q +A Q + V ++ A Q K+K+++ E I
Sbjct: 118 QYRQQIAQQMMMEAVRHQSIGKSIQVNPEDVRAQAQALMAKDKAAGKLKSVSGTEPRISH 177
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY-LLE 239
+L + N + ++ + K S + G + L+
Sbjct: 178 ILIKT--TPVLNDAQAKAKLNSIIADIKAGKTTFEEAAKANSVDYVSAADGGDLGFNFLD 235
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
K Q T P+ +Q G + + D R G+ AY Q +
Sbjct: 236 IYDPAFANAAAKAKQGQITAPFKSQFGWHILKVTDYRQ--GDRTEDAYAQKAYEQLANQQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
E ++VK LR A I Y
Sbjct: 294 AEAASKDWVKALRKTANIQY 313
>gi|126739402|ref|ZP_01755095.1| PPIC-type PPIASE domain [Roseobacter sp. SK209-2-6]
gi|126719502|gb|EBA16211.1| PPIC-type PPIASE domain [Roseobacter sp. SK209-2-6]
Length = 426
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 106/273 (38%), Gaps = 9/273 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKINGEL 72
++ + F + + + + + T++ VIT+ ++ +R + L + G++
Sbjct: 23 VSARLLGAAFALTFGLGFAPSLEAQSLFAPAITVDSAVITNYELDQRERFMALLRTPGDI 82
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A +ELI + LK +++ GI D + + A LS E+F L + GI
Sbjct: 83 AEKAREELIDDRLKLAILDEFGIEVDDEEIKQGMTELAGRANLSLEEFLGVLRQNGIAPE 142
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ + W + + ++ + E EI + + V+ L ++ N
Sbjct: 143 TVRDLTRVGISWRNFLGARYLSQARPTEEEIDRAMGQAGSGGVQVLLSELIVPINEQNAS 202
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
Q + F+Q+ K + ++++ + G+ ++ + L PQ Q +L+
Sbjct: 203 QVEQFIQQVGKLK-----SYDAFSSAATQYSAADSRNNGGRLPWMNLTKLPPQLQAVVLE 257
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
T P Q V + R++ G
Sbjct: 258 LDLGEITEPVPLQGAVALFQMRGLREIVGGTQR 290
>gi|221639318|ref|YP_002525580.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
gi|221160099|gb|ACM01079.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
Length = 405
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 102/273 (37%), Gaps = 9/273 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+K ++ + ++ + A++ + R +N VIT+ + +R+ L +
Sbjct: 1 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 60
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+
Sbjct: 61 GDVEKQAMDALIEDKIRFYAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 120
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F+ ++ IW ++++ F E I + + L+ ++ P
Sbjct: 121 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 180
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
+ + I+ +R + + S G+ ++ +L P
Sbjct: 181 GQEAEAQALAAEIRRN----VRGEGAFAEAARTYSASSSAERGGRIDWVPLQNLPPTLGP 236
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
LL S ++P V + + +
Sbjct: 237 MLLTLSPGQVSDPVKIPNAVALFQLRGRDESSA 269
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIA 271
DC+ L + + + L + + L ++ + +
Sbjct: 301 ADDCDDLYTVMKGATEQQLRRT-TLPLAQVPQDVALELAGLDAGEVSSSALPGGTRRVLM 359
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+C +R + E + L+ I Y+ LR+NAII
Sbjct: 360 LCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 402
>gi|99080787|ref|YP_612941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040]
gi|99037067|gb|ABF63679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040]
Length = 424
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 7/248 (2%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKI-NGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
T+N +VIT ++ +R L + G+ + A +LI + LK+Q ++ G+T
Sbjct: 48 AITVNEDVITTYELEQRALFLSVLGSVQGDPFETARDDLIEDRLKRQVMKDVGLTLSEEE 107
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V + A+ L+ E+F + L++ G+ + + W + V+ F+ + E
Sbjct: 108 VTEGMRELAQRANLTLEEFLASLNQAGVAPETVRDFTTAGLGWREYVRGRFLSQARPSEA 167
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
EI + +V+ L +L +N Q Q + + R +
Sbjct: 168 EIDRAMGTAGSGSVQVLLSEIILPLTQENAAQVQDLAIQISEL-----TRAEAFAASAAQ 222
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
F++ G+ ++ S L PQ Q +L T P Q + + R++ G
Sbjct: 223 FSAADSRTDGGRLPWMSLSRLPPQLQEVVLGLEPGEITQPLPMQGAIAIFRMRGLREVDG 282
Query: 281 EIALKAYL 288
A A +
Sbjct: 283 RSATYAAI 290
>gi|77463460|ref|YP_352964.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|77387878|gb|ABA79063.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 435
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 102/273 (37%), Gaps = 9/273 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+K ++ + ++ + A++ + R +N VIT+ + +R+ L +
Sbjct: 31 MKTFVSHCLALVVAAGLTFTSAPGALAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 90
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G++EK A+ LI + ++ E++G+ + + A LSAE F++ L K G+
Sbjct: 91 GDVEKQAMDALIEDKIRFDAAEQAGLKATEEQIKEGMEEFAGRANLSAEQFAAELGKAGV 150
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F+ ++ IW ++++ F E I + + L+ ++ P
Sbjct: 151 AVETFRDFVHAGLIWRELMRAKFGAVARPTETAIDRAITRQTSRASIRLLLSEIIIPAPP 210
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
+ + I+ +R + + S G+ ++ +L P
Sbjct: 211 GQEAEAQALAAEIRRN----VRGEGAFAEAARTYSASSSAERGGRIDWVPLQNLPPTLGP 266
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
LL S ++P V + + +
Sbjct: 267 MLLTLSPGQVSDPVKIPNAVALFQLRGRDESSA 299
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 8/106 (7%)
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTN---PYVTQKGVE 268
DC+ L + + + L + + L ++ P T++
Sbjct: 331 ADDCDDLYTVMKGATEQQLRRT-TLPLAQVPQDVALELAGLDAGEVSSSALPGDTRR--- 386
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +C +R + E + L+ I Y+ LR+NAII
Sbjct: 387 VLMLCARRPVSAEPIDRGRLAQALANQSISASADAYMADLRANAII 432
>gi|254453743|ref|ZP_05067180.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Octadecabacter
antarcticus 238]
gi|198268149|gb|EDY92419.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Octadecabacter
antarcticus 238]
Length = 388
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 100/282 (35%), Gaps = 6/282 (2%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
++S A T+N V+++ +I +R+ +L + G LE A ++LI + LK
Sbjct: 1 MLSPVMTAAQLAPAITVNDSVVSEFEIDQRVIMLGTFRTPGNLEDTAREQLIEDRLKLAA 60
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +G+ + + A + + F + L + G+ + F+ ++ + W D ++
Sbjct: 61 LNSAGLRITDEGLVGAMGEFATRANMDLDQFITMLGQSGVSEETFRDFVRVNVSWRDFIR 120
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
F + E +I + + E L+ ++ P + RI +
Sbjct: 121 TRFNDRAQVSEADIDLALGQSDASSSIEVLLSEIIIPAPPESAEQANATADRIAQLTSTA 180
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
+ + ++ G+ +L S+ + LL + T P GV
Sbjct: 181 A----FEAEARRVSALPSKTRGGRLDWLPISNYPAGLRGLLLNLAPGEITAPLPITNGVA 236
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ D R++ A + + + R
Sbjct: 237 LFQMRDVREVPRAAPEPAAIEYAAFYIAG-GLSERGLAEARR 277
>gi|260576764|ref|ZP_05844749.1| SurA domain protein [Rhodobacter sp. SW2]
gi|259021016|gb|EEW24327.1| SurA domain protein [Rhodobacter sp. SW2]
Length = 402
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 107/273 (39%), Gaps = 8/273 (2%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++ V+ +F + + + A R +N VI+ ++ +RI+ + + + +
Sbjct: 1 MMRIKTVIFVFLLGLTGAIPAAAQDGPFAPRVYVNDRVISQYELDQRISFMTVLGLRENV 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E++A+ LI E L+ ++ + V + A LS E+F + L G+
Sbjct: 61 EEVALNALIDERLQMTVAKQYNVKLTPKQVEAGMAEFAGRAQLSTEEFLTALAPAGVEAQ 120
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F+ ++ IW ++V+ F + E EI ++ T + L ++ P+ +L
Sbjct: 121 GFRDFVTAGLIWREIVRAKFGPRASISEAEIDQAIAQIDKNTSVQILASEIVIPAPEGQL 180
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKF-ASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
+R+K ++ R P+D K + +S G+ + +L P + L
Sbjct: 181 PVALATARRLK----AQSRTPEDFAKAARENSSSSSAGRGGRLNWTPVGNLPPDVVPVLL 236
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ P + V + + + +
Sbjct: 237 ALKPGQVSAPVKLEGSVALFLLHEIKAQEQDGP 269
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 17/155 (10%)
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLE 220
EI A +Q +Y F +P+ DAE +R+R D CN L
Sbjct: 260 EIKAQEQDGPVTMSVDYA----QFLLPNTTA----------ADAEFARIRNEVDVCNDLN 305
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
K A + + + + + + L K ++ V ++ +C++ +
Sbjct: 306 KVALGLPAEQLLR-ETKPMAQVPSDIGLELAKLDPGESSTALVRGGNRVFLMLCNRIPVL 364
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + AQ ++ + A Y+ LR+NAII
Sbjct: 365 DVPPSREAVRAQLLNQRLAAYGAGYLADLRANAII 399
>gi|319943017|ref|ZP_08017300.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC
51599]
gi|319743559|gb|EFV95963.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC
51599]
Length = 491
Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVETLKKQEI 90
RI +N VIT+ ++ +I L++ + EL K ++++I++ ++Q
Sbjct: 85 DRIVAVVNQGVITESELQAQIHLIEGRAAQTPGAGVPPPDELRKQVLEQMILQLAQEQYA 144
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
G+ V+ A+N GLS + + L +G+ + F++ L + + + +
Sbjct: 145 ADYGLKPSDAEVDRAVADVAQNNGLSTQQLTERLKDEGVSLDTFRRQLVAEIVSARLRER 204
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ E EI A K ++ EY IR +L +P+ Q + QK D ++
Sbjct: 205 ETASNVSISEGEIDAELAKSGKVSQPEYDIRQILLKLPEGADQKEVARQKARADELVAKA 264
Query: 211 RLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268
R D L + S+ D + G + DL F + ++K + P + G
Sbjct: 265 RKGADFGALAQENSEAGDAATGGSMGWRKADDLPGLFADTVRKLKPGEISAPVRSPAGFH 324
Query: 269 YIAICDKRDLGGEIA 283
+ + D+RD G
Sbjct: 325 ILKLQDRRDGGATTV 339
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 5/155 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+++ TV R +L P N + ++R+ D KL K S
Sbjct: 329 QDRRDGGATTVELTHARHILL--PANSPETAAEAERRLSLFRRDIEAGKADFAKLAKEFS 386
Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR-DLGGE 281
G +L D P+F+ +K + P TQ GV + + +R D
Sbjct: 387 SDGSAAKGGDLGWLYPGDTVPEFEQAMKSLHDGEISEPVQTQFGVHLVQVLGRRTDTESP 446
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
L+ A+ K + +++++LR + Y
Sbjct: 447 ERLRNAARAKLREAKGGEAYQQWLRELRDRTYVEY 481
>gi|110680309|ref|YP_683316.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
denitrificans OCh 114]
gi|109456425|gb|ABG32630.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
denitrificans OCh 114]
Length = 406
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 97/282 (34%), Gaps = 27/282 (9%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
IK + L C + S I+ +N VIT+ +I +R L L G
Sbjct: 4 IKQFCSVLALCAACSLAPPLGAQNLFSPAIQ--VNDAVITEFEIEQRQQFLTLLNAPGSS 61
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ V+ELI E L+ Q + +G+ + + A L ++F + L++ GI
Sbjct: 62 RQAVVEELINERLRAQAVANAGLELSDAALQEGMTEFAGRVNLGVDEFKTVLEENGIAAE 121
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F+ ++ + W D + F + E EI + + L+ ++ P ++
Sbjct: 122 TFEDFVRVGVSWRDFIAARFGPRLQVSEEEIDQALGSTNGASNIQVLVSEIIIPAPPSRA 181
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--- 249
V ++I + + ++A + + L +Q L
Sbjct: 182 VEVQEVAEQIA--------VTTSTEEFSEYARRFSATATRDQGGRL------DWQPLSNL 227
Query: 250 --------LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L + T P + V + D R+ G
Sbjct: 228 PPSLRPLLLGLAPGEVTEPLNIPEAVALFQLRDIRETGASTP 269
>gi|322514871|ref|ZP_08067889.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC
25976]
gi|322119175|gb|EFX91320.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC
25976]
Length = 314
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/320 (18%), Positives = 118/320 (36%), Gaps = 24/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A R+ T++G + + D+ + L +
Sbjct: 1 MKLISAKSLLLTLVAAVGISQSAMAWEERVVATVDGVPVMESDVQR----LLGKNATAAQ 56
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K AV++ I + L ++ ++++G+ + V+ Q A G++ LD QGI N
Sbjct: 57 HKSAVEQAIDDVLIQKAVKEAGVKVNYAHVDQAIEQIAARNGITYGQLLDALDYQGITLN 116
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----------KMKNITVREYLIRT 182
++Q +A Q V ++ A Q K+K +T +Y I
Sbjct: 117 QYRQQIAQQMAMEQVRNISIGKSIQVQPQDVQARAQELLAQDKAIGKLKTVTGNQYRISH 176
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L N +Q + + + D + + + G Y
Sbjct: 177 ILLKTTPVLNDVQAKAKLTQITADINAGKTTFEQ--AAKLNSVDYVSAADGGDLGYNFLD 234
Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F Q+ T P+ +Q G + + + G+ AY Q +
Sbjct: 235 IYDPAFAKAASMAKQDQITAPFKSQFGWHILKVTGSQQ--GDRTEDAYHQRAYEQLVDKQ 292
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LR A + Y
Sbjct: 293 AQEASRDWVKALRKTANVQY 312
>gi|260433485|ref|ZP_05787456.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417313|gb|EEX10572.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 417
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 52/286 (18%), Positives = 105/286 (36%), Gaps = 12/286 (4%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
P + ++ + R +N +++T ++ +R L+L I G E + LI E L+KQ
Sbjct: 34 PASAQSPFSPAIR----VNQDIVTWYELEQRQRFLELLGIPGSSEAEVRKALIDERLRKQ 89
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ ++GI V + A LS E+F + L G+ + Y+A Q W D V
Sbjct: 90 AMREAGIQSAPEDVQLAIDEFAARGQLSPEEFLAALSDAGVAPETVRDYVASQLAWRDYV 149
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
F+ + + EI + ++ L ++ P Q + ++ +
Sbjct: 150 SARFISQARPTQDEINRALGQAGGGGLQVLLSEIIIPVTPQTLGQAEALAEEIAQVK--- 206
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267
+ ++++ + G+ +L ++L P Q +L T+P V
Sbjct: 207 --SVDAFSAAATQYSAAPTRENGGRLDWLNITNLPPVLQPIILGLKTGEVTDPLTLPNAV 264
Query: 268 EYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ R++ K +A P + L+
Sbjct: 265 ALFQLRGLREVATGTPRYSKIDYAAYYLPGGLSPETQRRAADLKEK 310
>gi|159043736|ref|YP_001532530.1| SurA domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157911496|gb|ABV92929.1| SurA domain protein [Dinoroseobacter shibae DFL 12]
Length = 398
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 102/265 (38%), Gaps = 5/265 (1%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
L+ ++ S A + T+N E I+ ++ +R + ++ G+ ++A + L
Sbjct: 7 ALLALAMLIGQPATSQAQTFGPVITVNNEGISGYELEQREKFVTALRLPGDPARLAREGL 66
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + LK Q +G+ + + + A L+ E F + L +G+ F+ ++
Sbjct: 67 IEDKLKLQAARAAGLEIGIDELELGLEEFASRANLTTEQFIAALADEGVAPETFRDFVRA 126
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+W ++++ F + + E+ + + ++ P ++ +
Sbjct: 127 DLVWRELIRQRFGPRARVSDAEVERALALQGAASGARIRVAEIIIPTPPDRRVEAETLAA 186
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
I++ ++ + ++F++ + G ++ S+L P Q LL + ++
Sbjct: 187 NIRERVQTTAQFS---EAAQRFSAASSRANGGLRDWIAVSELPPGLAQRLLTLGPGDVSD 243
Query: 260 PYVT-QKGVEYIAICDKRDLGGEIA 283
P + + + ++
Sbjct: 244 PVPLGDQAIALFQVRGFQESAARAP 268
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
C+ L A + + S+ + + L +++ L N + G E+I +C
Sbjct: 301 CDDLYGLARDLPEGSLRR-EVLAAAEIPSDIATALAGLDNQESTEIARAGGREHIMLC-T 358
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R E + L Q ++ + A Y+++L + A I
Sbjct: 359 RTTALEEDDEGTLRRQLLNQRLGSYAANYLQELLAEATIQ 398
>gi|84516316|ref|ZP_01003676.1| PPIC-type PPIASE domain [Loktanella vestfoldensis SKA53]
gi|84510012|gb|EAQ06469.1| PPIC-type PPIASE domain [Loktanella vestfoldensis SKA53]
Length = 415
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 112/275 (40%), Gaps = 12/275 (4%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T L + P + +A + T+N VIT ++++RI LL++ G++ + A
Sbjct: 18 TAVLALALGLGQPATAQNQFAPA----ITVNERVITQYELTQRIRLLEVFGTRGDIAQAA 73
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
LI + LK+QEI++ G+ +N + A + F++ L + G+ +
Sbjct: 74 RDALIADRLKQQEIDRVGLQVPPEAINAALDEFAGRADMDLAQFNAMLAQNGVDAVTLRD 133
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+++I W + V+ F + + +I A Q + + E L+ ++ + P
Sbjct: 134 FVSIGVTWREYVRARFNREVTVTDADIARAQGQIGRATSEMEVLLNEIIIAAPPEMADRA 193
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKS 253
+ +++R D + S + G+ +L ++ PQ Q+ +L
Sbjct: 194 AQAA-----DQIAQMRSFADFEAAARQVSALPSRDQGGQLDWLPIANYPPQLQSLILDLD 248
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
T P + G+ + KR+ A A +
Sbjct: 249 TGEVTEPIMIPNGIALFQMRGKREALRPAAAPASI 283
>gi|163735798|ref|ZP_02143227.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
litoralis Och 149]
gi|161390884|gb|EDQ15224.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Roseobacter
litoralis Och 149]
Length = 415
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 96/280 (34%), Gaps = 14/280 (5%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+ + +++ C + A S +N VIT+ +I +R L L G
Sbjct: 12 RIKEFCTVLMVCATCSFAVPLGAQSLFSPVIEVNDGVITEFEIEQRQQFLILLNAPGSSR 71
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ELI E L+ Q + +G+ + ++ A L ++F + L++ GI
Sbjct: 72 QAVIEELINERLRAQAVANAGLELSDAAMQDGMIEFAGRVNLGVDEFKTVLEENGIAATT 131
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F+ ++ + W D + F + E EI + + L+ ++ P +
Sbjct: 132 FEDFVRVGVSWRDFIAARFGPRLQVSEEEIDQALGSTNGASNIQVLVSEIIIPAPPARAL 191
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-----LHPQFQN 248
V ++I + +A + + LE
Sbjct: 192 EVQEVAEQIA--------TTTSVEEFSDYARRFSATATRDQGGRLEWQALSNLPPSLRPL 243
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
LL + T P + V + D R+ G A +
Sbjct: 244 LLGLAPGEVTEPLNIPEAVALFQLRDIRETGASTPEYAAI 283
>gi|260428595|ref|ZP_05782574.1| ppic-type ppiase domain protein [Citreicella sp. SE45]
gi|260423087|gb|EEX16338.1| ppic-type ppiase domain protein [Citreicella sp. SE45]
Length = 410
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 94/238 (39%), Gaps = 5/238 (2%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
++ VIT ++ +R +L L G +A ++L+ + L+ Q + +GI +
Sbjct: 36 AIIVDEMVITGYELDQRARMLTLLNAPGNTNDLAREQLVDDRLRLQAAQNAGIEPTEEEI 95
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ A LS E+F + L + G+ + F+ ++ + W +V++ F+ + E
Sbjct: 96 LDGMSEFAGRAQLSREEFVTALGRAGVAEQTFRDFVRAGAAWRSLVQSRFVQQSQVSPAE 155
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + L+ ++ + ++ +RI + + ++
Sbjct: 156 VDRALAGNGGSSTVRVLLSEIIMPLSPQNVEEVRARAERIAQMTSE----SEFSAQARQY 211
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
++ + G+ + ++L PQ + +L S T P Q V + D + G
Sbjct: 212 SATATRDAGGRLPWRELNELPPQLRPMILGLSPGQVTQPIPIQGAVALFQLRDIEETG 269
Score = 36.9 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 5/116 (4%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNP 260
+ A ++ + C+ L A + + + L S L L K + +
Sbjct: 294 LAKARVLAQKVDR-CDDLYGIAKGQPEQVLERT-TLPPSQLPTDIAYELSKLDEGEVSTA 351
Query: 261 YVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G + ++ +C + E A + + +I Y+ +LR+NA I
Sbjct: 352 LTRSNGQSLMFLMLCGRTAAVSEDADRQQVEMGLRNQRISAMADGYLAQLRANARI 407
>gi|165975861|ref|YP_001651454.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|165875962|gb|ABY69010.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
Length = 316
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 54/320 (16%), Positives = 117/320 (36%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A+ R+ ++G + + + + L + +
Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQR---ALGKKANSEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++++I + L ++ ++++GI + V+ A G++ LD QGI
Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGIKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNL----------EMEIPANKQKMKNITVREYLIRT 182
++Q +A Q V +E K+KN+T ++ +
Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L N +Q + + + + D + + + + G Y
Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEE--AAKANSVDYLSAADGGDLGYNFLD 235
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F Q T P+ +Q G + + + G+ AY Q +
Sbjct: 236 IYDPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQ--GDRTEDAYNQRAYEQLVDKQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LR A + Y
Sbjct: 294 AQEAAKDWVKALRKTADVQY 313
>gi|32034721|ref|ZP_00134852.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207884|ref|YP_001053109.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus
pleuropneumoniae L20]
gi|126096676|gb|ABN73504.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 316
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 53/320 (16%), Positives = 118/320 (36%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A+ R+ ++G + + + + L + +
Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQR---ALGKKANSEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++++I + L ++ ++++G+ + + V+ A G++ LD QGI
Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYSKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNL----------EMEIPANKQKMKNITVREYLIRT 182
++Q +A Q V +E K+KN+T ++ +
Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L N +Q + + + + D + + + + G Y
Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEE--AAKANSVDYLSAADGGDLGYNFLD 235
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F Q T P+ +Q G + + + G+ AY Q +
Sbjct: 236 IYDPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQ--GDRTEDAYNQRAYEQLVDKQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LR A + Y
Sbjct: 294 AQEAAKDWVKALRKTADVQY 313
>gi|303249762|ref|ZP_07335966.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307245230|ref|ZP_07527321.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307251950|ref|ZP_07533851.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254177|ref|ZP_07536022.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258641|ref|ZP_07540376.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260875|ref|ZP_07542561.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|302651329|gb|EFL81481.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306853874|gb|EFM86088.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306860642|gb|EFM92654.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862877|gb|EFM94826.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867298|gb|EFM99151.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869442|gb|EFN01233.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 316
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 53/320 (16%), Positives = 117/320 (36%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A+ R+ ++G + + + + L + +
Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQR---ALGKKANSEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++++I + L ++ ++++G+ + V+ A G++ LD QGI
Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNL----------EMEIPANKQKMKNITVREYLIRT 182
++Q +A Q V +E K+KN+T ++ +
Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L N +Q + + + + D + + + + G Y
Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEE--AAKANSVDYLSAADGGDLGYNFLD 235
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F Q T P+ +Q G + + + G+ AY Q +
Sbjct: 236 IYDPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQ--GDRTEDAYNQRAYEQLVDKQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LR A + Y
Sbjct: 294 AQEAAKDWVKALRKTANVQY 313
>gi|84500986|ref|ZP_00999221.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597]
gi|84391053|gb|EAQ03471.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597]
Length = 402
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 106/287 (36%), Gaps = 7/287 (2%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90
+ + A S +N +V+T+ ++ +R +L+L + G+++ +A +LI + L+ Q
Sbjct: 16 TAQFAAAQSFSPAIKVNDKVVTEFELDQRTRMLRLFRTPGDIDALAADQLIDDRLRMQAA 75
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
E+ GI+ + + + A LSAE F + L + G+ F+ ++ W + ++
Sbjct: 76 EEIGISPSEDQIMAGMEEFAGRANLSAEQFVAALQQAGVAPESFRDFVRAGVAWRETIRA 135
Query: 151 DFMLKYGNLEMEIPANKQ-KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
F + E +I + + L+ + + + +RI+
Sbjct: 136 RFGPRIQISEQQIDRALASGGASGASVQVLMSEIFLPLTPGAEDETRALAQRIRG----- 190
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
+ + +S + G+ ++ S+L PQ ++ +L + P +
Sbjct: 191 MSAEAFARAAREHSSAPSAGAGGRVNWVPVSNLSPQLRSVILGLRPGQISEPVELDGQLA 250
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + A + + + R A +
Sbjct: 251 LFLLRAVEETENRAPSYAAVEYAAYYIAGGRSAQALERAARVRAQVD 297
>gi|307249622|ref|ZP_07531608.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858320|gb|EFM90390.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 316
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 53/320 (16%), Positives = 117/320 (36%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A+ R+ ++G + + + + L + +
Sbjct: 1 MKLISAKSLLVALVTAIGISQTATAIEERVVALVDGVPVMESQVQR---ALGKKANSEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++++I + L ++ ++++G+ + V+ A G++ LD QGI
Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNL----------EMEIPANKQKMKNITVREYLIRT 182
++Q +A Q V +E K+KN+T ++ +
Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L N +Q + + + + D + + + + G Y
Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEE--AAKANSVDYLSAADGGDLGYNFLD 235
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F Q T P+ +Q G + + + G+ AY Q +
Sbjct: 236 IYDPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQ--GDRTEDAYNQRAYEQLVDKQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LR A + Y
Sbjct: 294 AQEAAKDWVKALRKTADVQY 313
>gi|190149693|ref|YP_001968218.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252643|ref|ZP_07338806.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247402|ref|ZP_07529449.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307256445|ref|ZP_07538227.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307263001|ref|ZP_07544623.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914824|gb|ACE61076.1| peptidyl-prolyl cis-trans isomerase SurA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648611|gb|EFL78804.1| survival SurA-like protein [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306856099|gb|EFM88255.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306865075|gb|EFM96976.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306871627|gb|EFN03349.1| Survival protein SurA-like protein [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 316
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 53/320 (16%), Positives = 117/320 (36%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL++ +L+ +S + A+ R+ ++G + + + + L + +
Sbjct: 1 MKLISAKSLLVALVTAIGISQTAIAIEERVVALVDGVPVMESQVQR---ALGKKANSEAN 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A++++I + L ++ ++++G+ + V+ A G++ LD QGI
Sbjct: 58 HKAALEQIIDDLLVQKAVKEAGVKVNYAKVDQVIEDIAARNGITYGQLLDALDYQGITLE 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNL----------EMEIPANKQKMKNITVREYLIRT 182
++Q +A Q V +E K+KN+T ++ +
Sbjct: 118 QYRQQIAQQMAMEQVRHISIGKSIQVDPKDVHAYAKELLEKDKANGKLKNVTGVQHRVSH 177
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L N +Q + + + + D + + + + G Y
Sbjct: 178 ILIKTTPVLNDIQAKAKLAQIVADIKAGKTTFEE--AAKANSVDYLSAADGGDLGYNFLD 235
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F Q T P+ +Q G + + + G+ AY Q +
Sbjct: 236 IYDPAFAKAASTAKQEQITAPFKSQFGWHILKVTGTQQ--GDRTEDAYNQRAYEQLVDKQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LR A + Y
Sbjct: 294 AQEAAKDWVKALRKTADVQY 313
>gi|94499974|ref|ZP_01306509.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65]
gi|94427832|gb|EAT12807.1| Parvulin-like peptidyl-prolyl isomerase [Oceanobacter sp. RED65]
Length = 436
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 60/317 (18%), Positives = 128/317 (40%), Gaps = 18/317 (5%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ I+ +T +L IF + + + + S I ++ +I + ++ +RI +K Q
Sbjct: 11 TSIIQQITKTALLGIFAVSLPLQAQIQTIDS-IAAVVDDGIIMESELEQRIDTIKRQSQG 69
Query: 70 GEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L + ++ LI+E L+ Q E+SG+ +N + A+ GL+ +F
Sbjct: 70 MRLPPDDILQDQVLERLIIENLQLQMAERSGMRISDEQLNQTIINIAKQNGLTLREFKKA 129
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIR 181
L+K G+ ++ + + I +V + K E ++ N + K+ T EY +
Sbjct: 130 LEKDGVSYAQAREQIRRERIISEVQRYRVGSKINISEQDVDNFLNSVRGKSATAEEYRLG 189
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLES 240
+L +P + Q + + +LR D ++ + + + G + E+
Sbjct: 190 HILIQVPSQASRAQLKRAQNKAEDIVKKLRNGADFQQMAISQSEGRNALKGGDLGWRKEA 249
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI-----ALKAYLSAQNTP 294
+L F +++ + +NP + G I I DKR GG+ ++ Q
Sbjct: 250 ELPTLFADIVPDLKKGQVSNPIRSASGYHIIKISDKR--GGDTQMVRQTKARHILIQENE 307
Query: 295 TKIEKHEAEYVKKLRSN 311
+ + + + L
Sbjct: 308 IRNSQQAKKLINDLYKK 324
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 101/316 (31%), Gaps = 69/316 (21%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKS----GITFDSNTVNYFFVQH-------- 109
K + +G A +++ E + E+++ I V+ F
Sbjct: 126 FKKALEKDGVSYAQAREQIRRERI-ISEVQRYRVGSKINISEQDVDNFLNSVRGKSATAE 184
Query: 110 --------------ARNTGLSAED---------------FSSFLDKQGIGDNHFKQYLAI 140
A L F Q G N K
Sbjct: 185 EYRLGHILIQVPSQASRAQLKRAQNKAEDIVKKLRNGADFQQMAISQSEGRNALKG---G 241
Query: 141 QSIWPDVVK-----------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
W + ++ + + ++K+ VR+ R +
Sbjct: 242 DLGWRKEAELPTLFADIVPDLKKGQVSNPIRSASGYHIIKISDKRGGDTQMVRQTKARHI 301
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESD 241
L I +N+++N +K I D + +L+ D ++L K S S G ++ + D
Sbjct: 302 L--IQENEIRNSQQAKKLINDLYK-KLKNGADFDELAKEYSDDPGSKLSGGDLGWVNQGD 358
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEK 299
+ P F+ + ++ + P+ ++ G + + D R GE + + E+
Sbjct: 359 MVPAFEQTMNATKKGQISEPFKSRFGWHVLQVTDYRQKDVGEEIQRNQARQLLYSRRFEE 418
Query: 300 HEAEYVKKLRSNAIIH 315
+++++R++A +
Sbjct: 419 ELPIWLRQIRADAYVE 434
>gi|254438097|ref|ZP_05051591.1| SurA N-terminal domain family [Octadecabacter antarcticus 307]
gi|198253543|gb|EDY77857.1| SurA N-terminal domain family [Octadecabacter antarcticus 307]
Length = 383
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 5/244 (2%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
A +N V+++ +I +R+ALL + G LE A ++LI E LK + ++ + +
Sbjct: 2 TAAQFAPAIIVNDSVVSEFEIDQRVALLLAFRTPGNLEDTAHEQLIQERLKLEALDSARL 61
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + A L + F + L + G+ + F+ ++ + W D ++ F
Sbjct: 62 RITDEGLVLAMTEFATRANLELDQFITMLGQSGVAEETFRDFVRVNVSWRDFIRTRFNDS 121
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E +I + + E L+ ++ P Q +RI
Sbjct: 122 AQVSEADIDLALGQSGASSSIEVLLNEIIIPAPAESAQQAMATAERIAQL----TTTSAF 177
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ ++ G+ +L S+ + LL + T P GV +
Sbjct: 178 EAEARSVSALPSRTRGGRLDWLPISNYPAGLRGLLLNLAPGEVTAPIPITDGVALFQMRG 237
Query: 275 KRDL 278
R++
Sbjct: 238 LREV 241
>gi|84684877|ref|ZP_01012777.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667212|gb|EAQ13682.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase
[Rhodobacterales bacterium HTCC2654]
Length = 414
Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 118/298 (39%), Gaps = 8/298 (2%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
++LT + ++ + + +N +T + ++R+A L++ G++
Sbjct: 16 RILTLCASAALGMMMAGSPATAQGQFVPV-AKVNDSAVTVYERNQRMAFLRILNAPGDIT 74
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++A+ +LI E ++ E E+ GIT D V + A L E F +FL + GI
Sbjct: 75 QLALDQLINERIQLAEAERMGITADPEAVQNGMAEFAARGNLDVEQFGAFLAQAGIAFET 134
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F+ ++ +W +V + F+ + E EI + + ++L+ ++
Sbjct: 135 FRDFVTAGIVWREVARAKFLPQVSITESEIDRAYAEAEPQPGEKFLLTEIVLP----ASS 190
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKK 252
+ R + S++ ++ K S + ++ G+ ++ L PQ Q+ ++
Sbjct: 191 DLSLKASRARADRLSKITTAEEFADAAKRFSVVPSRLNAGERDWVDVQALPPQAQSAVRA 250
Query: 253 S-QNNTTNPYVTQK-GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + + P + GV + D+ + + A ++ ++
Sbjct: 251 TREGRASRPVIIPDVGVAVYFVRDRETIRSTKVGELLEYAAFFVPGGQEEANRIRAEV 308
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 14/122 (11%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF------QNLLKKSQN 255
++A R + + C+ L A + A L+ +L L
Sbjct: 298 QEEANRIRAEV-QICDDLYPIARGL------PADQLVREELPTGAVPARYRAELANLDPG 350
Query: 256 NTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ G + ++ +C++R+ + +A ++ +I + + + LR+NA I
Sbjct: 351 EVSTRLTAGNGTLVFLMLCNRRNDVPDSVSRAQIADALRNQRIGAYANDLLADLRANAHI 410
Query: 315 HY 316
Y
Sbjct: 411 EY 412
>gi|300023220|ref|YP_003755831.1| SurA domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525041|gb|ADJ23510.1| SurA domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 442
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 6/261 (2%)
Query: 58 KRIALLKLQKIN-GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+R A +K + ++K A++ELI E LK QE +K +T + + V+ A ++
Sbjct: 185 QREAFESARKASLPAVKKQAIEELIDERLKLQEAKKQSVTIEDSEVDRVITGIAERNKMT 244
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ F+ + G + K + W +VV+ F ++
Sbjct: 245 LDQFTK---QVGGSIDPMKSRIRAALSWNEVVRRRFGPLINVNTKDVDKMVATAAGSAQE 301
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ ++ I K + + +RI++AE+ R R DC A+ I
Sbjct: 302 DVELQIQRVQIMLPKKMEEHGIAQRIEEAEKVRSRF-TDCKSTAAAATGIPGAKFENIGK 360
Query: 237 LLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
S L + LL S P V VE +C + + + + +
Sbjct: 361 RKSSTLPEPTRTLLLNASDGEMLPPSVGDGAVELYVVCGRDSVKSDADKRTQAEGELKQK 420
Query: 296 KIEKHEAEYVKKLRSNAIIHY 316
+ E Y+K LR +A I Y
Sbjct: 421 EFEVMARRYLKDLREDAHIEY 441
>gi|255264369|ref|ZP_05343711.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62]
gi|255106704|gb|EET49378.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62]
Length = 404
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 94/268 (35%), Gaps = 7/268 (2%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++ + LI+ + + S I +N EVIT ++ +R LL + + G L
Sbjct: 1 MRRILLGLALILTSLTTAPAMAQGLFSPAI--IVNDEVITRYELDQRAKLLGVLRTPGNL 58
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++A ++LI + LK + I +G+ + + A L F+ L++ G+
Sbjct: 59 SELAQEQLIEDRLKARLIRNAGLQLTGDGLQQALSDFAGRANLDLATFTQVLNQNGVEQE 118
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ +A W + ++ + + + EI LI ++
Sbjct: 119 TLRDLVATGVSWREYIRTRYGNRAQITDNEIDRALSSTGGRAGIRVLISEIIMDARPQVA 178
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ +RI + + + + + G+ +L SDL P Q +L
Sbjct: 179 TSAQARAERISKLTSTAA----FSAEARRVSLLPSRENGGRLDWLPLSDLPPTVQPIILN 234
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG 279
S T P + + +
Sbjct: 235 LSPGEITPPLPIPNALALFQLRAIEETS 262
>gi|119383650|ref|YP_914706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
gi|119373417|gb|ABL69010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
Length = 423
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 90/236 (38%), Gaps = 7/236 (2%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+N V+T ++ +R+ L++ + A Q LI + L+ + GI ++
Sbjct: 33 VYVNDSVVTRYELDQRMRFLQILRAPDGDRASAEQALIDDRLRLFAARQMGIAASDAQID 92
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ A + E+F+ L + G+ F+ ++A +W ++V+ + + + E+
Sbjct: 93 AGLAEFAGRANMDVEEFTRALAQAGVEQQTFRDFIAAGVVWRELVRQRLVPQVQVSDAEL 152
Query: 164 PANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
Q+ ++ + + ++ P Q R+ ++ +R D +
Sbjct: 153 DQEMQRVIETPRITHVALSELIIPAPPG----QEAQAMRLAESLVQSVRSEADFAAAARQ 208
Query: 223 ASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
S + G+ + +L P + ++ Q + P + V + D R
Sbjct: 209 HSATPSAENGGRLPWAPLENLPPSLRPIILSMQNGQISQPLTVEGAVVLFYLRDSR 264
>gi|126725343|ref|ZP_01741185.1| PPIC-type PPIASE domain [Rhodobacterales bacterium HTCC2150]
gi|126704547|gb|EBA03638.1| PPIC-type PPIASE domain [Rhodobacterales bacterium HTCC2150]
Length = 407
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 95/272 (34%), Gaps = 9/272 (3%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
K+L +LI + + +A + T++ +T +I +R A L + + G
Sbjct: 4 SIKKILVIGALLIAPAQISLAQSNPFAAA----VTVDNRAVTYFEIEQRAAFLDVLRAPG 59
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K A + L+ E L+ + GI + + + A+ L +F + + GI
Sbjct: 60 NVLKTARETLVNERLQLNAAQSLGIQINQEELAVGMAEFAKRANLKTAEFIKAIGQDGIE 119
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F+ ++ W +V+N F+ + E EI L+ ++
Sbjct: 120 PETFQDFVRAGLTWRKLVQNRFVGRAQVSEDEIDRALALSSRKGGARVLLSEIVLPA--- 176
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNL 249
+ + K + + ++ + S + G+ +L ++L P +
Sbjct: 177 RNPEEAEASKNLAAELKDTIKTQSAFESAARTYSVSGSAANGGRITWLPLANLPPSIVPV 236
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
L ++ + + + ++
Sbjct: 237 LLTLKPGEVSDTVPVENAISMFQVRGLQEFDA 268
>gi|33152289|ref|NP_873642.1| peptidyl-prolyl cis-trans isomerase [Haemophilus ducreyi 35000HP]
gi|33148512|gb|AAP96031.1| survival protein SurA-like protein [Haemophilus ducreyi 35000HP]
Length = 317
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/320 (18%), Positives = 113/320 (35%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL + +L+ +S + A + T+N + + + +LL QK +
Sbjct: 1 MKLNSAKSLLVALVTAVSLSQSAMAWEEHVVATVNNIPVMESQVQ---SLLGQQKNSKTD 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K+A++ +I + L ++ I +GI D V+ A + G++ +D QGI +
Sbjct: 58 RKMAIEHIIDDILVQKTIADAGIQVDYKLVDKAIEDIAASNGITYGQLLDAIDNQGISLD 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN----------LEMEIPANKQKMKNITVREYLIRT 182
++ +A Q V +E K K+K +Y I
Sbjct: 118 QYRGQIAQQMAMEQVRHMSISQSIQLDPNEVQTLAKKMLEEDKAKGKLKKSMGTQYRISH 177
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLES 240
+L + N + ++ + K S I G Y
Sbjct: 178 ILIKT--TPVLNDAKAKAKLMRIAADIKAGKTTFEQAAKANSIDYISAADGGDLGYNFLD 235
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTK 296
P F + K QN + P+ +Q G + + + + +Y +
Sbjct: 236 IYDPTFAKIANKAKQNQISAPFKSQFGWHILKVTATQ--KADRTEDSYNQFAYELLANQQ 293
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
++ ++VK LRS+A I Y
Sbjct: 294 GQEIAKDWVKILRSSADIQY 313
>gi|219870954|ref|YP_002475329.1| peptidyl-prolyl cis-trans isomerase SurA [Haemophilus parasuis
SH0165]
gi|219691158|gb|ACL32381.1| peptidyl-prolyl cis-trans isomerase SurA [Haemophilus parasuis
SH0165]
Length = 312
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 59/325 (18%), Positives = 116/325 (35%), Gaps = 31/325 (9%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ L F L ++ S R+ T++G I + + L +
Sbjct: 3 FTQVKSLFIAGFAL--------FAFSSANAEERVVATVDGYPIMQSQVKQ---ALGKKAN 51
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
K A++ +I + + ++ I++SGI D V+ A G++ LD QG
Sbjct: 52 TEANRKAALETIIDDFVVQRAIKESGIKVDYAYVDQMMEDVAAQNGITYGQLLDALDYQG 111
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGN----------LEMEIPANKQKMKNITVREY 178
I + ++Q LA Q + V + ++ ++ ++ EY
Sbjct: 112 ISLSQYRQQLAHQLLMEQVRQQSIGNSIQVDPKDVQSLAKDMLDKAKTNGTLETVSATEY 171
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY 236
I +L + N + ++ + K S I + G +
Sbjct: 172 RISHILIKT--TPILNDMQAKAKLLSITADIKSGKITFEEAAKINSVDYISGIDGGDLGF 229
Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQN 292
F N+ KS+ + ++P+ +Q G + + D R G+ AYL Q
Sbjct: 230 NFLDAYDSTFANIASKSKIDVISSPFKSQFGWHILKVTDTRR--GDRTEDAYLQKAYEQL 287
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317
+++ +++K LRS I Y+
Sbjct: 288 IDKQVQVASKDWIKVLRSKLDIKYF 312
>gi|163746451|ref|ZP_02153809.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Oceanibulbus
indolifex HEL-45]
gi|161380336|gb|EDQ04747.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Oceanibulbus
indolifex HEL-45]
Length = 412
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 95/266 (35%), Gaps = 9/266 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ L + ++ + + +N E IT ++ +R ++L G
Sbjct: 13 MRGTAALALALVIGQSAAAQNLFAP--VARVNDEAITGYEVQQRQRFMQLIGAPGTDSNS 70
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ LI + L+ Q +E++G+ + + + A LS E+F L + I + F+
Sbjct: 71 VIDSLIEDRLRGQILEQAGLEVTPDGIRAGMTEFAGRADLSTEEFLKVLGQAQISEETFR 130
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI-PDNKLQN 194
++ I + W D+++ + + + E+ + L+ ++ P N Q
Sbjct: 131 DFIVISAAWRDLIRARYNGRVNITDEEVERALGSSRGNNGLRVLLSEIIIPAPPQNADQV 190
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKS 253
++ + + E+ ++++ GK + +L + + L +
Sbjct: 191 NALAERIAQSSSEAEFSSY-----ASQYSATASRERGGKMPWTPLENLPVSLRPILLALA 245
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLG 279
T P V + + G
Sbjct: 246 PGEVTAPLPIPNAVALFQLRGIEETG 271
>gi|254463317|ref|ZP_05076733.1| peptidyl-prolyl cis-trans isomerase SurA, putative [Rhodobacterales
bacterium HTCC2083]
gi|206679906|gb|EDZ44393.1| peptidyl-prolyl cis-trans isomerase SurA, putative
[Rhodobacteraceae bacterium HTCC2083]
Length = 416
Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 96/271 (35%), Gaps = 8/271 (2%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTT---INGEVITDGDISKRIALLKLQK 67
F T + + ++ + + T +N IT+ +I +R+ L L +
Sbjct: 7 SFKSFTRTCAHALACGALLTFGSVQYSNAQGLFATAIKVNDRSITNFEIDERVKFLGLLR 66
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
G+ K+A ++LI + LK + GI+ V+ + A L +F ++
Sbjct: 67 TPGDHRKLAREQLIEDRLKLGAAQSVGISPTQEEVDAGMGEFAGRVNLETAEFIKAINAG 126
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ ++ F+ ++ W +V+ F + E ++ + L+ ++
Sbjct: 127 GVSEDAFRAFVLSGLAWRQLVQAKFGSRITVSEEDVDRLIAASGSGGGIRVLLSEIIMPA 186
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQF 246
P + Q + + ++ ++++ G+ +L + P
Sbjct: 187 PPS----QAAAVQERAERISQITSTAAFASEARRYSASPSKARSGRLDWLPITQLPAPLR 242
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
LL + T+P Q + + +
Sbjct: 243 PLLLGLAPGEITDPIPLQNAIALFQLRGIEE 273
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKK 252
+ G + A + + R+ + C+ L A D S+ S++ L K
Sbjct: 292 SGGRTDATLAAARKVQSRVDR-CDDLYGVAKG-QDPSVLDRDSKKPSEIPTDIALELAKM 349
Query: 253 SQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
T+ G + + +C + + +A LS ++ Y+++LR+
Sbjct: 350 DPGETSTALTRADGQTLVVLMLCGRTPELEQEVDRAELSLGLQNQRLASFSKGYLEELRA 409
Query: 311 NAII 314
+A I
Sbjct: 410 DARI 413
>gi|167854677|ref|ZP_02477457.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
adenyltransferase [Haemophilus parasuis 29755]
gi|167854214|gb|EDS25448.1| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate
adenyltransferase [Haemophilus parasuis 29755]
Length = 312
Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats.
Identities = 59/325 (18%), Positives = 116/325 (35%), Gaps = 31/325 (9%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ L F L ++ S R+ T++G I + + L +
Sbjct: 3 FTQVKSLFIAGFAL--------FAFSSANAEERVVATVDGYPIMQSQVKQ---ALGKKAN 51
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
K A++ +I + + ++ I++SGI D V+ A G++ LD QG
Sbjct: 52 TEANRKAALETIIDDFVVQRAIKESGIKVDYAYVDQMMEDVAAQNGITYGQLLDALDYQG 111
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGN----------LEMEIPANKQKMKNITVREY 178
I + ++Q LA Q + V + ++ ++ ++ EY
Sbjct: 112 ISLSQYRQQLAHQLLMEQVRQQSIGNSIQVDPKDVQSLAKDMLDKAKINGTLETVSATEY 171
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY 236
I +L + N + ++ + K S I + G +
Sbjct: 172 RISHILIKT--TPILNDMQAKAKLLSITADIKSGKITFEEAAKINSVDYISGIDGGDLGF 229
Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQN 292
F N+ KS+ + ++P+ +Q G + + D R G+ AYL Q
Sbjct: 230 NFLDAYDSTFANIASKSKIDVISSPFKSQFGWHILKVTDTRR--GDRTEDAYLQRAYEQL 287
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317
+++ +++K LRS I Y+
Sbjct: 288 IDKQVQVASKDWIKVLRSKLDIKYF 312
>gi|315500015|ref|YP_004088818.1| ppic-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis
excentricus CB 48]
gi|315418027|gb|ADU14667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis
excentricus CB 48]
Length = 423
Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 113/277 (40%), Gaps = 10/277 (3%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------QKINGELEKI 75
+ + ++ + + +N ++I+ D+ +R+ LL + Q+ ++
Sbjct: 24 AVAQTTAQPAAQARPLGEGVVALVNDKLISSYDLKQRMLLLIITSGVQVTQQNYAAFQQQ 83
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A++ LI E L+ E + + ++ A+ +GLS + + L + GI +
Sbjct: 84 ALRALIDEHLQLAEADHFKLNVSDEEIDEEIANMAQQSGLSKDQLLAELKRAGIEAQTLR 143
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQN 194
+ + W +V F K + ++ A K+ + +YL+ +L Q
Sbjct: 144 DQIKAEIAWGQLVNGRFRPKARVGKDQVDAFMTKLTEDSQKPQYLVAEILIDPEVAGGQK 203
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KS 253
+ + + ++ + + +F++ + G A +L+ + P+ + +LK +
Sbjct: 204 EAEAGAQ-QLFDQIAQGVAPFQSVARQFSNAPSAANGGDAGWLVSGTIDPKIETVLKGMN 262
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
T P VT +GV + +K++ + ++ +A
Sbjct: 263 PGQMTRPIVTDEGVYIYYLREKKEGKADAKVRLKQAA 299
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQK 265
R + P C+ L VS+ + SDL P++ + L+ +T P
Sbjct: 314 SFRAKYPT-CDALNNE-KGNGQVSVADLGFTALSDLKPEYASALQPLKVGQSTEPMKNTM 371
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +CDK G ++ + + + T K+ Y++ +R A I
Sbjct: 372 NINVVYVCDKTAAGDDVPSREQVEQRLTQQKVAMLGRRYLRDIRDGATIE 421
>gi|254511943|ref|ZP_05124010.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535654|gb|EEE38642.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11]
Length = 417
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 100/289 (34%), Gaps = 9/289 (3%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRI 60
++ + + F++ +L + + A + +N +++T ++ +R
Sbjct: 2 QLISGFTKFLRSGCRASILPVMALALTAMATPQAQGQSLFSPAIRVNQDIVTWYELEQRQ 61
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
L+L E + LI + L+KQ + ++GI V A LS+E+F
Sbjct: 62 QFLELLGAPNSSEIEVREALIDDRLRKQVMREAGIEAAPEAVETGIDDIAARGNLSSEEF 121
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L+ G+ + ++A Q W D + F+ + E EI + ++ L
Sbjct: 122 LQLLNDAGVSRETVRDFVADQLTWRDYISARFLSQARPSEDEINRALGQGGGGGLQVLLS 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
++ P Q + + + +E + G+ +L S
Sbjct: 182 EIIIPVTPQTLSQAEALADEISQLPDEQSFASAAAQYSAADTR-----TNGGRLDWLSLS 236
Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+L P Q +L T P V + R++ + +
Sbjct: 237 NLPPALQPVILGLKNGEITEPLSLSNAVALFQMRGIREVATAAPRYSEI 285
>gi|146277165|ref|YP_001167324.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|145555406|gb|ABP70019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
Length = 405
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 101/276 (36%), Gaps = 7/276 (2%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+K ++ + + + A + + R +N VIT+ + +R+ L +
Sbjct: 1 MKTFVSHCLAFVMASGLTFASAVDAPAQNLFAPRLVVNDRVITNYEFEQRVRFLTILGAT 60
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
G+LEK A+ LI + ++ E++G+ + V + A LSAE F + L K G+
Sbjct: 61 GDLEKQAMDALIDDKIRLDAAERAGLKATESQVTEGMEEFAGRANLSAEAFVAELGKAGV 120
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F+ ++ +W ++++ F + E I + T L+ ++ P
Sbjct: 121 APETFRDFVHAGLVWRELMRARFGAEARPSETAIDRAITRQTRRTTIRLLLSEIIIPTPP 180
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQFQN 248
+ + + + I+ + + +S G+ ++ L++
Sbjct: 181 GQEADALALAEEIRRTAQGETAFAQAARSYSASSSAERG---GRIDWVPLQNLPPSLGPL 237
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
LL S ++P V + +
Sbjct: 238 LLTLSPGQVSDPLKIPNAVALFQVRAIDETSEPAPA 273
>gi|329850880|ref|ZP_08265725.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19]
gi|328841195|gb|EGF90766.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19]
Length = 445
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 103/268 (38%), Gaps = 10/268 (3%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-------QKINGELEKIAVQELIVET 84
+ +S + ++N ++IT D+ +R+ LL + Q+ ++ A+ L+ E
Sbjct: 49 APNLPQLSEGMLISVNDDMITSYDLKQRMLLLIVTSGVQVTQENYAAFQQQAINGLVDER 108
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L+ QE++ + D +N + A +GL+ E + L K GI K + ++ W
Sbjct: 109 LQMQELDHWKVKVDDADINEELERMASQSGLTGEQLLTELKKVGIEPATLKSQIRAETGW 168
Query: 145 PDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+V + ++ + + + ++YL+ + + +
Sbjct: 169 SRLVGGRYQSNAKVGSAQVDGTMDRIVADGQKQQYLVAEIFLDPAQAGGIENAQKGAQ-Q 227
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYV 262
+ + R +F++ G A +L+ +L P + L + T P
Sbjct: 228 LYNQLQARAAPFQAVARQFSNAPSAAQGGDAGWLVADNLDPAIEVALAAAQPGEMTPPIT 287
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSA 290
T+ GV + K G++ + +A
Sbjct: 288 TEDGVYIYLLRQKTTGDGDMVMHLKQAA 315
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+IP ++ V R ++ C+ L++ A ++ + S L P
Sbjct: 315 AIPLAPNASESEVANAQSALLSFRSKVS-SCDALDE-AKVPGNIQVVDLGEAQLSTLLPD 372
Query: 246 FQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ LK + + P + + + +CD+R G + + +Q T++ Y
Sbjct: 373 YVATLKPLKGKQVSQPVRNSQFMNVVYVCDRRLAGENALTREQVESQLVNTRLAMLGKRY 432
Query: 305 VKKLRSNAIIHYY 317
+++LR +A I +
Sbjct: 433 LRELRGSATIENH 445
>gi|89070359|ref|ZP_01157666.1| PPIC-type PPIASE domain protein [Oceanicola granulosus HTCC2516]
gi|89044006|gb|EAR50181.1| PPIC-type PPIASE domain protein [Oceanicola granulosus HTCC2516]
Length = 405
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 91/243 (37%), Gaps = 4/243 (1%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T+N I+ +I +R LL++ G+LE +A ++L+ + LK E++++G+ ++
Sbjct: 31 AITVNDSAISFYEIDQRAKLLRVFNTPGDLEALAREQLVEDRLKLAELDRAGLQLSEESL 90
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
A L E F L + G+ + + ++ + W D ++ + + E +
Sbjct: 91 AAEMEAFAGRADLPYEQFIGVLAEAGVAEETLRDFVRVGVSWRDYIRTRYRGRAEVNEAD 150
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ N + I +L I + + I + ++
Sbjct: 151 VDQTLAAPPNGGTQ---IEVLLNEIIIPAPPPRAAEAQAIAERISQTTSTAAFEAAAREY 207
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
++ G+ +L ++ P Q +L + T P G+ + R++ G
Sbjct: 208 SALPSRERGGRLDWLPIANYPPPIQALVLGLAPGEVTAPLPIPNGIALFQLRAVREVAGS 267
Query: 282 IAL 284
Sbjct: 268 RPQ 270
>gi|254417887|ref|ZP_05031611.1| SurA N-terminal domain family [Brevundimonas sp. BAL3]
gi|196184064|gb|EDX79040.1| SurA N-terminal domain family [Brevundimonas sp. BAL3]
Length = 393
Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 101/253 (39%), Gaps = 10/253 (3%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL----KLQKINGEL---EKIAVQELIVETLKKQEI 90
M+ I T+N ++IT D+ +++ +L ++Q L ++ A+ LI + LK QEI
Sbjct: 1 MADGIVATVNDKIITGFDLRQQMLMLIASSQVQPTEQNLPAIQQAALNRLIEQRLKAQEI 60
Query: 91 EKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K + ++ Q AR G++ + FL + GI N F++ L + W +V
Sbjct: 61 TKFESLKVTDQEIDEEIAQMARQAGVTPAAYMEFLQQGGIQPNAFRESLRTEIGWGQLVP 120
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
F + +++ +++ + +YLI + Q R +
Sbjct: 121 GRFNSRARPSTLQVDQEVRRLNDAAAQPQYLIGEIYIEAARVGGQEAAMNGARQLVQQII 180
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267
+ + + A G A ++++ + P Q + + +NP GV
Sbjct: 181 QGAPFQAVAQQFSSAPSASARVPGDAGWVVKGTVQPALQTIFDQLQPGQLSNPIAVDGGV 240
Query: 268 EYIAICDKRDLGG 280
I + DKRD
Sbjct: 241 YIIYMRDKRDGAA 253
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ K +R ++ +P+ + R + LR +C+ + A
Sbjct: 246 RDKRDGAATSLVSLRQLMVELPETASEADLAAATRTLEG----LRQGLNCDNILSQARAT 301
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
V ++L PQFQ + + + + P T G+ +A+C +R G E +
Sbjct: 302 QGVIGADLGESDVANLAPQFQQFARTGEIGSVSTPIRTPLGLHLVAVCGRRVGGPEAPNR 361
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + E Y++ LRS+A+I +
Sbjct: 362 QQVEGRLRSQNLAVLERRYLRDLRSDALIEF 392
>gi|330878394|gb|EGH12543.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963847|gb|EGH64107.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 440
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 112/294 (38%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+L+ + LI+E L+ Q E+SGI + +N A+ +S +
Sbjct: 58 IAKRGSGVPPAADLQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVD 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + E E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQ 235
E+ + +L + PD+ + + +L+ D K +S + + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 90/315 (28%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ K + R+ +D L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F++++ + + P+ T G + + +R A + K ++
Sbjct: 355 VPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|302130724|ref|ZP_07256714.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 440
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 111/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAADLQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ ++ + + I V + + E E+ + K
Sbjct: 118 QFRAALAHDGLSYEDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQ 235
E+ + +L + PD+ + + +L+ D K +S + + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 90/315 (28%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYEDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ K + R+ +D L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F++++ + + P+ T G + + +R A + K ++
Sbjct: 355 VPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|331017629|gb|EGH97685.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 440
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 111/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAADLQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ ++ + + I V + + E E+ + K
Sbjct: 118 QFRAALAHDGLSYEDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQ 235
E+ + +L + PD+ + + +L+ D K +S + + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/315 (12%), Positives = 90/315 (28%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYEDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + R+ +D L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRSEEATRLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F++++ + + P+ T G + + +R A + K ++
Sbjct: 355 VPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|237803361|ref|ZP_04590946.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331025342|gb|EGI05398.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 440
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 110/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVAAIVDNDVIMKSQVDQRVHEVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+K + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQKQVLDRLILENLQLQMGERSGIRVSDDELNQAIASIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ + ++ + + I V + + E E+ + K
Sbjct: 118 QFRAALIHDGVSYDDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + + + + D KL S + G
Sbjct: 178 EFHLANILIATPDSASSDVIQAAALKAKSIYDQAKKGADFAKLAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 96/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL+ + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALIHDGVSYDDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 177
Query: 119 DF-------------------SSFLDKQGIGDNHFK----QYLAI------------QSI 143
+F ++ L + I D K LA
Sbjct: 178 EFHLANILIATPDSASSDVIQAAALKAKSIYDQAKKGADFAKLAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ K + R+ +D L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRSEEATKLLAQKIYERIENGEDFAALAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ + + P+ T G + + +R A + + K ++
Sbjct: 355 VPEFREVMNSTPQGTLSKPFKTAYGWHVLEVLGRRATDATGQAREQQALSVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|312113659|ref|YP_004011255.1| hypothetical protein Rvan_0880 [Rhodomicrobium vannielii ATCC
17100]
gi|311218788|gb|ADP70156.1| hypothetical protein Rvan_0880 [Rhodomicrobium vannielii ATCC
17100]
Length = 365
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 63/340 (18%), Positives = 116/340 (34%), Gaps = 66/340 (19%)
Query: 37 AMSSRIRTTINGEVITDGDISK----------------------------RIALLK---- 64
A + I +N E IT GDI++ R ++K
Sbjct: 27 AKAQNIVVLVNDEPITSGDIAQRTRWMARTSGFGDRMKALLTGDSIKERFRQLMIKANPR 86
Query: 65 ------------------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
L + G K ++ LI + LK Q ++ IT
Sbjct: 87 SQAEAEQTAERIKKQLVEEAKGRVLSEGGGTSRKQVIETLIEDKLKLQAAKRLEITVSDK 146
Query: 101 TVNYFFVQHARNTGLSAEDFS---SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
V Q A + + GI + + Q W DV++ + +
Sbjct: 147 EVEEVLAQRAGGGDGKKPQLNEFYQQFEADGISRKTVQNIIRAQLAWRDVIRRQYGPRIA 206
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ +P + QK + + ++ +R + ++ ++ V +R+ +AE R + C
Sbjct: 207 AMLAALPTDDQKPADGDI-QFDVRVLRLAV---AGSDERAVSQRMMEAENLRSKF-TSCA 261
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L K A + D S+ + + Q +LK S+ T P + VE AIC K
Sbjct: 262 DLPKRAKLVADASVKAVDKAKLASFNKDAQPLILKASEGQMTPPILVSGAVEAYAICKKG 321
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ A + ++ Y+++L+ +A I Y
Sbjct: 322 VVLKRNPA-AEQKPDARAQEYDRFSRRYLQELKKSASIDY 360
>gi|301382733|ref|ZP_07231151.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato Max13]
gi|302063472|ref|ZP_07255013.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato K40]
Length = 440
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 111/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMGQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAADLQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ ++ + + I V + + E E+ + K
Sbjct: 118 QFRAALAHDGLSYEDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQ 235
E+ + +L + PD+ + + +L+ D K +S + + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 90/315 (28%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYEDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ K + R+ +D L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F++++ + + P+ T G + + +R A + K ++
Sbjct: 355 VPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|327479275|gb|AEA82585.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri DSM
4166]
Length = 435
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 58/320 (18%), Positives = 123/320 (38%), Gaps = 15/320 (4%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-- 64
T LSDF++ L +L+ + + R+ ++ +VI + +RI ++
Sbjct: 3 TKLSDFLRPLLLGTLLLGSATLTTAALAQVQPLDRVVAIVDNDVIMQSQLDQRIQEVRQT 62
Query: 65 LQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
++K E L++ ++ LI E L+ Q E+SG+ +N A+ ++ E
Sbjct: 63 IEKRGAEVPPNEVLQQQVLERLISENLQLQIGERSGVRISDEELNQAMATIAQRNNMTPE 122
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F L + G+ ++ + + I V + + E E+ K
Sbjct: 123 QFREALARDGLSPETAREQIRREMIISRVRQRRVAERIQVSEQEVQNFLASDLGKLQLSE 182
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQ 235
EY + +L +P+ +R+ +L+ D +L ++ + + G
Sbjct: 183 EYHLANILIPVPEAADSATIQAAERMARDTHEQLQKGADFARLAVARSASENALEGGDMG 242
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQ 291
+ + L P F +L+++ T P T G + + +KR + ++ +
Sbjct: 243 WRKAAQLPPPFDSLVRELAVGEFTEPVRTPPGFIIVKVLEKRGGETQVRDEVHVRHILIK 302
Query: 292 NTPTKIEKHEAEYVKKLRSN 311
+ + E VK+LR
Sbjct: 303 PSAIRSEDEARLLVKRLRER 322
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 62/156 (39%), Gaps = 9/156 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFA 223
K+ + E +R +L + +++ + KR+++ R+ +D +L +
Sbjct: 281 LEKRGGETQVRDEVHVRHILIKPSAIRSEDEARLLVKRLRE----RILAGEDFAELARNF 336
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL-G 279
S+ + G ++ + L P+F+ ++ + + P+ + G + + +R
Sbjct: 337 SEDPGSALNGGDLNWIDPNSLVPEFRQVMANTASGELSQPFQSPYGWHILEVLGRRATDT 396
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E + + ++ +++++R A +
Sbjct: 397 SEEFREQQARNLLRNRRYDEELQAWLRQIRDEAYVE 432
>gi|89054302|ref|YP_509753.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Jannaschia sp. CCS1]
gi|88863851|gb|ABD54728.1| PPIC-type PPIASE domain [Jannaschia sp. CCS1]
Length = 422
Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 91/268 (33%), Gaps = 8/268 (2%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
T+ L P +N ++T+ +I +RI L++ G+L + A+
Sbjct: 22 TFLCLGCALSAPFGGQAHAQNPFSAAVEVNDTIVTNFEIGQRIRFLQVLNAQGDLREQAI 81
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
+ L+ E L+ G + + A L E F + ++GI + +
Sbjct: 82 EALVNERLQLDAALAVGAEASPEAIETGLEEFAGRANLGPEQFLRQMAQEGIAPETVRDF 141
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK--NITVREYLIRTVLFSIPDNKLQNQ 195
+A W +VV+ F E ++ + + L ++ PDN+ +
Sbjct: 142 VANGITWRNVVRARFGPTIDITEEDVERALELGTVLGGGIEILLAEIIIPVTPDNQANLE 201
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQ 254
+ + + + + +F++ + G + +L ++ ++
Sbjct: 202 SELS---RLGRDVAGNVERFSEAARRFSAAPTREAGGVTGWRPLGELPEGLRDRFMQMGY 258
Query: 255 NNTTNPYVTQKG--VEYIAICDKRDLGG 280
T+P G +R++
Sbjct: 259 AQVTDPVSLGGGQAFALFQYRGQREVTS 286
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 19/190 (10%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS-IPD 189
+ +Q + V + G + + + +T I + + +P
Sbjct: 246 PEGLRDRF-MQMGYAQVTD---PVSLGGGQAFALFQYRGQREVTSPRLPITAIDYVTVPI 301
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ R D RL + F + + S +
Sbjct: 302 SGG--------RTPDGLAEAARLDAAVDVCNDFNGVLPGGFERHT--VPPSQVPEDIALA 351
Query: 250 LKKSQNNTTNPYVTQKG---VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ N+ + VT+ G + + +CD+ E + + Q ++++ A Y++
Sbjct: 352 IRTLDNHEMSTAVTRNGGTVLLAVMLCDRVSAEPEAGVDR-IREQLFGQQLQRLAANYLE 410
Query: 307 KLRSNAIIHY 316
+LR+ A I+Y
Sbjct: 411 ELRAEARINY 420
>gi|330980962|gb|EGH79065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. aptata str. DSM 50252]
Length = 442
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/296 (17%), Positives = 109/296 (36%), Gaps = 17/296 (5%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 VKTKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQ 57
Query: 65 LQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
L+ + LI+E L+ Q E+SGI +N A+ +S
Sbjct: 58 QTIAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMS 117
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
E F + L G+ N ++ + + I V + + + E+ K
Sbjct: 118 VEQFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQL 177
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGK 233
E+ + +L + PD+ + +L+ D +L +S + G
Sbjct: 178 SEEFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGD 237
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR GE ++ +
Sbjct: 238 MGWRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGEAQMRDEV 293
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 96/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 122 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDMGKAQLS-E 179
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 180 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMG 239
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 240 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGEAQMRDEVHVRHIL 299
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 300 IKPSE---IRNEAETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 356
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ TQ G + + +R + A + K ++
Sbjct: 357 VPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSKDATDQAREQQALNVLRNRKYDEE 416
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 417 LQTWLRQIRDEAYVE 431
>gi|294678213|ref|YP_003578828.1| chaperone SurA [Rhodobacter capsulatus SB 1003]
gi|294477033|gb|ADE86421.1| chaperone SurA [Rhodobacter capsulatus SB 1003]
Length = 418
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 96/259 (37%), Gaps = 12/259 (4%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + P+ + + + I T+NG I+ +I++R ++L G++ K+A + LI
Sbjct: 17 LALGTAAPLQAQATGDFAPAI--TVNGLAISGYEIAQRARFMELLGATGDVRKMAEEALI 74
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L+ + + GI+ V + A LSAEDF L G+ ++ ++
Sbjct: 75 DDRLQGWKAQSLGISVSREAVTRGMAEFAARANLSAEDFLKALAGAGVEAQTYRDFVTSG 134
Query: 142 SIWPDVVK-----NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
IW +VVK + ++ + K + LI ++ +
Sbjct: 135 VIWREVVKTTYGGGRIQISDAEIDRALAHEAPKGAEPEPPKVLISEIVIRNFPGRDAETM 194
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
++ A+ ++ +S G+ ++ + L P+ + +L
Sbjct: 195 AKARKAAAAKTEAEFAAL----AKELSSAKSAGQGGRLDWMPVTALPPEVRETVLGLRPG 250
Query: 256 NTTNPYVTQKGVEYIAICD 274
+ P T V +
Sbjct: 251 RASAPVETPNSVSVFFLRG 269
>gi|289676168|ref|ZP_06497058.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae FF5]
gi|330938460|gb|EGH42067.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 440
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 108/294 (36%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D +L +S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR GE ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGEAQMRDEV 291
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 96/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDMGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGEAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRNEAETKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ TQ G + + +R + A + K ++
Sbjct: 355 VPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSKDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|146281122|ref|YP_001171275.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri
A1501]
gi|145569327|gb|ABP78433.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri
A1501]
Length = 451
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 56/325 (17%), Positives = 121/325 (37%), Gaps = 15/325 (4%)
Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
T V T LS+ ++ L +L+ + + R+ ++ +VI +++R+
Sbjct: 14 TVNVKTKLSEVLRPLALGALLLSGATLAPAALAQVQPLDRVVAIVDNDVIMQSQLNQRMR 73
Query: 62 LLK--LQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
++ ++K + L++ ++ LI E L+ Q E+SGI +N A+
Sbjct: 74 EVQQTIEKRGADAPPTDVLQQQVLERLITENLQLQIGERSGIRISDEELNQAMGTIAQRN 133
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMK 171
+S E F L + G+ ++ + + + V + + E+ K
Sbjct: 134 NMSLEQFREALARDGLSLETAREQIRREMVISRVRQRRVAERIQVSNQEVQNFLASDLGK 193
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS- 230
EY + +L ++P+ +R +L+ D +L S +
Sbjct: 194 LQLSEEYHLANILIAVPEGADSATIQAAERTAMDTYQQLQQGADFARLAVSRSGSENALE 253
Query: 231 IGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKA 286
G + + L P F ++ S T P T G + + DKR +
Sbjct: 254 GGDMGWRKAAQLPPPFDTEVRELSVGEVTQPVRTPPGFIMLKLLDKRGGETQVRDEVHVR 313
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSN 311
++ + + + ++ V++LR
Sbjct: 314 HILIKPSAIRSDEEARLLVQRLRDR 338
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 60/156 (38%), Gaps = 9/156 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFA 223
+K+ + E +R +L + + + +R++D R+ +D +L +
Sbjct: 297 LDKRGGETQVRDEVHVRHILIKPSAIRSDEEARLLVQRLRD----RINAGEDFAQLARSF 352
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ + G ++ + L P+F+ ++ + + + + G + + +R
Sbjct: 353 SEDPGSALNGGDLNWIDPASLVPEFREVMANTPSGELSQVFKSPYGWHILEVLGRRATDA 412
Query: 281 EIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 413 SEQFREQQALSLLRNRKYDEELQAWLRQIRDEAYVE 448
>gi|330961060|gb|EGH61320.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 440
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 109/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+K + LI+E L+ Q E++GI +N A+ +S +
Sbjct: 58 IAKRGSGVPPAEALQKQVLDRLILENLQLQMGERAGIRVSDEELNQAIGTIAQRNNMSVD 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ + ++ + + I V + + E E+ + K
Sbjct: 118 QFRAALAHDGLSYDDAREQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D KL S + G
Sbjct: 178 EFHLANILIATPDSASSEAIQAAAIKAKSIYDQLKKGADFGKLATTNSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 55/157 (35%), Gaps = 7/157 (4%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + + E +R +L + K + R+ +D L K
Sbjct: 276 LEKRGGQGQAQMRDEVHVRHILIKPSE---IRSEEATKLLAQKIYDRIENGEDFATLAKS 332
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G ++ + L P+F+ ++ + + P+ T G + + +R
Sbjct: 333 FSEDPGSALNGGDLNWVDPNSLVPEFREVMSNTPQGVLSKPFKTAYGWHVLEVLGRRATD 392
Query: 280 G-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A + + K ++ +++++R A +
Sbjct: 393 ATGQAREQQALSVLRNRKYDEELQTWLRQIRDEAYVE 429
>gi|66047852|ref|YP_237693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae B728a]
gi|63258559|gb|AAY39655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae B728a]
gi|330970840|gb|EGH70906.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. aceris str. M302273PT]
Length = 442
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 109/296 (36%), Gaps = 17/296 (5%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 VKTKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQ 57
Query: 65 LQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
L+ + LI+E L+ Q E+SGI +N A+ +S
Sbjct: 58 QTIAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMS 117
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
E F + L G+ N ++ + + I V + + + E+ K
Sbjct: 118 VEQFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQL 177
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGK 233
E+ + +L + PD+ + +L+ D +L +S + G
Sbjct: 178 SEEFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGD 237
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 MGWRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 293
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 122 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDMGKAQLS-E 179
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 180 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMG 239
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 240 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 299
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ R+ +D +L K S+ + G ++ + L
Sbjct: 300 IKPSEIRNEEE---TKRLAQKIYDRIENGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 356
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ TQ G + + +R + A + K ++
Sbjct: 357 VPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 416
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 417 LQTWLRQIRDEAYVE 431
>gi|330891199|gb|EGH23860.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
mori str. 301020]
Length = 440
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 110/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D +L +S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTQLAATSSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTQLAATSSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 355 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|229592952|ref|YP_002875071.1| putative chaperone [Pseudomonas fluorescens SBW25]
gi|229364818|emb|CAY52844.1| putative chaperone [Pseudomonas fluorescens SBW25]
Length = 444
Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/318 (19%), Positives = 116/318 (36%), Gaps = 19/318 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-- 64
T LSD ++ L VL + ++ + ++ ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPL----VLGALLLGTASAHAAVQQLDKVVAIVDNDVIMQSQLDQRVKEVQQT 58
Query: 65 LQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+ K G L++ ++ LIVE L+ Q ++SGI +N A+ +S +
Sbjct: 59 IAKRGGGVPPTSVLDQQVLERLIVENLQLQIGDRSGIRISDEELNQAVGTIAQRNNMSID 118
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ + + + I V + + E E+ K
Sbjct: 119 QFRAALAHDGLSYEDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSE 178
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQ 235
E + +L PD+ Q A RL+ D ++ + + + G
Sbjct: 179 ELHLANILIPTPDSANSEQLNAAAAKTQAIYDRLKAGADFAQMAIAQSGSDNALEGGDMG 238
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NT 293
+ + L P F + L T P T G + + +KR GGE +LK + +
Sbjct: 239 WRKAAQLPPPFDRELSAMEVGGITQPARTPGGFIILKLLEKR--GGETSLKDEVHVRHIL 296
Query: 294 PTKIEKHEAEYVKKLRSN 311
E K+L
Sbjct: 297 VKPSEIRTEAQTKELAQK 314
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 95/316 (30%), Gaps = 60/316 (18%)
Query: 56 ISK-RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
I + R AL + +E+I+ ++++ + + + V F
Sbjct: 117 IDQFRAALAHDGLSYEDARDQIRREMIISRVRQRRVAER-VQVSEQEVKNFLASDLGKMQ 175
Query: 115 LS-----------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------I 140
LS +E ++ K + K +A
Sbjct: 176 LSEELHLANILIPTPDSANSEQLNAAAAKTQAIYDRLKAGADFAQMAIAQSGSDNALEGG 235
Query: 141 QSIWPDVVK-----NDFMLKYGNLEMEIPA------------NKQKMKNITVREYLIRTV 183
W + + + + PA K+ + E +R +
Sbjct: 236 DMGWRKAAQLPPPFDRELSAMEVGGITQPARTPGGFIILKLLEKRGGETSLKDEVHVRHI 295
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
L + + + Q K + R+ +D L K S+ + G ++
Sbjct: 296 LVKPSEIRTEAQ---TKELAQKIYDRIESGEDFATLAKSFSEDPGSALNGGDLNWIDPKA 352
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEK 299
L P+FQ ++ Q + P+ TQ G + + +R A + K ++
Sbjct: 353 LVPEFQQVMADTPQGVLSKPFKTQYGWHVLEVLGRRATDNTNQAREQQALNVLRNRKYDE 412
Query: 300 HEAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 413 ELQTWLRQIRDEAYVE 428
>gi|257483108|ref|ZP_05637149.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 442
Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 110/296 (37%), Gaps = 17/296 (5%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 VKTKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQ 57
Query: 65 LQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
L+ + LI+E L+ Q E+SGI + +N A+ +S
Sbjct: 58 QTIAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMS 117
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
E F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 VEQFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQL 177
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGK 233
E+ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 SEEFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGD 237
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 MGWRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 293
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 122 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 179
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 180 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 239
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 240 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 299
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 300 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWIDPNSL 356
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 357 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 416
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 417 LQTWLRQIRDEAYVE 431
>gi|312963417|ref|ZP_07777899.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas fluorescens
WH6]
gi|311282223|gb|EFQ60822.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas fluorescens
WH6]
Length = 444
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 61/318 (19%), Positives = 116/318 (36%), Gaps = 19/318 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-- 64
T LSD ++ L VL + ++ + ++ ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPL----VLGALFLGAASAHAAVQQLDKVVAIVDNDVIMQSQLDQRVKEVQQT 58
Query: 65 LQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+ K G L++ ++ LIVE L+ Q E+SGI +N A+ +S +
Sbjct: 59 IAKRGGGVPPTSVLDQQVLERLIVENLQLQIGERSGIRISDEELNQAVGTIAQRNNMSID 118
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ + + + I V + + E E+ K
Sbjct: 119 QFRAALAHDGLSYEDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSE 178
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQ 235
E + +L PD+ Q A RL+ D ++ + + + G
Sbjct: 179 ELHLANILIPTPDSANSEQLNAAAAKTQAIYERLKAGADFAQMAIAQSGSDNALEGGDMG 238
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NT 293
+ + L P F + L T P T G + + ++R GGE +LK + +
Sbjct: 239 WRKAAQLPPPFDRELSAMEVGGITQPARTPGGFIILKLLERR--GGETSLKDEVHVRHIL 296
Query: 294 PTKIEKHEAEYVKKLRSN 311
E K+L
Sbjct: 297 VKPSEIRSEAQTKELAQK 314
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/316 (12%), Positives = 92/316 (29%), Gaps = 60/316 (18%)
Query: 56 ISK-RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
I + R AL + +E+I+ ++++ + + + V F
Sbjct: 117 IDQFRAALAHDGLSYEDARDQIRREMIISRVRQRRVAER-VQVSEQEVKNFLASDLGKMQ 175
Query: 115 LS-----------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------I 140
LS +E ++ K K +A
Sbjct: 176 LSEELHLANILIPTPDSANSEQLNAAAAKTQAIYERLKAGADFAQMAIAQSGSDNALEGG 235
Query: 141 QSIWPDVVK-----NDFMLKYGNLEMEIPA------------NKQKMKNITVREYLIRTV 183
W + + + + PA ++ + E +R +
Sbjct: 236 DMGWRKAAQLPPPFDRELSAMEVGGITQPARTPGGFIILKLLERRGGETSLKDEVHVRHI 295
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
L + K + R++ +D L K S+ + G ++
Sbjct: 296 LVKPSE---IRSEAQTKELAQKIYDRIQSGEDFATLAKSFSEDPGSALNGGDLNWIDPKA 352
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEK 299
L P+FQ ++ Q + P+ TQ G + + +R + + K ++
Sbjct: 353 LVPEFQQVMADTPQGVLSKPFKTQYGWHVLEVLGRRATDNTSQAREQQALSVLRNRKYDE 412
Query: 300 HEAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 413 ELQTWLRQIRDEAYVE 428
>gi|71733994|ref|YP_272934.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554547|gb|AAZ33758.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 440
Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 109/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLESVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI N +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDNELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 355 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|320326011|gb|EFW82069.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
glycinea str. B076]
gi|330985794|gb|EGH83897.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 440
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 109/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 355 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|331011659|gb|EGH91715.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 440
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 109/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWIDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 355 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|28867781|ref|NP_790400.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato str. DC3000]
gi|81732691|sp|Q88A44|SURA_PSESM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|28851016|gb|AAO54095.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 428
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 12/276 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76
++ + + + ++ +VI + +R+ ++ +L+
Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI+E L+ Q E+SGI + +N A+ +S E F + L G+ ++
Sbjct: 64 LDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDARE 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + I V + + E E+ + K E+ + +L + PD+ +
Sbjct: 124 QVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ +L+ D K +S + + G + + L P F ++L
Sbjct: 184 AIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSSM 243
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ T P T G + + +KR G+ ++ +
Sbjct: 244 PIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 279
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 90/315 (28%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 108 RAALAHDGLSYEDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 165
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 166 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 225
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 226 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 285
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ K + R+ +D L K S+ + G ++ + L
Sbjct: 286 IKPSE---IRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSL 342
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F++++ + + P+ T G + + +R A + K ++
Sbjct: 343 VPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYDEE 402
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 403 LQTWLRQIRDEAYVE 417
>gi|329890123|ref|ZP_08268466.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568]
gi|328845424|gb|EGF94988.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568]
Length = 457
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 114/294 (38%), Gaps = 16/294 (5%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKIN---GELEKIAVQELIV 82
+ +S I T+N +IT D+ +R+ A+ ++Q G +++ A+ +LI
Sbjct: 58 TAPAPQFRLSDGIIATVNDRIITGFDLRQRMLVLMAMTQVQPTEENIGAIQQQALNDLID 117
Query: 83 ETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L+ E+ K + ++ AR G + + +FL++ GI F++ + +
Sbjct: 118 QHLQAAELAKFEQLKIGDAEIDQEIADMARQAGTTPASYINFLEQGGISIPAFREQMRTE 177
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
W ++V F + + +I +Q ++ T +YLI + +
Sbjct: 178 IGWRELVGGRFRDRARVGKSQIEQTMRQMTESATKPQYLIGEIYLEAARVGGMQEAMNGA 237
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259
R + ++ +F++ G A ++++ + P Q+++ +N
Sbjct: 238 RQ--LVQQMIQGAPFMAVARQFSAAPSAARGGDAGWVVQGTVQPALQSVMDTLEAGQLSN 295
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSA----QNTPTKIEKHEAEYVKKLR 309
P GV + + DKR +K +N + ++ LR
Sbjct: 296 PIPVDGGVYILYMRDKRSGASTSMVKMKQVMVELPENADEAQVAAATQRLEALR 349
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ K + ++ V+ +P+N + Q + +A LR C+ + A
Sbjct: 309 RDKRSGASTSMVKMKQVMVELPENADEAQVAAATQRLEA----LRGQLTCDNILTRARSE 364
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+ +DL PQFQ + + ++ + + T GV +A+CD+R G +
Sbjct: 365 PGLLGADLGESDVADLLPQFQQVARSAEVGSVSTAVRTPLGVHLLAVCDRRLGGPDAPSA 424
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+ Y++ LR++A+I
Sbjct: 425 QQVEARLQNQNYAMLGRRYLRDLRADALIE 454
>gi|302383690|ref|YP_003819513.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
gi|302194318|gb|ADL01890.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
Length = 450
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 108/267 (40%), Gaps = 18/267 (6%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGEL---EKIAVQE 79
P+ + M+ I T+N +VIT D+ +R+ A+ ++Q + ++ A+Q
Sbjct: 49 TAPLPPQPEFKMADGIVATVNDQVITGFDLRQRMLTTIAMSQVQPTEENIPAIQQQALQG 108
Query: 80 LIVETLKKQEIEKSG-ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI E L+ EI K + V+ + A G + + + FL GI + ++ L
Sbjct: 109 LIEERLQAAEIAKFETLKITDAEVDEEIARMAEEAGTTPQAYVEFLTSGGIRAENLREQL 168
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ W ++V F + ++ +Q + + +YL+ + Q
Sbjct: 169 RTEIGWRELVGGRFNSRSRVSRAQVQQALRQVTETASKPQYLVGEIYLEAARVGGQ---- 224
Query: 198 VQKRIKDAEESRLRLPKDC---NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
Q+ + AE+ ++ + +F++ G A +L++ + P+ Q L+ +
Sbjct: 225 -QQAMNGAEQLVQQMVQGAPFQAVARQFSAAPSAARGGDAGWLVQGTVQPELQAALEALE 283
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGG 280
+ P GV I + DKR
Sbjct: 284 VGQLSRPIPVSGGVYIIYMRDKRSGAA 310
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 58/151 (38%), Gaps = 7/151 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ K ++ + +P+ R++ LR C+ + + S
Sbjct: 303 RDKRSGAATNLVSLKQAMIELPETAPPADVAAATTRLQT-----LRGSLTCDNILQRTSS 357
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ ++L PQFQ + + ++ + ++ T GV +A+C +R G ++
Sbjct: 358 EAGLLGSDLGEADVANLAPQFQQVARSAEIGSVSDVVRTPLGVHLVAVCGRRAGGADVPT 417
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + Y++ LR++A+I
Sbjct: 418 AREIEGRLQNQNLAMLARRYLRDLRADALIE 448
>gi|302185941|ref|ZP_07262614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae 642]
Length = 440
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 108/294 (36%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ +L+ D +L +S + G
Sbjct: 178 EFHLANILIATPDSASSEAIQAAAAKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 97/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDMGKAQLSEE 178
Query: 119 -DFSSFL-----------------DKQGIGDNHFK---QYLA--------------IQSI 143
++ L +GI + K +
Sbjct: 179 FHLANILIATPDSASSEAIQAAAAKAKGI-YDQLKKGADFTRLAATSSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ KR+ R+ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSE---IRNEAETKRLAQKIYDRIENGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ TQ G + + +R + A + K ++
Sbjct: 355 VPEFRQVMSETPQGELSKPFQTQYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|330955092|gb|EGH55352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
Cit 7]
Length = 440
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 110/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S +
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVD 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDLGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + A +L+ D +L +S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAAKAKAIYDQLKKGADFTRLAATSSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 60/157 (38%), Gaps = 7/157 (4%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + + E +R +L + KR+ R++ +D +L K
Sbjct: 276 LEKRGGQGQAQMRDEVHVRHILIKPSE---IRNEAETKRLAQKIYDRIQNGEDFAELAKS 332
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G ++ + L P+F+ ++ ++ + P+ TQ G + + +R
Sbjct: 333 FSEDPGSALNGGDLNWVDPNSLVPEFRQVMSETPQGELSKPFQTQYGWHVLEVLGRRSTD 392
Query: 280 G-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A + K ++ +++++R A +
Sbjct: 393 ATDQAREQQALNVLRNRKYDEELQTWLRQIRDEAYVE 429
>gi|213967673|ref|ZP_03395820.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato T1]
gi|213927449|gb|EEB60997.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato T1]
Length = 428
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 12/276 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76
++ + + + ++ +VI + +R+ ++ +L+
Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMGQRVREVQQTIAKRGSGVPPAADLQPQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI+E L+ Q E+SGI + +N A+ +S E F + L G+ ++
Sbjct: 64 LDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDARE 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + I V + + E E+ + K E+ + +L + PD+ +
Sbjct: 124 QVRREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ +L+ D K +S + + G + + L P F ++L
Sbjct: 184 AIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSSM 243
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ T P T G + + +KR G+ ++ +
Sbjct: 244 PIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 279
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 90/315 (28%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 108 RAALAHDGLSYEDAREQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDQGKAQLS-E 165
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 166 EFHLANILIATPDSASSDAIQAAAVKAKSIYDQLKKGADFAKIAATTSSSENALEGGDMG 225
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 226 WRKAAQLPPPFGDMLSSMPIGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 285
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ K + R+ +D L K S+ + G ++ + L
Sbjct: 286 IKPSE---IRSEEATKLLAQKIYERIENGEDFATLAKSFSEDPGSALNGGDLNWVDPNSL 342
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F++++ + + P+ T G + + +R A + K ++
Sbjct: 343 VPEFRDVMSSTPQGELSKPFKTAYGWHVLEVLGRRATDATGQARDQQALSVLRNRKYDEE 402
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 403 LQTWLRQIRDEAYVE 417
>gi|320332054|gb|EFW87990.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 440
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 109/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
++ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 KFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L + T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 97/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
F S + + L
Sbjct: 178 KFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 355 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|304320041|ref|YP_003853684.1| peptidyl-prolyl cis-trans isomerase family protein [Parvularcula
bermudensis HTCC2503]
gi|303298944|gb|ADM08543.1| peptidyl-prolyl cis-trans isomerase family protein [Parvularcula
bermudensis HTCC2503]
Length = 421
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 105/267 (39%), Gaps = 12/267 (4%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV----- 77
+ + + R+ +N + I+ D+ +RI L+ + + L + A+
Sbjct: 10 TLILTGLTAPLANAQVGERVAAVVNDDPISTFDVRQRIQLIIVTEGMRNLPQEALAQLQG 69
Query: 78 ---QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ELI E LK QE E+ +T ++ Q A G + + + L G+
Sbjct: 70 RALRELIEERLKLQEAERFELTIPDEAIDAELEQLAGQAGTTVQQLTEDLATAGVNIGTL 129
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQ 193
+ + + W +V+ + + + + ++ + +YLI + + + Q
Sbjct: 130 RDRIQAEQAWQQLVRGRYGPRVSITDDAVETMLDDLELSARSDQYLISEICLPVTRQEDQ 189
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252
Q ++ E+ R +P +++++ G +L +L +++++
Sbjct: 190 -PEMYQAGMQMIEQLRRGVPFG-ALAQQYSACSSAARGGDLGWLRADELDQTTLDIVQQL 247
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLG 279
S+ N + P + ++ +A+ R+
Sbjct: 248 SEGNVSRPIPLRGVIKIVALRQTREAA 274
>gi|289627686|ref|ZP_06460640.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649005|ref|ZP_06480348.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330868493|gb|EGH03202.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 440
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 110/294 (37%), Gaps = 17/294 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQT 57
Query: 67 KIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L+ + LI+E L+ Q E+SGI + +N A+ +S E
Sbjct: 58 IAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVE 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 QFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E+ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ + L P F ++L ++ T P T G + + +KR G+ ++ +
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVDDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 291
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 177
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 178 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 237
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 238 WRKAAQLPPPFGDMLSAMPVDDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 297
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 298 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 354
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 355 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 414
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 415 LQTWLRQIRDEAYVE 429
>gi|330812129|ref|YP_004356591.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380237|gb|AEA71587.1| putative peptidylprolyl isomerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 438
Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats.
Identities = 52/320 (16%), Positives = 113/320 (35%), Gaps = 20/320 (6%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL- 65
T LSD ++ L + + + + ++ ++ +V+ + +R+ ++
Sbjct: 3 TKLSDCLRPLMLGAL-----FLGTAANAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQQT 57
Query: 66 -------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
Q G L++ ++ LIVE L+ Q E+SGI +N A+ +S +
Sbjct: 58 IAKRGGGQPPPGVLDQQVLERLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNNMSID 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVR 176
F + L + G+ + + + + V + + E E+ K
Sbjct: 118 QFRAALARDGLSYEDARDQIRREMVISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQ 235
E + +L P++ R +L+ D ++ S + G
Sbjct: 178 ELHLANILIPTPESANSEAIQSAYRQAMDVYQQLKQGADFGQMAIAKSGSDNALEGGDMG 237
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQ 291
+ + L P F + L + + T P T G + + +KR G + ++ +
Sbjct: 238 WRKPAQLPPPFDRELSAMAVGDITQPARTPGGFIILKVLEKRGGGTQVRDEVHVRHILIK 297
Query: 292 NTPTKIEKHEAEYVKKLRSN 311
+ + E +KL
Sbjct: 298 PSEIRSEAETKRLAEKLYDR 317
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 89/289 (30%), Gaps = 38/289 (13%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT----FDSNTVNYFFVQHARNTG 114
R+ ++ + E+ L + K Q E+ + + N +Q A
Sbjct: 145 RVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESANSEAIQSAYRQA 204
Query: 115 LSAED-------FSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNLEME 162
+ F + DN + W + + + ++
Sbjct: 205 MDVYQQLKQGADFGQMAIAKSGSDNALEG---GDMGWRKPAQLPPPFDRELSAMAVGDIT 261
Query: 163 IPA------------NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
PA K+ E +R +L + KR+ + R+
Sbjct: 262 QPARTPGGFIILKVLEKRGGGTQVRDEVHVRHILIKPSE---IRSEAETKRLAEKLYDRI 318
Query: 211 RLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
+D +L K S+ + G ++ + L P+F+ ++ Q + P+ + G
Sbjct: 319 EAGEDFAELAKSFSEDPGSALNGGDLNWVDPNALVPEFRQVMADTPQGQLSKPFKSPYGW 378
Query: 268 EYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +R + + K ++ +++++R A +
Sbjct: 379 HVLEVLGRRATDSTTQAREQQAMTVLRNRKYDEELQTWLRQIRDEAYVE 427
>gi|257092441|ref|YP_003166082.1| SurA domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044965|gb|ACV34153.1| SurA domain protein [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 436
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 12/274 (4%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGEL 72
LL + V ++ RI +N EVIT ++ R+ AL +LQ+ +L
Sbjct: 9 LLMSCLVGVVLAQTASRPLAQPIPVDRIVAVVNDEVITLHELRTRLDGALAQLQRQGTQL 68
Query: 73 ------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
E+ ++ L+++ ++ Q+ G+ D + + A +S F + L+K
Sbjct: 69 PPRDVLERQMLERLVIDKVQLQQARDMGVRVDDAQLEQALQRIAAGNKMSLAQFRAALEK 128
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVL 184
GI F++ + + V + + K E EI + V E+ + +L
Sbjct: 129 DGIAFASFREEIRGEMTIARVREREVESKIFISEGEIDNYLAGASGQGGAVEEFNLAHIL 188
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLH 243
P++ Q + + R+R ++ +L S D G + L
Sbjct: 189 LRSPESASPEQIQKLRAKGEQVAERVRKGEEFAQLAAAYSDAPDGLKGGDLGWRSLDRLP 248
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
P F + + + G I + KR
Sbjct: 249 PLFAEAAATLKVGEVSPLLRSSNGFHLIKLVAKR 282
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 75/231 (32%), Gaps = 30/231 (12%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV------------------V 148
Q A E+F+ + K W + V
Sbjct: 208 EQVAERVR-KGEEFAQLAAAYSDAPDGLKG---GDLGWRSLDRLPPLFAEAAATLKVGEV 263
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
G +++ A + V++ R +L + + +++ + +
Sbjct: 264 SPLLRSSNGFHLIKLVAKRGGGTLAAVQQTHARHILIKVNEVVSESEA---RHKLEGLRE 320
Query: 209 RLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266
R++ + +L K S+ + G ++ D P+F+ + + + P + G
Sbjct: 321 RIKHGESFAELAKLFSQDGSATKGGDLGWVYPGDTVPEFERAMNLLAPGEVSEPVQSPFG 380
Query: 267 VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + ++R D+ + +A K ++ +++++ R A +
Sbjct: 381 FHLIEVLERRVQDVSSDR-QRAGARQVLRERKRDEAYQDWLRQTRDRAYVE 430
>gi|197105171|ref|YP_002130548.1| peptidyl-prolyl cis-trans isomerase family protein
[Phenylobacterium zucineum HLK1]
gi|196478591|gb|ACG78119.1| peptidyl-prolyl cis-trans isomerase family protein
[Phenylobacterium zucineum HLK1]
Length = 468
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 119/291 (40%), Gaps = 18/291 (6%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEK---IAVQELIVETLKKQE 89
+S + +N E+I+ D+++R+ LL +Q L + A+ L+ E L+ QE
Sbjct: 74 GISESVAAVVNDEIISTYDLAQRMRLLIATSGVQPTEQTLPQFQREALVSLVDERLQFQE 133
Query: 90 IEKS------GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ + I V+ AR ++ E F SFL +GIG + +Q + Q
Sbjct: 134 LRRVEREQKIDIVATDEEVDEEIADMARQNNMTREQFLSFLGARGIGVDTLRQQIRAQVS 193
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRI 202
W ++ + + + +I A + +++ +Y I VL I +++ +
Sbjct: 194 WARWIRGRYGSRLRIGDDQIAATQARLEAAAAKPQYQISEVL--IDASRVGGMQQAMQGA 251
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261
+ + +F++ + G A ++ + ++ + + +L++ + P
Sbjct: 252 QQLVAQMQQGAPFPAVARQFSALPTAAAGGDAGWISQGEMPTEVEQVLEQMRPGQLSQPI 311
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE-YVKKLRSN 311
+ GV + + DKR GG + +A ++ EA ++ LR
Sbjct: 312 PVRDGVYIVYLRDKRAGGGATLVNLKQAAVPLAQGADEAEARAKLEALRPK 362
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 7/150 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ K ++ + + + E R ++ C LE+ A+ +
Sbjct: 323 RDKRAGGGATLVNLKQAAVPLAQGADEAEA-----RAKLEALRPKI-TSCETLEQAAAGV 376
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
V G +DL P F+ + Q + P T G+ +A+C +R G +
Sbjct: 377 EGVVAGDLGEAEVADLAPAFRQAAETLQIGQVSEPIRTNAGLHLVAVCGRRAAGEAQVDR 436
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + ++ Y++ LR++A I
Sbjct: 437 EQIENRLYGQQLSMIARRYMRDLRNSATIE 466
>gi|288958015|ref|YP_003448356.1| peptidyl-prolyl cis-trans isomerase [Azospirillum sp. B510]
gi|288910323|dbj|BAI71812.1| peptidyl-prolyl cis-trans isomerase [Azospirillum sp. B510]
Length = 485
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 11/251 (4%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIE 91
S I +N EV++ D++ RI + L L ++ LI E L+ QE +
Sbjct: 53 SEGIAAVVNDEVVSVSDVNARIRMALLNAGGAANPETIQRLTPQVMRLLIDERLQMQEAK 112
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ G+T ++ ++ + A ++ + L +Q + + K + W V++
Sbjct: 113 RQGVTVSASEIDDAIKRIAEQNRMNNQQLQEMLKRQNVPVSTLKDQIRALLAWQKVMQRR 172
Query: 152 FMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ E E+ A +++K NI EYL+ + ++ D+ Q+ + + EE +
Sbjct: 173 IRQEVVVGEDEVDAAMERLKANIGKPEYLVAEIFLAV-DSPDQDDEVRRNAERLVEEVK- 230
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269
R +F+ S G ++ +L P+ L + P T G
Sbjct: 231 RGGNFAALARQFSQSAGAASGGDLGWVRSGELSPEVDKALSGMRGGQLSAPVRTATGYHI 290
Query: 270 IAICDKRDLGG 280
+ + +R G
Sbjct: 291 LLVRGQRPFGS 301
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 55/161 (34%), Gaps = 30/161 (18%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
++ ++ I +++ ++ + AE+ R + K C + A + G +
Sbjct: 329 VNMKQIILPI-----ESKEQAKEVKEQAEKLR-KSIKSCGDFQARAKETGMPESGDMGTM 382
Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG----------------- 279
D+ P QNL L + ++ + +C KRD+
Sbjct: 383 RVKDMAPGLQNLALGIPLGQASPVLMSPAAAVILIVC-KRDVPMIQPPPEAQPAPPPPAP 441
Query: 280 -----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + + + + E Y++ LR +A +
Sbjct: 442 TPIQEAKLPGRDEIERELVNERSELLSRRYLRDLRRSAFVE 482
>gi|121956444|sp|Q4ZMG7|SURA_PSEU2 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 428
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 99/276 (35%), Gaps = 12/276 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76
++ + + + ++ +VI + +R+ ++ L+
Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI+E L+ Q E+SGI +N A+ +S E F + L G+ N ++
Sbjct: 64 LDRLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDARE 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + I V + + + E+ K E+ + +L + PD+ +
Sbjct: 124 QVRREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEEFHLANILIATPDSASSD 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS 253
+L+ D +L +S + G + + L P F ++L
Sbjct: 184 AIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMGWRKAAQLPPPFGDMLSSM 243
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ T P T G + + +KR G+ ++ +
Sbjct: 244 PVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 279
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 108 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDMGKAQLS-E 165
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 166 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATSSSSENALEGGDMG 225
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 226 WRKAAQLPPPFGDMLSSMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 285
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ R+ +D +L K S+ + G ++ + L
Sbjct: 286 IKPSEIRNEEE---TKRLAQKIYDRIENGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 342
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ TQ G + + +R + A + K ++
Sbjct: 343 VPEFRQVMSETPQGVLSKPFQTQYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 402
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 403 LQTWLRQIRDEAYVE 417
>gi|83591773|ref|YP_425525.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum
rubrum ATCC 11170]
gi|83574687|gb|ABC21238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum
rubrum ATCC 11170]
Length = 444
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 56/314 (17%), Positives = 120/314 (38%), Gaps = 12/314 (3%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ- 66
+L + + +V ++ C P+ + ++ + RI +N + ++ D++ RI ++
Sbjct: 26 ALGRLLGIALLAWVAVLGCGWPVHTAQAAVPTQRIAAVVNEDAVSLYDLNARIDIVMATG 85
Query: 67 ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
++ L ++ LI ETLK QE +++ +T + +N + R L
Sbjct: 86 GMPNSPEVRQRLAPQILRALIDETLKIQEAKRANVTVSTEDINGGIERLERQNKLPPGGL 145
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYL 179
G+ + + W V++ + E EI +Q ++ N+ EYL
Sbjct: 146 EKAFKAAGLDQQSLIHQIRAELGWIKAVQSTLGPRVNVSEDEISLYQQNLQRNLGKPEYL 205
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ + + DN Q+ + + E+ RL ++F+ G ++
Sbjct: 206 VADIFLPV-DNAAQDAEVLTAAQRMIEQMRL-GANFAALAQQFSRGPAAQRGGDLGWVGP 263
Query: 240 SDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
++ Q L + N + P T G + + D+R G + +S P +
Sbjct: 264 GEIDAEVLQALGAMAPGNLSQPIRTFGGYHILLLRDQRIASGGASSLLKMSRIVIPLRGP 323
Query: 299 KH-EAEYVKKLRSN 311
+ E + LR
Sbjct: 324 RMPTPERLADLRQR 337
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 53/152 (34%), Gaps = 9/152 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+++ + ++ + ++ R+ D + R+ + C + A
Sbjct: 298 RDQRIASGGASSLLKMSRIVIPLRGPRMPTPE----RLADLRQ-RIAATRSCEAFDALAG 352
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
++ S G + + L + QN++ + P + ICD+ G +
Sbjct: 353 EVGPPS-GSMGSIDPARLPAEAQNVIRDLPAGQPSTPLTMDNAEIRLMICDR--PTGGLP 409
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ L + K++ ++ LR AII
Sbjct: 410 GRDILRERLIEQKLQNLAQRRLRDLRQQAIID 441
>gi|167031450|ref|YP_001666681.1| SurA domain-containing protein [Pseudomonas putida GB-1]
gi|166857938|gb|ABY96345.1| SurA domain [Pseudomonas putida GB-1]
Length = 441
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72
VL+ ++ + + R+ ++ +V+ + +R+ ++ G L
Sbjct: 14 VLLGAALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTGAL 73
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L G+ +
Sbjct: 74 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALAHDGLSFD 133
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I V + + E E+ N K EY + +L P+
Sbjct: 134 DAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLNSDMGKMQMSEEYRLANILIPTPEA 193
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ R +LR D ++ S + G+ + L P F +
Sbjct: 194 ANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKM 253
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L T P G + + +KR
Sbjct: 254 LSSMPVGEITQPIRIPNGFIILKLEEKR 281
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 98/301 (32%), Gaps = 60/301 (19%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-------------- 116
+ + +E+I+ ++++ + + I V F +S
Sbjct: 134 DAREQVKREMIISRVRQRRVAER-IQVSEQEVKNFLNSDMGKMQMSEEYRLANILIPTPE 192
Query: 117 ---AEDFSSFLDKQGIGDNHFKQ-----YLA------------IQSIWPDV--------- 147
++D K G +Q +A + W
Sbjct: 193 AANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAK 252
Query: 148 ---------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + G + +++ + +N+ E +R +L +
Sbjct: 253 MLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSE---IRSEAA 309
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-N 255
+++ + R++ +D +L K S+ + G ++ + L P+F+ + +Q
Sbjct: 310 TEQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQG 369
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P+ TQ G + + +R E A + + K ++ +++++R A +
Sbjct: 370 VVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQTWLRQIRDEAYV 429
Query: 315 H 315
Sbjct: 430 E 430
>gi|254294289|ref|YP_003060312.1| SurA domain protein [Hirschia baltica ATCC 49814]
gi|254042820|gb|ACT59615.1| SurA domain protein [Hirschia baltica ATCC 49814]
Length = 426
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 105/279 (37%), Gaps = 11/279 (3%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIAL----LKLQKINGELEKI---AVQELIVETL 85
+N + I+ D+ +R L +Q + + A++ LI E L
Sbjct: 36 VPQIEAVEGTVAIVNDQPISYSDVRQRAQFILVSLGVQPNAETIRQAQTRAIEGLIDEKL 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ QE E + + ++ A + + EDF L + G+ + + W
Sbjct: 96 QLQEAETYELVVEEAEIDDSIANIAARSNATPEDFLQGLAQVGLSPRTLRDQIRADIAWR 155
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+V F + ++I N +++ K++ +Y I + F + + Q +
Sbjct: 156 RLVGGRFGSRVRISSLQIDDNLERLNKSMEEPQYRIAEI-FLPGITQEEISVVYQGAEEL 214
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263
+ + +F++ + G+ +L ES L ++ + ++ S+ T+P VT
Sbjct: 215 KRQIENQAAPFEAVARQFSAAPTASAGGEIGWLGESQLKKEYADQVRALSKPGLTDPIVT 274
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
GV +++ +K E AL + Q T +
Sbjct: 275 DNGVYLVSLMNK-QAPVEEALVGFKLKQIYATGADAVSK 312
>gi|122070657|sp|Q48NT5|SURA_PSE14 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 428
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 100/276 (36%), Gaps = 12/276 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76
++ + + + ++ +VI + +R+ ++ L+
Sbjct: 4 ALLLSGAVHAAVQPLESVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI+E L+ Q E+SGI N +N A+ +S E F + L G+ N ++
Sbjct: 64 LDRLILENLQLQMGERSGIRVSDNELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDARE 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + I V + + + E+ + K E+ + +L + PD+ +
Sbjct: 124 QVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS 253
+L+ D +L S + G + + L P F ++L
Sbjct: 184 AIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSAM 243
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ T P T G + + +KR G+ ++ +
Sbjct: 244 PVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 279
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 108 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 165
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 166 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 225
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 226 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 285
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 286 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 342
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 343 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 402
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 403 LQTWLRQIRDEAYVE 417
>gi|298485302|ref|ZP_07003394.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160152|gb|EFI01181.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 428
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 100/276 (36%), Gaps = 12/276 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIA 76
++ + + + ++ +VI + +R+ ++ L+
Sbjct: 4 ALLLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI+E L+ Q E+SGI + +N A+ +S E F + L G+ N ++
Sbjct: 64 LDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDARE 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + I V + + + E+ + K E+ + +L + PD+ +
Sbjct: 124 QVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEEFHLANILIATPDSASSD 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS 253
+L+ D +L S + G + + L P F ++L
Sbjct: 184 AIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMGWRKAAQLPPPFGDMLSAM 243
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ T P T G + + +KR G+ ++ +
Sbjct: 244 PVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEV 279
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 98/315 (31%), Gaps = 63/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 108 RAALAHDGLSYNDAREQVRREMIISRVRQRRVAER-IQVSQQEVKNFLASDQGKAQLS-E 165
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLA---------------------IQSI 143
+F S + + L
Sbjct: 166 EFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGDMG 225
Query: 144 WPDVVK-----NDFMLKYGNLEMEIPAN--------------KQKMKNITVREYLIRTVL 184
W + D + ++ PA + + E +R +L
Sbjct: 226 WRKAAQLPPPFGDMLSAMPVGDVTPPARTPGGFIILKLLEKRGGQGQAQMRDEVHVRHIL 285
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + + KR+ + R++ +D +L K S+ + G ++ + L
Sbjct: 286 IKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKSFSEDPGSALNGGDLNWVDPNSL 342
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKH 300
P+F+ ++ ++ + P+ T G + + +R + A + K ++
Sbjct: 343 VPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTDATDQAREQQALNVLRNRKYDEE 402
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 403 LQTWLRQIRDEAYVE 417
>gi|70732935|ref|YP_262706.1| survival protein SurA [Pseudomonas fluorescens Pf-5]
gi|68347234|gb|AAY94840.1| survival protein SurA [Pseudomonas fluorescens Pf-5]
Length = 440
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 57/322 (17%), Positives = 116/322 (36%), Gaps = 20/322 (6%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V T LSD ++ L + + + + ++ ++ +V+ + +R+ ++
Sbjct: 3 VKTKLSDCLRPLMLGAL-----FLSTAASAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQ 57
Query: 65 --LQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+ K G LE+ ++ LIVE L+ Q E+SGI +N A+ +S
Sbjct: 58 QTIAKRGGGVPPTSVLEQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNSMS 117
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
E F + L G+ + + + I V + + E E+ K
Sbjct: 118 IEQFRAALAHDGLSYEDARDQVRREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQL 177
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGK 233
E + +L P++ R +L+ D +L + + + G
Sbjct: 178 SEELHLANILIPTPESANSEAIQSAARQAMEVYQQLKQGADFAQLAIARSGSDNALEGGD 237
Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLS 289
+ + L P F + L + + T P T G + + DKR G + ++
Sbjct: 238 MGWRKAAQLPPPFDRELSAMAVGDITQPARTPGGFIILKLLDKRGGGNQVRDEVHVRHIL 297
Query: 290 AQNTPTKIEKHEAEYVKKLRSN 311
+ + + E+ +KL
Sbjct: 298 IKPSEIRSEEETKRLAQKLYDR 319
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 99/316 (31%), Gaps = 60/316 (18%)
Query: 56 ISK-RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
I + R AL + +E+I+ ++++ + + I V F
Sbjct: 118 IEQFRAALAHDGLSYEDARDQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDLGKMQ 176
Query: 115 LSAE-DFSSFL----------------DKQGIGDNHFKQ-----YLA------------I 140
LS E ++ L + KQ LA
Sbjct: 177 LSEELHLANILIPTPESANSEAIQSAARQAMEVYQQLKQGADFAQLAIARSGSDNALEGG 236
Query: 141 QSIWPDVVK-----NDFMLKYGNLEMEIPAN------------KQKMKNITVREYLIRTV 183
W + + + ++ PA K+ N E +R +
Sbjct: 237 DMGWRKAAQLPPPFDRELSAMAVGDITQPARTPGGFIILKLLDKRGGGNQVRDEVHVRHI 296
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
L + + + + KR+ R+ +D +L K S+ + G ++ +
Sbjct: 297 LIKPSEIRSEEE---TKRLAQKLYDRIEAGEDFAELAKSYSEDPGSALNGGDLNWIDPNA 353
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEK 299
L P+F+ ++ K+ + P+ + G + + +R + + K ++
Sbjct: 354 LVPEFREVMAKTPQGQLSKPFKSPYGWHVLEVLGRRATDSTSQAREQQAMTVLRNRKYDE 413
Query: 300 HEAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 414 ELQTWLRQIRDEAYVE 429
>gi|253995959|ref|YP_003048023.1| SurA domain-containing protein [Methylotenera mobilis JLW8]
gi|253982638|gb|ACT47496.1| SurA domain protein [Methylotenera mobilis JLW8]
Length = 434
Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 107/310 (34%), Gaps = 16/310 (5%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-------- 69
+ F+ + F + ++ RI ++ VIT+ ++ RI L Q
Sbjct: 9 SLFIALSFSQLNCLAAADVTKMDRIVAIVDQSVITEQELESRIVSLSAQLKKQGTELPEA 68
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L K ++ LI + L+ Q ++GI D ++ + A ++ +F L++ GI
Sbjct: 69 SILRKQILERLISDALQLQYAAQTGIKVDDMQLDKTIERIAEQNKMTVREFYDALNQDGI 128
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSI 187
F+ + + + + + + E EI Q N EY I +L +
Sbjct: 129 SVRKFRSDIRNEITIARLREREVESRVNVSESEIDNYLTTQASTNQNQDEYEISHILIRV 188
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P++ K D + L K+ S + G + + + F
Sbjct: 189 PEDAATEDVQKAKTKVDEIFAALASGTSFAKVSASFSDAPNALEGGNIGWKQGAQMPALF 248
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHE 301
+ LK Q + + G + + DKR E ++ + + EK
Sbjct: 249 LDALKAMQKGEVSAALRSPNGFHILKLTDKRGGSSPLIIEQTHARHILIKLSEVMSEKDA 308
Query: 302 AEYVKKLRSN 311
+ ++
Sbjct: 309 KTKMDGIKER 318
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 92/298 (30%), Gaps = 41/298 (13%)
Query: 54 GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG----------ITFDSNT-- 101
DI I + +L++ E + I L Q I +
Sbjct: 135 SDIRNEITIARLREREVESRVNVSESEIDNYLTTQASTNQNQDEYEISHILIRVPEDAAT 194
Query: 102 ---------VNYFFVQHARNTGL-----SAEDFSSFLDKQGIG-------DNHFKQYLAI 140
V+ F A T S D + L+ IG F L
Sbjct: 195 EDVQKAKTKVDEIFAALASGTSFAKVSASFSDAPNALEGGNIGWKQGAQMPALFLDALKA 254
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ V G +++ + + + + R +L + + + K
Sbjct: 255 --MQKGEVSAALRSPNGFHILKLTDKRGGSSPLIIEQTHARHILIKLSEVMSEKDA---K 309
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTT 258
D + RL + L + S+ S G ++ D PQF+ + N +
Sbjct: 310 TKMDGIKERLDNGEKFEVLARQFSEDGTASNGGDLGWVNPGDTVPQFEKAMNSLQPNEIS 369
Query: 259 NPYVTQKGVEYIAICD-KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P ++ G I + + K+ + A + + K ++ +++++LR A +
Sbjct: 370 APVLSPFGWHVIQVLERKKQDMSKEAARLKARQEIRARKADEAYQDWIRELRDRAFVE 427
>gi|114328860|ref|YP_746017.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
gi|114317034|gb|ABI63094.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
Length = 468
Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 13/262 (4%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQ-------KINGELEKIAVQELIVETLKKQEIE 91
+ I +NG+VI+ GD+ R L + ++ L +++L+ E L+ QEI+
Sbjct: 69 ETSIVAVVNGDVISKGDVDARRRLFAMSTGLPMSKEVLDRLTPQVLRQLVDEKLRLQEIQ 128
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ GI + + + + G+ + L G+ + +Q W V++
Sbjct: 129 RRGIVITDSDIAHSIQGMEQRNGMQPDALRHKLAADGVSMRTLIDQIRVQLGWTRVLRQQ 188
Query: 152 FMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + EI ++ + + EY + + + D ++ D +L
Sbjct: 189 LGERVRISDKEIQDEEELLASQKGQTEYRVSEIFIPVDD---PSRAQAAHDFADTVIQQL 245
Query: 211 RLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268
R +F+ + G ++ + L PQ ++LK+ +NP G+E
Sbjct: 246 RSGAPFPVVAAQFSQSQTALEGGDLGWVQPNQLDPQVVSVLKEMPPGAISNPIDVAGGIE 305
Query: 269 YIAICDKRDLGGEIALKAYLSA 290
+A+ KR +G + +
Sbjct: 306 IVALRGKRIIGNDQGTALSIRQ 327
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/336 (15%), Positives = 101/336 (30%), Gaps = 71/336 (21%)
Query: 48 GEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVET---------LKKQEI 90
G VITD DI+ I ++ + + + ++++ LI + L++Q
Sbjct: 131 GIVITDSDIAHSIQGMEQRNGMQPDALRHKLAADGVSMRTLIDQIRVQLGWTRVLRQQLG 190
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL---------DKQGIGDNHFKQYLAIQ 141
E+ + + A G + S + Q L
Sbjct: 191 ER--VRISDKEIQDEEELLASQKGQTEYRVSEIFIPVDDPSRAQAAHDFADTVIQQLRSG 248
Query: 142 SIWPDVVKNDFMLK---------------------------------------YGNLEME 162
+ +P VV F G +E+
Sbjct: 249 APFP-VVAAQFSQSQTALEGGDLGWVQPNQLDPQVVSVLKEMPPGAISNPIDVAGGIEIV 307
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK-DAEESRLRLPKDCNKLEK 221
K+ + N IR V + Q+R + ++ DC +E
Sbjct: 308 ALRGKRIIGNDQGTALSIRQVFYPFTTPLNPAAPTDQQRKTLEHAKAAAAAMHDCAAVEA 367
Query: 222 FASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
+ + L + PQF+ LL + P V+Q G+ + +C +
Sbjct: 368 ASKAMGGSRPSDPGELRLESINPPQFRALLASLPVGQPSQPIVSQDGIAIMMVCSRTQKN 427
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K +S Q ++E + ++LR A+I
Sbjct: 428 FGLPGKEDISNQILGERVETASRQLQRELRRRALID 463
>gi|62178657|ref|YP_215074.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|75505914|sp|Q57TG8|SURA_SALCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|62126290|gb|AAX63993.1| peptidyl-prolyl cis-trans isomerase, survival protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
Length = 428
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAIVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E +R +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLRHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R ++ R D KL S G+ + +L F
Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++E + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDASTELNLRHILIALPENPTSEQVNDAQRQAESIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + ++I+V E R +L + + N + ++++
Sbjct: 267 ILKVNDLRGQSQSISVTEVHARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ A + + + K + A ++++ R++A
Sbjct: 385 KVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|325276043|ref|ZP_08141858.1| SurA domain-containing protein [Pseudomonas sp. TJI-51]
gi|324098828|gb|EGB96859.1| SurA domain-containing protein [Pseudomonas sp. TJI-51]
Length = 428
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72
+L+ ++ + + R+ ++ +V+ + +R+ ++ G L
Sbjct: 1 MLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGSVPPAGAL 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L G+ +
Sbjct: 61 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALAHDGLSFD 120
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
+ + + I V + + E E+ N K EY + +L P+
Sbjct: 121 DARDQVKREMIISRVRQRRVAERIQVSEQEVKNFLNSDMGKMQMSEEYRLANILIPTPEA 180
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
R +L+ D +L ++ + + G+ + + L P F +
Sbjct: 181 ANSADIQKAARQVGEVYQQLKQGADFGQLAIARSASENALEGGEMGWRKAAQLPPDFAKM 240
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L T P G + + +KR
Sbjct: 241 LSSMPVGEITQPIRIPNGFIILKLEEKR 268
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 33/290 (11%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT----FDSNTVNYF-FVQHA 110
I R+ ++ + E+ L + K Q E+ + N + A
Sbjct: 131 IISRVRQRRVAERIQVSEQEVKNFLNSDMGKMQMSEEYRLANILIPTPEAANSADIQKAA 190
Query: 111 RNTGLSAEDFSSF--LDKQGIGDNHFKQYLAI-QSIWPDVVK-----NDFMLKYGNLE-- 160
R G + + I + + L + W + + E
Sbjct: 191 RQVGEVYQQLKQGADFGQLAIARSASENALEGGEMGWRKAAQLPPDFAKMLSSMPVGEIT 250
Query: 161 -----------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+++ + +N+ E +R +L + +++ + R
Sbjct: 251 QPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIKPSE---IRSDAATEQLAERLYER 307
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266
++ +D +L K S+ + G ++ + L P+F+ + +Q T P+ TQ G
Sbjct: 308 IKNGEDFAELAKSYSEDPGSALNGGDLNWVDPNSLVPEFREQMANAQQGVVTKPFKTQYG 367
Query: 267 VEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +R E A + K ++ +++++R A +
Sbjct: 368 WHVLEVLGRRATDSTEQAREQQALNVLRNRKYDEELQTWLRQIRDEAYVE 417
>gi|154253778|ref|YP_001414602.1| SurA domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154157728|gb|ABS64945.1| SurA domain [Parvibaculum lavamentivorans DS-1]
Length = 443
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 108/285 (37%), Gaps = 14/285 (4%)
Query: 17 TTYFVLIIFCIVP---IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------- 66
T + L + P ++ + + + I +N +I+ D+ +R+ L+ L
Sbjct: 25 TAFIFLAGLAVTPADMPLAQNAPSNTQGIAAVVNDRIISSYDLDQRVKLVMLSSGIPDTP 84
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ + ++ L+ E L++QE + I ++ + A+ +S + +FL
Sbjct: 85 ENISRIRGQVLRSLVDEYLQQQEAARLNIEVQQEEIDSALQRIAQRANMSVDQIEAFLKD 144
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLF 185
G+ + + W V++ F ++EI ++++ + YL+ +L
Sbjct: 145 GGVSRAALEAQIRSDIAWNRVIQQQFGPSVTVGDVEIDEVLRRLEEESDQPRYLVSEILI 204
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ D+ + + E+ R P + +F+ + G+ ++ S L
Sbjct: 205 TF-DSPQHAEEIAGGAQRLVEQIRQGAPFE-AVAHQFSQSASAANGGEIGWVHASQLPEG 262
Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+++ K ++P T G + + + G ++ S
Sbjct: 263 VGSVVAKMQPGMVSDPIRTLNGFYIMQLKAMQTGSGADPMRDQYS 307
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 4/136 (2%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ +Y + VL P V +R ++AEE R R C+ +
Sbjct: 292 AMQTGSGADPMRDQYSLMQVLL--PLTPDAEPQAVSRRAREAEEFR-RQTNSCDDAARNI 348
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+K + + ++ L P+ + L NTT P +++G+E + +C + GE
Sbjct: 349 TKYLSGAASPKRDVIAGQLDPRLRQALSGLKAGNTTAPIRSERGIEMVVVCGHKAAEGER 408
Query: 283 ALKAYLSAQNTPTKIE 298
+ + + ++
Sbjct: 409 PTREQIDSSLYEQQLS 424
>gi|26987145|ref|NP_742570.1| survival protein SurA [Pseudomonas putida KT2440]
gi|24981777|gb|AAN66034.1|AE016232_7 survival protein SurA [Pseudomonas putida KT2440]
Length = 439
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKING------EL 72
VL+ ++ + + R+ ++ +V+ + +R+ ++ + K G L
Sbjct: 12 VLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSAL 71
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+ +
Sbjct: 72 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFD 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I V + + E E+ K EY + +L P+
Sbjct: 132 DAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ R +LR D ++ S + G+ + L P F +
Sbjct: 192 ANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L T P G + + +KR
Sbjct: 252 LSSMPVGEITQPIRIPNGFIILKLEEKR 279
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 60/313 (19%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116
R AL + + + +E+I+ ++++ + + I V F +S
Sbjct: 120 RAALARDGLSFDDAREQVKREMIISRVRQRRVAER-IQVSEQEVKNFLASDLGKMQMSEE 178
Query: 117 ---------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------IQSIW 144
++D K G +Q +A + W
Sbjct: 179 YRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGW 238
Query: 145 PDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + G + +++ + +N+ E +R +L
Sbjct: 239 RKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIK 298
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ +++ + R++ +D +L K S+ + G ++ + L P
Sbjct: 299 PSE---IRSEAATEQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVP 355
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEA 302
+F+ + +Q T P+ TQ G + + +R E A + + K ++
Sbjct: 356 EFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQ 415
Query: 303 EYVKKLRSNAIIH 315
+++++R A +
Sbjct: 416 TWLRQIRDEAYVE 428
>gi|90020386|ref|YP_526213.1| L-ribulokinase [Saccharophagus degradans 2-40]
gi|121956457|sp|Q21MS8|SURA_SACD2 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|89949986|gb|ABD80001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus
degradans 2-40]
Length = 430
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 106/315 (33%), Gaps = 15/315 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
IK F I F + R+ ++ IT ++ R+ ++++
Sbjct: 3 IIKTTIATFTAIAFTGAASFTSAEVVPLDRVVAVVDNRAITQTELDSRVQDVQVRSQAAG 62
Query: 72 LE--------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ K + +LI ETL+ + ++ G+ VN +N ++ + F
Sbjct: 63 MRLPEADILNKQIIDQLISETLQLEMADRYGVQVSDQEVNASIGNIIQNAQMTEQQFVQQ 122
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIR 181
L +G+ N F+ + Q + + + E E+ + +Y +
Sbjct: 123 LASEGVSINEFRASIRRQLTMRSITEGLVSRRIRISEQEVDNFLKSADAQFWVSPDYHLG 182
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLES 240
+L ++P + + +A +L+ + + ++ + G + +
Sbjct: 183 HILVALPSSPSSEAIVEAEEKANALYEKLKAGANFAEVAIAESNGPSALQGGDLGWRKSA 242
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKAYLSAQNTPTK 296
+L F LL + + T P +Q G I + + ++ + +
Sbjct: 243 ELPTLFAELLPSLNNGDVTKPTRSQAGFHIIKLYESRGGQKQIVNQTRARHILVKTSEIL 302
Query: 297 IEKHEAEYVKKLRSN 311
+ +K +R
Sbjct: 303 NDAKAEAKLKDIRQQ 317
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 60/154 (38%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + V + R +L + +++ N + ++KD + L D +L K S+
Sbjct: 277 ESRGGQKQIVNQTRARHIL--VKTSEILNDAKAEAKLKDIRQQILD-GADFAELAKTHSE 333
Query: 226 IHDV--SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG-GE 281
S G + P F+ + + + + P+ ++ G + + ++R+ +
Sbjct: 334 DIGSRMSGGDLGWATPGTFVPAFEKTMAETKEGEISQPFKSRFGWHIMKVEERREEDMTQ 393
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
AL+ + E ++++LR A I
Sbjct: 394 EALRQKARNMIMSRRFEDETQIWLQELRDEAFID 427
>gi|148545689|ref|YP_001265791.1| SurA domain-containing protein [Pseudomonas putida F1]
gi|148509747|gb|ABQ76607.1| SurA N-terminal domain [Pseudomonas putida F1]
Length = 439
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKING------EL 72
VL+ ++ + + R+ ++ +V+ + +R+ ++ + K G L
Sbjct: 12 VLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSAL 71
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+ +
Sbjct: 72 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFD 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I V + + E E+ K EY + +L P+
Sbjct: 132 DAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ R +LR D ++ S + G+ + L P F +
Sbjct: 192 ANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L T P G + + +KR
Sbjct: 252 LSSMPVGEITQPIRIPNGFIILKLEEKR 279
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 60/313 (19%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116
R AL + + + +E+I+ ++++ + + I V F +S
Sbjct: 120 RAALARDGLSFDDAREQVKREMIISRVRQRRVAER-IQVSEQEVKNFLASDLGKMQMSEE 178
Query: 117 ---------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------IQSIW 144
++D K G +Q +A + W
Sbjct: 179 YRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGW 238
Query: 145 PDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + G + +++ + +N+ E +R +L
Sbjct: 239 RKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIK 298
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ +++ + R++ +D +L K S+ + G ++ + L P
Sbjct: 299 PSE---IRSEAATQQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVP 355
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEA 302
+F+ + +Q T P+ TQ G + + +R E A + + K ++
Sbjct: 356 EFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQ 415
Query: 303 EYVKKLRSNAIIH 315
+++++R A +
Sbjct: 416 TWLRQIRDEAYVE 428
>gi|313496769|gb|ADR58135.1| Chaperone surA [Pseudomonas putida BIRD-1]
Length = 439
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKING------EL 72
VL+ ++ + + R+ ++ +V+ + +R+ ++ + K G L
Sbjct: 12 VLLGVALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSAL 71
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+
Sbjct: 72 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFE 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I V + + E E+ K EY + +L P+
Sbjct: 132 DAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ R +LR D ++ S + G+ + L P F +
Sbjct: 192 ANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L T P G + + +KR
Sbjct: 252 LSSMPVGEITQPIRIPNGFIILKLEEKR 279
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 60/313 (19%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116
R AL + + + +E+I+ ++++ + + I V F +S
Sbjct: 120 RAALARDGLSFEDAREQVKREMIISRVRQRRVAER-IQVSEQEVKNFLASDLGKMQMSEE 178
Query: 117 ---------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------IQSIW 144
++D K G +Q +A + W
Sbjct: 179 YRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGW 238
Query: 145 PDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + G + +++ + +N+ E +R +L
Sbjct: 239 RKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIK 298
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ +++ + R++ +D +L K S+ + G ++ + L P
Sbjct: 299 PSE---IRSEAATQQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVP 355
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEA 302
+F+ + +Q T P+ TQ G + + +R E A + K ++
Sbjct: 356 EFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQALGVLRNRKYDEELQ 415
Query: 303 EYVKKLRSNAIIH 315
+++++R A +
Sbjct: 416 TWLRQIRDEAYVE 428
>gi|77461354|ref|YP_350861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens Pf0-1]
gi|121956432|sp|Q3K5T4|SURA_PSEPF RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|77385357|gb|ABA76870.1| putative chaperone [Pseudomonas fluorescens Pf0-1]
Length = 426
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 104/299 (34%), Gaps = 15/299 (5%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIA 76
+ + + R+ ++ +V+ + +R+ ++ G L++
Sbjct: 4 ALFLGTAANAAVQSIDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGLPPPGVLDQQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ LIVE L+ Q E+SGI +N A+ ++ E F L + G+ ++
Sbjct: 64 LERLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNNMTPEQFRIALSRDGLSYEDARE 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + + V + + E E+ K E + +L P++
Sbjct: 124 QIRREMVISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESANSE 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKK 252
R +L+ D ++ S + G + + L P F + L
Sbjct: 184 AIQSAARKAMEVYQQLKQGADFGQMAVANSASDNALEGGDMGWRKAAQLPPPFDRELSSM 243
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + T P T G + + +KR + ++ + +P + E E + L
Sbjct: 244 ATGDITQPARTPGGFIILKLLEKRGGESQMRDEVHVRHILVKPSPVRDEAKTKELAQSL 302
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 38/289 (13%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT----FDSNTVNYFFVQHARNTG 114
R+ ++ + E+ L + K Q E+ + + N +Q A
Sbjct: 133 RVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESANSEAIQSAARKA 192
Query: 115 LSAED-------FSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-----NDFMLKYGNLEME 162
+ F DN + W + + + ++
Sbjct: 193 MEVYQQLKQGADFGQMAVANSASDNALEG---GDMGWRKAAQLPPPFDRELSSMATGDIT 249
Query: 163 IPA------------NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
PA K+ ++ E +R +L K + + +R+
Sbjct: 250 QPARTPGGFIILKLLEKRGGESQMRDEVHVRHILVKP---SPVRDEAKTKELAQSLYNRI 306
Query: 211 RLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
+D +L K S+ + G ++ + L P+F+ ++ KS + P+ TQ G
Sbjct: 307 EAGEDFAELAKKYSEDPGSALNGGDLNWIDPNALVPEFRAVMAKSPQGQLSKPFQTQYGW 366
Query: 268 EYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +R E A + K ++ +++++R A +
Sbjct: 367 HVLEVLGRRATDSTEQAREQQAMTVLRNRKYDEELQTWLRQIRDEAYVE 415
>gi|323495831|ref|ZP_08100899.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio
sinaloensis DSM 21326]
gi|323319047|gb|EGA71990.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio
sinaloensis DSM 21326]
Length = 431
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 103/275 (37%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + ++ ++ +I +NG VI + DI I LK
Sbjct: 1 MKFWKQSLLAVLAASQFGLASAQPVALDKINVIVNGGVILESDIDTSIKTLKANAKKSGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + ++LI++TL++QE E+ GI D N +N + A+N + E S +
Sbjct: 61 GLPTADVLRQQVTEKLIIDTLQQQEAERIGIRIDDNRLNEAIEEIAKNNNQTIEQLSDSI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
+G+ + F++ + + + + L E+ + T +Y I
Sbjct: 121 AAEGLEYSEFREQVRKEIAATEARNALVRRRINILPAEVDNLANILAQETNATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ + N + ++++ K+ ++ + G ++ + ++
Sbjct: 181 IQLRV--NDGDDASAIEQQAKEIVAKLNNGSDFATMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + + +++ + P+ + G + I D +
Sbjct: 239 PTIFADQVGVQNKGSIIGPFRSGVGFHILKIEDVK 273
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 59/151 (39%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ + V E R +L I + + VQK + + +L + S+
Sbjct: 274 GLETVAVTEVNARHIL--IRPTVILSDDGVQKELNEIIARIQSGEATFGELARQYSQDPG 331
Query: 229 VSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ Y P+F++ + + P+ T G + + D+R + + A+
Sbjct: 332 SAAQNGELGYQTSDLYVPEFKHQVDTLPEGKISQPFKTVHGWHIVEVLDRRQVDRTDSAM 391
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + + ++++LR++A +
Sbjct: 392 KNKAYRILFNRKFNEEASAWLQELRASAFVE 422
>gi|104779703|ref|YP_606201.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas entomophila L48]
gi|95108690|emb|CAK13384.1| putative peptidyl-prolyl cis-trans isomerase A [Pseudomonas
entomophila L48]
Length = 439
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 103/268 (38%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72
+++ ++ + + R+ ++ +V+ + +R+ ++ G L
Sbjct: 12 LMLGAVLLSGAVHAAVQPIDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPAGAL 71
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S E F + L G+ +
Sbjct: 72 EQQVLERLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNGMSLEQFRAALAHDGLSYD 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I V + + E E+ N K EY + +L P++
Sbjct: 132 DAREQIKREMIISRVRQRRVAERIQVSEQEVKNFLNSDLGKMQLSEEYRLANILIPTPES 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ R +L+ D +L ++ + + G+ + L P F +
Sbjct: 192 ANSDAIQAAARQAGDVYQQLKQGADFARLAIARSASENALEGGEMGWRKAGQLPPDFAKM 251
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + T P G + + +KR
Sbjct: 252 LSSMATGDVTQPIRIPNGFIILKLEEKR 279
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 99/315 (31%), Gaps = 64/315 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 120 RAALAHDGLSYDDAREQIKREMIISRVRQRRVAER-IQVSEQEVKNFLNSDLGKMQLSEE 178
Query: 119 -DFSSFL----------------DKQGIGDNHFK---QYLA--------------IQSIW 144
++ L + G K + + W
Sbjct: 179 YRLANILIPTPESANSDAIQAAARQAGDVYQQLKQGADFARLAIARSASENALEGGEMGW 238
Query: 145 PDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
V + G + +++ + ++ E +R +L
Sbjct: 239 RKAGQLPPDFAKMLSSMATGDVTQPIRIPNGFIILKLEEKRGGESSVLRDEVHVRHILIK 298
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ +++ + R++ +D ++L K S+ + G ++ + L P
Sbjct: 299 PSE---IRSDKATEQLAERLYDRIKNGEDFSELAKSFSEDPGSALNGGDLNWVDPNSLVP 355
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN---TPTKIEKH 300
+F+ + +Q T P+ TQ G + + +R + +A K ++
Sbjct: 356 EFREQMANAQQGEVTRPFRTQYGWHVLEVMGRRAT--DSTAQAREQQAMNVLRNRKYDEE 413
Query: 301 EAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 414 LQTWLRQIRDEAYVE 428
>gi|89094171|ref|ZP_01167114.1| peptidyl-prolyl cis-trans isomerase SurA [Oceanospirillum sp.
MED92]
gi|89081646|gb|EAR60875.1| peptidyl-prolyl cis-trans isomerase SurA [Oceanospirillum sp.
MED92]
Length = 430
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 103/276 (37%), Gaps = 13/276 (4%)
Query: 14 KLLTTYFVLIIFCIVPIV-SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
KL + ++P+ S+ + RI +N +I ++ +R ++ + Q +
Sbjct: 4 KLHKLISAAALSLLLPVSHSHAAEIPLDRIAAVVNEGIILQSELEQRTSITREQLQSRNT 63
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L K + LI+E+++KQ E++G+ + +N A GLS + F L
Sbjct: 64 RIPPEHILRKQVLNRLIIESIQKQMAEQNGVRVSDSQLNGAIANIAAQNGLSIDQFREAL 123
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
+G N ++ + + + V +N + E E+ N + K+ E+L+
Sbjct: 124 IAEGRDYNQAREQIRNEMLINSVQQNLVNRRIRVSEQELSNFLNSEDGKSQASAEFLLGH 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L + P + +L D + S + G + ++
Sbjct: 184 ILIATPSQASPEIIQQAESKAKEIFDKLNNGADFAETAVEFSNAPNALKGGDLGWRKANE 243
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L ++K S + P + G + DKR
Sbjct: 244 LPEALSKAVRKLSPGEFSKPVRSPSGFHILLAKDKR 279
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 7/157 (4%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ +K+ + + L+ +L + + Q KR R+ +D L K
Sbjct: 274 LAKDKRGGAVQLIDQRLVSHILLKPTEIRTNEQA---KRQISQLYQRIASGEDFAALAKE 330
Query: 223 ASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR-DL 278
S G + + P+F+ ++ + + P+ ++ G + + D R +
Sbjct: 331 FSDDPASGSEGGSLGWTQNGQMVPEFEQVMNSTAVGQVSEPFESRFGWHILTVLDTRTED 390
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
GE + A K + + +++++RS A +
Sbjct: 391 MGETMQENRARATIRKRKFNEELSNWLREIRSQAYVD 427
>gi|218509345|ref|ZP_03507223.1| probable peptidyl-prolyl cis-trans isomerase protein [Rhizobium
etli Brasil 5]
Length = 147
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
EY+++ ++F IP+ K KR +AE SR + P C++ + FA+ + DV++
Sbjct: 1 TEYMLQQIIFVIPEAK--RGAITGKRKGEAEASRSKFP-GCDQAKVFAATMRDVAVRDLG 57
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+L ++ P ++ L+++++ NTT VT KGVEY+AIC +R + + A + ++
Sbjct: 58 RMLAPEIPPDWKPLVEQAKGNTTGTRVTDKGVEYLAICSQRQVSDDQAAEMVFRQEDLDK 117
Query: 296 KIE--------KHEAEYVKKLRSNAIIHYY 317
++ +Y+ +LR A I Y+
Sbjct: 118 SKAGKNGPPENENSKKYLDELRKKAQIAYH 147
>gi|121956435|sp|Q88QT4|SURA_PSEPK RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 427
Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 12/263 (4%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKING------ELEKIAV 77
++ + + R+ ++ +V+ + +R+ ++ + K G LE+ +
Sbjct: 5 ALLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSALEQQVL 64
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
+ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+ + ++
Sbjct: 65 ERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFDDAREQ 124
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + I V + + E E+ K EY + +L P+ +
Sbjct: 125 VKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQMSEEYRLANILIPTPEAANSDD 184
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
R +LR D ++ S + G+ + L P F +L
Sbjct: 185 IQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAGQLPPDFAKMLSSMP 244
Query: 255 -NNTTNPYVTQKGVEYIAICDKR 276
T P G + + +KR
Sbjct: 245 VGEITQPIRIPNGFIILKLEEKR 267
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 60/313 (19%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116
R AL + + + +E+I+ ++++ + + I V F +S
Sbjct: 108 RAALARDGLSFDDAREQVKREMIISRVRQRRVAER-IQVSEQEVKNFLASDLGKMQMSEE 166
Query: 117 ---------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------IQSIW 144
++D K G +Q +A + W
Sbjct: 167 YRLANILIPTPEAANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGW 226
Query: 145 PDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + G + +++ + +N+ E +R +L
Sbjct: 227 RKAGQLPPDFAKMLSSMPVGEITQPIRIPNGFIILKLEEKRGGSENVLRDEVHVRHILIK 286
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ +++ + R++ +D +L K S+ + G ++ + L P
Sbjct: 287 PSE---IRSEAATEQLAERLYDRIKNGEDFGELAKSFSEDPGSALNGGDLNWVDPNSLVP 343
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEA 302
+F+ + +Q T P+ TQ G + + +R E A + + K ++
Sbjct: 344 EFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQALSVLRNRKYDEELQ 403
Query: 303 EYVKKLRSNAIIH 315
+++++R A +
Sbjct: 404 TWLRQIRDEAYVE 416
>gi|167646489|ref|YP_001684152.1| SurA domain-containing protein [Caulobacter sp. K31]
gi|167348919|gb|ABZ71654.1| SurA domain [Caulobacter sp. K31]
Length = 452
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 104/266 (39%), Gaps = 23/266 (8%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----KLQKINGEL---EKIAVQELI 81
V+ ++ +S + +N ++I+ D+ +R+ LL LQ L E+ A++ LI
Sbjct: 47 APVAPRANPLSESVAAVVNDDIISSYDLMQRMRLLMVTSGLQPTQENLPQLEQEALRSLI 106
Query: 82 VETLKKQE------IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
E ++ QE +K I V A+ L+ + + L QG+G + +K
Sbjct: 107 DEHVQMQELRRVEKAQKITIISTDKEVEEQIEDIAKGNNLTGQQLTQQLRAQGVGIDTWK 166
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ S W + + + + +I A +++ + + +Y + V
Sbjct: 167 AQIRADSSWQAWISGRYGSRLRIGDDQIKAFERRQAEAASKPQYQVSEVFIDAGRVGGME 226
Query: 195 QGFVQKRIKDAEESRLRLPKDC---NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
A++ ++ + +F++ + G A ++ ++ P+ ++
Sbjct: 227 TAV-----NGAKQLVTQMQQGAPFPAVARQFSASPTAANGGDAGWISPGEMPPEVDAAIE 281
Query: 252 KS-QNNTTNPYVTQKGVEYIAICDKR 276
+ + P + GV I + +KR
Sbjct: 282 QLRPGQLSAPIPVRDGVYIIYLREKR 307
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
++K ++ V ++P + +Q V K + + ++ +C LE A K+
Sbjct: 304 REKRSGAKTALVDLKQVALALPKDA--SQAQVDAANKVLLDLKPKIV-NCETLEATAGKV 360
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
V G +DL P FQ + ++P T G+ IA+C KR G + +
Sbjct: 361 EGVVAGDLGEAEITDLAPAFQQAANTLKVGQVSDPIRTDAGLHLIAVCGKRQSGAQAPTR 420
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + ++ Y++ LR++A I
Sbjct: 421 DQIENRLRGQQLALISKRYLRDLRNSATIE 450
>gi|114569774|ref|YP_756454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris
MCS10]
gi|114340236|gb|ABI65516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris
MCS10]
Length = 435
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 106/292 (36%), Gaps = 21/292 (7%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRIALLKL 65
T++ + + ++ + P+ + + A ++ + +N E IT D+ R+ L+
Sbjct: 8 TNMRLLMTCAKRIVLSLLAFVAPMCATNAHAQTTEGVAALVNDEPITTVDVRNRMRLIIA 67
Query: 66 QK--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
++ A++ L+ E L+ Q + I + + A +
Sbjct: 68 STGMSQIDEGTLSRIQDQAMRGLVDEHLQLQAASEYDIEVSDAEITNSLLDLADRNNTTI 127
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR 176
+ L G+ + + L + W +V + + E +I A ++ + +
Sbjct: 128 DVIIQDLQSSGVDVSTLRHQLEAEIAWQIIVNGRYGSRIRISEQQIELALERLAASASQP 187
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
++ I +LF +P Q + +Q+ I + + + +F+ + G +
Sbjct: 188 QFRIFEMLFEVP-GPGQEEQTIQRVITVMNQLQ-QGATFPELARQFSDAPSAANGGDIGW 245
Query: 237 LLESDLHPQFQNLLKKSQNN---------TTNPYVTQKGVEYIAICDKRDLG 279
+ S L P+ ++ + + +NP G IA+ RD
Sbjct: 246 ITASQLQPEVAAIMPQMRGQYDQSGGRGALSNPIEVPGGFMVIALVGARDGT 297
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 9/137 (6%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ A T +Y + + G + + + C + E
Sbjct: 287 VIALVGARDGTTTLQYDLVQITVPTSALTDTTAGTFARELDASP--------TCAQAEAV 338
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
AS+I + + P ++ L+ + T + G++ + +CD+ G
Sbjct: 339 ASRIPGAIYTPLGSISAEAVLPAIRDALQPLDEGENTGVLQSGVGLQALIVCDRAIAGPG 398
Query: 282 IALKAYLSAQNTPTKIE 298
+ + L +Q ++
Sbjct: 399 VPTRDDLESQLRGQQLS 415
>gi|91776502|ref|YP_546258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus
flagellatus KT]
gi|122070650|sp|Q1GZC0|SURA_METFK RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|91710489|gb|ABE50417.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus
flagellatus KT]
Length = 437
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 103/278 (37%), Gaps = 12/278 (4%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KIN 69
F + + + F A RI ++ VIT+ ++ RI + Q +
Sbjct: 5 VFKTIARHGLIALFFFFSISAMAAEVAKMDRIVAIVDQGVITEKELEDRIQTVIAQLEKQ 64
Query: 70 GE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
G L+K ++ LI + L+ Q ++G+ D ++ + A LS +F
Sbjct: 65 GTQLPPRDVLQKQILERLINDRLQLQYAAQTGLRVDDAQLDKTIERIAEQNKLSTGEFRK 124
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLI 180
L+ +GI F++ + + I + + + + E EI Q +N E+ +
Sbjct: 125 ALEAEGIPYRKFREDIRNEIILARLREREVDNRVNVTESEIDNFLTTQSSRNDIQDEFEV 184
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLE 239
+L P+ + K +A L+ D ++ ++ + + G +
Sbjct: 185 AHILIRAPEESTPEELQKLKAKAEAALKELQSGADFAQVSAGYSDAPNALEGGILGWKAS 244
Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
S L F + L+ + + G + + ++R
Sbjct: 245 SQLPSLFVDALQALQPGQLSPVLRSPNGYHILKLLNRR 282
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 90/298 (30%), Gaps = 57/298 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL----------------- 115
+ E+I+ L+++E++ + + ++ F + +
Sbjct: 137 REDIRNEIILARLREREVDNR-VNVTESEIDNFLTTQSSRNDIQDEFEVAHILIRAPEES 195
Query: 116 SAEDFSSFLDKQGIGDNHFK-----QYLAIQ------------SIWPD-------VVKND 151
+ E+ K + ++ W V
Sbjct: 196 TPEELQKLKAKAEAALKELQSGADFAQVSAGYSDAPNALEGGILGWKASSQLPSLFVDAL 255
Query: 152 FMLKYGNLE-----------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
L+ G L +++ + + V + +R +L + + + ++ ++
Sbjct: 256 QALQPGQLSPVLRSPNGYHILKLLNRRGGSSPLVVDQTHVRHILIKLSE--VVSELEAEQ 313
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
+I +E +++ + G + D P F+ + N +
Sbjct: 314 KINSIKERLDHGADFAELARQYSEDASANNGGDLGWTNAGDTVPAFEKAMNALDINEISA 373
Query: 260 PYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
P T G I + ++R + + + + K + +++ +LR A + Y
Sbjct: 374 PVRTPFGWHIIQVLERRKQDMTQESARLKARQEIRARKADDAFQDWLSELRDRAYVEY 431
>gi|152984838|ref|YP_001346133.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
PA7]
gi|150959996|gb|ABR82021.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
PA7]
Length = 430
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELE----- 73
+ + ++ ++ R+ ++ +VI + +R+ + L K L
Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71
Query: 74 -KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+
Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMATIAQRNGMSLEQFQAALTRDGLSYA 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
+ + + + V + + E E+ K EY + +L +P+
Sbjct: 132 DARDQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ R +L+ D +L ++ + + G+ + + L F ++
Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+ + T P T G + + +KR
Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKR 279
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ + E +R +L +++++ +K + R++ +D +L K S+
Sbjct: 277 EKRGGSKMVRDEVHVRHILLK--PSEIRSDAETEK-LAQKLYERIQSGEDFGELAKSFSE 333
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G ++ L P+F+ ++ Q + P+ +Q G + + +R E
Sbjct: 334 DPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSE 393
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 394 KFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVE 427
>gi|122070668|sp|Q4K4X7|SURA_PSEF5 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 426
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 107/302 (35%), Gaps = 15/302 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGE------LEKIA 76
+ + + ++ ++ +V+ + +R+ ++ + K G LE+
Sbjct: 4 ALFLSTAASAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGVPPTSVLEQQV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ LIVE L+ Q E+SGI +N A+ +S E F + L G+ +
Sbjct: 64 LERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNSMSIEQFRAALAHDGLSYEDARD 123
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + I V + + E E+ K E + +L P++
Sbjct: 124 QVRREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESANSE 183
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252
R +L+ D +L + + + G + + L P F + L
Sbjct: 184 AIQSAARQAMEVYQQLKQGADFAQLAIARSGSDNALEGGDMGWRKAAQLPPPFDRELSAM 243
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + T P T G + + DKR G + ++ + + + E+ +KL
Sbjct: 244 AVGDITQPARTPGGFIILKLLDKRGGGNQVRDEVHVRHILIKPSEIRSEEETKRLAQKLY 303
Query: 310 SN 311
Sbjct: 304 DR 305
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 98/316 (31%), Gaps = 60/316 (18%)
Query: 56 ISK-RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
I + R AL + +E+I+ ++++ + + I V F
Sbjct: 104 IEQFRAALAHDGLSYEDARDQVRREMIISRVRQRRVAER-IQVSEQEVKNFLASDLGKMQ 162
Query: 115 LS-----------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------I 140
LS +E S + KQ LA
Sbjct: 163 LSEELHLANILIPTPESANSEAIQSAARQAMEVYQQLKQGADFAQLAIARSGSDNALEGG 222
Query: 141 QSIWPDVVK-----NDFMLKYGNLEMEIPAN------------KQKMKNITVREYLIRTV 183
W + + + ++ PA K+ N E +R +
Sbjct: 223 DMGWRKAAQLPPPFDRELSAMAVGDITQPARTPGGFIILKLLDKRGGGNQVRDEVHVRHI 282
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
L + + + + KR+ R+ +D +L K S+ + G ++ +
Sbjct: 283 LIKPSEIRSEEE---TKRLAQKLYDRIEAGEDFAELAKSYSEDPGSALNGGDLNWIDPNA 339
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEK 299
L P+F+ ++ K+ + P+ + G + + +R + + K ++
Sbjct: 340 LVPEFREVMAKTPQGQLSKPFKSPYGWHVLEVLGRRATDSTSQAREQQAMTVLRNRKYDE 399
Query: 300 HEAEYVKKLRSNAIIH 315
+++++R A +
Sbjct: 400 ELQTWLRQIRDEAYVE 415
>gi|170723956|ref|YP_001751644.1| SurA domain-containing protein [Pseudomonas putida W619]
gi|169761959|gb|ACA75275.1| SurA domain [Pseudomonas putida W619]
Length = 441
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72
VL+ ++ + + R+ ++ +V+ + +R+ ++ L
Sbjct: 14 VLLGAVLLSGAVHAAVQPLDRVVAIVDNDVVMQSQLDQRVQEVQQTIAKRGGGVPPTSAL 73
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E+ ++ LIVE L+ Q E+SGI +N A+ G+S + F + L + G+ +
Sbjct: 74 EQQVLERLIVENLQLQIGERSGIRITDEELNQAIGTIAQRNGMSLDQFRAALARDGLSFD 133
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I V + + E E+ K +Y + +L P+
Sbjct: 134 DAREQVKREMIISRVRQRRVAERIQVSEQEVKNFLASDMGKMQMSEDYRLANILIPTPEG 193
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ R +LR D ++ S + G+ + + L P+F L
Sbjct: 194 ANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGWRKAAQLPPEFAKL 253
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + T P G I + +KR
Sbjct: 254 LSSMATGDITQPLRIPSGFIIIKLEEKR 281
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 99/313 (31%), Gaps = 60/313 (19%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116
R AL + + + +E+I+ ++++ + + I V F +S
Sbjct: 122 RAALARDGLSFDDAREQVKREMIISRVRQRRVAER-IQVSEQEVKNFLASDMGKMQMSED 180
Query: 117 ---------------AEDFSSFLDKQGIGDNHFKQ-----YLA------------IQSIW 144
++D K G +Q +A + W
Sbjct: 181 YRLANILIPTPEGANSDDIQKAARKVGDVYQQLRQGADFGQMAIANSASENALEGGEMGW 240
Query: 145 PDVVK-----NDFMLKYGNLEMEIPAN-------------KQKMKNITVREYLIRTVLFS 186
+ + ++ P + +N+ E +R +L
Sbjct: 241 RKAAQLPPEFAKLLSSMATGDITQPLRIPSGFIIIKLEEKRGGSENVLRDEVHVRHILIK 300
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ +++ + R++ +D +L K S+ + G ++ + L P
Sbjct: 301 PSE---IRSEAATEQLAERLYERIKGGEDFAELAKSFSEDPGSALNGGDLNWVDPNSLVP 357
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEA 302
+F+ + +Q T P+ TQ G + + +R E A + K ++
Sbjct: 358 EFREQMANAQQGVVTKPFKTQYGWHVLEVLGRRATDSTEQAREQQAMNVLRNRKYDEELQ 417
Query: 303 EYVKKLRSNAIIH 315
+++++R A +
Sbjct: 418 TWLRQIRDEAYVE 430
>gi|103486961|ref|YP_616522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingopyxis
alaskensis RB2256]
gi|98977038|gb|ABF53189.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingopyxis
alaskensis RB2256]
Length = 446
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 97/264 (36%), Gaps = 15/264 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEIEK 92
R T+NGE+IT DI +R+AL+++ N EL LI E L+ QE
Sbjct: 54 RPSATVNGEIITATDIEQRMALIRIANNNVELPPEEEQRLRNQVFSNLIDEKLQIQEARA 113
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ IT D N VN F + A + E F+++L +G KQ + + W ++ +
Sbjct: 114 ADITIDENVVNEQFARLAARFKQTPEQFAAYLASKGSSAAAVKQQIRGEFAWDRLLSRNI 173
Query: 153 MLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRL 210
E+ KQ E+ + + + PDN +K I+ +
Sbjct: 174 QSTTNVSTEEVDLIVKQMEAAKGQDEFHLGEIYLSATPDNIAAVTENARKIIQALQAG-- 231
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
+F+ V G ++ + L ++ P G+
Sbjct: 232 --GSFAAYARQFSEASTAVVGGDLGWVKGAQLPASMAEAAMQMQPGQLVGPIEVPGGISI 289
Query: 270 IAICDKRDLGGEIALKAYLSAQNT 293
+ + D+R + A LS +
Sbjct: 290 MLLIDRRQVLTADPRDAILSLKQI 313
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 59/180 (32%), Gaps = 5/180 (2%)
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
A+Q +V + ++ + I + + ++ + P + Q
Sbjct: 269 AMQMQPGQLVGPIEVPGGISIMLLIDRRQVLTADPRDAILSLKQISLDFPAGTTEAQA-- 326
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
++ R C + A ++ + + + + P L+ TT
Sbjct: 327 -SQLASRFAQATRTIAGCGAADAVAEQLGASVVSRDNIAMRALPAPLQATLVDLQVGQTT 385
Query: 259 NPY-VTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
P+ +G+ + +C + + + K+ K Y++ LR +A+I Y
Sbjct: 386 QPFGAANEGISVLVLCGRDMPETATAPNLEQIEQKLLEEKVNKRAQRYLRDLRRDAVIEY 445
>gi|329903502|ref|ZP_08273518.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Oxalobacteraceae bacterium IMCC9480]
gi|327548325|gb|EGF33013.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Oxalobacteraceae bacterium IMCC9480]
Length = 475
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 109/284 (38%), Gaps = 12/284 (4%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+ + + ++ + F + I +N +VIT D++ R+AL++
Sbjct: 29 LISLAAACLQPASAQFTPAGQAAPAAPRKSEPQVIDSIVAVVNSDVITRLDLNSRVALVE 88
Query: 65 LQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+ LEK ++ +IV+ + Q SGI D ++ + A LS
Sbjct: 89 TRMKQQGSQLPQRALLEKQILERMIVDRAQLQLAADSGIKIDDVMLDRAMARLAEQNKLS 148
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--T 174
+DF + L+++G + F++ + + + + + K E E+ KN
Sbjct: 149 MQDFRNQLEREGTPFSRFREEIREEIAMQRIREREVDNKLQITESEVDNYLDAEKNAPQI 208
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGK 233
EY + +L IP+N Q ++ D +LR D K ++ I + G+
Sbjct: 209 QPEYNLAQILIRIPENATAEQIAARRARADDVARQLRSGADFAKLAASYSDSIEALKGGE 268
Query: 234 AQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ L F + + + ++ + + G + + KR
Sbjct: 269 LGWRTADRLPQLFVDAVARLNEGELSAVIKSASGFHILKVAGKR 312
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 7/146 (4%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGK 233
V++ R +L + N + +++ D ++ +L K S + G
Sbjct: 328 VQQTRARHILIKV--NTIVTAAEALRKLTDLKQRLDNKAATFEELAKLYSNDLSASKGGD 385
Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSA 290
++ D P+F+ + + P T G I + +D+ E +
Sbjct: 386 LGWIYPGDTVPEFERAMNLLKPGEVSAPIETPFGYHLIEVIERKSQDVSQER-KRLSARQ 444
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316
K+E+ +++++LR A + Y
Sbjct: 445 ALRERKLEEATQDWIRQLRDRAYVEY 470
>gi|254243688|ref|ZP_04937010.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
2192]
gi|126197066|gb|EAZ61129.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
2192]
Length = 430
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 114/306 (37%), Gaps = 15/306 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELE----- 73
+ + ++ ++ R+ ++ +VI + +R+ + L K L
Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71
Query: 74 -KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ +
Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQAALTRDGLSYS 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + V + + E E+ K EY + +L +P+
Sbjct: 132 DAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ R +L+ D +L ++ + + G+ + + L F ++
Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305
+ + T P T G + + +KR + ++ + + + E +
Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLA 311
Query: 306 KKLRSN 311
+KL
Sbjct: 312 QKLYER 317
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ + E +R +L + +++ R++ +D +L K S+
Sbjct: 277 EKRGGSKMVRDEVHVRHILLKPSE---IRSEAETEKLAQKLYERIQSGEDFGELAKSFSE 333
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G ++ L P+F+ ++ Q + P+ +Q G + + +R E
Sbjct: 334 DPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSE 393
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 394 KFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVE 427
>gi|53805075|ref|YP_113118.1| peptidyl-prolyl cis-trans isomerase SurA [Methylococcus capsulatus
str. Bath]
gi|81682783|sp|Q60B78|SURA_METCA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|53758836|gb|AAU93127.1| peptidyl-prolyl cis-trans isomerase SurA [Methylococcus capsulatus
str. Bath]
Length = 454
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 101/281 (35%), Gaps = 13/281 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQK 67
++ + + + A RI ++ VI + ++ +++ L+ +
Sbjct: 3 ISSFRKGRWLGALALFAVVCWSMADAAVDRIVAVVDDGVILESELVRKVDEIKRSLRASR 62
Query: 68 IN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ L + ++ +IV+ ++ Q EK GI D +T+ Q A+ L+ + F
Sbjct: 63 ASLPPDSVLVRQVLERMIVDKIQIQMAEKMGIQVDDDTLRMAVSQIAQRNNLTPDQFRRS 122
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLI 180
L ++GI F + + + + + + E+ + + REY +
Sbjct: 123 LAREGIDYGDFLDQVRSEIAMGRLRASQINNQIKISDREVEHYLEAQGGSGAVADREYRL 182
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLE 239
+L + P ++ + D L+ D +++ + G +
Sbjct: 183 GHILIATPREASPDEVKKARERADRVVKELKAGLDFKDASIRYSDDPQALEGGDLGWRKL 242
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S++ ++ + ++P + G + + R +G
Sbjct: 243 SEIPSHIAEVVGGMKDGEVSDPIRSPGGYHIVKMLAMRGVG 283
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 59/155 (38%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + + + +R +L + K A ++R+ D +L + S
Sbjct: 277 LAMRGVGEAKLTKTHVRHILIRPNEVLSDEDA---KNKLLALKTRIENGDDFAELARGHS 333
Query: 225 KIHDVSI--GKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGG- 280
+I G ++ L P F+ + +N ++P TQ G I + ++++
Sbjct: 334 DDKGSAIKGGDLGWVKPGALVPPFEEAMNALDENQLSDPVQTQFGWHLIQVLERQESSDT 393
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
LK + K+++ +++K+R A +
Sbjct: 394 NEVLKNRARDELFKRKVDEETELWLRKIRDEAYVE 428
>gi|116054322|ref|YP_788767.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218889335|ref|YP_002438199.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
LESB58]
gi|254237192|ref|ZP_04930515.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
C3719]
gi|296387100|ref|ZP_06876599.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
PAb1]
gi|115589543|gb|ABJ15558.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169123|gb|EAZ54634.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
C3719]
gi|218769558|emb|CAW25318.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
LESB58]
Length = 430
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 113/306 (36%), Gaps = 15/306 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELE----- 73
+ + ++ ++ R+ ++ +VI + +R+ + L K L
Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71
Query: 74 -KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+
Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQAALTRDGLSYA 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + V + + E E+ K EY + +L +P+
Sbjct: 132 DAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ R +L+ D +L ++ + + G+ + + L F ++
Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305
+ + T P T G + + +KR + ++ + + + E +
Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLA 311
Query: 306 KKLRSN 311
+KL
Sbjct: 312 QKLYER 317
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ + E +R +L + +++ R++ +D +L K S+
Sbjct: 277 EKRGGSKMVRDEVHVRHILLKPSE---IRSEAETEKLAQKLYERIQSGEDFGELAKSFSE 333
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G ++ L P+F+ ++ Q + P+ +Q G + + +R E
Sbjct: 334 DPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSE 393
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 394 KFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVE 427
>gi|110834907|ref|YP_693766.1| survival protein SurA [Alcanivorax borkumensis SK2]
gi|122070614|sp|Q0VMV4|SURA_ALCBS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|110648018|emb|CAL17494.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Alcanivorax borkumensis SK2]
Length = 435
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 99/270 (36%), Gaps = 12/270 (4%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KING 70
+ + ++P+ S M RI +N I ++ +RI + LQ
Sbjct: 14 GLLAMAVLMIPVWSQAKVQMLDRIVAVVNDGAIMASELDERINTIALQFQEKGQQLPSPA 73
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + +I+E L+ Q E++GI D ++N AR +S EDF++ L + G
Sbjct: 74 ILREQVLDRMILERLQLQLAERAGIKVDEASLNEALAGIARQNDMSLEDFAATLREDGYS 133
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIP 188
F++ + + + + + + E+ + + K + ++ + +L +P
Sbjct: 134 WTQFREQIRQDMVISRLQQRSVASRIQITDREVDRFLSSELGKQMFQEDFRLGHILIRVP 193
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQ 247
Q + RL D +L + + + G + + F
Sbjct: 194 SEARPQQISQARAKAKEIIERLEAGSDFQQLAIALSDGPNALEGGDLGWRPAAQWPTLFA 253
Query: 248 N-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ + + P + G + + D++
Sbjct: 254 ENAINLKKGEFSQPLRSGAGFHILKMIDRK 283
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 55/149 (36%), Gaps = 6/149 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI--KDAEESRLRLPKDCNKLEKFA 223
+++ V +Y +R VL Q + + + + + +
Sbjct: 281 DRKGGAEKVVTQYHVRHVLIKADALTSAEQAQQRAIRLHDEVAAGKRQFKETAAEFSDDP 340
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ ++ + ++ P+F+ ++ + + + +Q G ++ + D RD
Sbjct: 341 GSARN--GGELGWVNKGEMVPEFEQVMLNTPVGELSPVFESQFGWHFLRVDDIRDADMST 398
Query: 283 ALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310
+ + Q + E+ +V++ RS
Sbjct: 399 EFRRMQATQALQKRRFEEELETWVQEKRS 427
>gi|15595791|ref|NP_249285.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
PAO1]
gi|9946466|gb|AAG03983.1|AE004495_7 peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
PAO1]
Length = 430
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 113/306 (36%), Gaps = 15/306 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELE----- 73
+ + ++ ++ R+ ++ +VI + +R+ + L K L
Sbjct: 12 LALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVL 71
Query: 74 -KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ ++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+
Sbjct: 72 TQQVLERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQTALTRDGLSYA 131
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + V + + E E+ K EY + +L +P+
Sbjct: 132 DAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEA 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ R +L+ D +L ++ + + G+ + + L F ++
Sbjct: 192 ASSDVIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSM 251
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYV 305
+ + T P T G + + +KR + ++ + + + E +
Sbjct: 252 IGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLA 311
Query: 306 KKLRSN 311
+KL
Sbjct: 312 QKLYER 317
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ + E +R +L + +++ R++ +D +L K S+
Sbjct: 277 EKRGGSKMVRDEVHVRHILLKPSE---IRSEAETEKLAQKLYERIQSGEDFGELAKSFSE 333
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G ++ L P+F+ ++ Q + P+ +Q G + + +R E
Sbjct: 334 DPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSE 393
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 394 KFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVE 427
>gi|326386746|ref|ZP_08208367.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208799|gb|EGD59595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 467
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 93/266 (34%), Gaps = 17/266 (6%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVETLKKQEIE 91
R +NGE+IT DI +R+AL+ G L ++ LI ETL+ QE +
Sbjct: 73 RATAIVNGEIITGTDIDQRLALIINANGGGNKIPAEEQERLRAQVLRNLIDETLQIQEAK 132
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
GI D VN F + A+ G + +L G K+ + + W +++
Sbjct: 133 GVGIEIDEEEVNQSFDRVAQQNFGQNTAALEKYLTSIGSSAASLKRQIKGEMAWQRLLRR 192
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEES 208
+ + E+ +MK EY I + + +N+ Q K ++ +
Sbjct: 193 NVQPYINVSDSEVREMMDRMKAAKGTEEYHIGEIFLSATDENRSQVLANADKIVEQLK-- 250
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267
+ +F+ G ++ L + P G
Sbjct: 251 --KGGSFTAYARQFSEASTAAVGGDLGWIRLVQLPQELATSATTMGPGQLAGPIALAGGY 308
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNT 293
I + DKR + A + LS +
Sbjct: 309 SIIYVIDKRQVLTADARDSILSLKQV 334
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPY-VTQKGV 267
++ C +++ A++I S+ + DL Q+ +LK + T P+ + GV
Sbjct: 358 VKAIHGCGQVDAAATQI-GASVVANDQIRARDLPVALQDTVLKLAVGEATPPFGSIEDGV 416
Query: 268 EYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ +C + D E L +Q ++ K Y++ LR +A+I Y
Sbjct: 417 RVLMLCGRDDPKVENGPSFEQLQSQIEDDRVNKRAQTYLRDLRRDAVIEY 466
>gi|83945293|ref|ZP_00957642.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis
alexandrii HTCC2633]
gi|83851463|gb|EAP89319.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis
alexandrii HTCC2633]
Length = 411
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 103/274 (37%), Gaps = 11/274 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-------KL 65
+ +L ++ S I +N + IT D+ R+ L+
Sbjct: 1 MAFRLALTILAGIALMSAAPTASAQQVEGIAAVVNDQPITTLDVRDRMRLIISSAGVQPT 60
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+++ ++ +++ L+ ETL+ Q+ + + + V+ A +G + ++ L
Sbjct: 61 EEMLARIQDQSIRGLVDETLQLQQAAEFDLEVEEAEVDDAIADIATRSGATVQEVEDDLA 120
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVL 184
GI N +Q + + W +V + + + +I + +++ + +Y + +
Sbjct: 121 ASGIDINTLRQQVKAEIAWQILVSGRYRSRIRISDQQIETALDRYIQSASQPQYRLGEIF 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
I + + I+ + + ++F+ + G YL S ++
Sbjct: 181 VEITPQGGEERAV--GIIQTIYDQLRQGAPFQAVAQQFSDAASASAGGDTGYLPLSGINA 238
Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
Q + + +NP G + +A+ D+RD
Sbjct: 239 QVAEAVTQMEPGQISNPIRVPGGFQIVALIDRRD 272
>gi|297537786|ref|YP_003673555.1| SurA domain-containing protein [Methylotenera sp. 301]
gi|297257133|gb|ADI28978.1| SurA domain protein [Methylotenera sp. 301]
Length = 448
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 99/273 (36%), Gaps = 16/273 (5%)
Query: 20 FVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKIN------ 69
F+L+ + + + A RI ++ VIT+ ++ RIA + Q
Sbjct: 21 FILLASVLFIGNQFNAQAADIVKLDRIVAIVDQTVITEQELESRIATVTAQFKKQGTELP 80
Query: 70 --GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K ++ LI +TL+ Q + G+ D N ++ + A L+ +FS L K
Sbjct: 81 EESVLRKQILERLITDTLQIQYAAQIGLKVDDNQLDKTVERIADQNNLTLTEFSEALAKD 140
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLF 185
GI F+ + + + + + + E EI Q N E+ I +L
Sbjct: 141 GISMRKFRADIRNEITVARLREREVDGRVNVSESEIDNYLTSQASLNENTDEFEISHILI 200
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHP 244
P+ K D S+L K+ S + G + S +
Sbjct: 201 RTPEEGATEDIQKAKAKVDEALSQLNSGVSFAKVSASFSDAPNALEGGSLGWKKGSQMPA 260
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
F + LK Q + P + G + + +KR
Sbjct: 261 LFLDALKNMQAGEVSAPLRSPNGFHLLKLTNKR 293
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 64/171 (37%), Gaps = 6/171 (3%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ + + +++ R +L I + + + DA +
Sbjct: 274 VSAPLRSPNGFHLLKLTNKRGGNSPLVIQQTHARHILIKITEVMSDKEAETKI---DAIK 330
Query: 208 SRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
RL + L + S+ S G ++ D P F+N + + + P +Q
Sbjct: 331 ERLDNGEKFEVLARQFSEDSTASNGGDLNWVNPGDTVPPFENAMNALKDGQISAPVRSQF 390
Query: 266 GVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I + ++R + + + + K ++ +++++LR A +
Sbjct: 391 GWHIIQVMERRSQDMSKESARLKARQEIRARKADEAYQDWIRELRDRAYVE 441
>gi|294634977|ref|ZP_06713494.1| peptidylprolyl cis-trans isomerase SurA [Edwardsiella tarda ATCC
23685]
gi|291091576|gb|EFE24137.1| peptidylprolyl cis-trans isomerase SurA [Edwardsiella tarda ATCC
23685]
Length = 434
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 119/318 (37%), Gaps = 20/318 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+K T + ++ C ++ + + ++ ++ V+ + D+ + +KL
Sbjct: 1 MKNWRTLILGVVLCANT--AFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQAGQ 58
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
N L ++ LI++ ++ Q ++ G+ + ++ A L+ + S L
Sbjct: 59 QLPDNATLRHQILERLIMDNIQLQMAKRMGLEVSDSELDNAINGIAAQNHLTPQQLRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQK-MKNITVREYLIRT 182
G+ ++ + + + +V N+ + L E+ A KQ +N +
Sbjct: 119 AADGLDYKAYRAQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQISSQNSGETAVNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q ++ ++ +LR D KL S G+ + +
Sbjct: 179 ILIPLPENPTQQQVSEAQQQAESLVQQLRHGADFAKLAATYSADPQALKGGEMGWGRLQE 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK----AYLSAQNTPTK 296
L F L+ + + P + G + + D R +A+ ++ + +P
Sbjct: 239 LPTLFAEALQSAKKGDIVGPIRSGVGFHILRVNDLRGDQANVAVTEVHARHILLRTSPVM 298
Query: 297 IEKHEAEYVKKLRSNAII 314
+ ++ L A I
Sbjct: 299 SDAQARAKLEAL--AAQI 314
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 86/301 (28%), Gaps = 69/301 (22%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT------GLS---------- 116
+E+++ ++ E+ + +T V+ Q + LS
Sbjct: 129 RAQIRKEMLISEVRNNEVRRR-VTILPQEVDALAKQISSQNSGETAVNLSHILIPLPENP 187
Query: 117 -----------AEDFSSFLDKQG----------IGDNHFKQYLAIQSIWPDV-------- 147
AE L K + W +
Sbjct: 188 TQQQVSEAQQQAESLVQQLRHGADFAKLAATYSADPQALKG---GEMGWGRLQELPTLFA 244
Query: 148 ----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ G + + + N+ V E R +L + + +
Sbjct: 245 EALQSAKKGDIVGPIRSGVGFHILRVNDLRGDQANVAVTEVHARHILLRT--SPVMSDAQ 302
Query: 198 VQKRIKDAEESRLRLPK-DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKS 253
+ ++ +A ++++ + + K S + G + + S P F++ L+K +
Sbjct: 303 ARAKL-EALAAQIKSGQITFEQAAKQYSDDPGSAQKGGDLGWAVPSMYDPAFRDALMKLN 361
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + P + G I + R + E + K + ++++ R+
Sbjct: 362 KGEISQPVHSNFGWHLIQLLGTRQVDRTDEAQKERAYRI-LFNRKFAEEAQTWLQEQRAA 420
Query: 312 A 312
A
Sbjct: 421 A 421
>gi|295689679|ref|YP_003593372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis
ATCC 21756]
gi|295431582|gb|ADG10754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis
ATCC 21756]
Length = 452
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 47/292 (16%), Positives = 105/292 (35%), Gaps = 21/292 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALL----KLQKINGEL---EKIAVQELIVETLKKQEIE 91
S + +N ++I+ D+ +R+ LL +Q L ++ A++ LI E L+ QE+
Sbjct: 57 SESVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIQQEALRSLIDERLQMQELR 116
Query: 92 KSG------ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ I V+ A++ ++++ L +QGIG + ++ L S W
Sbjct: 117 RVEKQQKITIISTDKEVDEQVADIAQSNKMTSDQLKQSLVQQGIGLDTWRAQLRADSSWQ 176
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++ + + E +I A ++++ +Y I V
Sbjct: 177 SWIQGRYGSRLRIGEDQIKAYQRRLAESAAKPQYQISEVFLDASRVGGMEVAVNGAAQLI 236
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVT 263
A+ + +F+ + G ++ + ++ + L++ + P
Sbjct: 237 AQMQQG--APFAAVARQFSGSATAANGGDVGWVNQGEMPTEVDEALEQLRPGQLSRPIQV 294
Query: 264 QKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ GV I + DKR ++ A + + + LR
Sbjct: 295 KDGVYIIYLRDKRAGSKTAIVDLKQVAAPLPADATEAQVAAATKLLTDLRPK 346
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 2/133 (1%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ P + V K + R ++ C LE A K+ + G +DL
Sbjct: 319 QVAAPLPADATEAQVAAATKLLTDLRPKI-NSCQTLETVAGKVDGLVAGDLGEAEITDLA 377
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
P FQ K ++P T G+ IA+C KR G + + ++
Sbjct: 378 PAFQEAASKLDIGQISDPIRTDAGLHLIAVCGKRQGGANAPTHDQIENRLRGQQLALISK 437
Query: 303 EYVKKLRSNAIIH 315
Y++ LR+ A I
Sbjct: 438 RYLRDLRNQATIE 450
>gi|121596392|ref|YP_988288.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
gi|120608472|gb|ABM44212.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
Length = 471
Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 109/309 (35%), Gaps = 17/309 (5%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-ALLKLQKINGE------- 71
+ + + + I +N E IT+ ++ +R +++ G
Sbjct: 47 SAATLLPPAGATASNAPRQADYIVAVVNSEPITNNEVRQRTERVVQQIASQGGQVPPQEL 106
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L K ++ LI+E ++ Q+ +++GI D VN AR +S ++ L GI
Sbjct: 107 LAKEVLERLILEKIQVQQAKETGIKVDDYAVNQAEQSVARQNSISVDEMHRRLAADGISK 166
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---EYLIRTVLFSIP 188
F++ L Q + + + D + ++E+ ++ + E + +L +P
Sbjct: 167 ERFREELRNQLLALRLRERDVESRVRVSDLEVDQYLREQRQAAGPGKLELNLGHILVKVP 226
Query: 189 DNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+N ++ R ++A +++ + G F
Sbjct: 227 ENAGPDEVAQRSARAQEALAKVQAGGDFGAVAREYSDAPEGANGGLLGLRPADRYPELFV 286
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEA 302
N +++ + P + G + + DK G ++ + E+ A
Sbjct: 287 NATQQASVGSVVGPVRSPSGFHILKVVDKTQSGVPTTAVQSHARHILLRTNANLSERQAA 346
Query: 303 EYVKKLRSN 311
E ++ LR
Sbjct: 347 ERLEDLRDR 355
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 56/152 (36%), Gaps = 5/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
Q T + R +L N ++ +R++D + R D L + S+
Sbjct: 317 QSGVPTTAVQSHARHILLRT--NANLSERQAAERLEDLRDRVARGGADFAALAREYSQDG 374
Query: 228 DVS-IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G + P+F+ L + P V++ GV I + ++R+ +
Sbjct: 375 SAKDGGDLGWASPGRYVPEFEEALNALRPGEISRPVVSRFGVHLIQLLERREAKLTQREQ 434
Query: 286 AYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K+++ A ++++ R A + Y
Sbjct: 435 REMVRDTVREKKLDEAFATWIQEARGRAYVEY 466
>gi|157368971|ref|YP_001476960.1| peptidyl-prolyl cis-trans isomerase SurA [Serratia proteamaculans
568]
gi|157320735|gb|ABV39832.1| SurA domain [Serratia proteamaculans 568]
Length = 432
Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 101/276 (36%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K T + ++ C ++ + ++ ++ V+ + D+S + +KL
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLESDVSTLLQSVKLNAQQAGQ 58
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GI ++ A +S + S L
Sbjct: 59 QLPDDKTLRHQILERLIMDNIQLQMAKKMGINVSDADLDKAIGNIAAQNKMSIDQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
+G+ N ++ + + + +V N+ + L E+ A + +N + E I
Sbjct: 119 AYEGLNYNTYRSQIRKEMLISEVRNNEVRRRVTILPQEVDSLAAQVGAQNGSDTEMNISH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + D KL S G + +
Sbjct: 179 ILIPLPENPSQAQVDDAEALAKKLMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQE 238
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ F L+ + + P + G + + D R
Sbjct: 239 IPTLFAERLVNAKKGDVVGPIRSGVGFHILKVNDIR 274
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 86/295 (29%), Gaps = 57/295 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+++ ++ E+ + +T V+ Q G E
Sbjct: 129 RSQIRKEMLISEVRNNEVRRR-VTILPQEVDSLAAQVGAQNGSDTEMNISHILIPLPENP 187
Query: 119 ---DFSSF----------------LDKQGIGDNHFKQYLAIQ-SIWP-----------DV 147
K I + Q L W +
Sbjct: 188 SQAQVDDAEALAKKLMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQEIPTLFAERL 247
Query: 148 VKNDFMLKYGNLEM-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V G + ++ + ++++V E R +L P L + K
Sbjct: 248 VNAKKGDVVGPIRSGVGFHILKVNDIRGANQSVSVTEVHARHILLK-PSVVLTDDQARAK 306
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
+ AE + K ++ ++ + G + P F++ L+K S+ +
Sbjct: 307 LQEVAEAIKSGRAKFADEAKQLSQDPGSALQGGDLGWASPDIYDPAFRDALMKLSKGEVS 366
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
P + G I + D R + A + + + K + ++++ R+ A
Sbjct: 367 QPVHSSFGWHLIQLLDTRQVDKTDAAQKDRAYRMLFNRKFAEEAQTWMQEQRAQA 421
>gi|238918641|ref|YP_002932155.1| peptidyl-prolyl cis-trans isomerase SurA [Edwardsiella ictaluri
93-146]
gi|238868209|gb|ACR67920.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 434
Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 37/268 (13%), Positives = 102/268 (38%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + ++ + + ++ ++ V+ + D+ + +KL L
Sbjct: 7 LILGVALCANTAFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ ++ Q ++ G+ + ++ A+ +S + S L G+
Sbjct: 67 RHQILERLIMDNVQLQMAKRMGLEISDSELDNAINGIAQQNHISMQQLRSRLAADGLDYK 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A KQ +N + +L +P+N
Sbjct: 127 TYRDQIRKEMLISEVRNNEVRSRVTILPQEVDALAKQIGSQNSGETAVNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
Q Q ++ ++ +L K +++ + G+ + +L F
Sbjct: 187 PTQQQVSEAQKQAESLIQQLHQGASFAKLAAAYSADPQALKGGEMGWGRLQELPTLFAEA 246
Query: 250 LK-KSQNNTTNPYVTQKGVEYIAICDKR 276
L+ + + P + G + + D R
Sbjct: 247 LQSAKKGDIVGPIRSGVGFHILRVNDLR 274
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 93/328 (28%), Gaps = 67/328 (20%)
Query: 46 INGEV----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
ING I+ + R+A L +E+++ ++ E+ +S +T
Sbjct: 100 INGIAQQNHISMQQLRSRLAADGLDYK--TYRDQIRKEMLISEVRNNEV-RSRVTILPQE 156
Query: 102 VNYFFVQHARNT-----------------GLSAEDFSSFLDKQGIGDNHFKQ-----YLA 139
V+ Q + + S + Q LA
Sbjct: 157 VDALAKQIGSQNSGETAVNLSHILIPLPENPTQQQVSEAQKQAESLIQQLHQGASFAKLA 216
Query: 140 I------------QSIWPDV------------------VKNDFMLKYGNLEMEIPANKQK 169
+ W + + G + + +
Sbjct: 217 AAYSADPQALKGGEMGWGRLQELPTLFAEALQSAKKGDIVGPIRSGVGFHILRVNDLRGD 276
Query: 170 MKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+++V E R +L + Q + ++ + ++ + + +
Sbjct: 277 QASVSVTEVHARHILLRPSPVMSDTQARAKLEALSAQIKSGQITFEQAAKEYSQDPGSAQ 336
Query: 228 DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIAL 284
G + + S P F++ L+K ++ + P + G I + D R + E
Sbjct: 337 --KGGDLGWAVPSMYDPAFRDALMKLNKGEISQPVHSNFGWHLIQLLDTRQVDRTDEAQK 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ K + ++++ R+ A
Sbjct: 395 ERAYRM-LFNRKFAEEAQTWLQEQRAAA 421
>gi|209964864|ref|YP_002297779.1| peptidyl-prolyl cis-trans isomerase family protein, putative
[Rhodospirillum centenum SW]
gi|209958330|gb|ACI98966.1| peptidyl-prolyl cis-trans isomerase family protein, putative
[Rhodospirillum centenum SW]
Length = 433
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 102/315 (32%), Gaps = 12/315 (3%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----K 64
L L + + + R +N EVI+ D+ R+ +
Sbjct: 13 LPTAAALCGVLLCAGVLLAGRPAAAQGQGPVERAAALVNEEVISMSDLMNRLQMALSSSG 72
Query: 65 LQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L ++ ++ LI E L+ QE + I ++ A+ LS +F
Sbjct: 73 LPDTPETRQRLLPQVLRLLIDEVLQIQEARRLEIRVTEQDIDRALENLAQQNRLSLGEFQ 132
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLI 180
LD G+ +Q L W +V+ + E+ A +++K N EYL+
Sbjct: 133 RLLDASGVPVASLRQQLLASVAWSRLVQRRIRPTVSVSDDEVQAQLERIKANAGKPEYLV 192
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ ++ D+ N+ V + E +F+ + G +L +
Sbjct: 193 SEIFLAVDDDA--NEAEVSRLADRLVEQIAGGANFGAVARQFSQSAGAFTGGDLGWLQQG 250
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIE 298
L +++ + P G + + D+R + ++ Q
Sbjct: 251 QLEQALDTAVQQLQPGQFSRPIRGVNGYHILWLRDQRAVAAGNPADIQVAVGQLVLPADP 310
Query: 299 KHEAEYVKKLRSNAI 313
+ ++ R A
Sbjct: 311 ANPEAGLEAARQIAQ 325
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 10/155 (6%)
Query: 164 PANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
N + + ++ P N ++ ++A C+ L
Sbjct: 285 DQRAVAAGNPADIQVAVGQLVLPADPANPEAGLEAARQIAQEA--------ASCDALSAA 336
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
A +I G+A DL + +++ T P++T +G+ + +CD+ G
Sbjct: 337 AQRIPGAQQGQAPLTRLGDLPAEISSIVGALGVGTPTQPFLTDRGIMILMVCDRMVPEGS 396
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + +IE + Y++ LR +A I Y
Sbjct: 397 IPPADQVRDAIAGERIEMLQRRYLRDLRRDATIEY 431
>gi|154706423|ref|YP_001425383.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway
5J108-111]
gi|154355709|gb|ABS77171.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway
5J108-111]
Length = 321
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/327 (20%), Positives = 117/327 (35%), Gaps = 19/327 (5%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ TS+ + + T +P + +I +N E+IT +++
Sbjct: 1 MWKKILTSMVIILSV--TSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58
Query: 59 ---RIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ ++ Q +K + +LI + L+ Q + + I +N +N + ++
Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMK 171
LS L ++GI F+ L Q I + + +I A KQ
Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
I EY I T+L +P + Q Q K +L+ K D
Sbjct: 179 QIASTEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMKMHPGSAD--- 235
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +L F + +LK N T P G I + DK +
Sbjct: 236 --LGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+EK +++ +LRS+A IH Y
Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318
>gi|71909270|ref|YP_286857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas
aromatica RCB]
gi|122070644|sp|Q479U4|SURA_DECAR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|71848891|gb|AAZ48387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas
aromatica RCB]
Length = 438
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 116/313 (37%), Gaps = 21/313 (6%)
Query: 20 FVLIIFCIVPIVSYKSWAM------SSRIRTTINGEVITDGDISKR--IALLKLQKINGE 71
+L+I C+ +++ A + RI + +VIT ++ R AL +LQK
Sbjct: 11 LILLICCLGGMLAQPLSAAPQDPVEADRIVAVVGSDVITYFELRTRLTAALKQLQKQGTP 70
Query: 72 L------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L E+ ++ LI+E + Q ++G+ D ++ + A ++ F + L+
Sbjct: 71 LPPQDVLERQMLERLIMERAQLQYGRETGMKIDDTQLDLAIGRIAAGNKMTVPQFRAALE 130
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVL 184
K G+ F++ + + + + + + K E EI + + EY + +L
Sbjct: 131 KDGVQYAQFREEIRNEMVTVRLREREVDSKLVISEGEIDNYLANQTATGSEEEYQLAHIL 190
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLH 243
P++ Q ++ + R R ++ +L S D G + + L
Sbjct: 191 LRAPESATPEQLQKLRQRGEQALKRARAGENFAQLTAAFSDAPDALQGGDLGWRPLARLP 250
Query: 244 PQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIE 298
+ + ++ + G + + KR + ++ +++ E
Sbjct: 251 ALYAEAGSRLQSGEVSDLLRSSAGFHIVKLVSKRGGSAPASVQQTHARHILIRSSEVLSE 310
Query: 299 KHEAEYVKKLRSN 311
++ +R
Sbjct: 311 AEATRKLEAVRER 323
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 63/172 (36%), Gaps = 8/172 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V + G +++ + + +V++ R +L + R +A
Sbjct: 265 VSDLLRSSAGFHIVKLVSKRGGSAPASVQQTHARHILI---RSSEVLSEAEATRKLEAVR 321
Query: 208 SRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
R+ D + + S+ G+ +L D P+F+ + + N + +
Sbjct: 322 ERIANGVDFAEQARLYSQDGSAAKGGELGWLNPGDTVPEFERAMDALKINEVSQVVQSPF 381
Query: 266 GVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G+ I + +RD+ E +A K+++ +++++LR +
Sbjct: 382 GMHLIQVLERRERDVSAER-QRAVARQALRERKLDEAYQDWLRQLRDRTYVE 432
>gi|83648743|ref|YP_437178.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC
2396]
gi|122070647|sp|Q2S9C1|SURA_HAHCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|83636786|gb|ABC32753.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC
2396]
Length = 434
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 115/287 (40%), Gaps = 21/287 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIA------VQELIVETLKKQEIE 91
R+ +N +++ ++ R + +K L++ L A + +L++E+++ Q +
Sbjct: 35 DRVVAVVNDDIVLYSELQDRASRIKDKLRQQKTPLPPEAVLHEKVLDQLVLESIQMQMAD 94
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ GI + +N A+ G++ + F L ++G+ ++ + + I V +
Sbjct: 95 RGGIRVSDSQLNQTMQNIAKQNGMTLDQFQQALSEEGVTYQSAREQIRREMIISRVQQRS 154
Query: 152 FMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E E+ K EY + +L ++P+N + ++ E+ R
Sbjct: 155 VDSRVRVTEKEVNDFLKSASAKEQRAEEYHLAHILIALPENP--SDAQRKEAESKVEKIR 212
Query: 210 LRLPKDCNKLEKFASKIHDVS----IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQ 264
+L + ++ A D S G + + F ++ K + T+ P
Sbjct: 213 SQLDQG-VDFKQLAITYSDASTATQGGDLGWRKPDQVPSLFADVAPKLAPGQTSEPIRNS 271
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPT---KIEKHEAEYVKKL 308
GV ++A+ +KR ++ ++ + + E + ++++
Sbjct: 272 SGVHFVAMLEKRGGVSKVVEQSKVRHILVQQNELRDEIAAKKLIEEI 318
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
K+ + V + +R +L K++ + +++ +D +L K S
Sbjct: 280 LEKRGGVSKVVEQSKVRHILV---QQNELRDEIAAKKLIEEIYGKVQAGEDFAELAKAYS 336
Query: 225 --KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-G 280
+ + G ++ D+ P+F +++++ + P+ + G + + D+R+ G
Sbjct: 337 DDAVSAAAGGSLDWVNPGDMVPEFDQMMRETPVGAVSKPFQSTFGWHILQVQDRREADIG 396
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + K E+ ++ ++R A +
Sbjct: 397 DRLMASQARQVLHRRKYEEELQNWLSEIRDEAFVQ 431
>gi|122070665|sp|Q9I5U3|SURA_PSEAE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 417
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 111/302 (36%), Gaps = 15/302 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELE------KIA 76
++ ++ R+ ++ +VI + +R+ + L K L +
Sbjct: 3 AALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVLTQQV 62
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ LI+E +++Q ++SGI +N A+ G+S E F + L + G+ ++
Sbjct: 63 LERLIIENIQQQIGDRSGIRISDEELNQAMGTIAQRNGMSLEQFQTALTRDGLSYADARE 122
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + + V + + E E+ K EY + +L +P+ +
Sbjct: 123 QVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEAASSD 182
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
R +L+ D +L ++ + + G+ + + L F +++
Sbjct: 183 VIQAAARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSL 242
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ T P T G + + +KR + ++ + + + E + +KL
Sbjct: 243 AVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLAQKLY 302
Query: 310 SN 311
Sbjct: 303 ER 304
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ + E +R +L + +++ R++ +D +L K S+
Sbjct: 264 EKRGGSKMVRDEVHVRHILLKPSE---IRSEAETEKLAQKLYERIQSGEDFGELAKSFSE 320
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G ++ L P+F+ ++ Q + P+ +Q G + + +R E
Sbjct: 321 DPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSE 380
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 381 KFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVE 414
>gi|212213438|ref|YP_002304374.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212]
gi|212011848|gb|ACJ19229.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212]
Length = 321
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/327 (20%), Positives = 117/327 (35%), Gaps = 19/327 (5%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ TS+ + + T +P + +I +N E+IT +++
Sbjct: 1 MWKKILTSMVVILSV--TSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58
Query: 59 ---RIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ ++ Q +K + +LI + L+ Q + + I +N +N + ++
Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKKVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMK 171
LS L ++GI F+ L Q I + + +I A KQ
Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
I EY I T+L +P + Q Q K +L+ K D
Sbjct: 179 QIASTEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMKMHPGSAD--- 235
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +L F + +LK N T P G I + DK +
Sbjct: 236 --LGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+EK +++ +LRS+A IH Y
Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318
>gi|164685824|ref|ZP_01945801.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii 'MSU Goat Q177']
gi|165918731|ref|ZP_02218817.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 334]
gi|212219488|ref|YP_002306275.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154]
gi|164601340|gb|EAX33680.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii 'MSU Goat Q177']
gi|165917559|gb|EDR36163.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 334]
gi|212013750|gb|ACJ21130.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154]
Length = 321
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 66/327 (20%), Positives = 117/327 (35%), Gaps = 19/327 (5%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ TS+ + + T +P + +I +N E+IT +++
Sbjct: 1 MWKKILTSMVIILSV--TSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58
Query: 59 ---RIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ ++ Q +K + +LI + L+ Q + + I +N +N + ++
Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMK 171
LS L ++GI F+ L Q I + + +I A KQ
Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
I EY I T+L +P + Q Q K +L+ K D
Sbjct: 179 QIASTEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMKMHPGSAD--- 235
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +L F + +LK N T P G + + DK +
Sbjct: 236 --LGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIVKLLDKE--AKNTVSDQQIQR 291
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+EK +++ +LRS+A IH Y
Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318
>gi|163802667|ref|ZP_02196558.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Vibrio sp. AND4]
gi|159173555|gb|EDP58375.1| 4-hydroxythreonine-4-phosphate dehydrogenase [Vibrio sp. AND4]
Length = 427
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 114/267 (42%), Gaps = 15/267 (5%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELE 73
LI+ ++ + A ++ +N VI DI + L+ G L+
Sbjct: 7 LIVTTLLSCGVTAAPAELDKVAVIVNDGVILQSDIDTAMKTLQANARQSGKSLPSAGVLK 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ V++LI++TL+ QE ++ G+ D N +N + ARN S E ++ + +G+ +
Sbjct: 67 EQVVEKLIIDTLQGQEAKRIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQMEGLNYSE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + ++ T +Y I + D+K
Sbjct: 127 FREQIRKEIAASEARNALVRRRINILPAEVDSLTDQLAQETNATVQYKIGHIQLRFSDDK 186
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+++ + +A +L+ D +++ ++ + G ++ + ++ F + +
Sbjct: 187 DKSEVEAE---ANALVKKLKAGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQI 243
Query: 251 K-KSQNNTTNPYVTQKGVEYIAICDKR 276
K +++ N P+ + G + I D +
Sbjct: 244 KMQNKGNIIGPFRSGIGFHILKIEDVK 270
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 59/154 (38%), Gaps = 12/154 (7%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH- 227
++ + V E R +L P L + G K+ E R+ + A++
Sbjct: 271 GLETVAVTEVNARHILIK-PTVILSDDGA----KKELNEFIRRIKAGEASFGQLATQYSQ 325
Query: 228 ----DVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GE 281
G+ + P+F++ ++ + + P+ T G + + D+R + +
Sbjct: 326 DPGSAAQNGELGFQTPDLYVPEFKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTD 385
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A+K K + ++++LR++A +
Sbjct: 386 SAIKNKAYRILFNRKFNEEAGAWMQELRASAFVE 419
>gi|215919309|ref|NP_820955.2| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 493]
gi|206584194|gb|AAO91469.2| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii RSA 493]
Length = 321
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/327 (20%), Positives = 118/327 (36%), Gaps = 19/327 (5%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ TS+ + + T +P + +I +N E+IT +++
Sbjct: 1 MWKKILTSMVIILSV--TSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58
Query: 59 ---RIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ ++ Q +K + +LI + L+ Q + + I +N +N + ++
Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMK 171
LS L ++GI F+ L Q I + + +I A KQ
Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
I +EY I T+L +P + Q Q K +L+ K D
Sbjct: 179 QIASKEYHIATILIPLPASATQAQINHAKGKAALVLKQLQKGSSFETAMKMHPGSAD--- 235
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +L F + +LK N T P G I + DK +
Sbjct: 236 --LGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+EK +++ +LRS+A IH Y
Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318
>gi|254509382|ref|ZP_05121467.1| chaperone SurA [Vibrio parahaemolyticus 16]
gi|219547690|gb|EED24730.1| chaperone SurA [Vibrio parahaemolyticus 16]
Length = 431
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 104/275 (37%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKINGE 71
+K + + ++Y +I +N VI + DI I LK + NG+
Sbjct: 1 MKFWKKSLLALFAASQFTLAYAQPVALDKINVIVNSGVILESDIDTSIKTLKANARKNGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + ++LI++TL++QE E+ G+ D N +N + A+N + E S +
Sbjct: 61 GLPEQEVLRQQVTEKLIIDTLQQQEAERIGVRIDDNRLNQAIEEIAKNNNQTIEQLSDSI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
+G+ + F++ + + + + L E+ + T +Y I
Sbjct: 121 AAEGLEYSEFREQVRKEIAATEARNALVRRRINILPAEVDNLANILAQETNATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ + N + ++K+ KD ++ + G ++ + ++
Sbjct: 181 IQLRV--NDGDDASALEKQAKDIVAKLKEGADFATMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
F + + + + P+ + G + I D +
Sbjct: 239 PTIFADNINLENKGSVIGPFRSGVGFHILKIDDVK 273
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 60/151 (39%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ + V E R +L I + + VQK + + E +L + S+
Sbjct: 274 GLETVAVTEVNARHIL--IRPTVILSDEGVQKELNEIIERIQAGEATFGELARQYSQDPG 331
Query: 229 VSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ Y P+F++ + + P+ T G + + D+R + + A+
Sbjct: 332 SAAQNGELGYQTSDLYVPEFKHQVDTLPEGQISEPFKTVHGWHIVEVLDRRQVDRTDSAM 391
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + + ++++LR++A +
Sbjct: 392 KNKAYRILFNRKFNEEASAWLQELRASAFVE 422
>gi|269137960|ref|YP_003294660.1| peptidyl-prolyl cis-trans isomerase SurA [Edwardsiella tarda
EIB202]
gi|267983620|gb|ACY83449.1| peptidyl-prolyl cis-trans isomerase SurA [Edwardsiella tarda
EIB202]
gi|304558008|gb|ADM40672.1| Survival protein SurA precursor [Edwardsiella tarda FL6-60]
Length = 435
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 117/310 (37%), Gaps = 18/310 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72
+++ + ++ + + ++ ++ V+ + D+ + +KL + L
Sbjct: 7 LILGVALCANTAFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQADQQLPDNATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ ++ Q ++ G+ + ++ A+ +S + S L G+
Sbjct: 67 RHQILERLIMDNVQLQMAKRMGLEISDSELDNAINGIAQQNHISMQQLRSRLAADGLDYK 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A KQ +N + +L +P+N
Sbjct: 127 TYRAQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQIGSQNSGETAVNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
Q Q ++ ++ +L K +++ + G+ + +L F
Sbjct: 187 PTQQQVSEAQQQAESLIQQLHQGASFAKLAAAYSADPQALKGGEMGWGRLQELPTLFAEA 246
Query: 250 LK-KSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
L+ + + P + G + + D R ++ ++ + +P +
Sbjct: 247 LQSAKKGDIVGPIRSGVGFHILRVNDLRGDQANVSVTEVHARHILLRTSPVMSDAQARAK 306
Query: 305 VKKLRSNAII 314
++ L +A I
Sbjct: 307 LEAL--SAQI 314
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/331 (12%), Positives = 92/331 (27%), Gaps = 73/331 (22%)
Query: 46 INGEV----ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
ING I+ + R+A L +E+++ ++ E+ + +T
Sbjct: 100 INGIAQQNHISMQQLRSRLAADGLDYK--TYRAQIRKEMLISEVRNNEVRRR-VTILPQE 156
Query: 102 VNYFFVQHARNT------GLS---------------------AEDFSSFLDKQGI----- 129
V+ Q LS AE L +
Sbjct: 157 VDALAKQIGSQNSGETAVNLSHILIPLPENPTQQQVSEAQQQAESLIQQLHQGASFAKLA 216
Query: 130 -----GDNHFKQYLAIQSIWPDV------------------VKNDFMLKYGNLEMEIPAN 166
K + W + + G + +
Sbjct: 217 AAYSADPQALKG---GEMGWGRLQELPTLFAEALQSAKKGDIVGPIRSGVGFHILRVNDL 273
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ N++V E R +L + + + + +++ + K S+
Sbjct: 274 RGDQANVSVTEVHARHILLRT--SPVMSDAQARAKLEALSAQITSGKITFEQAAKEYSQD 331
Query: 227 HDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GGE 281
+ G + + S P F++ L+K ++ + P + G I + R + E
Sbjct: 332 PGSAQKGGDLGWAVPSMYDPAFRDALMKLNKGEISQPVHSNFGWHLIQLLGTRQVDRTDE 391
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ K + ++++ R+ A
Sbjct: 392 AQKERAYRM-LFNRKFAEEAQTWLQEQRAAA 421
>gi|307294654|ref|ZP_07574496.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobium
chlorophenolicum L-1]
gi|306879128|gb|EFN10346.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobium
chlorophenolicum L-1]
Length = 461
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 95/270 (35%), Gaps = 14/270 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ L ++ LI ETL+ QE + I
Sbjct: 73 AIVNGRIITGTDVDQRLALILTANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 132
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D ++ + + A N S F +L QG K+ + + W +++ +
Sbjct: 133 VDKAEIDQSYERVAANFRQSPSQFDQYLRAQGSSSASIKRQIEGELAWSRLLRRNIQPFV 192
Query: 157 GNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ + +M EY I + + P+N+ Q + I+ ++
Sbjct: 193 NVSEDEVKSVVDRMNAAKGSDEYRIGEIYLSATPENQQQIVANARNIIEQIKQG----GS 248
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
+F+ G ++ + L + + Q P GV I +
Sbjct: 249 FAAYARQFSEASTAAVGGDLGWVRPAQLPDELAQAAAEMQVGQLAGPIAVPGGVSIIYVM 308
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
DKR + A LS + +
Sbjct: 309 DKRKVLTADPRDALLSLKQLSVSFPAGTTK 338
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 93/288 (32%), Gaps = 33/288 (11%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ-ELIVETLKK----QEIEKS 93
+++ ++ G RI + L ++I I+E +K+ +
Sbjct: 196 EDEVKSVVDRMNAAKGSDEYRIGEIYLSATPENQQQIVANARNIIEQIKQGGSFAAYARQ 255
Query: 94 GITFDSNTV--NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ V + +V+ L + A + +
Sbjct: 256 FSEASTAAVGGDLGWVR--------PAQLPDELAQA-----------AAEMQVGQLAGPI 296
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ ++ + K + ++ + S P + Q +++R
Sbjct: 297 AVPGGVSIIYVMDKRKVLTADPRDALLSLKQLSVSFPAGTTKEQASA---KAADFAAQIR 353
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY-VTQKGVEY 269
K C + + KI + + DL PQ Q++L Q T P+ GV
Sbjct: 354 TIKGCGQANELGGKI-GADVVDNDNVKLRDLPPQLQDILLNLQVGEATPPFGSISDGVRV 412
Query: 270 IAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ +C + + A A + AQ ++ K Y++ LR +A+I Y
Sbjct: 413 LVVCGRDEASSAAAPNAEQIMAQLEEERVNKRARIYLRDLRRDAVIDY 460
>gi|237749066|ref|ZP_04579546.1| chaperone SurA [Oxalobacter formigenes OXCC13]
gi|229380428|gb|EEO30519.1| chaperone SurA [Oxalobacter formigenes OXCC13]
Length = 459
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 103/295 (34%), Gaps = 11/295 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--- 72
+F + + I +N +VIT G++++R+ L++ Q +
Sbjct: 21 FGVFFSATVLAQDNQAQPSKQVVVDSIAAIVNSDVITKGELNERVTLVEAQLKQQNIALP 80
Query: 73 -----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+K ++ +IVE + Q + G+ D ++ A +S F ++
Sbjct: 81 PRTEFQKQVLEHMIVERAQLQLAKDMGLRVDDTQLDRTIALMAEQNHMSLAQFKRQTEQN 140
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE-YLIRTVLFS 186
G F++ + + + + + K + E+ + + E + +L
Sbjct: 141 GTPFEKFREKVREEITMSRLRDREVVNKIQINDAEVDNLLGADSQLQMPEQLRLGHILIR 200
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQ 245
IP+N Q ++ + L+ D + ++ +S G + L
Sbjct: 201 IPENASPEQIAEKRARAEKVLDVLKSGGDFQQTAASYSDADEGLSGGDIGWRSTDRLPKS 260
Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
F + L N T + G + + D+R + A S +NT +I
Sbjct: 261 FVDALAGVKPGNVTGIIKSPNGFHILKVLDRRKMTNGAESVASASDKNTVQQIHA 315
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS- 230
TV++ R +L + N+L + ++++ D + + +L K S S
Sbjct: 307 KNTVQQIHARHILIKV--NQLVSADEAKRKLIDLRQRIINKSATFEELAKTYSNDGSASR 364
Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL- 288
G ++ D P+F+ ++ + P TQ G I + DK+ +++ +
Sbjct: 365 GGDLGWIYPGDTVPEFEKAMVALKPGEISEPIETQFGFHLIQVLDKK--TDDVSAERKRI 422
Query: 289 --SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K+ + E++++LR A + Y
Sbjct: 423 AAKQALRERKVAEATEEWLRQLRDKAYVEY 452
>gi|261855875|ref|YP_003263158.1| SurA domain protein [Halothiobacillus neapolitanus c2]
gi|261836344|gb|ACX96111.1| SurA domain protein [Halothiobacillus neapolitanus c2]
Length = 465
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 109/301 (36%), Gaps = 17/301 (5%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQ 78
+ M RI +N VIT ++ RI + Q +LE+ +
Sbjct: 40 AADLTPAAGEQMFDRIVAVVNQSVITQRQLNDRIQQVSSQINIQALSPSDFKQLEERVLD 99
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I E ++ Q ++ GIT D ++ A+ G+S + + +QG N ++ +
Sbjct: 100 RMITEEVELQRAKQIGITVDEQRLDSALDGIAQRNGMSLDQLQQAVTRQGEDWNAYRDNI 159
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
Q I ++ + + + + +I + + EY + +L S+P+N +Q
Sbjct: 160 RKQIIIDELKRREVYERVDITDRDIDEYLKQYMGADTDTTEYHLAQILISVPENATPSQV 219
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ- 254
K+ D + L+ +D K+ S D + G + S + F + +K +
Sbjct: 220 ENAKKRADDVMAALKAGQDFAKVSAERSDAPDATKGGDLGWRDMSRIPGLFTDTVKSLKT 279
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-----PTKIEKHEAEYVKKLR 309
+ + G + + +R A++ + +KLR
Sbjct: 280 GEISGLIRSPNGFHILKLLGERKRTAGNTQLTEYEAEHVLIQVNGKRDATAAKAQAEKLR 339
Query: 310 S 310
Sbjct: 340 Q 340
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 12/157 (7%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ N + EY VL + + AE+ R + + ASK
Sbjct: 301 RKRTAGNTQLTEYEAEHVLIQVNGKRDATAA-----KAQAEKLRQEIISGKATFAEIASK 355
Query: 226 IHDVSI-----GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
D G ++ SD+ P+F +L+++ + + TQ G ++ + R++
Sbjct: 356 YSDDKGSAQQGGLLGWVNPSDMVPEFATMLEQTPVGKISPVFQTQFGFHFLEVLKTREVQ 415
Query: 280 GEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+A + ++ Y+++LR+ A I
Sbjct: 416 VPTDKLRAQARQAIGQRRADEDLVNYIRRLRAEAYID 452
>gi|332185309|ref|ZP_08387058.1| PPIC-type PPIASE domain protein [Sphingomonas sp. S17]
gi|332015033|gb|EGI57089.1| PPIC-type PPIASE domain protein [Sphingomonas sp. S17]
Length = 475
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 101/268 (37%), Gaps = 20/268 (7%)
Query: 44 TTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGI 95
+N V+T D+ +R+AL L +++LI ETL+ QE + + I
Sbjct: 85 AIVNDTVLTGTDLDQRMALAMALNNVTKLSPEDRDRLRMQILRQLIDETLQIQEAKSAEI 144
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
T + ++ + + ++ G + ++FL + G + ++ + + W ++
Sbjct: 145 TVTAPEIDQAYARFSQQFGKTPTQMTAFLRQVGSSERSMRRQIEGELAWNRYLRKRVEPF 204
Query: 156 YGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ E+ A + +++ EY ++ + N+ Q+ +A + + K
Sbjct: 205 INVGDEEVNAIRARLEAAKGTEEYNLKEIFL------SANEATQQQVFANARQIIAEIQK 258
Query: 215 DCNKLEKFASKIHDVSIG----KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
E FA + S ++ + L P+ Q+ + Q P G
Sbjct: 259 GQQPFEYFARSFSEASTRAVNGDLGWVRAAQLPPELQSAAQSMQVGQVAGPIPIPGGFSI 318
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKI 297
+ + DKR + + LS + K
Sbjct: 319 LYLTDKRQVLTADPRDSRLSLKQLTIKF 346
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT-Q 264
+ + C +E+ A+ + + + L Q +L K Q T P+ + +
Sbjct: 363 AKATQAIRGCGDVERVATSLKAEVV-DNDQVTIRQLPAPLQEILLKMQIGQATPPFGSPE 421
Query: 265 KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+GV + +CD+ + G + + Q ++ + ++ LR +A+I Y
Sbjct: 422 QGVRSLVLCDREEPRSGNLPTSDQIQNQVEQQRVNLRANQKMRDLRRDAVIEY 474
>gi|161830191|ref|YP_001595995.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 331]
gi|161762058|gb|ABX77700.1| putative peptidyl-prolyl cis-trans isomerase surA [Coxiella
burnetii RSA 331]
Length = 321
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 67/327 (20%), Positives = 118/327 (36%), Gaps = 19/327 (5%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ TS+ + + T +P + +I +N E+IT +++
Sbjct: 1 MWKKILTSMVIILSV--TSISAFAQSTLPAPNATHEQSLDQIVAVVNDEIITQSELNHAL 58
Query: 59 ---RIALLKLQ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ ++ Q +K + +LI + L+ Q + + I +N +N + ++
Sbjct: 59 TAAKQQFMQRQISLPDQKTFKKQVLDQLIYQKLQLQVAKHNQIKVTNNEINAAVARISQA 118
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMK 171
LS L ++GI F+ L Q I + + +I A KQ
Sbjct: 119 NHLSQTALKQKLTQEGISYKEFRSQLQKQLIISKLQHQALQDTISINKSDIAAFQKQHAG 178
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
I +EY I T+L +P + Q Q K +L+ K D
Sbjct: 179 QIASKEYHIATILIPLPASATQAQINHAKGKAALILKQLQKGSSFETAMKMHPGSAD--- 235
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +L F + +LK N T P G I + DK +
Sbjct: 236 --LGWRSAKELPQVFVKTVLKMKPNEVTGPIQAPNGFHIIKLLDKE--AKNTVSDQQIQR 291
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+EK +++ +LRS+A IH Y
Sbjct: 292 IVYQQKVEKALQKWLTQLRSSAYIHIY 318
>gi|255020576|ref|ZP_05292639.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Acidithiobacillus caldus ATCC 51756]
gi|254969961|gb|EET27460.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Acidithiobacillus caldus ATCC 51756]
Length = 479
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 109/278 (39%), Gaps = 14/278 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVETLKKQEI 90
++ +N ++IT +++R+A ++ + + L + +Q++I++ ++ Q
Sbjct: 74 DKVVAVVNDDIITSLQLAQRVAAIRARLQQQDPNALPPEEVLRRQVLQQMILQDVELQIA 133
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+++GI D T++ AR L+ + L +QG F+ L + + + +
Sbjct: 134 KRAGIKVDQATLDQAIGNIARANNLTPDQLRQALAQQGQSWTQFEDDLRDRILVDRLTQQ 193
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + E+ +++K + + ++ + +PDN + +R RL
Sbjct: 194 EVESRIHIGPDEVKTFARQLKELGGVSFDLQQIFIPLPDNPTPDAISAARRQAQEIRDRL 253
Query: 211 RLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE 268
++L S D G+ ++ ++L P Q L+ + G
Sbjct: 254 EAGASFSRLAAEVSSSRDALQGGRLGWVKAAELPPAISQTLMSLKPGEISPVIPGPTGFH 313
Query: 269 YIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ D + E+ A + + ++++ EA
Sbjct: 314 IFKVLDTKHEEPTVTEVKAAAIVLRASNGLQLQEAEAR 351
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 51/150 (34%), Gaps = 5/150 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH- 227
K + TV E ++ + + + R +D E + + +++
Sbjct: 321 KHEEPTVTEVKAAAIVLRASNGLQLQEA--EARAQDIETALQGGTRFSELARRYSQDPST 378
Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALK 285
+ G+ ++ L + + LL ++P + + +R + G+ +
Sbjct: 379 AAAGGELGWVAPGKLPDELERTLLALQPGAVSSPVRVGDAIYILQAQAQRQVPVGDEQIL 438
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A Q + E+ +++R A +
Sbjct: 439 AAARMQLYNRIARQRLEEWQRRIRDGAYVE 468
>gi|222112631|ref|YP_002554895.1| sura domain-containing protein [Acidovorax ebreus TPSY]
gi|221732075|gb|ACM34895.1| SurA domain protein [Acidovorax ebreus TPSY]
Length = 471
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 47/309 (15%), Positives = 109/309 (35%), Gaps = 17/309 (5%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-ALLKLQKINGE------- 71
+ + + + I +N E IT+ ++ +R +++ G
Sbjct: 47 SAATLLPPAGATASNAPRQADYIVAVVNSEPITNNEVRQRTERVVQQIASQGGKVPPQEL 106
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L K ++ LI+E ++ Q+ +++GI D V+ AR +S ++ L GI
Sbjct: 107 LAKEVLERLILEKIQVQQAKETGIKVDDYAVSQAEQSVARQNSISVDEMHRRLAADGISK 166
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---EYLIRTVLFSIP 188
F++ L Q + + + D + ++E+ ++ + E + +L +P
Sbjct: 167 ERFREELRNQLLALRLRERDVESRVRVSDLEVDQYLREQRQAAGPGKLELNLGHILVKVP 226
Query: 189 DNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+N ++ R ++A +++ + G F
Sbjct: 227 ENAGPDEVAQRSARAQEALAKVQAGGDFGAVAREYSDAPEGANGGLLGLRPADRYPELFV 286
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEA 302
N +++ + P + G + + DK G ++ + E+ A
Sbjct: 287 NATQQASVGSVVGPVRSPAGFHILKVVDKTQSGVPTTAVQSHARHILLRTNANLSERQAA 346
Query: 303 EYVKKLRSN 311
E ++ LR
Sbjct: 347 ERLEDLRDR 355
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 5/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
Q T + R +L N ++ +R++D + R D L + S+
Sbjct: 317 QSGVPTTAVQSHARHILLRT--NANLSERQAAERLEDLRDRVARGGADFAALAREYSQDG 374
Query: 228 DVS-IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
G + P+F+ L + P V++ GV I + ++R+ +
Sbjct: 375 SAKDGGDLGWASPGRYVPEFEEALNALRPGEISRPVVSRFGVHLIQLLERREAKLTQREQ 434
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + K+++ A ++++ R A + Y
Sbjct: 435 RDMVRDTVREKKLDEAFATWIQEARGRAYVEY 466
>gi|296532230|ref|ZP_06894978.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
gi|296267447|gb|EFH13324.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
Length = 401
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 94/267 (35%), Gaps = 13/267 (4%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLK 86
+ A + I +NG+V+T G+++ R L L G L + L+ E L+
Sbjct: 2 AAPAQVNSIVAVVNGDVVTAGEVAGRARLFALNAGMGPAPDVVQRLRPQVTRLLVDERLR 61
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
QE+++ GI V + GL L GI + Q W
Sbjct: 62 MQEVQRRGIPVPDEDVAEAVQEIESRNGLPRGGLVGQLRAAGIPPRALFDQIRNQIGWSR 121
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+V+ + E+ K T EYL+ + + D+ +R +
Sbjct: 122 LVRAQLGQQAQISPAEVAEFVAAHKARTGQPEYLVSEIFIPV-DDPGAEPEV--RRFVED 178
Query: 206 EESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263
+LR +F+ + G ++ + P ++L++ NP
Sbjct: 179 VVGQLRRGVPFPAAATQFSQSQTALQGGDMGWVRGEEFDPGVASILERMPPGAIANPQRV 238
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSA 290
G + +A+ KR+ G ++A L
Sbjct: 239 PGGFQIVALRQKRETGRDLATMVTLRQ 265
>gi|85711793|ref|ZP_01042849.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
baltica OS145]
gi|85694408|gb|EAQ32350.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
baltica OS145]
Length = 432
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 53/318 (16%), Positives = 122/318 (38%), Gaps = 16/318 (5%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ +K T+ + ++ CI V+ + + R+ ++ VI + I + I +K +
Sbjct: 1 MKQLVKFSTSVSIALMMCITATVA-HAQQVLDRVAVIVDDGVILESQIEQLIKQVKQSEN 59
Query: 69 NGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
L A + LI + L+ Q E+ GI ++ + A++ G+S ++
Sbjct: 60 FSSANAPSDKVLRTQATERLIQQELQLQMAERMGIEVSEAQLDQAISRIAQDRGMSVDEL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREY 178
G F++ + + I V + + E+ + + + EY
Sbjct: 120 RENTINSGQSWPAFREQIKTEIITSQVERAAVQRRVSVTPQEVENLVNLIEQNDASPTEY 179
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYL 237
+R +L + + + KR A RL +D ++L + +S + + G ++
Sbjct: 180 RLRQILIGVDSDAPNEKQEAAKRRAQAVIDRLEEGEDFSQLAIRSSSGSNALDGGDLGWM 239
Query: 238 LESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNT 293
E+ + F ++K KS+ P + G + + DKR + + ++ + +
Sbjct: 240 TENSMPTLFAEVVKGKSKGEIIGPIRSGVGFHILQVADKRGEQVVEVQEVKARHILIKPS 299
Query: 294 PTKIEKHEAEYVKKLRSN 311
+ E + + R
Sbjct: 300 VILSDNKAKEMLAQFREQ 317
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 6/154 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A+K+ + + V+E R +L I + + + ++ + E L K +L K
Sbjct: 274 QVADKRGEQVVEVQEVKARHIL--IKPSVILSDNKAKEMLAQFREQILSGEKTFAELAKE 331
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279
S + G + +F+ + + + P+ TQ G + + D+R L
Sbjct: 332 HSADPGSASRGGDLGWSRPDRYAEEFKQRVSTLEKGVISEPFRTQFGWHIVEVTDRRTLD 391
Query: 280 GEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
K + Q K + + +++R A
Sbjct: 392 ATQESKRDKAYQMLFSRKYREEVDTWRQEMRDRA 425
>gi|114797858|ref|YP_760847.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Hyphomonas neptunium ATCC 15444]
gi|114738032|gb|ABI76157.1| PPIC-type PPIASE domain protein [Hyphomonas neptunium ATCC 15444]
Length = 415
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 95/249 (38%), Gaps = 14/249 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKL--------QKINGELEKIAVQELIVETLKKQEIE 91
I +N + I+ D+ +R LL L Q+ ++ A+++LI E L+ +
Sbjct: 35 EGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQALEQLIDEKLQLDRVS 94
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ + D ++ A G++ E L G+ ++ + + W ++
Sbjct: 95 EFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGL 154
Query: 152 FMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + E ++ +++ + +Y I + PD + + ++ S+L
Sbjct: 155 YGNRIRISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTA---AESIISQL 211
Query: 211 RLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQKGVE 268
+ D ++ +S + G ++ D+ P ++ S P T+ G+
Sbjct: 212 QQGADFRVAAQRISSAPTAAAGGDMGWVTIEDIDPTIAEAVRNSSGNGLLEPIQTENGIY 271
Query: 269 YIAICDKRD 277
I + KR+
Sbjct: 272 IILLGGKRE 280
>gi|37678664|ref|NP_933273.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016]
gi|37197404|dbj|BAC93244.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016]
Length = 443
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L++ +V + + ++ +N VI DI L+ L
Sbjct: 22 LLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQALPDADVLN 81
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+
Sbjct: 82 EQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYEE 141
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + + T EY I + D
Sbjct: 142 FREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDG- 200
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q++ ++ + K+ E + ++ + G ++ + ++ F + +K
Sbjct: 201 -QDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIK 259
Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKR 276
+++ + P+ + G + I D +
Sbjct: 260 MQNKGSIIGPFRSGVGFHILKIEDVK 285
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 103/277 (37%), Gaps = 37/277 (13%)
Query: 52 TDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
T+ + RI ++L+ + LE A + +VE LK+ G F + Y
Sbjct: 182 TNASVEYRIGHIQLRFTDGQDKSALEAQAKE--LVEKLKQ------GADFSTMAYTYSKG 233
Query: 108 QHARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A G + E+ F + +Q + F G ++I
Sbjct: 234 PKALQGGDWGWMRKEEM----------PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKI 281
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKF 222
K ++ + V E R +L P L ++G +R + R+R + +L +
Sbjct: 282 EDVK-GLETVAVTEVNARHILLK-PTVILSDEGA--QRELNEFIRRIRAGEATFGELAQQ 337
Query: 223 ASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G+ Y P+F++ ++ + P+ T G + + D+R++
Sbjct: 338 YSQDPGSAAQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVD 397
Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+K K + ++++LR+ A +
Sbjct: 398 RTDSAMKNKAYRILFNRKFNEEVGAWMQELRAGAFVE 434
>gi|152982039|ref|YP_001352108.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp.
Marseille]
gi|151282116|gb|ABR90526.1| peptidyl-prolyl cis-trans isomerase SurA [Janthinobacterium sp.
Marseille]
Length = 469
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 104/277 (37%), Gaps = 13/277 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGEL- 72
LT + + + ++ I +N EVIT D +R ++ +LQ G L
Sbjct: 26 LTCGVMAHVQAQGQTAAAVQPRLADAIIVVVNNEVITRYDFLERYKMIEARLQSQGGNLP 85
Query: 73 -----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
++ ++ +IVE + Q+ +++GI D ++ + A LS +F L++
Sbjct: 86 PREQLQRQLLERMIVERAQLQQAKETGIKIDDTMLDRAMGRIAEQNKLSMPEFRKRLEED 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVL 184
G+ + F+ + + + + + K ++EI A +E I +L
Sbjct: 146 GLVYSKFRNEIRDEMAIQRLREREVDNKVQVSDVEIDAYMAAHNAPAATAPQELHIAQIL 205
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLH 243
+P+N Q Q KR D ++L D K ++ ++ G+ + L
Sbjct: 206 IRVPENATQKQLADSKRRADEVVAQLAAGADFAKLASAYSDGTDGLTGGELGWRSAERLP 265
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
F + Q + G + + +R
Sbjct: 266 QLFVDATANLQDGQIAPIVKSGNGFHILKLLGRRTQS 302
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 57/147 (38%), Gaps = 9/147 (6%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGK 233
V++ +L + N++ + ++++ + ++ +L K S G
Sbjct: 322 VKQTHASHILIKV--NQVVSAAEARRKLLELKQRLDNKAATFEELAKLYSNDFSAAKGGD 379
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL---S 289
++ D P+F+ + + P + G I + +++ +++ +
Sbjct: 380 LGWIYPGDTVPEFERAMDALPIGQVSEPIESPFGYHLILVTERK--SDDVSQERQRMIAR 437
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K+E+ ++++++R A + Y
Sbjct: 438 QAIREQKVEEATQDWLRQVRDRAYVEY 464
>gi|254429963|ref|ZP_05043670.1| SurA N-terminal domain family [Alcanivorax sp. DG881]
gi|196196132|gb|EDX91091.1| SurA N-terminal domain family [Alcanivorax sp. DG881]
Length = 442
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 101/283 (35%), Gaps = 12/283 (4%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NG 70
+ + ++P S M RI +N I ++ +RI + LQ
Sbjct: 21 GLLAMAVLMLPAWSQAKVQMLDRIVAVVNDGAIMASELDERINTIALQFQEKGQQLPPPA 80
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ + + +++E L+ Q E+ GI D ++N AR G+S EDF++ L + G
Sbjct: 81 VMREQVLDRMVLERLQLQLAERGGIKVDDASLNQALAGIARQNGMSLEDFAAALRQDGYD 140
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIP 188
F++ + + + + + + E+ + + K + ++ + +L +P
Sbjct: 141 WPQFREQIREDMVISRLQQRSVASRIQVTDREVDRFLSSELGKQMFQEDFHLGHILVRVP 200
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ ++ +L D +L + + G + F
Sbjct: 201 AEASPEDVTQARSKAESIVKKLNDGGDFQQLAVAESDGPKALEGGDLGSRPAAQWPTLFA 260
Query: 248 N-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ + + P + G + + D++ ++ + +
Sbjct: 261 ENAINLQKGEISEPLRSGAGFHILKMIDRKGGSEKVVTQYQVR 303
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 54/149 (36%), Gaps = 6/149 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI--KDAEESRLRLPKDCNKLEKFA 223
+++ V +Y +R VL Q Q + + +
Sbjct: 288 DRKGGSEKVVTQYQVRHVLIKTDALTSAEQAHKQAIRLHDEIAAGERQFSDTAAEFSDDP 347
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
S G+ ++ + ++ P+F++++ + + + +Q G ++ + D RD
Sbjct: 348 GSAR--SGGELGWVNKGEMVPEFEDMMLNTPVGELSPVFESQFGWHFLRVDDVRDADMSA 405
Query: 283 ALKAYLSAQNTPT-KIEKHEAEYVKKLRS 310
+ + Q + E+ +V++ RS
Sbjct: 406 EFRRMQATQALQKRRFEEELETWVQEKRS 434
>gi|121956507|sp|Q7MP84|SURA_VIBVY RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 428
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L++ +V + + ++ +N VI DI L+ L
Sbjct: 7 LLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQALPDADVLN 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+
Sbjct: 67 EQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYEE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + + T EY I + D
Sbjct: 127 FREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDG- 185
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q++ ++ + K+ E + ++ + G ++ + ++ F + +K
Sbjct: 186 -QDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIK 244
Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKR 276
+++ + P+ + G + I D +
Sbjct: 245 MQNKGSIIGPFRSGVGFHILKIEDVK 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 103/277 (37%), Gaps = 37/277 (13%)
Query: 52 TDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
T+ + RI ++L+ + LE A + +VE LK+ G F + Y
Sbjct: 167 TNASVEYRIGHIQLRFTDGQDKSALEAQAKE--LVEKLKQ------GADFSTMAYTYSKG 218
Query: 108 QHARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A G + E+ F + +Q + F G ++I
Sbjct: 219 PKALQGGDWGWMRKEEM----------PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKI 266
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKF 222
K ++ + V E R +L P L ++G +R + R+R + +L +
Sbjct: 267 EDVK-GLETVAVTEVNARHILLK-PTVILSDEGA--QRELNEFIRRIRAGEATFGELAQQ 322
Query: 223 ASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G+ Y P+F++ ++ + P+ T G + + D+R++
Sbjct: 323 YSQDPGSAAQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVD 382
Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+K K + ++++LR+ A +
Sbjct: 383 RTDSAMKNKAYRILFNRKFNEEVGAWMQELRAGAFVE 419
>gi|270263924|ref|ZP_06192192.1| chaperone SurA, precursor [Serratia odorifera 4Rx13]
gi|270042117|gb|EFA15213.1| chaperone SurA, precursor [Serratia odorifera 4Rx13]
Length = 432
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 100/276 (36%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K T + ++ C ++ + ++ ++ V+ + D++ + +KL
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLESDVNSLLQSVKLNAQQAGQ 58
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GI ++ A +S + S L
Sbjct: 59 QLPDDATLRHQILERLIMDNIQLQMAKKMGIAVSDADLDKAIGNIAAQNKMSIDQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
+G+ N ++ + + + +V N+ + L E+ A + +N + E I
Sbjct: 119 AYEGLNYNTYRSQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGAQNGSDTEMNISH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + D KL S G + +
Sbjct: 179 ILIPLPENPSQQQVDEAEALAKKLMGEINGGADFGKLAISYSADSQALKGGNMGWGKLQE 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F L + + P + G + + D R
Sbjct: 239 IPTLFAERLASAKKGDVVGPIRSGVGFHILKVNDIR 274
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 4/149 (2%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ ++++V E R +L P L + K AE + K ++ ++ +
Sbjct: 274 RGANQSVSVTEVHARHILLK-PSVVLTDDQARAKLQAVAEAIKSGNAKFADEAKQLSQDP 332
Query: 227 HDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G + P F++ L+K ++ + P + G I + D R + A
Sbjct: 333 GSALQGGDLGWASPDIYDPAFRDALMKLNKGEVSKPVHSSFGWHLIQLLDTRQVDKTDAA 392
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R+ A
Sbjct: 393 QKDRAYRMLFNRKFAEEAQTWMQEQRAQA 421
>gi|107099580|ref|ZP_01363498.1| hypothetical protein PaerPA_01000593 [Pseudomonas aeruginosa PACS2]
gi|313111760|ref|ZP_07797553.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
39016]
gi|310884055|gb|EFQ42649.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas aeruginosa
39016]
Length = 404
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 107/287 (37%), Gaps = 15/287 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALL--KLQKINGELE------KIAVQELIVETLKKQEIE 91
R+ ++ +VI + +R+ + L K L + ++ LI+E +++Q +
Sbjct: 5 DRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVLTQQVLERLIIENIQQQIGD 64
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+SGI +N A+ G+S E F + L + G+ ++ + + + V +
Sbjct: 65 RSGIRISDEELNQAMGTIAQRNGMSLEQFQAALTRDGLSYADAREQVRREMVISRVRQRR 124
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E E+ K EY + +L +P+ + R +
Sbjct: 125 VAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEAASSDVIQAAARQAQELYQQ 184
Query: 210 LRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
L+ D +L ++ + + G+ + + L F +++ + T P T G
Sbjct: 185 LKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSLAVGDVTEPVRTPGGF 244
Query: 268 EYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +KR + ++ + + + E + +KL
Sbjct: 245 IILKLEEKRGGSKMVRDEVHVRHILLKPSEIRSEAETEKLAQKLYER 291
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 58/154 (37%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ + E +R +L + +++ R++ +D +L K S+
Sbjct: 251 EKRGGSKMVRDEVHVRHILLKPSE---IRSEAETEKLAQKLYERIQSGEDFGELAKSFSE 307
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G ++ L P+F+ ++ Q + P+ +Q G + + +R E
Sbjct: 308 DPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSE 367
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ +++++R A +
Sbjct: 368 KFREQQAVSVLRNRKYDEELQAWLRQIRDEAYVE 401
>gi|90580797|ref|ZP_01236600.1| putative survival protein SurA [Vibrio angustum S14]
gi|90438065|gb|EAS63253.1| putative survival protein SurA [Vibrio angustum S14]
Length = 433
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 124/314 (39%), Gaps = 15/314 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+K + ++ + S + ++ T+N VI D+S + ++L
Sbjct: 1 MKTWKYSVLSLMMMGMSATSMAAPQELDQVVMTVNDGVILQSDVSAMLKTVRLNAAEEHQ 60
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
N L + + +LI+E L+ Q+ ++ GI D + ++ A+ +S + L
Sbjct: 61 QLPPNNILRQQVMDQLILENLQIQQAQQLGIRIDDSQLDQAIADVAKQRNMSVDQLRQSL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
K G+ + F++ + + + + E+E A + + +Y I
Sbjct: 121 AKAGVSYSMFREQMRNDMLASEARTIIVRKRVNVLPQEVESLAKQMAEQTQQNVQYNISQ 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + ++ + + K+ + ++L+ + ++L +++ + G+ ++ +++
Sbjct: 181 IQIRVDEDADKAERDKAKQEAEDIVAQLKKGANFSQLAYRYSKGPKALKGGEWGWMSKAE 240
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297
+ F + ++ ++ P+ + G + I D + + ++ + +
Sbjct: 241 MPTVFADQIQNNGKDAIIGPFRSGVGYHILKINDVKGMPSVSVVEVKARHILIKPSMILS 300
Query: 298 EKHEAEYVKKLRSN 311
+ ++K+R +
Sbjct: 301 DAAAKAELEKIRQS 314
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
M +++V E R +L I + + + + ++ +S + + K S+
Sbjct: 277 GMPSVSVVEVKARHIL--IKPSMILSDAAAKAELEKIRQSIISGKQTFAAAAKAYSEDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + + P F++ ++ + + P+ + G + + +R + + A+
Sbjct: 335 SAANGGQLGWQVPDMYAPAFKDKVETLPVDKISEPFKSTFGWHIVEVEGRRKVDRTDAAM 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K + K + ++++LR+ A I
Sbjct: 395 KNRAAQIIFNRKFNEEAQTWLQELRAGAYIE 425
>gi|84393693|ref|ZP_00992443.1| parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus 12B01]
gi|84375692|gb|EAP92589.1| parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus 12B01]
Length = 431
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 103/275 (37%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+ L + I VSY + ++ +N VI DI + L+
Sbjct: 1 MTLWKRTLIAIAAACTVSVSYAAPVELDSVKVIVNEGVILQSDIDASMKTLRANAKKSGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++T++ QE E+ G+ D ++ A++ + E ++ +
Sbjct: 61 TLPSQDVLNEQVLEKLIIDTIQTQEAERIGVRIDDARLDQAIEGIAKDNNQTVEQLTASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
++G+ N F++ + + + + L E+ + T +Y I
Sbjct: 121 AEEGLSYNAFREQVRKEIAASEARNALVRRRINILPAEVDNLADILAQETNATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ N Q + ++ + K+ E ++ + G ++ + ++
Sbjct: 181 IQLRF--NDDQTKEELEAQAKEVVEELNSGKDFSTMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ + P+ + G + I D +
Sbjct: 239 PTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 273
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + ++++++ +L + S+ ++ G+ Y P+F++
Sbjct: 294 VILSDYGAKEQLEEITRRVNAGEASFGELAQQYSQDPGSAVQDGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + +++
Sbjct: 354 QVETLPEGKISAPFKTVHGWHIVEVLDRREVDRTDSALKNKAYQILFNRKFNEEAGAWLQ 413
Query: 307 KLRSNAIIH 315
++R++A +
Sbjct: 414 EVRASAFVE 422
>gi|307132630|ref|YP_003884646.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Dickeya dadantii
3937]
gi|306530159|gb|ADN00090.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Dickeya dadantii
3937]
Length = 430
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGE 71
+++ + +++ + ++I ++ V+ + DI+ + +KL +
Sbjct: 6 ALVLGLALSANMAFAAPQEVNKIAAVVDNSVVLESDINSLLQSVKLNAQEAGQQLPDDAT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ LI++ + Q +K G+ ++ A +S + S L +G+
Sbjct: 66 LRHQILERLIMDNIILQMAQKMGVQVTDEQLDRSIANIAAQNRMSVDQLRSRLAAEGVSF 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPD 189
+ ++ + I +V ++ + L E+ + Q + + E + +L +P+
Sbjct: 126 DTYRSQIRKDMIIAEVRNSEVRRRVTVLPQEVDSLAQQIASQGASGPEVNLSQILIPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q+Q + + + D KL S G+ + +L F
Sbjct: 186 NPTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQELPSLFAE 245
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L Q P + G + + D R
Sbjct: 246 RLTNPQKGQVIGPIRSGVGFHILRVNDTR 274
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 82/299 (27%), Gaps = 65/299 (21%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFL------- 124
+++I+ ++ E+ + +T V+ Q A E + S L
Sbjct: 129 RSQIRKDMIIAEVRNSEVRRR-VTVLPQEVDSLAQQIASQGASGPEVNLSQILIPLPENP 187
Query: 125 ------------------DKQGIG-----------DNHFKQYLAIQSIWPD--------- 146
QG K Q W
Sbjct: 188 TQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKG---GQMGWGRPQELPSLFA 244
Query: 147 ---------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
V G + + + ++++V E R +L + + N
Sbjct: 245 ERLTNPQKGQVIGPIRSGVGFHILRVNDTRGGDQSVSVTEVHARHILLRT--SVVMNDAQ 302
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQ 254
+ R++D K S+ + G + P F++ L + +
Sbjct: 303 ARARLEDIASQIKSGKLSFTNAAKQLSQDPGTANQGGDLGWSSPDMYDPSFRDALTQLKK 362
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + ++++ R+ A
Sbjct: 363 GEISAPVHSSFGWHLIQLLDTRQVDKTDAAQKDRAYRMLFNRKFAEEAQTWMQEKRAAA 421
>gi|220935878|ref|YP_002514777.1| SurA domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219997188|gb|ACL73790.1| SurA domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 443
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/322 (15%), Positives = 117/322 (36%), Gaps = 23/322 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR--------IRTTINGEVITDGDISKRIALLK 64
I++ T F+L + +++ ++ R I + +VI ++ R+ ++
Sbjct: 2 IEIRNTLFLLSAMALTLALAWPLQGLAQRADDAPLDHIVALVEDDVIMHSELQNRLDTVR 61
Query: 65 --LQKINGELEK------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+ G L ++ LI+E L+ Q+ ++GI D T+N + AR +S
Sbjct: 62 QQILSRGGRLPPDDVLIPQVLERLIIERLQLQQATRAGIRIDDITLNQTMERIARENSMS 121
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+F L GI F++ + + + + + E EI R
Sbjct: 122 LPEFRDRLVADGIDFQVFREQIRDEMTIGQLRRRQVENRIQVSEQEIDDLIASESGAIDR 181
Query: 177 --EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGK 233
EY + +L +P+ + +A R ++ ++L ++ + G
Sbjct: 182 DVEYRLSHILVPLPEGANAADIQAARERAEAIRKRAVAGENFSELALSESAGQQALEGGD 241
Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLS 289
+ + + F +N++ + + + G I + ++R ++
Sbjct: 242 LGWRAAAQVPTLFARNVVLMREGEVSELIRSPSGFHLIKLQERRGGERAQITQTHARHIL 301
Query: 290 AQNTPTKIEKHEAEYVKKLRSN 311
Q T ++ E + LR+
Sbjct: 302 IQPTAILSQEDARERIAGLRNR 323
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
++ + + + R +L I + +Q ++RI R+ + D L + S
Sbjct: 282 QERRGGERAQITQTHARHIL--IQPTAILSQEDARERIAGLRN-RILMGNDFADLARAHS 338
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G + DL PQF+ ++ + N + P+++ G + + D+R
Sbjct: 339 DDRGSAMRGGDLGWTDPGDLVPQFEEVMNALAPNTLSEPFLSPFGWHIVEVLDRRTYDSS 398
Query: 282 IA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++A K E+ ++++LR A +
Sbjct: 399 RQLMRAQAREIIRERKREEETELWLRRLRDEAYVE 433
>gi|82701654|ref|YP_411220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira
multiformis ATCC 25196]
gi|122070651|sp|Q2YBP3|SURA_NITMU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|82409719|gb|ABB73828.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira
multiformis ATCC 25196]
Length = 440
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 49/323 (15%), Positives = 119/323 (36%), Gaps = 19/323 (5%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-ALLK 64
+S S F T +L I ++ I +N VIT ++ + + A+LK
Sbjct: 5 LSSRSPFSLPFLT--LLAGMAIAQQPAHSGVETIDHIVAVVNENVITRHELDEMLGAMLK 62
Query: 65 LQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+ G LEK ++ +I+ ++ Q ++G+T ++ + A+ +S
Sbjct: 63 QLQKQGVQPPPPAVLEKQLLERIILNRVQLQLANETGLTVSDAELDQTLRRIAQENKMSL 122
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITV 175
++F L + G+ + F+ + + I + + + + E E+ Q+
Sbjct: 123 QEFDRALAEDGVSFSKFRDEIRDEIILVRLKEREVSNRVSVTEGEVDHFLETQEDSPSQS 182
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK-A 234
EY I +L + + + ++ ++ ++L+ + ++ S D G
Sbjct: 183 DEYRIAHILIQVSEGADPLKRDAARQRAESALAKLKAGTEFAQVAAEFSDAPDAMEGGLL 242
Query: 235 QYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRD-----LGGEIALKAYL 288
+ + L +F +L T + G + + ++R+ + ++
Sbjct: 243 NWRPAAQLTKKFAEILTPMKPGEITGIIPSPNGFHILKLVERRNQDTVTTMIDQTHARHI 302
Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311
+ + E V +L+
Sbjct: 303 LIKISELTSEADAHRRVTELKER 325
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 6/157 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ Q + + R +L I + L ++ +R+ + +E K +
Sbjct: 282 VERRNQDTVTTMIDQTHARHILIKISE--LTSEADAHRRVTELKERLDNGSKFEELAKLH 339
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLG 279
+ + G ++ D P+F+ + ++P + G I + ++R D+
Sbjct: 340 SEDASAPTGGDLGWISPGDTVPEFEQAMSALKPGEISSPVQSPFGWHLIQVIERRTQDVS 399
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
E + K E E++++LR A + Y
Sbjct: 400 QER-KRQSARQAIRARKAETAFQEWLQRLRDRAYVEY 435
>gi|294012540|ref|YP_003546000.1| peptidyl-prolyl cis-trans isomerase SurA [Sphingobium japonicum
UT26S]
gi|292675870|dbj|BAI97388.1| peptidyl-prolyl cis-trans isomerase SurA [Sphingobium japonicum
UT26S]
Length = 461
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 14/270 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ L ++ LI ETL+ QE + I
Sbjct: 73 AIVNGRIITGTDVDQRLALIITANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 132
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D ++ + + A N S F +L +QG K+ + + W +++ +
Sbjct: 133 VDKAEIDQSYERVAANFRQSPAQFDQYLRQQGSSSASIKRQIEGELAWSRLLRRNIQPFV 192
Query: 157 GNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ + +M E+ I + + P+N+ Q + I ++
Sbjct: 193 NVSEDEVKSVVDRMNAAKGSDEFRIGEIYLSATPENQQQIIANARNIIDQIKQG----GS 248
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
+F+ G ++ L + + Q P GV I +
Sbjct: 249 FAAYARQFSEASTAAVGGDLGWVRPVQLPDELAQAAAEMQVGQIAGPIGVPGGVSIIYVM 308
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
DKR + A LS + +
Sbjct: 309 DKRKVLTADPRDALLSLKQLSVSFPAGTTK 338
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 7/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
A + + + ++ + K + ++ + S P + Q
Sbjct: 281 AQAAAEMQVGQIAGPIGVPGGVSIIYVMDKRKVLTADPRDALLSLKQLSVSFPAGTTKEQ 340
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
A ++++ K C + + KI + + DL PQ Q++L Q
Sbjct: 341 AST---RAAAFAAQVKAVKGCGQANELGGKI-GADVVDNDNVKLRDLPPQLQDILLNLQV 396
Query: 255 NNTTNPY-VTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNA 312
T P+ GV + +C + + A A + AQ ++ K Y++ LR +A
Sbjct: 397 GEATPPFGSINDGVRVLVVCGRDEASSAAAPNAEQIMAQLEEERVNKRARIYLRDLRRDA 456
Query: 313 IIHY 316
+I Y
Sbjct: 457 VIDY 460
>gi|224827238|ref|ZP_03700332.1| SurA domain protein [Lutiella nitroferrum 2002]
gi|224600527|gb|EEG06716.1| SurA domain protein [Lutiella nitroferrum 2002]
Length = 428
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 98/262 (37%), Gaps = 12/262 (4%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVET 84
RI +N IT+ D+ KRI ++ L + ++++I E
Sbjct: 21 AAPVRAVDRIVAVVNKSAITESDLQKRIKETVMELEARKVTPPAPDVLARQVLEQMITEE 80
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
++ Q +G+ + + + A L+ E + L K+G+ ++F++ + Q +
Sbjct: 81 VQVQYATSNGVRVSDDELQQTLERLASQNKLTLEAMKAQLAKEGVTFDNFREQIRRQILL 140
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + + + + E+ + + EY + +L S+P+ Q Q +
Sbjct: 141 SRLKEREVESRVNVSDTEVEQVLKSEQTANRSEYRLANILVSVPERADAKQIDAQSQKAH 200
Query: 205 AEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262
+ L + K ++ + + G + S L F LL+ + T
Sbjct: 201 KALAELDAGQPFAKVAAAYSDAPNGLKGGDLGWRPASSLPLDFTKLLETMQPGSHTTVIR 260
Query: 263 TQKGVEYIAICDKRDLGGEIAL 284
+Q+G + +KR + L
Sbjct: 261 SQQGFFIFQLQEKR--SADTPL 280
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 6/154 (3%)
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
++ + + V +Y +R +L N+ ++ + R+ + R +
Sbjct: 269 QLQEKRSADTPLIVEQYHVRHILLRT--NEAVSEADAKTRLLQIRDRIERGASFEEMAKL 326
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--DL 278
++ + G ++ D P F+ + N + P + G I + KR D+
Sbjct: 327 YSEDASNTRGGDLGWVNLGDTVPTFEQAMTSLPLNTVSQPVRSPFGWHLIKVEGKRTQDV 386
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ K + Q KI++ ++V++LR +A
Sbjct: 387 AQDR-EKMMVKQQIRARKIDEAYLDWVRQLRDSA 419
>gi|293392898|ref|ZP_06637215.1| peptidylprolyl cis-trans isomerase SurA [Serratia odorifera DSM
4582]
gi|291424432|gb|EFE97644.1| peptidylprolyl cis-trans isomerase SurA [Serratia odorifera DSM
4582]
Length = 433
Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 101/276 (36%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K T + ++ C ++ + ++ ++ V+ + D++ + +KL
Sbjct: 1 MKNWRTLILGLVVCANA--AFAAPQEVDKVAAVVDNGVVLESDVNGLLQSVKLNAQQAGQ 58
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GI ++ A +S + S L
Sbjct: 59 QLPDDKTLRHQILERLIMDNIQLQMAKKMGINVTDADLDKAIGNIAAQNRMSIDQLRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
+G+ N ++ + + + +V N+ + L E+ A + +N + E I
Sbjct: 119 AYEGLNYNTYRSQIRKEMLITEVRNNEVRRRVTILPQEVDALAKQVGAQNGSDTEMNISH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + D KL S G + +
Sbjct: 179 ILIPLPENPSQQQVDEAETLAKRLIGEINSGADFGKLAITYSADSQALKGGNMGWGKLQE 238
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ F L+ + + P + G + + D R
Sbjct: 239 IPTLFAERLVSAKKGDVVGPIRSGVGFHILKVNDLR 274
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 97/328 (29%), Gaps = 66/328 (20%)
Query: 48 GEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+ I + R+++ +L+ +E+++ ++ E+ + +T
Sbjct: 97 DKAIGNIAAQNRMSIDQLRSRLAYEGLNYNTYRSQIRKEMLITEVRNNEVRRR-VTILPQ 155
Query: 101 TVNYFFVQHARNTGLSAE-DFSSFL-------DKQGIG-DNHFKQYLAIQ---------- 141
V+ Q G E + S L +Q + + L +
Sbjct: 156 EVDALAKQVGAQNGSDTEMNISHILIPLPENPSQQQVDEAETLAKRLIGEINSGADFGKL 215
Query: 142 ---------------SIWP-----------DVVKNDFMLKYGNLEM-------EIPANKQ 168
W +V G + ++ +
Sbjct: 216 AITYSADSQALKGGNMGWGKLQEIPTLFAERLVSAKKGDVVGPIRSGVGFHILKVNDLRG 275
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++I+V E R +L + + + ++++ + K S+
Sbjct: 276 ASQSISVTEVHARHILLK--PSVVMTDDQARAKLEEVAAAVKSGKAKFADEAKQLSQDPG 333
Query: 229 VS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+ G + P F++ LLK + + P + G I + D R + A +
Sbjct: 334 SALQGGDLGWASPDIYDPAFRDALLKLQKGEVSQPVHSAFGWHLIQLLDTRQVDKTDAAQ 393
Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + K + ++++ R+ A
Sbjct: 394 KERAYRMLFNRKFAEEAQTWMQEQRAAA 421
>gi|217969876|ref|YP_002355110.1| SurA domain protein [Thauera sp. MZ1T]
gi|217507203|gb|ACK54214.1| SurA domain protein [Thauera sp. MZ1T]
Length = 438
Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats.
Identities = 52/308 (16%), Positives = 111/308 (36%), Gaps = 17/308 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------L 72
+ +P+ S RI +N EVIT ++ RI + Q L
Sbjct: 16 LAATTLALPVHSAPRAVEVDRIVAVVNNEVITGLELRARIEQTRRQLARQGAQLPPEEVL 75
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ ++ LIVE + Q +S + D T++ + A N LS + + L+K G+ +
Sbjct: 76 QRQLLERLIVERAQLQLARESSLRVDDVTLDRAIERIASNNKLSIDQLRATLEKDGVTWS 135
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNK 191
F+ + + + + + + + + EI + +E+ + +L P+
Sbjct: 136 RFRDEIRSEILLTRLREREVDSRIVVTDAEIDNFIANNPDAFSGQEFAVAHILLRTPEGA 195
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLL 250
Q R + +RLR +D ++ S D G + L F + +
Sbjct: 196 SPQQVEAVARRAEQVMARLRSGEDFARVAAEVSDAPDGLQGGSLGWRPLDRLPALFADAV 255
Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGG------EIALKAYLSAQNTPTKIEKHEAE 303
++ T+ + G+ + + D R G E ++ + + +
Sbjct: 256 RRMRPGETSPVLRSAAGLHIVRLVDARGGGAAAVQKLEQTRARHILIKTSEVLSDADAEA 315
Query: 304 YVKKLRSN 311
+ +R
Sbjct: 316 RLLAIRER 323
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 55/169 (32%), Gaps = 6/169 (3%)
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + + + R +L + + + + R+ E +
Sbjct: 268 RSAAGLHIVRLVDARGGGAAAVQKLEQTRARHILIKTSE--VLSDADAEARLLAIRERVV 325
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEY 269
+ ++ + G +L D P+F+ + + P + G
Sbjct: 326 NGADFAELAKASSADLSAARGGDLGWLNPGDTVPEFERAMNALRPGEVSAPVRSPFGWHL 385
Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + ++R D+ E +A K E+ +++++LR + + Y
Sbjct: 386 IQLVERRMQDVTDER-KRAAARQALRERKAEQAYEDWLRQLRDSTYVDY 433
>gi|238764654|ref|ZP_04625599.1| Chaperone surA [Yersinia kristensenii ATCC 33638]
gi|238697146|gb|EEP89918.1| Chaperone surA [Yersinia kristensenii ATCC 33638]
Length = 424
Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 98/264 (37%), Gaps = 12/264 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GELEKIA 76
+ ++ + ++ ++ V+ D+ + + L Q L
Sbjct: 1 MVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQEVPDDATLRHQI 60
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ LI++ ++ Q +K GIT ++ A ++ + S L G+ + +++
Sbjct: 61 LERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPDQMRSRLAADGLNYDTYRE 120
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITV-REYLIRTVLFSIPDNKLQN 194
+ + + +V N+ + L E+ A KQ + E + +L +P+N Q
Sbjct: 121 QIRKEMLTSEVRNNEVRRRITILPQEVEALAKQVGNQTSGDTELNLSHILIPLPENPSQQ 180
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKS 253
Q + + + S ++ D KL S G+ + +L F L+ +
Sbjct: 181 QVDQAEDVANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAERLQSA 240
Query: 254 -QNNTTNPYVTQKGVEYIAICDKR 276
+ + P + G + + D R
Sbjct: 241 NKGDVVGPIRSGVGFHILKVNDIR 264
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ A L ++ DF K Q W +
Sbjct: 176 NPSQQQVDQA-EDVA--NKLVSDIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 229
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
V G +++ + ++V E R +L + +
Sbjct: 230 PSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIRGGDNTVSVTEVHARHILLK--PSPV 287
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-L 249
+ ++ A D + K S+ + G + P F++ L
Sbjct: 288 MTDDQARAKLAAAAADIKSGKTDFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDAL 347
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 348 MKLKKGEISTPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQ 407
Query: 309 RSNA 312
R+ A
Sbjct: 408 RAAA 411
>gi|320157503|ref|YP_004189882.1| survival protein SurA (Peptidyl-prolyl cis-trans isomerase SurA)
[Vibrio vulnificus MO6-24/O]
gi|319932815|gb|ADV87679.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase SurA) [Vibrio vulnificus MO6-24/O]
Length = 432
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L++ +V + + ++ +N VI DI L+ L
Sbjct: 11 LLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQALPDADVLN 70
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+
Sbjct: 71 EQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYAE 130
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + + T EY I + D
Sbjct: 131 FREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDG- 189
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q++ ++ + K+ E + ++ + G ++ + ++ F + +K
Sbjct: 190 -QDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIK 248
Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKR 276
+++ + P+ + G + I D +
Sbjct: 249 MQNKGSIIGPFRSGVGFHILKIEDVK 274
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 103/277 (37%), Gaps = 37/277 (13%)
Query: 52 TDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
T+ + RI ++L+ + LE A + +VE LK+ G F + Y
Sbjct: 171 TNASVEYRIGHIQLRFTDGQDKSALEAQAKE--LVEKLKQ------GADFSTMAYTYSKG 222
Query: 108 QHARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A G + E+ F + +Q + F G ++I
Sbjct: 223 PKALQGGDWGWMRKEEM----------PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKI 270
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKF 222
K ++ + V E R +L P L ++G +R + R+R + +L +
Sbjct: 271 EDVK-GLETVAVTEVNARHILLK-PTVILSDEGA--QRELNEFIRRIRAGEATFGELAQQ 326
Query: 223 ASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G+ Y P+F++ ++ + P+ T G + + D+R++
Sbjct: 327 YSQDPGSAAQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVD 386
Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+K K + ++++LR+ A +
Sbjct: 387 RTDSAMKNKAYRILFNRKFNEEVGAWMQELRAGAFVE 423
>gi|307825062|ref|ZP_07655283.1| SurA domain protein [Methylobacter tundripaludum SV96]
gi|307733810|gb|EFO04666.1| SurA domain protein [Methylobacter tundripaludum SV96]
Length = 434
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 117/312 (37%), Gaps = 16/312 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71
+ V+ + C + S+ A I + +VI + ++ K +A+++ +
Sbjct: 7 IKRTIVVALLCNLLFGSFLVHAEVLDTIIAVVEEDVILERELQKEVAVIEQRIQQSNAAI 66
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L K ++++IV+ L++Q EK+GIT +N AR + E F + L+
Sbjct: 67 PPAYVLRKQVLEKMIVDKLQRQLAEKAGITVSEEMLNSSAADIARRNNMDIEQFRAELEG 126
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVL 184
QGI F + + I + + + + E+ + I +Y + +L
Sbjct: 127 QGISYQSFLDNMRNEIIINQLRGREIGGRIKVTDREVEHYMETQDKIGEESTQYHLGHIL 186
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLH 243
++ + + + LR +D ++ + + + G + S++
Sbjct: 187 IAVKEGASSTEIQKAMSKAEGIVGSLRGGQDFSQTAISDSDDANALKGGDLGWRTLSEVP 246
Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK---IEK 299
F N +++ Q + + P + G + + + + + K + T +
Sbjct: 247 TLFVNEIRQMKQGDVSEPIRSPSGFHIVKMLELKGTDNHMITKTKVRHILIKTNELVDDA 306
Query: 300 HEAEYVKKLRSN 311
+ + L++
Sbjct: 307 EANKRLLALKAR 318
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 7/157 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ N + + +R +L N+L + KR+ A ++R+ D L + S
Sbjct: 277 LELKGTDNHMITKTKVRHILIKT--NELVDDAEANKRL-LALKARIADGDDFAALARAHS 333
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G ++ DL F+ ++K N ++P TQ G I + + +
Sbjct: 334 DDKGSALKGGSLDWVGPGDLVKPFEEAMVKLGINEVSDPVQTQFGWHIIQVLGRENKDDS 393
Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K L KIE+ +V++LR A + Y
Sbjct: 394 SEFKKNLVREAIRKRKIEEETELWVRRLRDEAFVEIY 430
>gi|326423746|ref|NP_759646.2| survival protein SurA [Vibrio vulnificus CMCP6]
gi|121956501|sp|Q8DED4|SURA_VIBVU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|319999108|gb|AAO09173.2| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Vibrio vulnificus CMCP6]
Length = 428
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L++ +V + + ++ +N VI DI L+ L
Sbjct: 7 LLLGMLVTGSAVSAPVELDKVAVIVNDGVILQSDIDTATKTLRANAKKSGQALPDADVLN 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ V +LI++TL+ QE ++ G+ D +N + ARN + ++ S+ + +G+
Sbjct: 67 EQIVDKLIIDTLQTQEADRIGVRIDDTRLNQAIEEIARNNNQTIDELSAAIASEGVSYAE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + + T EY I + D
Sbjct: 127 FREQIRKEMAASEARNALVRRRINILPAEVDNLAELLSKETNASVEYRIGHIQLRFTDG- 185
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q++ ++ + K+ E + ++ + G ++ + ++ F + +K
Sbjct: 186 -QDKSALEAQAKELVEKLKQGADFSTMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIK 244
Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKR 276
+++ + P+ + G + I D +
Sbjct: 245 MQNKGSIIGPFRSGVGFHILKIEDVK 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 103/277 (37%), Gaps = 37/277 (13%)
Query: 52 TDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
T+ + RI ++L+ + LE A + +VE LK+ G F + Y
Sbjct: 167 TNASVEYRIGHIQLRFTDGQDKSALEAQAKE--LVEKLKQ------GADFSTMAYTYSKG 218
Query: 108 QHARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A G + E+ F + +Q + F G ++I
Sbjct: 219 PKALQGGDWGWMRKEEM----------PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKI 266
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKF 222
K ++ + V E R +L P L ++G +R + R+R + +L +
Sbjct: 267 EDVK-GLETVAVTEVNARHILLK-PTVILSDEGA--QRELNEFIRRIRAGEATFGELAQQ 322
Query: 223 ASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G+ Y P+F++ ++ + P+ T G + + D+R++
Sbjct: 323 YSQDPGSAAQDGELGYQTPDLYVPEFKHQVETLPVGTISEPFKTVHGWHIVEVLDRREVD 382
Query: 280 -GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+K K + ++++LR+ A +
Sbjct: 383 RTDSAMKNKAYRILFNRKFNEEVGAWMQELRAGAFVE 419
>gi|322417707|ref|YP_004196930.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
gi|320124094|gb|ADW11654.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
Length = 319
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 114/316 (36%), Gaps = 15/316 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------Q 66
K++ +L + + P ++ S I +N EVIT D+ + AL++
Sbjct: 2 AKIIMACTLLALLAVTPTFAHAKP--ISGIAAIVNDEVITSTDVDREYALMQKEAEKLPA 59
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L+ A+ L+ + L +Q+I + I V + L+ E L
Sbjct: 60 SEKMGLKSAALNRLVDKKLVEQKIRELDIKVSDEDVRLAIEDVKKQNNLTQEALEQALAT 119
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVL 184
QG+ ++ L Q ++ + K E E+ + + R +
Sbjct: 120 QGLTFAQYQVQLKEQLERMRLMSQEVRSKIQVGEREMREYYESHRADYGGSETFHARHIF 179
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
F + +++ ++ R +D +L K S+ + G SD+
Sbjct: 180 FKVDPKASAEDAAKAEKLAGEVLAKARAGEDFAELAKKYSQDPSAAKDGGDLGTFKRSDM 239
Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEK 299
P+ + + + ++ + G+ I + K G +K + Q K ++
Sbjct: 240 LPEIGDTVAAMKPGDVSSIVSSPAGLHIIKLEQKSQEKGRSFEEVKDSIEEQLYKKKSDE 299
Query: 300 HEAEYVKKLRSNAIIH 315
++VK+LR+ A I
Sbjct: 300 RFNQWVKELRNAASID 315
>gi|238752276|ref|ZP_04613756.1| Chaperone surA [Yersinia rohdei ATCC 43380]
gi|238709544|gb|EEQ01782.1| Chaperone surA [Yersinia rohdei ATCC 43380]
Length = 434
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 102/283 (36%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
G L ++ LI++ + Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDGTLRHQVLERLIMDNILLQMAKKMGITVSDEALDKAIADIAAQNRMTPAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEELAKKLASDIKAGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + P + G + + D R G +
Sbjct: 239 LPSLFAERLQSAKKGDIVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 68/242 (28%), Gaps = 31/242 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----- 147
V+ + A+ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EELAKKLASDIKAGADFGKLAIANSADSQALKG---GQMGWGKLQELPS 241
Query: 148 -------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ G +++ + K ++V E R +L + +
Sbjct: 242 LFAERLQSAKKGDIVGPIRSGVGFHILKVNDIRGADKTVSVTELHARHILLK--PSPVMT 299
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLK 251
+ ++ A + K S+ + G + P F++ ++K
Sbjct: 300 DDQARAKLSAAAADIKSGKASFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDAVMK 359
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRS 310
+ + P + G I + D R + A + + + K + ++++ R+
Sbjct: 360 LQKGEISAPVHSSFGWHLIQLVDSRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRA 419
Query: 311 NA 312
A
Sbjct: 420 AA 421
>gi|313200363|ref|YP_004039021.1| sura domain-containing protein [Methylovorus sp. MP688]
gi|312439679|gb|ADQ83785.1| SurA domain protein [Methylovorus sp. MP688]
Length = 438
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 112/280 (40%), Gaps = 22/280 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQ-KING 70
L L ++P V+ + S RI ++ V+T+ +++ RI ++ Q + G
Sbjct: 7 LMAGLFLWAGALLPHVAIAAQDGSVNKIDRIVAVVDQGVVTEKELNDRIEIVSAQLEKQG 66
Query: 71 E-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
LEK ++ LI + L+ Q ++G+ D + ++ ++ A + +F
Sbjct: 67 NQLPPRNVLEKQILERLINDRLQLQYAAQTGLRVDDDQLDKTIMRIAEQNKMGVPEFKEA 126
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIR 181
L +GI F++ + + + + + + + E E+ Q + + EY I
Sbjct: 127 LAAEGIVYKKFREDIRNEILLARLREREVDNRVNVTESEVDNFLTTQSSRQDSSDEYEIS 186
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQYL 237
+L P++ KR+++ E L+ + + ++++ D GK +
Sbjct: 187 HILIRAPEDGSPEDL---KRLREKAEDALKKLQAGEDFGQVSARVSDAPNALEGGKLGWK 243
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+ + F LK Q + + G + + D+R
Sbjct: 244 TAAQVPALFLEALKPMQVGQLSGILRSPNGFHILKLTDRR 283
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 58/152 (38%), Gaps = 4/152 (2%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + V++ R +L + + ++ +++I ++ +++++
Sbjct: 282 RRGGNTSTMVQQTHTRHILIKTSE--VLSETEAKRKIDGIKQLIDNGEDFGEAAKRYSND 339
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIA 283
+ G ++ D PQF+ + ++ + G I + ++R+ A
Sbjct: 340 GSAANGGDLGWVNPGDTVPQFEKAMNALQPGQISDAVRSPFGWHLIQVLERRNQDMTREA 399
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ ++V++LR A +
Sbjct: 400 ERMKARQEIRQRKADEAYQDWVRELRDRAYVE 431
>gi|253998290|ref|YP_003050353.1| SurA domain-containing protein [Methylovorus sp. SIP3-4]
gi|253984969|gb|ACT49826.1| SurA domain protein [Methylovorus sp. SIP3-4]
Length = 438
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 113/280 (40%), Gaps = 22/280 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQ-KING 70
L L + ++P V+ + S RI ++ V+T+ +++ RI ++ Q + G
Sbjct: 7 LMAGVFLWLGALIPHVASAAQDGSVNKIDRIVAVVDQGVVTEKELNDRIEIVSAQLEKQG 66
Query: 71 E-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
LEK ++ LI + L+ Q ++G+ D + ++ ++ A + +F
Sbjct: 67 NQLPPRNVLEKQILERLINDRLQLQYAAQTGLRVDDDQLDKTIMRIAEQNKMGVPEFKEA 126
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIR 181
L +GI F++ + + + + + + + E E+ Q + + EY I
Sbjct: 127 LAAEGIVYKKFREDIRNEILLARLREREVDNRVNVTESEVDNFLTTQSSRQDSSDEYEIS 186
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQYL 237
+L P++ KR+++ E L+ + + ++++ D GK +
Sbjct: 187 HILIRAPEDGSPEDL---KRLREKAEDALKKLQAGEDFGQVSARVSDAPNALEGGKLGWK 243
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+ + F LK Q + + G + + D+R
Sbjct: 244 TAAQVPALFLEALKPMQVGQLSGILRSPNGFHILKLTDRR 283
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 58/152 (38%), Gaps = 4/152 (2%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + V++ R +L + + ++ +++I ++ +++++
Sbjct: 282 RRGGNTSTMVQQTHTRHILIKTSE--VLSETEAKRKIDGIKQLIDNGEDFGEAAKRYSND 339
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIA 283
+ G ++ D PQF+ + ++ + G I + ++R+ A
Sbjct: 340 GSAANGGDLGWVNPGDTVPQFEKAMNALQPGQISDAVRSPFGWHLIQVLERRNQDMTREA 399
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++ ++V++LR A +
Sbjct: 400 ERMKARQEIRQRKADEAYQDWVRELRDRAYVE 431
>gi|242238056|ref|YP_002986237.1| peptidyl-prolyl cis-trans isomerase SurA [Dickeya dadantii Ech703]
gi|242130113|gb|ACS84415.1| Peptidylprolyl isomerase [Dickeya dadantii Ech703]
Length = 433
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 96/267 (35%), Gaps = 11/267 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + + + + ++ ++ V+ + DI+ + +K+ L
Sbjct: 7 LILGLALSANTVFAAPQVMDKVAAVVDNGVVLESDINSLMQSVKMNSQESGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G + ++ A+ ++ + S L +GI +
Sbjct: 67 RHQILERLIMDNIVLQMAQKMGAQVSDDQLDRAIANIAQQNHMTLDQLRSRLAAEGINYD 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNK 191
++ + DV ++ + L E+ A +Q + +E + +L +P+N
Sbjct: 127 TYRSQIRKDMTIADVRNSEVRRRVTVLPQEVDALAQQIASQGSDKEVNLSQILLPLPENP 186
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLL 250
Q Q + + + R D KL S G+ + +L F L
Sbjct: 187 SQEQVDKAESLANRLVKDARQGADFGKLAITYSADPQALKGGQMGWGRPQELPSLFAERL 246
Query: 251 KKS-QNNTTNPYVTQKGVEYIAICDKR 276
+ P + G + + D R
Sbjct: 247 ANPEKGQVIGPIRSGVGFHILRVNDTR 273
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 65/241 (26%), Gaps = 29/241 (12%)
Query: 96 TFDSNTVN--YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD------- 146
V+ DF K Q W
Sbjct: 185 NPSQEQVDKAESLANRLVKDARQGADFGKLAITYSADPQALKG---GQMGWGRPQELPSL 241
Query: 147 -----------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
V G + + + + I+V E R +L + + N
Sbjct: 242 FAERLANPEKGQVIGPIRSGVGFHILRVNDTRGGNQAISVTETHARHILLKT--SVVMND 299
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKK 252
+ +++D K S+ + G + P F++ L++
Sbjct: 300 AQARTKLEDVARQIKSGSTSFAAQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALMQL 359
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSN 311
+ + P + G I + D R + A + + + K + ++++ R++
Sbjct: 360 KKGEISAPVRSSFGWHLIQLLDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEKRAS 419
Query: 312 A 312
A
Sbjct: 420 A 420
>gi|238786686|ref|ZP_04630487.1| Chaperone surA [Yersinia frederiksenii ATCC 33641]
gi|238725054|gb|EEQ16693.1| Chaperone surA [Yersinia frederiksenii ATCC 33641]
Length = 434
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 105/283 (37%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
G L ++ LI++ + Q +K GIT ++ A ++ + S L
Sbjct: 59 QVPDDGTLRHQVLERLIMDNILLQMAKKMGITVSDEALDKAIADIAAQNRMTPDQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ N +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYNTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEDLANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + + P + G + + D R G +
Sbjct: 239 LPSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 69/244 (28%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ A L ++ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EDLA--NKLVSDIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
V G +++ + K ++V E R +L + +
Sbjct: 240 PSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEIHARHILLK--PSPV 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-L 249
+ ++ A + K S+ + G + P F++ +
Sbjct: 298 MTDEQARAKLSAAAADIKSGKSSFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDAV 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLQKGEISAPVHSSFGWHLIQVIDNRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|319940878|ref|ZP_08015217.1| hypothetical protein HMPREF9464_00436 [Sutterella wadsworthensis
3_1_45B]
gi|319805760|gb|EFW02541.1| hypothetical protein HMPREF9464_00436 [Sutterella wadsworthensis
3_1_45B]
Length = 460
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/289 (19%), Positives = 105/289 (36%), Gaps = 21/289 (7%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIAL 62
T+L+ + ++ P ++ A S RI +N ++IT+ ++ +R+
Sbjct: 11 LTALALSGASVQAASIMDSVPATPSAGEQAPAASGELDRIVAVVNNDIITEHELEQRVHT 70
Query: 63 LKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+ + L ++ LI E Q ++GI D VN Q AR
Sbjct: 71 VAINLRRQNIQLPAMELLRAQVLERLISERAILQRARQTGIRVDDQMVNASVEQIARQNN 130
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMK 171
LS E+ L G+ F+ + + + + + K E EI A + +K
Sbjct: 131 LSIEELRQRLAADGVNFASFRNEIRDEITTQRLREREVNEKIDISESEIDAYLAEQAGIK 190
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-S 230
EY + +L + + +N ++ R R ++ + L S+ D
Sbjct: 191 GDDKMEYHVEHILLPV-ETPAENDSVKTA--AESLAKRARDGENFSSLAASFSRADDAMK 247
Query: 231 IGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRD 277
G + +DL F L+ + + +Q+ + DKRD
Sbjct: 248 GGDLGWRSLNDLPATFAEALRANSTPGSVYV-VSSQRAWHVFKLEDKRD 295
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 8/191 (4%)
Query: 131 DNHFKQYLAIQSIWPDV--VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
F + L S V V + LE + + K+ V + R +L +
Sbjct: 260 PATFAEALRANSTPGSVYVVSSQRAWHVFKLEDKRDGVQAKLGGGPVEQTHARHILMFVS 319
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQ 247
D + +R+ D + D + + S + G +L D P+F+
Sbjct: 320 DITPEGDVI--RRLNDIKNRVQSGEADFATMARLHSVDSTATRGGDLGWLQPGDTVPEFE 377
Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEY 304
++ K ++P T G I + ++R + ++A+ K+ + E+
Sbjct: 378 GVMNKLKPGQISDPIRTPYGYHLIQVVERRTEKDGNPERMRVAARQAIRQKKLAEASYEW 437
Query: 305 VKKLRSNAIIH 315
++LR A +
Sbjct: 438 ERELRDQAFVE 448
>gi|330719900|gb|EGG98375.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [gamma proteobacterium IMCC2047]
Length = 429
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 118/314 (37%), Gaps = 16/314 (5%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66
L+ K TT +L C+ P + Y + RI +N ++I + + I A+ LQ
Sbjct: 2 LNSLRKYFTT--LLAALCLAPSMLYAAIQPLDRIAVIVNDDIIMQSQVQQAIDSAIRNLQ 59
Query: 67 KINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ N + L + V+ LI+E+L+ Q E+ GI D ++N + A ++ E F
Sbjct: 60 QRNQQMPPKKVLIQQVVESLIMESLQLQIAERGGIRVDDTSLNEAISRIAAQNNMTLEQF 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREY 178
+ +G ++ + + + + + + EI K + ++
Sbjct: 120 QQAIIAEGSDYAATREQIRRELLTTRARQGSVGPRIQITDQEIDNFLDSAEGKALLASKF 179
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
I +L +N + +K+ + + ++++ + G +
Sbjct: 180 HIAHILVKPDNNTQPARQKAKKQAQALYQQLQSGADFAALTKQYSDGPNAEQGGSMGWRD 239
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
ES L F+N +K + P + G + + +KR + ++ Q
Sbjct: 240 ESQLPSLFKNTVKALNDGEVSEPIASSNGFHLVKLLEKRGGTSIIQDQTQVRHILIQPNE 299
Query: 295 TKIEKHEAEYVKKL 308
+ E+ E + L
Sbjct: 300 IRSERQAEEMIYDL 313
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
K+ +I + +R +L I N+++++ ++ I D +R++ +D +L + S
Sbjct: 275 LEKRGGTSIIQDQTQVRHIL--IQPNEIRSERQAEEMIYDL-FTRIQSGEDFAELARLYS 331
Query: 225 KIHD--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--DLG 279
G+ ++ + L P F ++K++ + + P+ ++ G + + +R D+G
Sbjct: 332 ADPGSRAKGGELGWITPAGLVPSFVKVMKETPVDGISAPFKSRYGWHILEVQGRRQQDIG 391
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ A + K + +++++R++A
Sbjct: 392 AD-AARQQAREVIYRRKFNEELQLWLREIRNDA 423
>gi|16125933|ref|NP_420497.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter
crescentus CB15]
gi|13423099|gb|AAK23665.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter
crescentus CB15]
Length = 501
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 98/256 (38%), Gaps = 17/256 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALL----KLQKINGEL---EKIAVQELIVETLKKQEIE 91
S + +N ++I+ D+ +R+ LL +Q L E+ A++ LI E L+ QE++
Sbjct: 106 SESVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIEQEALRSLIDERLQMQELK 165
Query: 92 KSG------ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ I V A++ L E L QGIG + ++ L +S W
Sbjct: 166 RVEKQQKITIISTDKEVEEQIGDIAQSNRLQPEQLKQQLVAQGIGLDTWRAQLRAESSWQ 225
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++ + + E +I A ++++ + +Y I V +
Sbjct: 226 SWIQGRYGSRLRIGEDQIKAYQRRLADAAAKPQYQISEVFLDAARVGGMEVAVNGA-TQL 284
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVT 263
+ + P +F+ + G+ ++ + ++ + L++ + P
Sbjct: 285 INQMQQGAP-FAAVARQFSGSATAANGGEVGWVSQGEMPTEVDAALEQLRPGQLSRPIQV 343
Query: 264 QKGVEYIAICDKRDLG 279
+ GV I + DKR
Sbjct: 344 KDGVYIIYLRDKRAGS 359
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ P + + K + + ++ C LE A+K+ + G +DL
Sbjct: 368 QVAAPLAADATEAQIAAATKQLVDLKPKI-TSCQSLEATAAKVDGLVAGDLGEAEITDLA 426
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
P FQ K + ++P T G+ IA+C KR G + + ++
Sbjct: 427 PAFQEAANKLEVGQISDPIRTDAGLHLIAVCGKRQGGANAPTHDQIENRLRGQQLALIAK 486
Query: 303 EYVKKLRSNAIIH 315
Y++ LR+ A I
Sbjct: 487 RYLRDLRNQATIE 499
>gi|156973131|ref|YP_001444038.1| hypothetical protein VIBHAR_00810 [Vibrio harveyi ATCC BAA-1116]
gi|156524725|gb|ABU69811.1| hypothetical protein VIBHAR_00810 [Vibrio harveyi ATCC BAA-1116]
Length = 427
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L+ ++ + ++ +N VI DI + L+ L+
Sbjct: 7 LLFTALLSCGVTAAPVELDKVAVIVNDGVILQSDIDTAMKTLQANARQSGKSLPSASVLK 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + +G+ +
Sbjct: 67 DQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAEGLSYSE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + ++ T +Y I + D+K
Sbjct: 127 FREQIRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQLRFSDDK 186
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+++ + +A +L+ D +++ ++ + G ++ + ++ F + +
Sbjct: 187 DKSEVEAE---ANALVKKLKDGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQI 243
Query: 251 K-KSQNNTTNPYVTQKGVEYIAICDKR 276
K +++ + P+ + G + I D +
Sbjct: 244 KMQNKGSIIGPFRSGIGFHILKIEDVK 270
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 15/192 (7%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L P
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGIGFHILKIEDVK-GLETVAVTEVNARHILIK-PTV 291
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQ 245
L + G K+ E R+ + A++ G+ Y P+
Sbjct: 292 ILSDDGA----KKELNEFIRRIKAGEATFGQLATQYSQDPGSAAQNGELGYQTPDLYVPE 347
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAE 303
F++ ++ + + P+ T G + + D+R + + A+K K +
Sbjct: 348 FKHQVETLPVGSISAPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGA 407
Query: 304 YVKKLRSNAIIH 315
++++LR++A +
Sbjct: 408 WMQELRASAFVE 419
>gi|148977503|ref|ZP_01814092.1| parvulin-like peptidyl-prolyl isomerase [Vibrionales bacterium
SWAT-3]
gi|145963298|gb|EDK28564.1| parvulin-like peptidyl-prolyl isomerase [Vibrionales bacterium
SWAT-3]
Length = 431
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 102/275 (37%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+ L + I S+ +R +N VI DI + L+
Sbjct: 1 MTLWKRTLIAIAAACTVSTSFADPVELDSVRVIVNEGVILQSDIDTSMKTLRANAKKSGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L++ +++LI++T++ QE E+ G+ D ++ A++ + E ++ +
Sbjct: 61 TLPSQDVLDEQVLEKLIIDTIQTQEAERIGVRIDDARLDQAIEGIAKDNNQTVEQLTASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
++G+ N F++ + + + + L E+ + T +Y I
Sbjct: 121 AEEGLSYNAFREQVRKEIAASEARNALVRRRINILPAEVDNLADILAQETNATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ N Q + ++ + K+ E ++ + G ++ + ++
Sbjct: 181 IQLRF--NDDQTKEELEAQAKELVEELNSGKDFSTMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ + P+ + G + I D +
Sbjct: 239 PTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 273
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 72/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L P
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHILIK-PTV 294
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
L + G ++ +++ + + S+ ++ G+ Y P+F++
Sbjct: 295 ILSDDGAKEQ-LEEITRRVNAGEASFGDMAQQYSQDPGSAVQDGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + +++
Sbjct: 354 QVETLPEGKISAPFKTVHGWHIVEVLDRREVDRTDSALKNKAYQILFNRKFNEEAGAWLQ 413
Query: 307 KLRSNAIIH 315
++R++A +
Sbjct: 414 EVRASAFVE 422
>gi|153834210|ref|ZP_01986877.1| chaperone SurA [Vibrio harveyi HY01]
gi|148869398|gb|EDL68404.1| chaperone SurA [Vibrio harveyi HY01]
Length = 427
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L+ ++ + ++ +N VI DI + L+ L+
Sbjct: 7 LLFTTLLSCGVTAAPVELDKVAVIVNDGVILQSDIDTAMKTLQANARQSGKSLPSASVLK 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + +G+ +
Sbjct: 67 DQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAEGLSYSE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
F++ + + + + L E+ + ++ T +Y I + D+K
Sbjct: 127 FREQIRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQLRFSDDK 186
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+++ + +A +L+ D +++ ++ + G ++ + ++ F + +
Sbjct: 187 DKSEVEAE---ANALVQKLKDGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQI 243
Query: 251 K-KSQNNTTNPYVTQKGVEYIAICDKR 276
K +++ + P+ + G + I D +
Sbjct: 244 KMQNKGSIIGPFRSGIGFHILKIEDVK 270
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 15/192 (7%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L P
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGIGFHILKIEDVK-GLETVAVTEVNARHILIK-PTV 291
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQ 245
L + G K+ E R+ + A++ G+ Y P+
Sbjct: 292 ILSDDGA----KKELNEFIRRIKAGEATFGQLATQYSQDPGSAAQNGELGYQTPDLYVPE 347
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAE 303
F++ ++ + + P+ T G + + D+R + + A+K K +
Sbjct: 348 FKHQVETLPVGSISAPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGA 407
Query: 304 YVKKLRSNAIIH 315
++++LR++A +
Sbjct: 408 WMQELRASAFVE 419
>gi|251788205|ref|YP_003002926.1| peptidyl-prolyl cis-trans isomerase SurA [Dickeya zeae Ech1591]
gi|247536826|gb|ACT05447.1| Peptidylprolyl isomerase [Dickeya zeae Ech1591]
Length = 430
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 97/269 (36%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGE 71
+++ + +++ + ++I ++ V+ + DI+ + +KL +
Sbjct: 6 ALVLGLALSANMAFAAPQEVNKIAAVVDNSVVLESDINSLLQSVKLNAQEAGQQLPDDAT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ LI++ + Q +K G+ ++ A +S + S L +G+
Sbjct: 66 LRHQILERLIMDNIILQMAQKMGVQVTDEQLDRSIANIAAQNRMSIDQLRSRLTAEGVSF 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPD 189
+ ++ + I DV ++ + L E+ + Q + E + +L +P+
Sbjct: 126 DTYRGQIRKDMIIADVRNSEVRRRVTVLPQEVDSLAQQLASQGANGPEVNLSQILLPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q+Q + + + D KL S G+ + +L F
Sbjct: 186 NPTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQELPTLFAE 245
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L Q P + G + + D R
Sbjct: 246 RLTNPQKGQIVGPIRSGVGFHILRVNDTR 274
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 83/299 (27%), Gaps = 65/299 (21%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFL------- 124
+++I+ ++ E+ + +T V+ Q A E + S L
Sbjct: 129 RGQIRKDMIIADVRNSEVRRR-VTVLPQEVDSLAQQLASQGANGPEVNLSQILLPLPENP 187
Query: 125 ------------------DKQGIG-----------DNHFKQYLAIQSIWPD--------- 146
QG K Q W
Sbjct: 188 TQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKG---GQMGWGRPQELPTLFA 244
Query: 147 ---------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ G + + + + ++V E R +L + + + N
Sbjct: 245 ERLTNPQKGQIVGPIRSGVGFHILRVNDTRGGAQAVSVTEVHARHILLTT--SVVMNDAQ 302
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQ 254
+ ++++ K S+ + G + P F++ L + +
Sbjct: 303 ARAKLEEVAGQIKSGKLSFANAAKQLSQDPGTANQGGDLGWASPEMYDPAFRDALTQLKK 362
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + ++++ R+ A
Sbjct: 363 GEISTPVHSSFGWHLIQLLDTREVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEKRAAA 421
>gi|134093645|ref|YP_001098720.1| periplasmic peptidyl-prolyl cis-trans isomerase (PPIase), involved
in maturation of outer membrane proteins [Herminiimonas
arsenicoxydans]
gi|133737548|emb|CAL60591.1| Chaperone SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA)
(PPIase SurA) (Rotamase SurA) [Herminiimonas
arsenicoxydans]
Length = 469
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 105/282 (37%), Gaps = 13/282 (4%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKI 68
+ L T S ++ I +N EVIT + +R+ ++ +L+
Sbjct: 25 GLMSGLMTNVTAQNMAPNASTSRLQPRLADAILVVVNNEVITRYEFIERLKVIENRLKGQ 84
Query: 69 NGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
G+ L++ ++ +IVE + Q+ ++SGI D ++ + A L+ +F
Sbjct: 85 GGQMPPMEQLQRQLLERMIVERAQLQQAKESGIKVDDAMLDRAVARIADQNQLTMPEFRK 144
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYL 179
L++ G+ F++ + + I + + + K + E+ A +E
Sbjct: 145 RLEQDGMVYFQFREEIRSEMILQRLREREVDNKIQVSDAEVDAYMAEHSGTNANAPQELN 204
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLL 238
+ +L +P+N Q ++ + ++L D K ++ ++ G+ +
Sbjct: 205 LGQILIRVPENATPQQLADSRKRAEEVLAQLNAGGDFAKLAAAYSDGTDGLTGGELGWRT 264
Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ L F + Q + G + + KR
Sbjct: 265 QDRLPQLFVDATASLQQGQIAPLVKSGNGFHILKVLGKRTQS 306
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/313 (10%), Positives = 98/313 (31%), Gaps = 74/313 (23%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT------------------G 114
+ E+I++ L+++E++ I V+ + +H+
Sbjct: 157 REEIRSEMILQRLREREVDN-KIQVSDAEVDAYMAEHSGTNANAPQELNLGQILIRVPEN 215
Query: 115 LSAEDFSS-------FLDKQGIGDNHFKQYLA----------IQSIWPD----------- 146
+ + + L + G + K A + W
Sbjct: 216 ATPQQLADSRKRAEEVLAQLNAGGDFAKLAAAYSDGTDGLTGGELGWRTQDRLPQLFVDA 275
Query: 147 -----------VVKN-------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+VK+ + K + TV++ +L +
Sbjct: 276 TASLQQGQIAPLVKSGNGFHILKVLGKRTQSVLRAAPGANPAAANTVKQTHASHILIKV- 334
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQ 247
N++ + ++++ + ++ +L + S S G ++ D P+F+
Sbjct: 335 -NQVVSAADARRKLTELKQRLDNKAATFEELARLHSNDFSASKGGDLGWIYPGDTVPEFE 393
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPTKIEKHEAE 303
+ + P + G I + +++ +++ + + K+E+ +
Sbjct: 394 RAMDALPVGEVSEPIESPFGYHLILVKERK--SDDVSQERQRLVVRQALRAQKVEEATQD 451
Query: 304 YVKKLRSNAIIHY 316
+++++R A + Y
Sbjct: 452 WLRQVRDRAYVEY 464
>gi|238897972|ref|YP_002923652.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465730|gb|ACQ67504.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 322
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 114/308 (37%), Gaps = 17/308 (5%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-------- 71
+VL+ + + ++I +N VI D++ R+ +K+ N
Sbjct: 7 YVLVWLLCSHFTVFSAPKEINKIVAIVNDSVILLSDLNHRLKAIKINANNINQSLPDDAI 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ LIVE+++ Q K G+ ++ AR L+ + S L + I
Sbjct: 67 LRHQILERLIVESIQLQIANKIGLKIPDEDLDKIIADIARKNRLTVDQIRSKLASENINY 126
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPD 189
++ + Q + +V+KN + L E+ + + + E + +L + +
Sbjct: 127 GTYRNEIRNQILISEVLKNAVQPRINILPQEVDSLSKLILNEKNQNMELNLSQILIPLTE 186
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q + ++ + S+L+ + KL S G + +L F
Sbjct: 187 NPSQKEIDKAEKKANKLVSQLKKGANFAKLAIAYSADSQAFKGGTMGWKKVQELPTLFSE 246
Query: 249 LLKKSQN-NTTNPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHEAEY 304
LK + P + G + I D + +I +AY K + +
Sbjct: 247 KLKVIHKFDIIGPIRSGVGFHILRINDLHTIFENSEDIKNQAYKI--LFNRKFSEQAETW 304
Query: 305 VKKLRSNA 312
+++ R++A
Sbjct: 305 IQEQRASA 312
>gi|238782669|ref|ZP_04626699.1| Chaperone surA [Yersinia bercovieri ATCC 43970]
gi|238716329|gb|EEQ08311.1| Chaperone surA [Yersinia bercovieri ATCC 43970]
Length = 434
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 105/283 (37%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+++++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDATLRHQILERLIMDSIQLQMAKKMGITVSDEALDKAIADIAAQNRMTPAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEELANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + + P + G + + D R G +
Sbjct: 239 LPSLFAEKLQSANKGDVVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ + A L ++ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EELA--NKLVSDIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
V G +++ + K ++V E R +L + +
Sbjct: 240 PSLFAEKLQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEVHARHILLK--PSPV 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN-L 249
+ ++ A + K S+ ++ G + P F++ L
Sbjct: 298 MTDDQARAKLAAAAADIKSGKTTFANIAKEISQDPGSAVQGGDLGWASPDIYDPAFRDAL 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLQKGEISAPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|271502081|ref|YP_003335107.1| Peptidylprolyl isomerase [Dickeya dadantii Ech586]
gi|270345636|gb|ACZ78401.1| Peptidylprolyl isomerase [Dickeya dadantii Ech586]
Length = 430
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 97/269 (36%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGE 71
+++ + +++ + ++I ++ V+ + DI+ + +KL +
Sbjct: 6 ALVLGLALSANMAFAAPQEVNKIAAVVDNSVVLESDINSLLQSVKLNAQEAGQQLPDDAT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ LI++ + Q +K G+ ++ A +S + S L +G+
Sbjct: 66 LRHQILERLIMDNIIMQMAQKMGVQVTDEQLDRSITNIAAQNHMSLDQLRSRLAAEGVSF 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPD 189
+ ++ + + DV ++ + L E+ A Q + E + +L +P+
Sbjct: 126 DTYRSQIRKDMMIADVRNSEVRRRVTVLPQEVDALAQQLASQGANGPEVNLSQILIPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q+Q + + + D KL S G+ + +L F
Sbjct: 186 NPTQDQVDKAESLANRLVKEASQGADFGKLAITYSADPQALKGGQMGWGRPQELPSLFAE 245
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L Q P + G + + D R
Sbjct: 246 RLANPQKGQIIGPIRSGVGFHILRVNDTR 274
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 53/150 (35%), Gaps = 6/150 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + ++V E R +L + + + N + ++++ K S+
Sbjct: 274 RGGSQAVSVTEVHARHILLTT--SVVMNDAQAKAKLEEVASQIRSGKLSFAAAAKQLSQD 331
Query: 227 HDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G + P F++ L+ + + P + G I + D R + A
Sbjct: 332 PGSANQGGDLGWASPDMYDPAFRDALMDLKKGEISAPVHSSFGWHLIQLLDTRQVDKTDA 391
Query: 284 LKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R+ A
Sbjct: 392 AQKDRAYRMLFNRKFAEEAQTWMQEKRAAA 421
>gi|330448801|ref|ZP_08312448.1| peptidyl-prolyl cis-trans isomerase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492992|dbj|GAA06945.1| peptidyl-prolyl cis-trans isomerase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 433
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 122/314 (38%), Gaps = 15/314 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+K + ++ + S + ++ T+N VI D++ + + L
Sbjct: 1 MKKWKYSVLSLMMMGMSATSMAAPQELDQVVMTVNDGVILQSDVNAMLKTVHLNAAEEHQ 60
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
N L + + +LI+E L+ Q+ ++ GI D + ++ A+ G++ + L
Sbjct: 61 QLPPNDILRQQVMDKLIMENLQIQQAKQLGIRIDDSQLDQAIADVAKQRGITVDQLRQTL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDV--VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
K GI F++ + + + V + E++ A + + +Y I
Sbjct: 121 AKAGISYPMFREQMRNDMLASEARTVIVRKRVNILPQEVDALAKQMAKQTQQNVQYNISQ 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + ++ + K+ + ++L+ D ++L +++ + G+ ++ + +
Sbjct: 181 IQIRVDEDAEKAARDKAKQEAEDIVAQLKKGADFSQLAYRYSKGPKALKGGEWGWMSKEE 240
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297
+ F + ++ ++ P+ + G + I D + + ++ + +
Sbjct: 241 MPTIFADQIQNNGKDAIIGPFRSGVGYHILKINDVKGMPSVSVVEVKARHILIKPSVILS 300
Query: 298 EKHEAEYVKKLRSN 311
+ + ++++R
Sbjct: 301 DAAAKKELEQIRQR 314
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
M +++V E R +L I + + + +K ++ + + + K S+
Sbjct: 277 GMPSVSVVEVKARHIL--IKPSVILSDAAAKKELEQIRQRIISGKQSFAAAAKAYSQDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + + P F++ ++ + + P+ + G + + +R + + A+
Sbjct: 335 SAANGGELGWQVPDMYAPAFKDKVETLPVDKISEPFKSAFGWHIVEVEGRRKVDRTDAAM 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K + K + ++++LR+ A I
Sbjct: 395 KNRAAQILFNRKFNEEAQTWLQELRAGAYIE 425
>gi|283856448|ref|YP_163047.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ZM4]
gi|283775452|gb|AAV89936.2| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 435
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 98/267 (36%), Gaps = 18/267 (6%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEK-----------IAVQELIVETLKKQEIEK 92
+NG +IT+ DI +R AL+ L G++ + ++ LI ETL+ QE +
Sbjct: 37 AIVNGTIITNTDIEQRFALI-LASAGGDVSRISEEDRNMARLQILRNLIDETLEIQEAKA 95
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ I ++ F +ARN + E FS+ L G K+ + W ++
Sbjct: 96 NDIIITPTELDQIFEHYARNMKKTPEAFSADLQAIGSSAKSVKRQVEADMAWRRLLGRRV 155
Query: 153 MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL- 210
E+ +MK + EY I + FS D +I+D R
Sbjct: 156 EPFVNISNEEVQNIINRMKAAKGKDEYHIAEIFFSANDTNRAEVRAKANKIQDQILQRGN 215
Query: 211 ---RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266
R+ +++ G ++ L ++K + P T G
Sbjct: 216 TNERMGLFSAFASQYSEASSAARGGDMGFIQAEQLPDALAAVVKNMPVGSLMGPIETPGG 275
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNT 293
+A+ +K+ + G A ++ +
Sbjct: 276 FSIVALLEKQQILGIDPKDAIVALKQI 302
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 180 IRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
++ + + P QN +++DA + K C +++ A KI + +
Sbjct: 299 LKQIYVNFPPGTSQNVADEKTAKLRDA----TKELKGCGSVDEIAHKI-GADVMSNDQIS 353
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPY-VTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295
+ P QN++ K Q +T P+ Q+GV + +C + D + + Q
Sbjct: 354 IRSMPPLLQNMVAKLQVGESTLPFGSIQEGVSVLVVCGRDDPKVAKQPNFQQIHNQLQED 413
Query: 296 KIEKHEAEYVKKLRSNAIIHY 316
++ K Y++ LR +AII Y
Sbjct: 414 RVNKRAIRYLRDLRRDAIIDY 434
>gi|86148121|ref|ZP_01066421.1| parvulin-like peptidyl-prolyl isomerase [Vibrio sp. MED222]
gi|218708410|ref|YP_002416031.1| putative parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus
LGP32]
gi|85834108|gb|EAQ52266.1| parvulin-like peptidyl-prolyl isomerase [Vibrio sp. MED222]
gi|218321429|emb|CAV17381.1| putative Parvulin-like peptidyl-prolyl isomerase [Vibrio splendidus
LGP32]
Length = 431
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 101/275 (36%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+ L + I SY + ++ +N VI DI + L+
Sbjct: 1 MTLWKRTLIAIAAACTLSTSYAAPVELDSVKVIVNEGVILQSDIDTSMKTLRANAKKSGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++T++ QE E+ G+ D ++ A++ + + ++ +
Sbjct: 61 TLPSQDVLNEQVLEKLIIDTIQTQEAERIGVRIDDARLDQAIEGIAKDNNQTVQQLTASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
++G+ N F++ + + + + L E+ + T +Y I
Sbjct: 121 AEEGLSYNAFREQVRKEIAASEARNALVRRRINILPAEVDNLADILAQETNATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ N Q + ++ + D E ++ + G ++ + ++
Sbjct: 181 IQLRF--NDDQTKEELEAQATDLVEELNNGKDFSTMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ + P+ + G + I D +
Sbjct: 239 PTIFADQIKMQNKGSIIGPFRSGVGFHILKIEDVK 273
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 72/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L P
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHILIK-PTV 294
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
L + G ++ +++ L + S+ ++ G+ Y P+F++
Sbjct: 295 ILSDDGAKEQ-LEEITRRVNAGEASFGDLAQQYSQDPGSAVQDGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + +++
Sbjct: 354 QVETLPEGKISAPFKTVHGWHIVEVLDRREVDRTDSALKNKAYQILFNRKFNEEVGAWLQ 413
Query: 307 KLRSNAIIH 315
++R++A +
Sbjct: 414 EVRASAFVE 422
>gi|330830997|ref|YP_004393949.1| peptidylprolyl cis-trans isomerase SurA [Aeromonas veronii B565]
gi|328806133|gb|AEB51332.1| Peptidylprolyl cis-trans isomerase SurA [Aeromonas veronii B565]
Length = 434
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 103/278 (37%), Gaps = 12/278 (4%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
D K L +F + + + + ++ +N +V+ + +KL
Sbjct: 2 DMKKTLIALLTAGMFGAMSQAALAAPELMDKVLAVVNKDVVLSSQQDALVNKVKLSAQES 61
Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
L K A+ LI E+L+ Q E+ G+ + A + ++ + +
Sbjct: 62 GQSLPDDATLRKQALDRLIQESLQLQLAERQGLKISDTQLEQAIQGIAADNKMTLDQLRA 121
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLI 180
L ++G+ +++ + + + +V +N + E E+ + +K + EY +
Sbjct: 122 QLAREGMTYAQYREEVRREILMNEVRRNQVRRRINISEQEVKQVVEILKKQGQQQNEYHV 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLE 239
+ ++PDN Q K + + L+ D KL ++ + G ++
Sbjct: 182 GHIQIALPDNPTAAQLDAAKSKIERILAALKQGADFRKLAIAESNGPKALEGGDWGWMSP 241
Query: 240 SDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
++ ++ + + P + G+ + + D +
Sbjct: 242 QEMPTLMAEAVQGAKKGDIVGPLRSGAGLHIVKVFDTK 279
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 54/151 (35%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFS--IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + E R +L I ++ + +G + + D + + K +
Sbjct: 280 GQQQVMQTEVKARHILIKPSIILSEEKAKGMLDGILHDIKSGKASFASMAEKYSEDPGSA 339
Query: 227 HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIAL 284
V G+ + + P+F++++ + + P+ T G + + D+R + A
Sbjct: 340 --VQGGELGWSDPNVYVPEFRDMVNRLQPGQISAPFRTSHGWHIVQVEDRRSQDATDKAQ 397
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + ++ +LR A I
Sbjct: 398 EQRAYQLIYNRRFVEESQAWLDELRDEAYIQ 428
>gi|87198910|ref|YP_496167.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
aromaticivorans DSM 12444]
gi|87134591|gb|ABD25333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Novosphingobium
aromaticivorans DSM 12444]
Length = 456
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 15/268 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKS 93
R +NGE+IT D+ +R+AL+ L ++ LI ETL+ QE + +
Sbjct: 64 RATAIVNGEIITGTDVEQRLALIVSANGGKIDGEEKERLRMQVLRNLIDETLQIQEAKAA 123
Query: 94 GITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ D V+ + + A G SA+ +L + G K+ + + W ++++ +
Sbjct: 124 DVPADDGQVDASYERVATQNFGQSADALEKYLARIGSSAASLKRQIRGEIAWQNLLRRNV 183
Query: 153 MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRL 210
E E+ Q+++ EY I + + +NK Q +K ++ ++
Sbjct: 184 QPFVNVSEGEVQEAMQRLQASKGTEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQG-- 241
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
+++ G ++ + L + P + G
Sbjct: 242 --GSFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPGQLAGPVEIRGGFSI 299
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKI 297
+ + DKR + A LS + +
Sbjct: 300 LYLIDKRQVLTADPRDALLSLKQISIEF 327
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 12/180 (6%)
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q P ++ F + Y + ++ + +++++ I K
Sbjct: 285 GQLAGPVEIRGGFSILYLIDKRQVLTADPRDALLSLKQISIEF-------PKGATNEIAT 337
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
KR + + + K C E A+KI ++ + DL Q LL TT
Sbjct: 338 KRAAEFAAAVKAI-KGCGDAEAQANKI-GATVVANDQIKARDLPGALQETLLNLPIGQTT 395
Query: 259 NPY-VTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
P+ ++GV + +C + D + AQ ++ K Y++ LR +A+I Y
Sbjct: 396 PPFGSIEEGVRVLMLCGRDDPQVNSGPSFDEMMAQIEDDRVNKRAQTYLRDLRRDAVIEY 455
>gi|332160260|ref|YP_004296837.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|325664490|gb|ADZ41134.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 434
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 101/276 (36%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDATLRHQILERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEDLAKKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
L F L+ S+ + P + G + + D R
Sbjct: 239 LPSLFAERLQSASKGDVVGPIRSGVGFHILKVNDIR 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 31/242 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----- 147
V+ A+ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EDLAKKLVSDIKGGADFGKLAIANSADSQALKG---GQMGWGKLQELPS 241
Query: 148 -------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
V G +++ + K I+V E R +L + +
Sbjct: 242 LFAERLQSASKGDVVGPIRSGVGFHILKVNDIRGTDKTISVTEVHARHILLK--PSPVMT 299
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLK 251
+ ++ A + + K S+ + G + P F++ L+K
Sbjct: 300 DDQARAKLTAAAADIKSGKANFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDALMK 359
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRS 310
+ + P + G I + D R + A + + + K + ++++ R+
Sbjct: 360 LQKGEISAPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRA 419
Query: 311 NA 312
A
Sbjct: 420 AA 421
>gi|241761719|ref|ZP_04759806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|260752284|ref|YP_003225177.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|241374027|gb|EER63560.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|258551647|gb|ACV74593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 471
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 98/267 (36%), Gaps = 18/267 (6%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEK-----------IAVQELIVETLKKQEIEK 92
+NG +IT+ DI +R AL+ L G++ + ++ LI ETL+ QE +
Sbjct: 73 AIVNGTIITNTDIEQRFALI-LASAGGDVSRISEEDRNMARLQILRNLIDETLEIQEAKA 131
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ I ++ F +ARN + E FS+ L G K+ + W ++
Sbjct: 132 NDIIITPTELDQIFEHYARNMKKTPEAFSADLQAIGSSAKSVKRQVEADMAWRRLLGRRV 191
Query: 153 MLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL- 210
E+ +MK + EY I + FS D +I+D R
Sbjct: 192 EPFVNISNEEVQNIINRMKAAKGKDEYHIAEIFFSANDTNRAEVRAKANKIQDQILQRGN 251
Query: 211 ---RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266
R+ +++ G ++ L ++K + P T G
Sbjct: 252 TNERMGLFSAFASQYSEASSAARGGDMGFIQAEQLPDALAAVVKNMPVGSLMGPIETPGG 311
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNT 293
+A+ +K+ + G A ++ +
Sbjct: 312 FSIVALLEKQQILGIDPKDAIVALKQI 338
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 180 IRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
++ + + P QN +++DA + K C +++ A KI + +
Sbjct: 335 LKQIYVNFPPGTSQNVADEKTAKLRDA----TKELKGCGSVDEIAHKI-GADVMSNDQIS 389
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPY-VTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295
+ P QN++ K Q +T P+ Q+GV + +C + D + + Q
Sbjct: 390 IRSMPPLLQNMVAKLQVGESTLPFGSIQEGVSVLVVCGRDDPKVAKQPNFQQIHNQLQED 449
Query: 296 KIEKHEAEYVKKLRSNAIIHY 316
++ K Y++ LR +AII Y
Sbjct: 450 RVNKRAIRYLRDLRRDAIIDY 470
>gi|123440995|ref|YP_001004984.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122087956|emb|CAL10744.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607170|emb|CBY28668.1| survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 434
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 103/283 (36%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDATLRHQILERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEDLAKKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ S+ + P + G + + D R G +
Sbjct: 239 LPSLFAERLQSASKGDVVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 31/242 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----- 147
V+ A+ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EDLAKKLVSDIKGGADFGKLAIANSADSQALKG---GQMGWGKLQELPS 241
Query: 148 -------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
V G +++ + K I+V E R +L + +
Sbjct: 242 LFAERLQSASKGDVVGPIRSGVGFHILKVNDIRGADKTISVTEVHARHILLK--PSPVMT 299
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLK 251
+ ++ A + + K S+ + G + P F++ L+K
Sbjct: 300 DDQARAKLTAAAADIKSGKANFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDALMK 359
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRS 310
+ + P + G I + D R + A + + + K + ++++ R+
Sbjct: 360 LQKGEISAPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQRA 419
Query: 311 NA 312
A
Sbjct: 420 AA 421
>gi|221234696|ref|YP_002517132.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
gi|220963868|gb|ACL95224.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
Length = 449
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 98/256 (38%), Gaps = 17/256 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALL----KLQKINGEL---EKIAVQELIVETLKKQEIE 91
S + +N ++I+ D+ +R+ LL +Q L E+ A++ LI E L+ QE++
Sbjct: 54 SESVAAVVNDDIISSYDLMQRMRLLMATSGMQPTQENLPQIEQEALRSLIDERLQMQELK 113
Query: 92 KSG------ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ I V A++ L E L QGIG + ++ L +S W
Sbjct: 114 RVEKQQKITIISTDKEVEEQIGDIAQSNRLQPEQLKQQLVAQGIGLDTWRAQLRAESSWQ 173
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++ + + E +I A ++++ + +Y I V +
Sbjct: 174 SWIQGRYGSRLRIGEDQIKAYQRRLADAAAKPQYQISEVFLDAARVGGMEVAVNGA-TQL 232
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263
+ + P +F+ + G+ ++ + ++ + L++ + P
Sbjct: 233 INQMQQGAP-FAAVARQFSGSATAANGGEVGWVSQGEMPTEVDAALEQLRPGQLSRPIQV 291
Query: 264 QKGVEYIAICDKRDLG 279
+ GV I + DKR
Sbjct: 292 KDGVYIIYLRDKRAGS 307
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ P + + K + + ++ C LE A+K+ + G +DL
Sbjct: 316 QVAAPLAADATEAQIAAATKQLVDLKPKI-TSCQSLEATAAKVDGLVAGDLGEAEITDLA 374
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
P FQ K + ++P T G+ IA+C KR G + + ++
Sbjct: 375 PAFQEAANKLEVGQISDPIRTDAGLHLIAVCGKRQGGANAPTHDQIENRLRGQQLALIAK 434
Query: 303 EYVKKLRSNAIIH 315
Y++ LR+ A I
Sbjct: 435 RYLRDLRNQATIE 447
>gi|330505263|ref|YP_004382132.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina NK-01]
gi|328919549|gb|AEB60380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina NK-01]
Length = 432
Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 111/289 (38%), Gaps = 19/289 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK--LQKINGELE------KIAVQELIVETLKKQEIE 91
R+ ++ +V+ + R+ ++ + K G L + ++ LI+E ++ Q +
Sbjct: 33 DRVVAIVDNDVVMQSQLDARLREVQQTIDKRGGALPPEHVLSQQVLERLIIENIQLQIGD 92
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+SGI +N A+ G+S E F L + G+ + + + I V +
Sbjct: 93 RSGIRITDEELNQAMGTIAQRNGMSLEQFRDALARDGLSYADARDQVRREMIISRVRQRR 152
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + E+ K E+ + +L + + ++ R +
Sbjct: 153 VAERIQVTDQEVQNFLASDLGKMQLSEEFRLANILIPVSEGASSSEIQAADRQAQELYQQ 212
Query: 210 LRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267
L+ D +L ++ + + G+ + L P F +++ + + T P T G
Sbjct: 213 LQQGADFGQLAVSRSASENALEGGEMGWRKAGQLPPPFDSMISQLNPGEATEPVRTPGGF 272
Query: 268 EYIAICDKRDLGGEIALK-----AYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +KR GG+ ++ ++ + + + E+ V++L
Sbjct: 273 IILKLIEKR--GGDTQVRDEVHVRHILIKPSEIRSEEETRRLVERLYQR 319
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/312 (11%), Positives = 94/312 (30%), Gaps = 59/312 (18%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + + +E+I+ ++++ + + I V F LS E
Sbjct: 122 RDALARDGLSYADARDQVRREMIISRVRQRRVAER-IQVTDQEVQNFLASDLGKMQLSEE 180
Query: 119 -DFSSFL------------DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP- 164
++ L Q L + + + + + E+
Sbjct: 181 FRLANILIPVSEGASSSEIQAADRQAQELYQQLQQGADFGQLAVSRSASENALEGGEMGW 240
Query: 165 -------------------------------------ANKQKMKNITVREYLIRTVLFSI 187
K+ E +R +L
Sbjct: 241 RKAGQLPPPFDSMISQLNPGEATEPVRTPGGFIILKLIEKRGGDTQVRDEVHVRHILIKP 300
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQ 245
+ + + + +R+ + R+ +D +L K S+ + G ++ + L P+
Sbjct: 301 SEIRSEEE---TRRLVERLYQRIVDGEDFAELAKSFSEDPGSALNGGDLNWIDPNALVPE 357
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAE 303
F+ ++ + + P+ + G + + +R + +A K ++
Sbjct: 358 FREVMNNTASGELSKPFKSPYGWHVLQVMGRRATDSSAQFREQQAANLLRNRKYDEELQA 417
Query: 304 YVKKLRSNAIIH 315
+++++R A +
Sbjct: 418 WLRQIRDEAYVE 429
>gi|213018605|ref|ZP_03334413.1| hypothetical protein C1A_378 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995556|gb|EEB56196.1| hypothetical protein C1A_378 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 365
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 11/210 (5%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIAL----LKLQKING-ELEKIAVQELIVET 84
++ + A I +NGE I++ DI +RI L QKIN E++ +++LI E
Sbjct: 1 MLPLRLLATEIEIVADVNGEPISNLDIERRINFINSLLGTQKINQKEVKSQILRQLIDEI 60
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ E +K I + +N + L A++ ++ K I N K+ + Q +
Sbjct: 61 IIVSEAQKMNIELSNEELNNAVTLFLTQSLKLKADEVDQYVKKHNIDLNTLKKQIKCQLL 120
Query: 144 WPDVVKNDFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
W +++ + + E+ A KQK K+ +YLI F IPD K+ + R
Sbjct: 121 WNKIIEVGVVPLINISDQEVDDARKQKEKS----DYLITFQEFIIPDQKIAEDLVKKLRT 176
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ ES +++ K L + K+ DV G
Sbjct: 177 SNNPESSIKMSKATVNLSQLKGKLKDVLEG 206
>gi|162420091|ref|YP_001605345.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Angola]
gi|162352906|gb|ABX86854.1| chaperone SurA [Yersinia pestis Angola]
Length = 434
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 102/276 (36%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ DI + + + Q
Sbjct: 1 MKNWRTLILGLVICANT--AFAAPQEVDKVAAVVDNGVVLQSDIDGLLQSVKMNAQQSGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDSTLRHQILERLIMDNIQLQMAKKMGITITDQALDKAIADIAAQNRMTLAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITV-REYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ ++ E +
Sbjct: 119 AADGLSYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQMGNQVSGDTELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + + ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPTQQQVDQAEDLANKLVADIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
L F L+ + + P + G + + D R
Sbjct: 239 LPSLFAERLQSAHKGEIVGPIRSGVGFHILKVNDMR 274
Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 72/244 (29%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ A L A+ DF K Q W +
Sbjct: 186 NPTQQQVDQA-EDLA--NKLVADIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ G +++ + + I+V E R +L + +
Sbjct: 240 PSLFAERLQSAHKGEIVGPIRSGVGFHILKVNDMRGADQTISVTEVNARHILLK--PSPM 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-L 249
+ +++ A + + K S+ + G+ + P F++ L
Sbjct: 298 MTDEQARAKLEAAAAEIKSGKTNFATIAKEISQDPGSAMQGGELGWASPDIYDPAFRDAL 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLKKGEISAPVHSSFGWHLIQLVDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|330863030|emb|CBX73162.1| chaperone surA [Yersinia enterocolitica W22703]
Length = 424
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 12/264 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GELEKIA 76
+ ++ + ++ ++ V+ D+ + + L Q L
Sbjct: 1 MVVCANTAFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQQVPDDATLRHQI 60
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ LI++ ++ Q +K GIT ++ A ++ S L G+ + +++
Sbjct: 61 LERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTPAQMRSRLAADGLNYDTYRE 120
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRTVLFSIPDNKLQN 194
+ + + +V N+ + L E+ KQ + E + +L +P+N Q
Sbjct: 121 QIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSHILIPLPENPSQQ 180
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLK-K 252
Q + + S ++ D KL S G+ + +L F L+
Sbjct: 181 QVDQAEDLAKKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQELPSLFAERLQSA 240
Query: 253 SQNNTTNPYVTQKGVEYIAICDKR 276
S+ + P + G + + D R
Sbjct: 241 SKGDVVGPIRSGVGFHILKVNDIR 264
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 61/195 (31%), Gaps = 24/195 (12%)
Query: 140 IQSIWPDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
Q W + V G +++ + K I+V E R
Sbjct: 219 GQMGWGKLQELPSLFAERLQSASKGDVVGPIRSGVGFHILKVNDIRGTDKTISVTEVHAR 278
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+L + + + ++ A + + K S+ + G +
Sbjct: 279 HILLK--PSPVMTDDQARAKLTAAAADIKSGKANFATIAKEISQDPGSAMQGGDLGWASP 336
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKI 297
P F++ L+K + + P + G I + D R + A + + + K
Sbjct: 337 DIYDPAFRDALMKLQKGEISAPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKF 396
Query: 298 EKHEAEYVKKLRSNA 312
+ ++++ R+ A
Sbjct: 397 AEEAQTWMQEQRAAA 411
>gi|37524613|ref|NP_927957.1| peptidyl-prolyl cis-trans isomerase SurA [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|81707805|sp|Q7N8V5|SURA_PHOLL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|36784037|emb|CAE12906.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase surA) (PPIase) (Rotamase C) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 433
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 95/258 (36%), Gaps = 12/258 (4%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIV 82
++ + +I +N V+ + DI+ R+ +K L ++ LI+
Sbjct: 17 TAFAAPQQMDKIAAVVNNGVVLESDINNRLQSVKRDAQHAGQQIPDEQTLRHQILERLII 76
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ + Q ++ GIT ++ A ++ + + G+ + ++ + +
Sbjct: 77 DNILLQMAKQMGITIPDQALDSTIANIAAQNHITVDQMKHRIAADGMNFDTYRDQIRKEM 136
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +V N+ + L EI A + +N E I +L +P+N Q Q
Sbjct: 137 LIAEVRNNEVRRRVTILPQEIDALVKQISNQNTNDTELNISHILIPLPENPDQAQMEKAM 196
Query: 201 RIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
+ S L+ D KL +++ + G + +L F L+ +Q
Sbjct: 197 TVVQKIMSELKHGVDFGKLAIAYSADPQALKGGNMGWSRLQELPTLFAEQLQLAQKGAVV 256
Query: 259 NPYVTQKGVEYIAICDKR 276
P + G + + D R
Sbjct: 257 GPIRSGVGFHILKVNDIR 274
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/360 (11%), Positives = 98/360 (27%), Gaps = 67/360 (18%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
++ L +L+ ++ A+ S I IT + RIA +
Sbjct: 70 ILERLIIDNILLQMAKQMGITIPDQALDSTIANIAAQNHITVDQMKHRIAADGM--NFDT 127
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------G 114
+E+++ ++ E+ + +T ++ Q +
Sbjct: 128 YRDQIRKEMLIAEVRNNEVRRR-VTILPQEIDALVKQISNQNTNDTELNISHILIPLPEN 186
Query: 115 LSAEDFSSFLD---------KQGIG-----------DNHFKQYLAIQSIWPDV------- 147
+ K G+ K W +
Sbjct: 187 PDQAQMEKAMTVVQKIMSELKHGVDFGKLAIAYSADPQALKG---GNMGWSRLQELPTLF 243
Query: 148 -----------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
V G +++ + I V E R +L + +
Sbjct: 244 AEQLQLAQKGAVVGPIRSGVGFHILKVNDIRGGNPTIAVTEVHARHILLRT--SPVMTDD 301
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQN-LLKKS 253
+ +++ D K S ++ + P F++ L++ +
Sbjct: 302 QARTKLQQIASDIRSGKTDFADAAKEFSDDPGSALRGGDLGWTAPDIYDPAFRDALMRLN 361
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + P + G I + D R + ++A K K + ++++ R++A
Sbjct: 362 KGEISQPVHSSFGWHLIQLLDTRKVDKTDVAQKDRAYRMLFNRKFTEEAQSWMQEQRASA 421
>gi|262275062|ref|ZP_06052873.1| peptidyl-prolyl cis-trans isomerase SurA [Grimontia hollisae CIP
101886]
gi|262221625|gb|EEY72939.1| peptidyl-prolyl cis-trans isomerase SurA [Grimontia hollisae CIP
101886]
Length = 432
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 88/247 (35%), Gaps = 10/247 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGEL------EKIAVQELIVETLKKQEIEKS 93
R+ +N VI DI + L L E+ + +LI+E L+ QE ++
Sbjct: 28 DRVVAVVNDGVILSSDIDALEKTVALNADQANLPPKDVLEQQILDQLILEELQLQEAKRL 87
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
GI D + A+ LS L + GI + ++ + + +
Sbjct: 88 GIRIDDTRLEQAINSIAKERNLSVSQLQERLKRNGISWSSYRDQIRREMTISEARNAQVR 147
Query: 154 LKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ L E+ A++ KN+ EY + + + + + + + + L+
Sbjct: 148 RRISILPQEVESLASQLNAKNLENVEYRLSHIQLRLNEGAEKEEREIVAETANRLVKELK 207
Query: 212 LPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEY 269
+D L + + G ++ ++ F + +K + P+ + G
Sbjct: 208 DGRDFAALALANSKGPKALQGGDWGWMRLEEMPTIFADQIKNNGKGAIIGPFRSGVGYHI 267
Query: 270 IAICDKR 276
+ I D +
Sbjct: 268 LKITDVK 274
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 57/151 (37%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+K++ V E R +L I + + + ++++ + K L K S
Sbjct: 275 GLKSVAVTEVKARHIL--IKPSIVLSDDGAKRQLNQMIAQIKKGEKSFEDLAKQYSADPG 332
Query: 229 VSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
++ G + P+F++ + + P+ T G + + D+R + A+
Sbjct: 333 SAVKGGDLGWQTSELYVPEFKDKVDTLPEGEISEPFKTVHGWHIVQVLDRRQADRTDTAM 392
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + ++++LR+ A +
Sbjct: 393 QNRAYGMLLNRKFNEEVQAWLQELRAGAYVE 423
>gi|207742369|ref|YP_002258761.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia
solanacearum IPO1609]
gi|206593759|emb|CAQ60686.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia
solanacearum IPO1609]
Length = 473
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 112/313 (35%), Gaps = 24/313 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q
Sbjct: 45 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARA 104
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 105 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLAQSGLA 164
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
+ +++ L + + + + K + EI A + +EY + +L +
Sbjct: 165 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPV 224
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
++ Q + ++ + + D KL + +S + + G+ L QF
Sbjct: 225 AEDASAEQKAAARGKAESLLKQAQGGADFAKLARDSSSGPEAAQGGELGLRSIGRLPTQF 284
Query: 247 QN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIE 298
N ++ + G + + DKR G + K ++ + PT
Sbjct: 285 ANAVVDLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSA 344
Query: 299 KHEAEYVKKLRSN 311
+ LR
Sbjct: 345 DDARRQLAGLRDR 357
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ V + +R +L + ++++ + + + +++
Sbjct: 319 GTAASAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFSDAARRYSQDTS 376
Query: 228 DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G+ ++ L P+F+ + + P +Q GV I + +RD + +
Sbjct: 377 ASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQPVQSQFGVHLIQVEGRRDAEVPVDRQR 436
Query: 287 -YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Y + K++ +++++LR +A + Y
Sbjct: 437 DYARSVIREQKVQAAYEDWLRQLRDSAHVEY 467
>gi|22127555|ref|NP_670978.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis KIM 10]
gi|45443417|ref|NP_994956.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis biovar
Microtus str. 91001]
gi|51594986|ref|YP_069177.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia
pseudotuberculosis IP 32953]
gi|108810533|ref|YP_646300.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Nepal516]
gi|145600395|ref|YP_001164471.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Pestoides
F]
gi|150260469|ref|ZP_01917197.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis CA88-4125]
gi|153949109|ref|YP_001402397.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia
pseudotuberculosis IP 31758]
gi|165928093|ref|ZP_02223925.1| chaperone SurA [Yersinia pestis biovar Orientalis str. F1991016]
gi|165937810|ref|ZP_02226371.1| chaperone SurA [Yersinia pestis biovar Orientalis str. IP275]
gi|166008803|ref|ZP_02229701.1| chaperone SurA [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212220|ref|ZP_02238255.1| chaperone SurA [Yersinia pestis biovar Antiqua str. B42003004]
gi|167422012|ref|ZP_02313765.1| chaperone SurA [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426071|ref|ZP_02317824.1| chaperone SurA [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167470553|ref|ZP_02335257.1| chaperone SurA [Yersinia pestis FV-1]
gi|170025786|ref|YP_001722291.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia
pseudotuberculosis YPIII]
gi|186893987|ref|YP_001871099.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia
pseudotuberculosis PB1/+]
gi|218927692|ref|YP_002345567.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis CO92]
gi|229836923|ref|ZP_04457088.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
Pestoides A]
gi|229840382|ref|ZP_04460541.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842462|ref|ZP_04462617.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
biovar Orientalis str. India 195]
gi|229900721|ref|ZP_04515845.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
Nepal516]
gi|270487908|ref|ZP_06204982.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27]
gi|294502589|ref|YP_003566651.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis Z176003]
gi|81691900|sp|Q66EQ7|SURA_YERPS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|121956556|sp|Q7CG87|SURA_YERPE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|121956562|sp|Q1CMT0|SURA_YERPN RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|21960659|gb|AAM87229.1|AE013971_5 survival protein [Yersinia pestis KIM 10]
gi|45438286|gb|AAS63833.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis biovar Microtus str. 91001]
gi|51588268|emb|CAH19875.1| peptidyl-prolyl cis-trans isomerase, survival protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774181|gb|ABG16700.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis Nepal516]
gi|115346303|emb|CAL19174.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis CO92]
gi|145212091|gb|ABP41498.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis Pestoides F]
gi|149289877|gb|EDM39954.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis CA88-4125]
gi|152960604|gb|ABS48065.1| chaperone SurA [Yersinia pseudotuberculosis IP 31758]
gi|165914222|gb|EDR32838.1| chaperone SurA [Yersinia pestis biovar Orientalis str. IP275]
gi|165919954|gb|EDR37255.1| chaperone SurA [Yersinia pestis biovar Orientalis str. F1991016]
gi|165992142|gb|EDR44443.1| chaperone SurA [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206966|gb|EDR51446.1| chaperone SurA [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960149|gb|EDR56170.1| chaperone SurA [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167054994|gb|EDR64794.1| chaperone SurA [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752320|gb|ACA69838.1| SurA domain [Yersinia pseudotuberculosis YPIII]
gi|186697013|gb|ACC87642.1| SurA domain protein [Yersinia pseudotuberculosis PB1/+]
gi|229682060|gb|EEO78152.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
Nepal516]
gi|229690772|gb|EEO82826.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696748|gb|EEO86795.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229705866|gb|EEO91875.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Yersinia pestis
Pestoides A]
gi|262360619|gb|ACY57340.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis D106004]
gi|262364565|gb|ACY61122.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis D182038]
gi|270336412|gb|EFA47189.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27]
gi|294353048|gb|ADE63389.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis Z176003]
gi|320016865|gb|ADW00437.1| peptidyl-prolyl cis-trans isomerase C [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 434
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 102/276 (36%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ DI + + + Q
Sbjct: 1 MKNWRTLILGLVICANT--AFAAPQEVDKVAAVVDNGVVLQSDIDGLLQSVKMNAQQSGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDSTLRHQILERLIMDNIQLQMAKKMGITITDQALDKAIADIAAQNRMTLAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITV-REYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ ++ E +
Sbjct: 119 AADGLSYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQMGNQVSGDTELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + + ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPTQQQVDQAEDLANKLVADIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
L F L+ + + P + G + + D R
Sbjct: 239 LPSLFAERLQSAHKGEIVGPIRSGVGFHILKVNDMR 274
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ A L A+ DF K Q W +
Sbjct: 186 NPTQQQVDQA-EDLA--NKLVADIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ G +++ + + I+V E R +L + +
Sbjct: 240 PSLFAERLQSAHKGEIVGPIRSGVGFHILKVNDMRGADQTISVTEVNARHILLK--PSPM 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-L 249
+ +++ A + K S+ + G+ + P F++ L
Sbjct: 298 MTDEQARAKLEAAAAEIKSGKTSFATIAKEISQDPGSAMQGGELGWASPDIYDPAFRDAL 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLKKGEISAPVHSSFGWHLIQLVDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|34499685|ref|NP_903900.1| survival protein surA [Chromobacterium violaceum ATCC 12472]
gi|81711632|sp|Q7NQB0|SURA_CHRVO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|34105536|gb|AAQ61890.1| survival protein surA precursor [Chromobacterium violaceum ATCC
12472]
Length = 429
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 113/314 (35%), Gaps = 14/314 (4%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLKLQKIN 69
K L + + RI +N VIT ++ R I L+ QK+
Sbjct: 3 KTLLALLIASVMQSALAAPATPVREVDRIVAVVNKNVITWQELQARVNEAIKQLEAQKVA 62
Query: 70 GELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ ++++I E ++ Q G+ + V+ A+ LS + L
Sbjct: 63 PPPREVLERQVLEQMITEEVQLQYAASGGLRIEDAAVDQAVANLAKQNKLSEAGLKAQLA 122
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
K GI + + + + + ++ + + E+ + ++ EY + ++L
Sbjct: 123 KDGITLDRLRADIRRELTISRLRDSEVASRVNVSDSEVDQAMKSAQSANRTEYHLASILV 182
Query: 186 SIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
++P+ Q + +++ A+ ++ + + G + + L
Sbjct: 183 AVPERADAKQIDQLSQKVHKAQADLAAGQPFAKVSAAYSDAPNALKGGDMGWRSATSLPQ 242
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY----LSAQNTPTKIEK 299
+F LL++ + T+ TQ+G + DKR G + ++ Y + + E
Sbjct: 243 EFVQLLEQMKVGADTDVIRTQQGFFIFKLVDKRSGGAPMMVEQYHPRHILIRTNEAVSEA 302
Query: 300 HEAEYVKKLRSNAI 313
+ ++R +
Sbjct: 303 DAKARIDQVRDRIM 316
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 95/300 (31%), Gaps = 59/300 (19%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL-----DK 126
L +EL + L+ E+ + + V+ + A++ + +S L
Sbjct: 131 LRADIRRELTISRLRDSEVASR-VNVSDSEVDQAM-KSAQSANRTEYHLASILVAVPERA 188
Query: 127 QGIGDNHFKQYLA----------------------------IQSIWP-------DVVKND 151
+ Q + W + V+
Sbjct: 189 DAKQIDQLSQKVHKAQADLAAGQPFAKVSAAYSDAPNALKGGDMGWRSATSLPQEFVQLL 248
Query: 152 FMLKYGNLEMEIPANKQ-----------KMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+K G I + + V +Y R +L N+ ++ +
Sbjct: 249 EQMKVGADTDVIRTQQGFFIFKLVDKRSGGAPMMVEQYHPRHILIRT--NEAVSEADAKA 306
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
RI + +R K + + ++ + G ++ DL P+F+ + +
Sbjct: 307 RIDQVRDRIMRGAKFADMAKLYSEDGSNAKGGDLGWVNMGDLVPEFEKAMVSLPIGQVSQ 366
Query: 260 PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
P T G I + KR D+ + K + Q K+E+ ++V++LR +A + +
Sbjct: 367 PVRTPFGWHLILVEGKRNQDVSSDH-EKMAVKQQIRARKMEQAYTDWVRQLRDSAFVEEH 425
>gi|83749338|ref|ZP_00946335.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551]
gi|83724016|gb|EAP71197.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551]
Length = 495
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 112/313 (35%), Gaps = 24/313 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q
Sbjct: 67 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARA 126
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 127 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLAQSGLA 186
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
+ +++ L + + + + K + EI A + +EY + +L +
Sbjct: 187 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPV 246
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
++ Q + ++ + + D KL + +S + + G+ L QF
Sbjct: 247 AEDASAEQKAAARGKAESLLKQAQGGADFAKLARDSSSGPEAAQGGELGLRSIGRLPTQF 306
Query: 247 QN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIE 298
N ++ + G + + DKR G + K ++ + PT
Sbjct: 307 ANAVVDLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSA 366
Query: 299 KHEAEYVKKLRSN 311
+ LR
Sbjct: 367 DDARRQLAGLRDR 379
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ V + +R +L + ++++ + + + +++
Sbjct: 341 GTAASAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFSDAARRYSQDTS 398
Query: 228 DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G+ ++ L P+F+ + + P +Q GV I + +RD + +
Sbjct: 399 ASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQPVQSQFGVHLIQVEGRRDAEVPVDRQR 458
Query: 287 -YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Y + K++ +++++LR +A + Y
Sbjct: 459 DYARSVIREQKVQAAYEDWLRQLRDSAHVEY 489
>gi|262172454|ref|ZP_06040132.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus MB-451]
gi|261893530|gb|EEY39516.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus MB-451]
Length = 431
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+KL + +I + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPQQLDSVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE E+ G+ D N +N + A+N + E S +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + + + +++ + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVEEGQDKSEAES---LANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFIQRIKNGEATFGELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIEILPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|269960923|ref|ZP_06175293.1| survival protein SurA [Vibrio harveyi 1DA3]
gi|269834363|gb|EEZ88452.1| survival protein SurA [Vibrio harveyi 1DA3]
Length = 427
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LE 73
L+ ++ + ++ +N VI DI+ + L+ L+
Sbjct: 7 LLFTTLLSCGVTAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGKSLPSASVLK 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
V++LI++TL+ QE E+ G+ D N +N + ARN S E ++ + +G+
Sbjct: 67 DQVVEKLIIDTLQGQEAERIGVRIDDNRLNQAIAEIARNNNQSVEQLAASVQAEGLSYPE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNK 191
F++ + + + + L E+ A++ + +Y I + D+K
Sbjct: 127 FREQIRKEIAASEARNALVRRRINILPAEVDSLADQLATETNATVQYKIGHIQLRFSDDK 186
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+++ + +A +L+ D +++ ++ + G ++ + ++ F + +
Sbjct: 187 DKSEVEAE---ANALVKKLKDGADFSEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQI 243
Query: 251 K-KSQNNTTNPYVTQKGVEYIAICDKR 276
K +++ + P+ + G + + D +
Sbjct: 244 KMQNKGSIIGPFRSGIGFHILKVEDVK 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 71/192 (36%), Gaps = 15/192 (7%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G +++ K ++ + V E R +L P
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGIGFHILKVEDVK-GLETVAVTEVNARHILIK-PTV 291
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQ 245
L ++G K+ E R+ + A++ G+ Y P+
Sbjct: 292 ILSDEGA----QKELNEFIRRIKAGEATFAQLATQYSQDPGSAAQNGELGYQTPDLYVPE 347
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAE 303
F++ ++ + + P+ T G + + D+R + + A+K K +
Sbjct: 348 FKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGA 407
Query: 304 YVKKLRSNAIIH 315
++++LR++A +
Sbjct: 408 WMQELRASAFVE 419
>gi|207727966|ref|YP_002256360.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia
solanacearum MolK2]
gi|206591209|emb|CAQ56821.1| peptidyl-prolyl cis-trans isomerase (rotamase c) protein [Ralstonia
solanacearum MolK2]
Length = 473
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 109/313 (34%), Gaps = 24/313 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q
Sbjct: 45 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARA 104
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 105 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLAQSGLA 164
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
+ +++ L + + + + K + EI A + +EY + +L +
Sbjct: 165 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPV 224
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQF 246
++ Q + + + + D KL + +S G+ L QF
Sbjct: 225 AEDASAEQKAAARGKAENLLKQAQGGADFAKLARDNSSGPEAAQGGELGLRSIGRLPTQF 284
Query: 247 QN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIE 298
N ++ + G + + DKR G + K ++ + PT
Sbjct: 285 ANAVVDLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSA 344
Query: 299 KHEAEYVKKLRSN 311
+ LR
Sbjct: 345 DDARRQLAGLRDR 357
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ V + +R +L + ++++ + + + +++
Sbjct: 319 GTAASAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFSDAARRYSQDTS 376
Query: 228 DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G+ ++ L P+F+ + + P +Q GV I + +RD + +
Sbjct: 377 ASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQPVQSQFGVHLIQVEGRRDAEVPVDRQR 436
Query: 287 -YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Y + K++ +++++LR +A + Y
Sbjct: 437 DYARSVIREQKVQAAYEDWLRQLRDSAHVEY 467
>gi|146309025|ref|YP_001189490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina ymp]
gi|145577226|gb|ABP86758.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina ymp]
Length = 430
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 100/261 (38%), Gaps = 14/261 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK--LQKINGELE------KIAVQELIVETLKKQEIE 91
R+ ++ +V+ + R+ ++ + K G L + ++ LI+E ++ Q E
Sbjct: 31 DRVVAIVDNDVVMQSQLDARLREVQQTIDKRGGALPPEHVLSQQVLERLIIENIQLQIGE 90
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+SGI +N A+ G+S E F L + G+ + + + I V +
Sbjct: 91 RSGIRITDEELNQAMGTIAQRNGMSLEQFRQALARDGLSYADARDQVRREMIISRVRQRR 150
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + E+ K E+ + +L + + ++ R +
Sbjct: 151 VAERIQVTDQEVQNFLASDLGKMQLSEEFRLANILIPVSEGASSSEIQAADRQARELYQQ 210
Query: 210 LRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV 267
L+ D +L ++ + G+ + L P F +++ + + T P T G
Sbjct: 211 LQQGADFAQLAISRSASETALEGGEMGWRKAGQLPPPFDSMISQLNPGEVTEPVRTPGGF 270
Query: 268 EYIAICDKRDLGGEIALKAYL 288
+ + +KR GG+ ++ +
Sbjct: 271 IILKLIEKR--GGDTQVRDEV 289
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ E +R +L + + + +R+ + R+ +D +L K S+
Sbjct: 277 EKRGGDTQVRDEVHVRHILIKPSEIRSPEE---TRRLVERLYQRIVAGEDFAELAKSFSE 333
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + L P+F+ ++ ++ + P+ TQ G + + +R
Sbjct: 334 DPGSALNGGDLNWIDPNALVPEFRQVMSETASGELSKPFQTQFGWHVLQVMGRRATDSSA 393
Query: 283 ALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
+ +A K ++ +++++R A +
Sbjct: 394 QFREQQAANLLRNRKYDEELQAWLRQIRDEAYVE 427
>gi|296161011|ref|ZP_06843822.1| SurA domain protein [Burkholderia sp. Ch1-1]
gi|295888710|gb|EFG68517.1| SurA domain protein [Burkholderia sp. Ch1-1]
Length = 453
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 103/276 (37%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
F+ + +S S I +N VIT ++ +R+ L+ +
Sbjct: 21 SFLSVAPVQAQALSGSSGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMD 80
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ GI D TV + A L+ + + S ++ QG+
Sbjct: 81 QLRQQVLNQMVLERIQLQKAKEDGINIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVP 140
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
+ F + + + + K + E+ A+++ + ++ +
Sbjct: 141 WSTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKA 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P N + +R A + + + KL K S+ D S G ++ S L P+F
Sbjct: 201 PLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEF 260
Query: 247 -QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
+ T G E + + D+R G
Sbjct: 261 VKAASTLRPGEINPDLIRTNDGFEIVRLVDRRTGQG 296
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 68/180 (37%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L I PD+++ + + L + + +R +L + ++
Sbjct: 267 LRPGEINPDLIRTNDGFEIVRLVDRRTGQGTSSDAPKLVQTHVRHILLRV--GDGMSEPQ 324
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + + ++ G ++ + P+F+ + Q
Sbjct: 325 ARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQ 384
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + +R+ G +A + L+ Q K E+ A+++++LR A +
Sbjct: 385 ISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 444
>gi|291612516|ref|YP_003522673.1| SurA domain protein [Sideroxydans lithotrophicus ES-1]
gi|291582628|gb|ADE10286.1| SurA domain protein [Sideroxydans lithotrophicus ES-1]
Length = 433
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/316 (16%), Positives = 121/316 (38%), Gaps = 18/316 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIA----LLKLQKI 68
K + F+++ + + A S RI +N +VIT ++ R+A +L+ QK
Sbjct: 4 KKIFALFLIVFATVASAAESQKQATSLDRIDVIVNDDVITHRELENRVASVTKMLQRQKT 63
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
LE+ ++ +I E L Q ++SG+ D ++ ++ A+ F +
Sbjct: 64 ALPEKSILERQVLERMITEMLLAQYAKESGLRIDDGQLDKTILRIAQQNKFPDVAAFRAK 123
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIR 181
L + G N F++ + + I + + + K E +I N Q + E +
Sbjct: 124 LTRDGTDYNEFREEIRNEIIAVRLREREVDSKLVISENDIDNYLNNQAHQEGKGEELQLS 183
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLES 240
+L +P+ ++ + + ++LR ++ S D G+ +
Sbjct: 184 HILVVVPEQATADKIQSYRDRAEQALAKLRAGAPFAQVAAGYSDAQDALKGGELGWRPAD 243
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPT 295
L P F L+K + ++ + G I + D+R + ++ + +
Sbjct: 244 RLPPLFAEALQKMKPGDLSDVLRSPSGFHIIKLLDRRSNDAPVVITQTHARHILIKTSEL 303
Query: 296 KIEKHEAEYVKKLRSN 311
+ +++++
Sbjct: 304 VTDSEAKSRLQEIKQR 319
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 56/154 (36%), Gaps = 4/154 (2%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + + + R +L + L + R+++ ++ + + ++
Sbjct: 279 RRSNDAPVVITQTHARHILIKTSE--LVTDSEAKSRLQEIKQRIDKGASFAEQARLYSED 336
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G +L + P+F++ + + + T G I + ++R+ +
Sbjct: 337 GSAPQGGDLGWLSPGETVPEFESAMNALKVGQVSGLVQTGFGWHLIQVLERRNTDVSVEQ 396
Query: 285 KAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K K ++ +++++LR A + Y+
Sbjct: 397 KRQRARNAIRTVKSDEAFQDWLRQLRDRAFVEYH 430
>gi|237746912|ref|ZP_04577392.1| chaperone SurA [Oxalobacter formigenes HOxBLS]
gi|229378263|gb|EEO28354.1| chaperone SurA [Oxalobacter formigenes HOxBLS]
Length = 468
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 111/290 (38%), Gaps = 17/290 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI------NGEVITDGDISKRI 60
+ L+ + LL + ++ A + + N +VIT G++++RI
Sbjct: 13 SVLNWAVTLLFGFACSTCVLAQTEKPVQAPAQAPKPVVVDAIAAVVNNDVITMGELNERI 72
Query: 61 ALL--KLQKIN------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
++ +LQK N EL+K ++ +IVE+ + Q ++ G+ D ++ + A +
Sbjct: 73 QMIESQLQKQNVNLPPRAELQKQVLEHMIVESAQMQLAKEMGLRIDDTQLDRTIARIAES 132
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
++ F ++++ G ++ + + + + + K + E+
Sbjct: 133 KHMTVPQFQQYIERDGTSFESHREKIRSEITMQRLRDREVVNKIQINDAEVDHLLGADSQ 192
Query: 173 ITVRE-YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVS 230
+ + E + +L IP+N Q ++ + L+ D ++ +S
Sbjct: 193 MQMPEQVRLGHILIRIPENASPEQIAEKRERAEKVLQILQSGGDFQQNAASYSDADEGLS 252
Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
G + L F + L+ N T + G + + DKR +
Sbjct: 253 GGDIGWRSTDRLPKIFADALVGVKPGNITGIIKSPNGFHILKVLDKRSMS 302
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 57/149 (38%), Gaps = 11/149 (7%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--- 230
V++ R +L + ++ + + + R+ D E+ A + +
Sbjct: 316 AVQQIHARHILIKVNQLVSADEA-----KRKLLDLKQRIQNDSASFEELAKTYSNDTSAS 370
Query: 231 -IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G ++ D P+F+ L+ + P TQ G I + DK+ + K
Sbjct: 371 RGGDLGWIYPGDTVPEFEKALVSLQPGEISEPVETQFGFHLIQVLDKKTDDVSLERKRIA 430
Query: 289 SAQ-NTPTKIEKHEAEYVKKLRSNAIIHY 316
+ Q KI + E++++LR A + Y
Sbjct: 431 AKQALRERKIAEATEEWLRQLRDRAYVEY 459
>gi|108810078|ref|YP_653994.1| peptidyl-prolyl cis-trans isomerase SurA [Yersinia pestis Antiqua]
gi|167401555|ref|ZP_02307049.1| chaperone SurA [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|121956548|sp|Q1C0H3|SURA_YERPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|108781991|gb|ABG16049.1| survival protein SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Yersinia pestis Antiqua]
gi|167048937|gb|EDR60345.1| chaperone SurA [Yersinia pestis biovar Antiqua str. UG05-0454]
Length = 434
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 103/276 (37%), Gaps = 14/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKI- 68
+K T + ++ C ++ + ++ ++ V+ DI + + + Q
Sbjct: 1 MKNWRTLILGLVICANT--AFAAPQEVDKVAAVVDNGVVLQSDIDGLLQSVKMNAQQSGL 58
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ L ++ LI++ ++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDSTLRHQILERLIMDNIQLQMAKKMGITITDQALDKAIADIAAQNRMTLAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITV-REYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ ++ E +
Sbjct: 119 AADGLSYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQMGNQVSGDTELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + + ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPTQQQVDQAEDLANKLVADIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
L F L+ + + P + G + + D R
Sbjct: 239 LPSLFAERLQSAHKGEIVGPIRSGVGFHILKVNDMR 274
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ A L A+ DF K Q W +
Sbjct: 186 NPTQQQVDQA-EDLA--NKLVADIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ G +++ + + I+V E R +L + +
Sbjct: 240 PSLFAERLQSAHKGEIVGPIRSGVGFHILKVNDMRGADQTISVTEVNARHILLK--PSPM 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-L 249
+ +++ A + K S+ + G+ + P F++ L
Sbjct: 298 MTDEQARAKLEAAAAEIKSGKTSFATIAKEISQDPGSAMQGGELGWASPDIYDPAFRDAL 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLKKGEISAPVHSSFGWHLIQLVDTRQVDKTDAAQKERAYRMLFNRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|258627055|ref|ZP_05721853.1| survival protein SurA [Vibrio mimicus VM603]
gi|258580729|gb|EEW05680.1| survival protein SurA [Vibrio mimicus VM603]
Length = 431
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+KL + +I + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPEQLDGVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE E+ G+ D N +N + A+N + E S +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + + + +++ + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVEEGQDKSEAES---LANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEATFGELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIEILPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|122070617|sp|Q5P7I9|SURA_AZOSE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 439
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/324 (14%), Positives = 121/324 (37%), Gaps = 25/324 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR--------IRTTINGEVITDGDISKRI--AL 62
++ +++ L++F + + A ++ I +N EVIT ++ +R+ A+
Sbjct: 1 MRRISSRLSLVLFAALSCATALFPAHAANPRSVEVDHIAAVVNNEVITARELRERVEQAI 60
Query: 63 LKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+L + LE+ ++ L++E + Q ++ + D T+ + A + L+
Sbjct: 61 HQLNRQGTPQPPADVLERQLLERLVLERAQLQLARETSLQVDEATLERAIARIAESNRLT 120
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-TV 175
+ L+K G+ + F+ + + + + + + + + E+ + +
Sbjct: 121 IAQLQAALEKDGVSWSRFRDNIRTEILLTRLREREVDNRIVVTDAEVDNFLANNADALSG 180
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKA 234
E+ + +L +P+ Q Q + + RL D ++ S D + G
Sbjct: 181 EEFELAHILIRVPEAATQQQMAGLVARAETAKQRLNSGDDFARVAASYSDAPDAMNGGAL 240
Query: 235 QYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG------EIALKAY 287
+ L P F ++ S + + + G+ + + D+R E +
Sbjct: 241 GWRSRDRLPPLFAEAVRELSPGSVSPVLRSSAGLHIVKLLDRRGGAAAGPQQLEQTRARH 300
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311
+ + + + + LR
Sbjct: 301 ILIRTSEILNDSEAESRLLGLRER 324
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 6/143 (4%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ R +L + + N + R+ E + + ++ + G +
Sbjct: 295 QTRARHILIRTSE--ILNDSEAESRLLGLRERVVNGASFAELAKAHSADLSSAKGGDLGW 352
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNT 293
L D P+F+ + + P + G I + +R D+ E +
Sbjct: 353 LSPGDTVPEFERTMNALKPGEVSAPVRSPFGWHLIQVEARRLQDVSDER-KRNAARNALR 411
Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316
K ++ +++++LR + Y
Sbjct: 412 ERKADEAFEDWLRQLRDRTYVEY 434
>gi|258623407|ref|ZP_05718411.1| survival protein SurA [Vibrio mimicus VM573]
gi|258584373|gb|EEW09118.1| survival protein SurA [Vibrio mimicus VM573]
Length = 431
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+KL + +I + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVISALTLFNAHAEPEQLDGVAVIVNSGVILQSDVDGALKTVKANAKQNNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE E+ G+ D N +N + A+N + E S +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKNNQQTQEQLISSV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + + + +++ + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVEEGQDKSKAES---LANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEATFGELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIEILPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|238797487|ref|ZP_04640985.1| Chaperone surA [Yersinia mollaretii ATCC 43969]
gi|238718628|gb|EEQ10446.1| Chaperone surA [Yersinia mollaretii ATCC 43969]
Length = 434
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 104/283 (36%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT ++ A ++ S L
Sbjct: 59 QVPDDATLRHQILERLIMDNIQLQMAKKMGITVSDEALDKAIADIAAQNRMTTAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSADAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEELANKLVSDIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + + P + G + + D R G +
Sbjct: 239 LPSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ + A L ++ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EELA--NKLVSDIKGGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
V G +++ + K ++V E R +L + +
Sbjct: 240 PSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEVHARHILLK--PSPV 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN-L 249
+ ++ A + K S+ ++ G + P F++ L
Sbjct: 298 MTDDQARAKLTAAAADIKSGKATFANIAKEISQDPGSAVQGGDLGWASPDIYDPAFRDAL 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLQKGEISAPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|289209139|ref|YP_003461205.1| peptidylprolyl isomerase [Thioalkalivibrio sp. K90mix]
gi|288944770|gb|ADC72469.1| Peptidylprolyl isomerase [Thioalkalivibrio sp. K90mix]
Length = 475
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 101/292 (34%), Gaps = 16/292 (5%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVETLKKQ 88
+ RI + +V+T ++ +R+ L+ Q L + ++ LIVE ++ Q
Sbjct: 68 QFTDRILAVVGDDVVTQRELVERMNLVAQQMMERGTRPPDRDTLARQVMERLIVERVQLQ 127
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E ++ GI D T+N AR ++ L + G+ N F++ + + +
Sbjct: 128 EAQRVGINIDEMTLNRAMENIARENRMTLPQLRQALLQDGVDFNAFREQIRNELTVNQLQ 187
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + EI Y I + S+P Q +
Sbjct: 188 RRQVDNQIRVSDQEIADLIASESGAIDRGVRYRIAHIQVSLPRGADSGQIATAREKAREL 247
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQ 264
R+R +D + S D G + ++ F + + ++ +
Sbjct: 248 RQRVREGEDFASVAISESDAPDALEGGDLGWRTAGEIPSVFAREAVLMRTGEISDVLRSP 307
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G + + D+ GG+ ++ ++ ++ ++ R A Y
Sbjct: 308 NGFHIMKLVDRE--GGDQTRVRQTQVRHILISPDQVRSD--EEARRQAESLY 355
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+++ VR+ +R +L S + + +R ++ +R+R D L + S
Sbjct: 317 DREGGDQTRVRQTQVRHILISPDQVRSDEEA---RRQAESLYNRIREGSDFEALARANSD 373
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL-GGE 281
+ G+ ++ +L P+F+ + + P +Q G I + D R++
Sbjct: 374 DPGSAAQGGQLGWISPGELVPEFEEAMNALQPGEISEPVESQFGWHIIEVLDHREVDTSR 433
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++A K E+ ++++LR A + Y
Sbjct: 434 EQIRARAREILQNRKREEEIELWMRRLRDEAYVEY 468
>gi|261209784|ref|ZP_05924089.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC341]
gi|260841174|gb|EEX67687.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC341]
Length = 431
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 109/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL T + +I + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKTTLISVISMLTLFNAHAEPQQLDGVAVIVNSGVILQSDVDGALKTVKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQESVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + + + +++ + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVEEGQDKSEAES---LANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D R
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVR 273
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I + + ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKID-DVRGLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDDGAQKQLSEFVQRIKNGEVSFGELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R + + ALK K + + +++
Sbjct: 354 QVETLPVGQISEPFKTVHGWHIVEVLDRRQVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|119899176|ref|YP_934389.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72]
gi|119671589|emb|CAL95502.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72]
Length = 439
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 111/315 (35%), Gaps = 17/315 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE 71
+ L V +P+ + RI +N EVIT + R+ +LQ+ +
Sbjct: 9 RSLFVALVACSALALPVRAAVQPVAVDRIIAVVNNEVITAVQLRDRVDQTTRQLQRQGVQ 68
Query: 72 L------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L E+ ++ LIVE + Q S + D T+ + A N ++ + L+
Sbjct: 69 LPPADVLERQLLERLIVERAQLQLARDSSLRVDDATLERAIGRIAENNKMNTTQLRAALE 128
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVL 184
+ G+ + F+ + + + + + + K + E+ + E+ + +L
Sbjct: 129 RDGVAWDRFRNEIRTEILLSRLREREVDAKIVVTDAEVDNFLTSNPDAFSGEEFHVAHIL 188
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLH 243
P+ Q ++ D +RLR +D ++ +S D S G + L
Sbjct: 189 LRAPEGATPEQIDRLRQRADTVINRLRNGEDFARVAADSSDAPDGISGGDLGWRQRDRLP 248
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG------EIALKAYLSAQNTPTK 296
+ + + + + G+ + + D+R E ++ + +
Sbjct: 249 ALYSDAVRDLRPGELSPLMRSAAGLHLVKLVDRRGGAAAGPQRLEQTRARHILIKTSAVL 308
Query: 297 IEKHEAEYVKKLRSN 311
+ + LR
Sbjct: 309 SDAEAEARLLGLRER 323
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 57/174 (32%), Gaps = 19/174 (10%)
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+V G +E + R +L + + + + R+
Sbjct: 277 KLVDRRGGAAAGPQRLE--------------QTRARHILIKT--SAVLSDAEAEARLLGL 320
Query: 206 EESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVT 263
E + D +L K +S + G ++ D P+F+ + + P +
Sbjct: 321 RERVVAGGADFGELAKASSADLSAAKGGDLGWVNPGDTVPEFERAMNVLKPGEVSPPVRS 380
Query: 264 QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G I + ++R + + K E+ ++V++LR + + Y
Sbjct: 381 PFGWHLIQVLERRQQDVTDERKRMAARNILRERKAEEAYEDWVRQLRDSTYVEY 434
>gi|56476034|ref|YP_157623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum
aromaticum EbN1]
gi|56312077|emb|CAI06722.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum
aromaticum EbN1]
Length = 454
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/324 (14%), Positives = 121/324 (37%), Gaps = 25/324 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR--------IRTTINGEVITDGDISKRI--AL 62
++ +++ L++F + + A ++ I +N EVIT ++ +R+ A+
Sbjct: 16 LRRISSRLSLVLFAALSCATALFPAHAANPRSVEVDHIAAVVNNEVITARELRERVEQAI 75
Query: 63 LKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+L + LE+ ++ L++E + Q ++ + D T+ + A + L+
Sbjct: 76 HQLNRQGTPQPPADVLERQLLERLVLERAQLQLARETSLQVDEATLERAIARIAESNRLT 135
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-TV 175
+ L+K G+ + F+ + + + + + + + + E+ + +
Sbjct: 136 IAQLQAALEKDGVSWSRFRDNIRTEILLTRLREREVDNRIVVTDAEVDNFLANNADALSG 195
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKA 234
E+ + +L +P+ Q Q + + RL D ++ S D + G
Sbjct: 196 EEFELAHILIRVPEAATQQQMAGLVARAETAKQRLNSGDDFARVAASYSDAPDAMNGGAL 255
Query: 235 QYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG------EIALKAY 287
+ L P F ++ S + + + G+ + + D+R E +
Sbjct: 256 GWRSRDRLPPLFAEAVRELSPGSVSPVLRSSAGLHIVKLLDRRGGAAAGPQQLEQTRARH 315
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311
+ + + + + LR
Sbjct: 316 ILIRTSEILNDSEAESRLLGLRER 339
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 6/143 (4%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ R +L + + N + R+ E + + ++ + G +
Sbjct: 310 QTRARHILIRTSE--ILNDSEAESRLLGLRERVVNGASFAELAKAHSADLSSAKGGDLGW 367
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNT 293
L D P+F+ + + P + G I + +R D+ E +
Sbjct: 368 LSPGDTVPEFERTMNALKPGEVSAPVRSPFGWHLIQVEARRLQDVSDER-KRNAARNALR 426
Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316
K ++ +++++LR + Y
Sbjct: 427 ERKADEAFEDWLRQLRDRTYVEY 449
>gi|254251452|ref|ZP_04944770.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa
AUO158]
gi|124894061|gb|EAY67941.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa
AUO158]
Length = 454
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 114/300 (38%), Gaps = 22/300 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R++L+ +LQ+ N L + ++++E +
Sbjct: 36 QGAQLADEVVAVVNNDVITGRELDQRVSLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + + L+ QG+ N F + +
Sbjct: 96 QVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRARLEAQGVPWNIFTNDARTELMLS 155
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q + ++
Sbjct: 156 KLREREVDSKITVSDAEVANYIASQRGPNAAQQQDLRFQHIFIKAPTNAPQTEIEAAQKK 215
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNP 260
+A + D KL + S+ +D G + L P Q K
Sbjct: 216 AEALLQQAMSGADFEKLARNNSEANDAKKGGDLGFKSPGALPPDVVQAASKLRPGQVNPT 275
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E + + D+R G A ++ + K E + + +R
Sbjct: 276 LIRVPDGFEIVRLVDRRPSQGATAAAPKIVQTHVRHILIRVGEGKSEGQARQELLDIRKQ 335
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 71/183 (38%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L P+ + + +R +L + + K ++
Sbjct: 265 SKLRPGQVNPTLIRVPDGFEIVRLVDRRPSQGATAAAPKIVQTHVRHILIRVGEGK--SE 322
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
G ++ + D + ++ G ++ + P+F+ + Q
Sbjct: 323 GQARQELLDIRKQIEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQD 382
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + D+R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 383 GQISQPVRTEYGYHLIQVLDRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 442
Query: 314 IHY 316
+ Y
Sbjct: 443 VQY 445
>gi|307728470|ref|YP_003905694.1| SurA domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583005|gb|ADN56403.1| SurA domain protein [Burkholderia sp. CCGE1003]
Length = 468
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 106/276 (38%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE----- 71
FV + ++ I +N VIT ++ +R+ L+ +L + N
Sbjct: 36 SFVSVAPVQAQALAGNRGQTVDTIAAVVNNGVITRRELDERVGLIARRLNQQNAPVPPAD 95
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ GI D V + A+ +S + + + ++ QG+
Sbjct: 96 QLRQQVLNQMVLERIQLQKAKEVGINIDDAAVQKTLERLAQANNMSLDTYRARIEAQGVP 155
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
F + + + + K + E+ A+++ + ++ +
Sbjct: 156 WATFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHMQHIFLKA 215
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF 246
P N Q ++ +A + + + KL K S+ D G Y S L P+F
Sbjct: 216 PLNAPQTDIEAAQKKAEALLAEAKGGANFEKLAKSNSQAPDAGKGGDMGYASPSKLPPEF 275
Query: 247 QNLLKKSQNNTTNPYV--TQKGVEYIAICDKRDLGG 280
+ NP V T G E + + D+R G
Sbjct: 276 VKAASSLRPGQVNPEVIRTNDGFEIVRLVDRRTGQG 311
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 69/180 (38%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L + P+V++ + + L + + +R +L + ++
Sbjct: 282 LRPGQVNPEVIRTNDGFEIVRLVDRRTGQGTSSDAPKLMQTHVRHILLRV--GDGMSEPQ 339
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + + ++ G ++ + P+F+ + Q
Sbjct: 340 ARQKLLEIKREIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNTLQDGQ 399
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + ++R+ G IA + L+ Q K E+ A+++++LR A +
Sbjct: 400 ISDPVRSEYGYHLIQVLERREAQGSIAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 459
>gi|88810558|ref|ZP_01125815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis
Nb-231]
gi|88792188|gb|EAR23298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis
Nb-231]
Length = 430
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 104/305 (34%), Gaps = 13/305 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKI------NGE 71
F+ ++ I + + RI +N V+ ++ + + +++ LQ+
Sbjct: 11 FLALVVFIEAQTPLLAAQVLDRIVAVVNDSVVLQSELKEELIIVRQQLQRQDMQLPDPRN 70
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+ +++LI++ L+ ++GI+ D T++ + A ++ F L + IG
Sbjct: 71 LQHQVLEQLILKKLQLDAASRTGISVDDATLDAAVRRVAEQNQMTLSQFRDALAAEAIGW 130
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
F+ L Q I + + EI + + EY + +L ++PD
Sbjct: 131 EDFRDKLRDQIIISRLRHQVMQSRINVTPQEIAQFVAQQRGGQSAEYHLGHILVALPDAA 190
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ + +L ++ + G + + +L L+
Sbjct: 191 SPQTIAQARDKAERIHRQLEQEASFETLAASYSDSQTALQGGDLGWRKQGELPTLIAELI 250
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEYVK 306
T + G + +R+ I + ++ + ++ ++
Sbjct: 251 SGLPVGKVTPVLRSPSGFHIFKLLARREGERHIITQTHARHILIETNAVVSDRDARRRLE 310
Query: 307 KLRSN 311
LR
Sbjct: 311 SLRKR 315
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 54/155 (34%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+++ + + + R +L +R ++ R+ L K S
Sbjct: 274 LARREGERHIITQTHARHILIETNAVVSDRDA---RRRLESLRKRIENGDSFAALAKAHS 330
Query: 225 --KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
G ++ + F+ ++ + + P+ T+ G + + ++R
Sbjct: 331 DDSTSAFQGGDLGWVDPGRMVATFEQVMDSLQPDEISQPFHTRYGWHIVQVLNRRKQDTT 390
Query: 282 IALKAYLSAQNT-PTKIEKHEAEYVKKLRSNAIIH 315
A + +AQ K++ ++++LR A +
Sbjct: 391 EAYRREQAAQQIQNRKLQDETQLWLRQLREEAYVD 425
>gi|122070641|sp|Q145L3|SURA_BURXL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 450
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
F+ + +S I +N VIT ++ +R+ L+ +
Sbjct: 18 SFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMD 77
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ GIT D TV + A L+ + + S ++ QG+
Sbjct: 78 QLRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVP 137
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
F + + + + K + E+ A+++ + ++ +
Sbjct: 138 WTTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKA 197
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P N + +R A + + + KL K S+ D S G ++ S L P+F
Sbjct: 198 PLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEF 257
Query: 247 -QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
+ T G E + + D+R G
Sbjct: 258 VKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQG 293
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 67/180 (37%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L + PD+++ + L + + +R +L + ++
Sbjct: 264 LRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRV--GDGMSEPQ 321
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + + ++ G ++ + P+F+ + Q
Sbjct: 322 ARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQ 381
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + +R+ G +A + L+ Q K E+ A+++++LR A +
Sbjct: 382 ISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 441
>gi|254491890|ref|ZP_05105069.1| SurA N-terminal domain family [Methylophaga thiooxidans DMS010]
gi|224463368|gb|EEF79638.1| SurA N-terminal domain family [Methylophaga thiooxydans DMS010]
Length = 421
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 114/303 (37%), Gaps = 15/303 (4%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKI 75
+ + + + RI +N EVI + ++ + ++ Q + L K
Sbjct: 5 LMAALLLTTNVLAQPLDRITAVVNDEVILESELMEMQQTVRQQLRQRDAAIPPSEVLNKQ 64
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++ LI++ L+ Q E+ G+ + +N Q A N ++ F L+ G ++F+
Sbjct: 65 VLERLIMQRLQLQRAEQVGVRVGDDALNAALKQIANNNNMNLRQFRDVLEDDGYNFSNFR 124
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + I + K+ + E E+ Q ++ EY ++ +L S+P+
Sbjct: 125 NTIREEMIITRLRKSQVEDRVVVSEREVDNFLTTQTIQEGGEVEYQLQHILVSMPEAASP 184
Query: 194 NQGF-VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
Q +++++ + + ++ + + G+ + +L F ++
Sbjct: 185 EQVQEAEQQLQKVQALLDEGGEFSEVAAGYSDGQNALEGGELGWRKHGELPSLFAEVVPD 244
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + G + + DK+ + L +++ + + E +++L
Sbjct: 245 LEVGEVSQALRSGSGFHLVRVKDKKSQELHLVKQTLASHILIRANELTSAEQAEERLQQL 304
Query: 309 RSN 311
R
Sbjct: 305 RQR 307
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--G 232
V++ L +L N+L + ++R++ + R+ ++ +L + S +I G
Sbjct: 276 VKQTLASHILIRA--NELTSAEQAEERLQQLRQ-RIAKGENFAELARAHSDDTGSAIDGG 332
Query: 233 KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSA 290
+ + P+F+ + ++ + ++ G I + D+R+ + +
Sbjct: 333 SLGWTSPGVMVPEFEEKMNALAIGEMSDVFESRFGWHLIKVYDRREQNMADEFKRNKARE 392
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316
Q KI++ +++ +R A + Y
Sbjct: 393 QIRQRKIDEELESWLRAMRDEAYVEY 418
>gi|238758995|ref|ZP_04620166.1| Chaperone surA [Yersinia aldovae ATCC 35236]
gi|238702806|gb|EEP95352.1| Chaperone surA [Yersinia aldovae ATCC 35236]
Length = 434
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 104/283 (36%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQSGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT ++ A ++A S L
Sbjct: 59 QVPDDATLRHQILERLIMDNIQLQMAKKMGITISDEALDKAIADIAAQNRMTAAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQVGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + + ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEDLAKRLVTEIKGGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + + P + G + + D R G +
Sbjct: 239 LPSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 67/242 (27%), Gaps = 31/242 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----- 147
V+ A+ DF K Q W +
Sbjct: 186 NPSQQQVDQA-EDLAKRLVTEIKGGADFGKLAIANSADSQALKG---GQMGWGKLQELPS 241
Query: 148 -------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
V G +++ + K ++V E R +L + +
Sbjct: 242 LFAERLQSANKGDVVGPIRSGVGFHILKVNDIRGADKTVSVTEVHARHILLK--PSPVMT 299
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLK 251
+ ++ A + K S+ + G + P F++ ++K
Sbjct: 300 DDQARAKLTAAAADIKSGKSSFATIAKEISQDPGSAMQGGDLGWASPDIYDPAFRDAVMK 359
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
S+ + P + G I + D R + + A K K + ++++ R+
Sbjct: 360 LSKGEISAPVHSSFGWHLIQLVDTRQVDKTDAAQKDKAYRMLFSRKFAEEAQTWMQEQRA 419
Query: 311 NA 312
A
Sbjct: 420 AA 421
>gi|92113046|ref|YP_572974.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter
salexigens DSM 3043]
gi|122070642|sp|Q1QZ33|SURA_CHRSD RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|91796136|gb|ABE58275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter
salexigens DSM 3043]
Length = 435
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 103/270 (38%), Gaps = 10/270 (3%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELE 73
+++ + P ++ RI +N + I + R+ ++ Q + +L
Sbjct: 12 MLLVAMAPSMASAQPQPLDRIVAVVNKDAIMQSRLEDRVTQVRRQMASRNVPAPNEADLR 71
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + +I+E ++ Q E++ ++ D +N A + G+S ++F+ L++ G+
Sbjct: 72 RQVLDRMILEQIQLQMAERANLSIDDTQLNATVRGIAEDNGMSMDEFADALEEDGMSLAS 131
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
++ + + + V ++ + + E+ + Y + +L S+P++
Sbjct: 132 MREQVRREMLLRQVQQSQVASRVNVTDREVERYLDQQGETADTAYHLAHILVSVPESPTP 191
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
Q + +L+ + + + +S G + L F +++
Sbjct: 192 EQVEQAQAKVRDLYRQLQNGANFAQLATAESDGQQALSGGDLGWRRGDQLPSLFADVVPT 251
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
S + P + G + + D R GE
Sbjct: 252 LSNGEVSEPIRSPSGFHLVKLIDTRGQQGE 281
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+Q + V E +R +L I N +N + +D + R+ + L + S
Sbjct: 276 RGQQGEQKRVVTENRVRHIL--IGTNPNRNDQQAEALARDIRQ-RIANGESFAALAQEYS 332
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G+ + + P F++ +K + P ++ G I + D+R
Sbjct: 333 DDDGSALDGGELGWTRPGQMVPAFEDAVKALDVGELSQPVRSRFGYHVIELEDRRRQDVT 392
Query: 282 IALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K+ + +++RS A I
Sbjct: 393 RDAQREQIRQTLFQRKVSDEMEAWTQEIRSGAYID 427
>gi|148553334|ref|YP_001260916.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
gi|148498524|gb|ABQ66778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
Length = 446
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 14/259 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ L ++ LI ETL+ QE +
Sbjct: 58 AIVNGTIITQTDVEQRLALVIAANGGNIPDEERERLRLQVLRNLIDETLQIQEATAQKVE 117
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V + + A N S ++F+ FL ++G K+ + ++ W V+
Sbjct: 118 VSREEVQQTYDRVAANFRKSPKEFAEFLHEKGSSQASIKRQIEGEAAWRRVLSRKVEPFV 177
Query: 157 GNLEMEIPANKQKMKNI-TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+ A ++K EY + + S + +RI D ++R
Sbjct: 178 AVSDEEVNAIIARLKASKGANEYHVGEIFLSATPETMNEANANAERIID----QVRRGAS 233
Query: 216 CNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273
+ S+ ++ G ++ L Q ++ + + P G + +
Sbjct: 234 FAAYARQFSEASTAAVGGDLGWVRAEQLPDQLSAVVNQLQPGQISQPIAIPGGYSILLLS 293
Query: 274 DKRDLGGEIALKAYLSAQN 292
DKR + G A L +
Sbjct: 294 DKRQVLGADPRDAQLLLKQ 312
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 59/156 (37%), Gaps = 7/156 (4%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ + + L++ + + P Q Q + +A L K C + A
Sbjct: 294 DKRQVLGADPRDAQLLLKQLTVNFPPGITQAQATPK---VEAFAKALEQIKGCGNANEVA 350
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY-VTQKGVEYIAICDKRD-LGG 280
+ I + + DL PQ Q ++ Q +T P+ + G+ + +C + D
Sbjct: 351 ANI-GAEVVNNDQMKIRDLPPQLQEVMLNLQIGQSTPPFGSMRDGIRALILCGRDDPAPS 409
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ +Q ++ + Y++ LR +A+I Y
Sbjct: 410 SGPSFEQIQSQIEQERVNRRAQRYLRDLRRDAVIEY 445
>gi|94497694|ref|ZP_01304262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas sp.
SKA58]
gi|94422911|gb|EAT07944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas sp.
SKA58]
Length = 462
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 14/259 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSGIT 96
+NG +IT D+ +R+AL+ L ++ LI ETL+ QE + I
Sbjct: 74 AIVNGRIITGTDVDQRLALIITANGGKVSDEEKERLRVQVLRNLIDETLQIQEAAANDIK 133
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ + + A N S +F ++L QG K+ + + W +++ +
Sbjct: 134 IAPEEIEQSYQRVAANFRKSPTEFDAYLRSQGSSAASIKRQIEGELAWSRLLRRNIQPFV 193
Query: 157 GNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ + ++ EY I + + P+N+ Q + I+ ++
Sbjct: 194 NVSEDEVKSVIDRLNAAKGSDEYRIGEIYLSATPENQAQIVANARNIIQQIQQG----GS 249
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
+F+ G ++ + L + + Q P T GV I +
Sbjct: 250 FQAYARQFSEASTAAVGGDLGWIRPAQLPSELAQAAAEMQVGQIAGPIETVGGVSIIYVM 309
Query: 274 DKRDLGGEIALKAYLSAQN 292
DKR + A LS +
Sbjct: 310 DKRKVLTADPRDALLSLKQ 328
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY-VTQKGVEYIA 271
K C + + ++I + + DL PQ Q +L Q TT P+ + GV +
Sbjct: 357 KGCGQANEIGARI-GADVVDNDNVKVRDLPPQLQEILLNLQVGETTPPFGSIEDGVRVLI 415
Query: 272 ICDKRD-LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+C + D + AQ ++ K Y++ LR +A+I Y
Sbjct: 416 VCGRDDPASANAPNADQIMAQLEEERVNKRARIYLRDLRRDAVIDY 461
>gi|91781822|ref|YP_557028.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
xenovorans LB400]
gi|91685776|gb|ABE28976.1| Putative peptidyl-prolyl cis-trans isomerase [Burkholderia
xenovorans LB400]
Length = 453
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
F+ + +S I +N VIT ++ +R+ L+ +
Sbjct: 21 SFLSVAPVQAQALSGSGGQTVDTIAAVVNNGVITRRELDERMGLITRRLNQQNAPVPPMD 80
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ GIT D TV + A L+ + + S ++ QG+
Sbjct: 81 QLRQQVLNQMVLERIQLQKAKEDGITIDDATVQKTLERLAAANNLTLDVYRSRIEAQGVP 140
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
F + + + + K + E+ A+++ + ++ +
Sbjct: 141 WTTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGLTSDLHLQHIFLKA 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P N + +R A + + + KL K S+ D S G ++ S L P+F
Sbjct: 201 PLNASETDIEAAQRKAQALLAEAKGGANFEKLAKSNSQAPDASKGGDTGFVSPSKLPPEF 260
Query: 247 -QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
+ T G E + + D+R G
Sbjct: 261 VKAASALRPGEVNPDLIRTSDGFEIVRLVDRRAGQG 296
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 67/180 (37%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L + PD+++ + L + + +R +L + ++
Sbjct: 267 LRPGEVNPDLIRTSDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRV--GDGMSEPQ 324
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + + ++ G ++ + P+F+ + Q
Sbjct: 325 ARQKLLEIKNEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQ 384
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + +R+ G +A + L+ Q K E+ A+++++LR A +
Sbjct: 385 ISDPVRSEYGYHLIQVLGRRESEGSVAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 444
>gi|300114054|ref|YP_003760629.1| peptidylprolyl isomerase [Nitrosococcus watsonii C-113]
gi|299539991|gb|ADJ28308.1| Peptidylprolyl isomerase [Nitrosococcus watsonii C-113]
Length = 426
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 112/277 (40%), Gaps = 13/277 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE--- 71
+ V I+ + S+ + ++ RI +N +++ + ++ + + ++ Q G
Sbjct: 1 MGKVLVAIVVLFWTMGSFATMSL-DRIVAVVNEDIVLESELEQMVRTVQDQLAAQGTSLP 59
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
LE+ ++ L++E L+ Q ++GI T+N + A+N GL+ F + L++
Sbjct: 60 PGYVLERQVLERLVMEQLQLQLAARTGIQVGDETLNEALGRIAQNNGLTLSQFRNVLEQD 119
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLF 185
G +F++ + + I + K + + + EI K + +Y + +L
Sbjct: 120 GYDFPNFRENIRKELIISQLHKREVNDRVSVSKAEIDNFLATQKKHGNQDAQYHLAHILI 179
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHP 244
++P+ Q K + +LR D K ++ + G + L
Sbjct: 180 TVPEAASPEQVQGAKAKAEQVLQQLREGTDFQKVAVTYSDGQQALEGGDLGWRKVGQLPT 239
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
F +++ + Q + + G + + + R GG
Sbjct: 240 LFVDVVPQLQVGEISKLIRSPSGFHIVKLLEYRGEGG 276
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-- 224
+ + V + R +L ++L ++ VQ R+ + R+ D ++L + S
Sbjct: 272 RGEGGQQLVTQTQARHILLRA--DELASEQEVQLRLSQLRQ-RILSGDDFSELAQAHSDD 328
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
K + G ++ + P+F+ ++ + P+ TQ G + + D+R
Sbjct: 329 KASALKGGDLGWVSPGQMIPRFEEAMRSLEPGEISEPFKTQFGWHVVQVLDRRQENVTEE 388
Query: 284 LKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K+E+ ++++LR A + Y
Sbjct: 389 FNRNRAKTEIHQRKVEEELENWLRQLRDEAYVEY 422
>gi|229512625|ref|ZP_04402094.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TMA 21]
gi|229350302|gb|EEO15253.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TMA 21]
Length = 431
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLTQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + LR D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSAAET---LANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|300705125|ref|YP_003746728.1| peptidyl-prolyl cis-trans isomerase (ppiase), involved in
maturation of outer membrane proteins [Ralstonia
solanacearum CFBP2957]
gi|299072789|emb|CBJ44144.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Ralstonia
solanacearum CFBP2957]
Length = 474
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 109/313 (34%), Gaps = 24/313 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q
Sbjct: 46 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQAQNRPMPARA 105
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 106 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLVQSGLA 165
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
+ +++ L + + + + K + EI A + +EY + +L +
Sbjct: 166 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGGATGEAQEYNVAQILVPV 225
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQF 246
++ Q + + + + D KL + +S G+ L QF
Sbjct: 226 AEDASAEQKAAARGKAENLLKQAQGGADFAKLVRDNSSGPEAAQGGELGLRSIGRLPTQF 285
Query: 247 QN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIE 298
N ++ + G + + DKR G + K ++ + PT
Sbjct: 286 ANAVVDLKPGQLAGQVIESPAGFHVLKLVDKRAPGTAASAKVAQTQVRHILIKTGPTMSA 345
Query: 299 KHEAEYVKKLRSN 311
+ LR
Sbjct: 346 DDARRQLAGLRDR 358
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ V + +R +L + ++++ + + + +++
Sbjct: 320 GTAASAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFSDAARRYSQDTS 377
Query: 228 DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G+ ++ L P+F+ + + P +Q GV I + +RD + +
Sbjct: 378 ASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQPVQSQFGVHLIQVEGRRDAEVPVDRQR 437
Query: 287 -YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Y + K++ +++++LR +A + Y
Sbjct: 438 DYARSVIREQKVQAAYEDWLRQLRDSAHVEY 468
>gi|190571205|ref|YP_001975563.1| hypothetical protein WPa_0803 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357477|emb|CAQ54911.1| hypothetical protein WP0803 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 375
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIAL----LKLQKING-ELEKIAVQELIVETLKKQEIE 91
A I +NGE I++ DI +RI L QKIN E++ +++LI E + E +
Sbjct: 18 ATEIEIVADVNGEPISNLDIERRINFINSLLGTQKINQKEVKSQILRQLIDEIIIVSEAQ 77
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
K I + +N + L A++ ++ K I N K+ + Q +W +++
Sbjct: 78 KMNIELSNEELNNAVTLFLTQSLKLKADEVDQYVKKHNIDLNTLKKQIKCQLLWNKIIEV 137
Query: 151 DFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + E+ A KQK K+ +YLI F IPD K+ + R + ES
Sbjct: 138 GVVPLINISDQEVDDARKQKEKS----DYLITFQEFIIPDQKIAEDLVKKLRTSNNPESS 193
Query: 210 LRLPKDCNKLEKFASKIHDVSIG 232
+++ K L + K+ DV G
Sbjct: 194 IKMSKATVNLSQLKGKLKDVLEG 216
>gi|149377958|ref|ZP_01895684.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola
DG893]
gi|149357732|gb|EDM46228.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola
DG893]
Length = 429
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 115/309 (37%), Gaps = 21/309 (6%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-LQKINGE------- 71
+ ++ +V + ++ +N +VI ++ RI + + G
Sbjct: 1 MLALMVVMVSATVQADRKLLDQVVAVVNDDVILQSELEARINTITGRLRAQGTGLPPRDI 60
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
LE+ +++LI E+++ Q +++G+ N +N A+ ++ F L ++G+
Sbjct: 61 LEERVLEQLISESIQLQMADRAGMRISDNELNETLASIAQRNNMTLAQFEQQLVQEGVTY 120
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPD 189
++ + + I V + + + E+ + + EY + +L +
Sbjct: 121 REAREQIRNEMITSRVQQRQVGNRVRVTDREVENYLAAMAGQGRSNAEYELAHILIEV-- 178
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQF 246
N ++ V + E+ R + + + + + + G + E+ L
Sbjct: 179 NDFNDEEEVSAAREKVEQLREEIAEGRDFRSVAVAESDASNALDGGNMGWRAENQLPSLV 238
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+++ + G + + D+R GG+ KA Q+ I +E V
Sbjct: 239 ADVVPDLETGTVSPVLRNSSGFHLVMVMDRR--GGD---KAQFIEQSKVRHILVRTSETV 293
Query: 306 KKLRSNAII 314
+ ++ A I
Sbjct: 294 SEAQAEATI 302
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/303 (11%), Positives = 91/303 (30%), Gaps = 62/303 (20%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE--------DFSS 122
E + E+I ++++++ + V + A +AE + +
Sbjct: 122 EAREQIRNEMITSRVQQRQVGNR-VRVTDREVENYLAAMAGQGRSNAEYELAHILIEVND 180
Query: 123 FLDKQGIG-----DNHFKQYLAIQ---------------------SIWPDV--------- 147
F D++ + ++ +A W
Sbjct: 181 FNDEEEVSAAREKVEQLREEIAEGRDFRSVAVAESDASNALDGGNMGWRAENQLPSLVAD 240
Query: 148 ---------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
V G + + + K + + +R +L + + Q
Sbjct: 241 VVPDLETGTVSPVLRNSSGFHLVMVMDRRGGDKAQFIEQSKVRHILVRTSETVSEAQAEA 300
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255
R ++ D + + S + G ++ + P+F Q +++
Sbjct: 301 TIR---DLYQQIDNGADFAVIAREHSDDPVSGSDGGNLGWVSPGQMVPEFEQAMMEADVG 357
Query: 256 NTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P+ +Q G + + D+R D+ G+ ++ K + +++++R A
Sbjct: 358 ELKGPFRSQFGWHILQVQDRRQQDISGD-VRESEARQAIYRRKFDTELQNWLREIRDEAF 416
Query: 314 IHY 316
I +
Sbjct: 417 IEF 419
>gi|262403929|ref|ZP_06080486.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC586]
gi|262349891|gb|EEY99027.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. RC586]
Length = 431
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQIRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSAAET---LANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|153827415|ref|ZP_01980082.1| survival protein SurA [Vibrio cholerae MZO-2]
gi|149738658|gb|EDM53001.1| survival protein SurA [Vibrio cholerae MZO-2]
Length = 431
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + +N + + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKNAAET---LANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|153820172|ref|ZP_01972839.1| survival protein SurA [Vibrio cholerae NCTC 8457]
gi|126509282|gb|EAZ71876.1| survival protein SurA [Vibrio cholerae NCTC 8457]
Length = 393
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + LR D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSTAET---LANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 9/160 (5%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286
++ + P+ T G + + D+R++ + ALK
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKT 393
>gi|254229741|ref|ZP_04923149.1| ppic-type ppiase domain protein [Vibrio sp. Ex25]
gi|262392437|ref|YP_003284291.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. Ex25]
gi|151937708|gb|EDN56558.1| ppic-type ppiase domain protein [Vibrio sp. Ex25]
gi|262336031|gb|ACY49826.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio sp. Ex25]
Length = 427
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 102/265 (38%), Gaps = 19/265 (7%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAV 77
++ + + ++ +N VI DI + L+ L++ V
Sbjct: 11 TLLSCGAVAAPVEIDKVAVIVNDGVILQSDIETAMKTLQANARQSGKSLPSASVLKEQVV 70
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++LI++TL+ QE ++ G+ D N +N + ARN S E ++ ++ +G+ F++
Sbjct: 71 EKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNEQSVEQLAASVESEGLSYPEFREQ 130
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + L E+ A + + +Y I + + +
Sbjct: 131 IRKEIAASEARNALVRRRINILPAEVDSLAEQLSQETNATVQYKIGHIQL-----RFSDD 185
Query: 196 GFVQKRIKDAEESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK- 251
+A+ +L + + ++ + G ++ + ++ F + +K
Sbjct: 186 KEKSAVEAEAKALAKKLNEGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKM 245
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKR 276
+++ + P+ + G + I D +
Sbjct: 246 QNKGSIIGPFRSGVGFHILKIEDVK 270
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 70/189 (37%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHIL--IKPT 290
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + +K++ + +L S+ + G+ Y P+F++
Sbjct: 291 VILSDEGAKKQLNEFVRRIKAGEATFAQLATQYSQDPGSAAQDGELGYQTPDLYVPEFKH 350
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + + P+ T G + + D+R + + A+K K + +++
Sbjct: 351 QVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGAWMQ 410
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 411 ELRASAFVE 419
>gi|254522723|ref|ZP_05134778.1| chaperone SurA [Stenotrophomonas sp. SKA14]
gi|219720314|gb|EED38839.1| chaperone SurA [Stenotrophomonas sp. SKA14]
Length = 447
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 19/319 (5%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
F LL + + V + RI ++ +VI ++ + IA +K Q
Sbjct: 4 RFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVILQSELQRAIANIKAQYAGR 63
Query: 71 E--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
E L + ++ L++ L+ + SGI +N A+ G + +
Sbjct: 64 ENQLPPEDVLSRQVLERLVLVKLQVARAQSSGIRVGDQELNQAMNAIAQQNGSTLDALRQ 123
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
L GI N F+ + + + ++ + E E+ A K + +Y +
Sbjct: 124 RLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVSEGEVDAAL-KQQATVGNQYHLAH 182
Query: 183 VLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLES 240
+L ++PD +Q ++ D + + D N +++ + + G +
Sbjct: 183 ILVALPDGANADQIATGQKKADGVKALLDKGELDFNAAAVRYSDSPNALEGGDLGWRSLD 242
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQN 292
++ F +++K P G + + + D RD ++ +
Sbjct: 243 EIPQAFAQMMEKMKPGEVVGPIRGPSGFQLLKLVDVRDASATAGANTVTEYHGRHILVRV 302
Query: 293 TPTKIEKHEAEYVKKLRSN 311
+ + + LR+
Sbjct: 303 DDHQTDAAAKAKIDTLRAR 321
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 7/160 (4%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+++ TV EY R +L + D++ K D +R+ D +
Sbjct: 276 VDVRDASATAGANTVTEYHGRHILVRVDDHQT---DAAAKAKIDTLRARIAGGADFETVA 332
Query: 221 KFASKIHD--VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
K +S+ ++ G + P F Q + + P+ T G + R
Sbjct: 333 KESSEDNNSKGQGGDLGWFPADAFGPAFGQQVSGLQDGGVSQPFRTDAGWHIVQRVATRQ 392
Query: 278 LGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+A + K+E ++++LR A + +
Sbjct: 393 TDVTNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYVSF 432
>gi|254292211|ref|ZP_04962978.1| survival protein SurA [Vibrio cholerae AM-19226]
gi|150421868|gb|EDN13848.1| survival protein SurA [Vibrio cholerae AM-19226]
Length = 431
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + LR D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSAAET---LANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|170699177|ref|ZP_02890230.1| SurA domain [Burkholderia ambifaria IOP40-10]
gi|170135902|gb|EDT04177.1| SurA domain [Burkholderia ambifaria IOP40-10]
Length = 452
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 116/300 (38%), Gaps = 22/300 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 RGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q + V ++
Sbjct: 154 KLREREVDGKITVSDAEVVNYIASQRGPSASQQQDLRFQHIFIKAPTNAPQAEIEVAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+A + D KL K S+ +D G + L P+ + K
Sbjct: 214 AEALLQQATFGADFEKLAKNNSEANDAKKGGDLGFKAPGALPPEVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E + + D+R G A ++ + K E + ++ +R
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G +++++D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 321 GQARQQLQDIR-RQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQ 379
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + D+R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 380 DGQISQPVRTEYGYHLIQVIDRRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 439
Query: 313 IIHY 316
+ Y
Sbjct: 440 YVQY 443
>gi|153803547|ref|ZP_01958133.1| survival protein SurA [Vibrio cholerae MZO-3]
gi|297580585|ref|ZP_06942511.1| survival protein SurA [Vibrio cholerae RC385]
gi|124120914|gb|EAY39657.1| survival protein SurA [Vibrio cholerae MZO-3]
gi|297535001|gb|EFH73836.1| survival protein SurA [Vibrio cholerae RC385]
Length = 431
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + LR D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSAAET---LANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 73/186 (39%), Gaps = 9/186 (4%)
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F + +Q + F G ++I K ++ + V E R +L I +
Sbjct: 242 FADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPTIIL 296
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLK 251
+ QK++ + + +L + S+ + G+ Y P+F++ ++
Sbjct: 297 SDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIE 356
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ P+ T G + + D+R++ + ALK K + + ++++LR
Sbjct: 357 TLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELR 416
Query: 310 SNAIIH 315
++A +
Sbjct: 417 ASAFVE 422
>gi|330818272|ref|YP_004361977.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia gladioli
BSR3]
gi|327370665|gb|AEA62021.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia gladioli
BSR3]
Length = 451
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 113/292 (38%), Gaps = 25/292 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM----------SSRIRTTINGEVITDGDISKRIALL 63
L V + ++ ++S A + + +N VIT ++ +R+ L+
Sbjct: 4 SLRFAAIVSGLAAVMSLLSVTPAAAQALGSSGATLADEVVAVVNNGVITARELDQRVGLI 63
Query: 64 --KLQKI------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ EL + +++VE ++ Q+ + GI TV + A G+
Sbjct: 64 SRRLQQQKVPVPPPDELRSQVLNQMVVERIQLQKAKDDGIEVSDATVQSTLQRLAAANGM 123
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + + L+ G+ + F + I + + + K + E+ A+++ +
Sbjct: 124 TVDQYRAQLEALGVPWSTFSGDARNELILSRLREKEVDSKITVTDAEVASYIASQRGPNS 183
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + + P N Q+Q + ++ D + L D KL + +S+ D +
Sbjct: 184 GSQQDVRLEHIFVAAPQNAPQDQIDIAQKKADGLLKQALASGADFEKLARNSSEAKDAKT 243
Query: 231 IGKAQYLLESDLHPQ-FQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
G + L Q + + + G E + + D+R G
Sbjct: 244 GGDLGFKAPGSLPADVVQAVSQLRPGQVSPNLIRVPDGFEIVRLVDRRPASG 295
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 73/182 (40%), Gaps = 4/182 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P++++ + L PA+ + + + +R +L + + K ++
Sbjct: 264 SQLRPGQVSPNLIRVPDGFEIVRLVDRRPASGTVGASPKIVQTHVRHILLRVGEGK--SE 321
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
++++ D N ++ G ++ + P+F+ + + Q
Sbjct: 322 SQARQQLIDIRNQIEAGGDFANFARTYSQDGSASQGGDLGWISPGETVPEFERAMSQLQD 381
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + +RD G + + ++ Q K E+ A+++++LR ++
Sbjct: 382 GQISQPVRTEYGYHLIQVLGRRDAEGSVQKQMDIARQAIGQRKAEQAYADWLRELRDSSY 441
Query: 314 IH 315
+
Sbjct: 442 VQ 443
>gi|149186120|ref|ZP_01864434.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Erythrobacter sp.
SD-21]
gi|148830151|gb|EDL48588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Erythrobacter sp.
SD-21]
Length = 448
Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 92/270 (34%), Gaps = 15/270 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGIT 96
+NG VIT D+ +R+ALL + ++ LI ETL+ Q E I
Sbjct: 59 AVVNGYVITGTDLDQRLALLVNANQTEIPAEELQRVRAQVLRNLIDETLQIQAAEAEEIV 118
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V F + A ED ++L G K+ + + W +++
Sbjct: 119 ISDAEVEQTFARVAAQNNQRPEDMENYLASIGSSSASLKRQIRGELAWQRLLRQKVSFFV 178
Query: 157 GNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E+ ++++ EY + + + P+N Q QK ++ +
Sbjct: 179 NVSAEEVNELMERLEAAKGTDEYWLWEIFMSATPENDAAVQANAQKIMEQLRQG----GS 234
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+F+ G ++ + L PQ + ++ + P G + +
Sbjct: 235 FVAYARQFSEASTAAVGGDLDWIHLAQLGDPQLETVVAQMEAGQLVGPIKIPGGYWIVYL 294
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
DKR + A LS + + A
Sbjct: 295 RDKRQVLMADPRDAMLSLKQIQIDFDPAAA 324
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 7/182 (3%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ Q +V + + + M + ++ +
Sbjct: 270 VVAQMEAGQLVGPIKIPGGYWIVYLRDKRQVLMADPRDAMLSLKQIQIDFDPAAAPE--- 326
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
V K+ DA + + C ++ AS + S+ + L Q QN++ Q
Sbjct: 327 VNKQKLDAFTQGVSTMRGCGSADEIASSL-GASVVTNDQIRARALPEQLQNIMLSLQIGE 385
Query: 257 TTNPYVT-QKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
TT P+ + ++GV + +C + D E L AQ +I K Y++ LR++A I
Sbjct: 386 TTPPFGSLEEGVRVLMLCGRDDPESSEGPNFDELMAQIEDERINKAAQRYLRDLRNDAYI 445
Query: 315 HY 316
Y
Sbjct: 446 EY 447
>gi|323493622|ref|ZP_08098743.1| survival protein SurA [Vibrio brasiliensis LMG 20546]
gi|323312145|gb|EGA65288.1| survival protein SurA [Vibrio brasiliensis LMG 20546]
Length = 432
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 101/275 (36%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
++ + + ++ I +N V+ DI + LK
Sbjct: 1 MRFWKHALLALCATSTLNTAHAEPVALDNIAVIVNSGVVLQSDIDTSLKTLKANAKKSGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + ++LIV+T+++QE ++ G+ D N +N + ARN + E S+ +
Sbjct: 61 SLPSEQVLREQVTEKLIVDTIQQQEAQRIGVRIDDNRLNEAIEEIARNNQQTVEQLSASI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
++G+ F++ + + + + L E+ + T +Y I
Sbjct: 121 AQEGLSYAEFREQVRKEIAASEARNALVRRRINILPAEVDNLANILAKETNATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ + N ++ ++K+ + E ++ + G ++ + ++
Sbjct: 181 IQLRV--NDGDDKSAIEKQAQQLVEKLKEGADFSTMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + + +++ + P+ + G + I D +
Sbjct: 239 PTIFADQINLQNKGSIIGPFRSGVGFHILKIEDVK 273
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ + V E R +L I + + VQK +K+ + ++ + S+
Sbjct: 274 GLETVAVTEVNARHIL--IKPTVILSDEGVQKDLKEITQRIKSGKATFAEMAQQYSQDPG 331
Query: 229 VSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ Y P+F++ + + P+ T G + + D+R++ + AL
Sbjct: 332 SAAQDGELGYQTSEIYVPEFKHQVDTLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSAL 391
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + + +++++R++A +
Sbjct: 392 KNKAYRILFNRKFNEEASAWLQEIRASAYVE 422
>gi|238795196|ref|ZP_04638783.1| Chaperone surA [Yersinia intermedia ATCC 29909]
gi|238725483|gb|EEQ17050.1| Chaperone surA [Yersinia intermedia ATCC 29909]
Length = 434
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 104/283 (36%), Gaps = 16/283 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN 69
+K T + ++ C ++ + ++ ++ V+ D+ + + L Q
Sbjct: 1 MKNWRTLILGLVVCANT--AFAAPQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQSGQ 58
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI++ ++ Q +K GIT + ++ A ++ S L
Sbjct: 59 QVPDDATLRHQILERLIMDNIQLQMAKKMGITINDEALDKAIADIAAQNRMTTAQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLIRT 182
G+ + +++ + + + +V N+ + L E+ KQ + E +
Sbjct: 119 AADGLNYDTYREQIRKEMLTSEVRNNEVRRRITILPQEVESLAKQIGNQTSGDAELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L +P+N Q Q + + S ++ D KL S G+ + +
Sbjct: 179 ILIPLPENPSQQQVDQAEELATKLVSDIKSGADFGKLAIANSADSQALKGGQMGWGKLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + + P + G + + D R G +
Sbjct: 239 LPSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIR--GADKT 279
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 70/244 (28%), Gaps = 35/244 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGL-----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV--- 147
V+ + A L S DF K Q W +
Sbjct: 186 NPSQQQVDQA-EELAT--KLVSDIKSGADFGKLAIANSADSQALKG---GQMGWGKLQEL 239
Query: 148 ---------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
V G +++ + K I+V E R +L + +
Sbjct: 240 PSLFAERLQSANKGDVVGPIRSGVGFHILKVNDIRGADKTISVTEVHARHILLK--PSPV 297
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN-L 249
+ ++ A + K S+ ++ G + P F++ L
Sbjct: 298 MTDDQARTKLAAAAADIKSGKSSFATIAKEISQDPGSAVQGGDLGWASPDIYDPAFRDAL 357
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKL 308
+K + + P + G I + D R + A + + + K + ++++
Sbjct: 358 MKLQKGEISAPVHSSFGWHLIQVVDTRQVDKTDAAQKDRAYRMLFSRKFAEEAQTWMQEQ 417
Query: 309 RSNA 312
R+ A
Sbjct: 418 RAAA 421
>gi|15640472|ref|NP_230099.1| survival protein SurA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121729954|ref|ZP_01682374.1| survival protein SurA [Vibrio cholerae V52]
gi|147674503|ref|YP_001218713.1| survival protein SurA [Vibrio cholerae O395]
gi|153823925|ref|ZP_01976592.1| survival protein SurA [Vibrio cholerae B33]
gi|227080656|ref|YP_002809207.1| survival protein SurA [Vibrio cholerae M66-2]
gi|229507084|ref|ZP_04396590.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae BX
330286]
gi|229508761|ref|ZP_04398253.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae B33]
gi|229519748|ref|ZP_04409191.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC9]
gi|229606260|ref|YP_002876908.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae MJ-1236]
gi|254850676|ref|ZP_05240026.1| chaperone surA precursor [Vibrio cholerae MO10]
gi|255743828|ref|ZP_05417785.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholera CIRS 101]
gi|262147181|ref|ZP_06027987.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae INDRE
91/1]
gi|262167591|ref|ZP_06035295.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC27]
gi|298501023|ref|ZP_07010824.1| survival protein SurA [Vibrio cholerae MAK 757]
gi|81788531|sp|Q9KUS0|SURA_VIBCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|9654869|gb|AAF93618.1| survival protein SurA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121628294|gb|EAX60804.1| survival protein SurA [Vibrio cholerae V52]
gi|126518552|gb|EAZ75775.1| survival protein SurA [Vibrio cholerae B33]
gi|146316386|gb|ABQ20925.1| survival protein SurA [Vibrio cholerae O395]
gi|227008544|gb|ACP04756.1| survival protein SurA [Vibrio cholerae M66-2]
gi|227012299|gb|ACP08509.1| survival protein SurA [Vibrio cholerae O395]
gi|229344437|gb|EEO09412.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC9]
gi|229354164|gb|EEO19095.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae B33]
gi|229355829|gb|EEO20749.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae BX
330286]
gi|229368915|gb|ACQ59338.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae MJ-1236]
gi|254846381|gb|EET24795.1| chaperone surA precursor [Vibrio cholerae MO10]
gi|255738577|gb|EET93965.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholera CIRS 101]
gi|262023927|gb|EEY42624.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae RC27]
gi|262031386|gb|EEY49994.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae INDRE
91/1]
gi|297540271|gb|EFH76331.1| survival protein SurA [Vibrio cholerae MAK 757]
Length = 431
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + LR D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSTAET---LANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|160872391|ref|ZP_02062523.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Rickettsiella grylli]
gi|159121190|gb|EDP46528.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Rickettsiella grylli]
Length = 431
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 49/321 (15%), Positives = 114/321 (35%), Gaps = 20/321 (6%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---- 66
D++K + ++ VL + P + Y + RI +N IT + ++ + + Q
Sbjct: 2 DYLKKIFSFIVLWTSLVTPSLLY-AIETLDRIEAVVNHHAITAQQLDNQMEVKRQQWLSE 60
Query: 67 ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
K + E+I + L+ Q G+ + +T++ + A++ GL+ E
Sbjct: 61 NKSIPNTTTFRKQVLNEMIDQELQLQLAATIGLKINDDTLDKTILSIAQHNGLTLEQLRE 120
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLI 180
L + + +++ + Q + + +N+ K + EI + I + Y +
Sbjct: 121 KLQQANMPFARYREQIRHQLLINRLQQNEVAAKITVTDQEIKDMLTHLPKIISKKAVYHV 180
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLE 239
+L +N K + + + + L + A + +S G +
Sbjct: 181 EDLLIPFSNNPSSTDIARTKETALSLLQKAKQGTSFSALIEHANASTIPLSGGDLGWRPL 240
Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYI---AICDKRDLGGE--IALKAYLSAQNT 293
+DL FQ ++ P G I + + ++ + +
Sbjct: 241 NDLPDIFQTSVQTLKPGEVAGPIRADNGFHLIRLLELRGIAPAPHDVISTHARHILIKTS 300
Query: 294 PTKIEKHEAEYVKKLRSNAII 314
P + ++++R A I
Sbjct: 301 PLLNNQQAENRLREIR--ADI 319
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 8/136 (5%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQY 236
R +L + L N + R+++ L D L K S+ S G +
Sbjct: 291 HARHILIKT--SPLLNNQQAENRLREIRADILH-GGDFASLAKKYSQDPGSSYKGGDLGW 347
Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNT 293
L P F+ LKK N + P+ TQ G + + K+ + L +
Sbjct: 348 TLPGFFDPTFEEHLKKLAVNQISLPFQTQYGWHIVQVLGRAKKLQTAQNTLHKQAAQLVY 407
Query: 294 PTKIEKHEAEYVKKLR 309
K +K ++++LR
Sbjct: 408 QKKFQKALKNWLRQLR 423
>gi|330827221|ref|YP_004390524.1| chaperone surA [Alicycliphilus denitrificans K601]
gi|329312593|gb|AEB87008.1| Chaperone surA [Alicycliphilus denitrificans K601]
Length = 471
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 56/306 (18%), Positives = 110/306 (35%), Gaps = 19/306 (6%)
Query: 25 FCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRI-ALLKLQKINGE-------LEK 74
++P S A + I +N E IT+ ++ +R + + G L K
Sbjct: 50 ATLLPPAGATSPAVRQADYIVAVVNSEPITNNEVRQRAERVAQQLSGQGAAMPPHEVLVK 109
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
++ LI+E ++ Q ++ GI D VN AR +S ++ L GI F
Sbjct: 110 EVLERLILEKIQVQLAKEGGIKVDDYAVNQAEQNVARQNDVSVDEMHRRLAADGISKERF 169
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---EYLIRTVLFSIPDNK 191
++ L Q + V + D + ++E+ Q + E + +L +P+
Sbjct: 170 REELRNQLLALRVRERDVESRVRVSDLEVDQYLQDQQKTAGPGKMEINLGHILVKVPEGA 229
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLL 250
+ + +LR D L + S + + S G L D F +
Sbjct: 230 SPEEVARRAARAQEVLDKLRAGGDFGVLVQEYSDVPEGSGGGLLGLRPLDRYPELFVTAV 289
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYV 305
+++ + P + G + + D+ G ++ + E+ AE +
Sbjct: 290 QQAAVGSIVGPLRSPAGFHILKVVDRSQGGVPTMAVQSHARHILLRVGSGLSERQAAERL 349
Query: 306 KKLRSN 311
+ LR
Sbjct: 350 EDLRQR 355
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 5/157 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ Q + R +L + ++ +R++D + LR D L +
Sbjct: 312 VVDRSQGGVPTMAVQSHARHILLRV--GSGLSERQAAERLEDLRQRVLRGQADFATLARE 369
Query: 223 ASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLG- 279
S+ G + P+FQ L + P V++ GV I + ++R+
Sbjct: 370 YSQDGSAKDGGDLGWAGPGRYVPEFQEALNALRPGEISQPVVSRFGVHLIQLLERREAKL 429
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + K+++ ++++ R+ A + Y
Sbjct: 430 TQREQRDMVRDAVREKKLDEAFTTWIQEARARAYVEY 466
>gi|152968631|ref|YP_001333740.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238893026|ref|YP_002917760.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella pneumoniae
NTUH-K2044]
gi|330009278|ref|ZP_08306494.1| PPIC-type PPIASE domain protein [Klebsiella sp. MS 92-3]
gi|150953480|gb|ABR75510.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545342|dbj|BAH61693.1| peptidyl-prolyl cis-trans isomerase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238774029|dbj|BAH66526.1| peptidyl-prolyl cis-trans isomerase [Klebsiella pneumoniae
NTUH-K2044]
gi|238774061|dbj|BAH66557.1| peptidyl-prolyl cis-trans isomerase [Klebsiella pneumoniae]
gi|328534855|gb|EGF61397.1| PPIC-type PPIASE domain protein [Klebsiella sp. MS 92-3]
Length = 428
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ + ++ A+ ++ + S L +GI N
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + E+E A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
++ + ++ + R + KL S G+ + +L F
Sbjct: 187 PTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+++ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMLISEVRNNEVRRR-ITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQ---------GIGDNHFKQYLAI-QSIWPDV----------- 147
+S +++ I + +Q L Q W +
Sbjct: 188 TSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD--NKLQNQGFV 198
+ G +++ + +NI+V E R +L N Q Q +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKL 307
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++ + + ++ + + + G + P F++ L++ ++ T
Sbjct: 308 EQIAAEIKSGKITFAQAAKTYSEDPGSANQ--GGDLGWATPDIFDPAFRDALMRLNKGQT 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + A ++++ R++A
Sbjct: 366 SGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|302343060|ref|YP_003807589.1| SurA domain protein [Desulfarculus baarsii DSM 2075]
gi|301639673|gb|ADK84995.1| SurA domain protein [Desulfarculus baarsii DSM 2075]
Length = 327
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 52/325 (16%), Positives = 123/325 (37%), Gaps = 26/325 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIA----------- 61
L + + F + A +R+ + E IT ++ + I
Sbjct: 2 RLRSVIAGLAFVTMAFAPLAVLAEELVNRVVAVVGDEPITAAELDRSIQGLLQRLQMMQQ 61
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
E+ +A+ LI E L +E+E+ I+ V+ F + ++ +
Sbjct: 62 QQGQNMAMPPAAEVRYMALNSLIDEKLFNKEVERLKISVSEEEVSMFLERLKAANNMTQQ 121
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITV 175
+F + L++ G+ +++ + + ++ + K + E+ A ++
Sbjct: 122 EFIARLNETGMTPEEYREKVRNDQLKRKLINYEVKNKVVISDKEVDDYLAEHPELVQGGG 181
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKA 234
+ I+ + +P+N + + +A D +++ + S S GK
Sbjct: 182 PQLTIQALFLKLPENAGDDVKAQLRAKAEALREEAVDGADFDEMCRANSQGPGAASGGKI 241
Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGV---EYIAICDKRDLGGEIALKAYLSA 290
L +SDL P+ L+ + + + GV I++ D ++ E+ + + A
Sbjct: 242 GPLSKSDLLPEMGKALETMKEGDMSPVLDIPSGVVFMRLISLTDGKEGSAEV--RDQVRA 299
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
+ ++E+ E++K+LR+ I
Sbjct: 300 RLENNQLEERFGEWMKELRAKTYIQ 324
>gi|153217229|ref|ZP_01950993.1| survival protein SurA [Vibrio cholerae 1587]
gi|153830824|ref|ZP_01983491.1| survival protein SurA [Vibrio cholerae 623-39]
gi|229519985|ref|ZP_04409414.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TM
11079-80]
gi|229525138|ref|ZP_04414543.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae bv.
albensis VL426]
gi|124113752|gb|EAY32572.1| survival protein SurA [Vibrio cholerae 1587]
gi|148873683|gb|EDL71818.1| survival protein SurA [Vibrio cholerae 623-39]
gi|229338719|gb|EEO03736.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae bv.
albensis VL426]
gi|229342934|gb|EEO07923.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae TM
11079-80]
Length = 431
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
++G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSAAET---LANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|134296902|ref|YP_001120637.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
gi|134140059|gb|ABO55802.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
Length = 452
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 112/300 (37%), Gaps = 22/300 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 QGAQLTDEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPAEQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQSTLQRLAQANGMTLDQYRARLEAQGVPWSVFTSDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q ++
Sbjct: 154 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNP 260
+A + D KL + S+ +D G + S L P K
Sbjct: 214 AEALLQQATSGADFEKLARNNSEANDAKKGGDLGFKAPSTLPPDVVAAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E I + D+R G A ++ + K E + + +R
Sbjct: 274 LIRVPDGFEIIRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSENQARQQLLDIRKQ 333
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 71/183 (38%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K +NQ
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIIRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSENQ 322
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
++++ D + ++ G ++ + P+F+ + Q
Sbjct: 323 A--RQQLLDIRKQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQD 380
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + D+R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 381 GQISQPVRTEYGYHLIQVIDRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 440
Query: 314 IHY 316
+ Y
Sbjct: 441 VQY 443
>gi|117617860|ref|YP_855486.1| peptidylprolyl cis-trans isomerase SurA [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559267|gb|ABK36215.1| peptidylprolyl cis-trans isomerase SurA [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 432
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 101/275 (36%), Gaps = 12/275 (4%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70
K L + +F + ++ + + ++ +N +V+ + +K
Sbjct: 3 KTLISLLTAGLFGAMSQGAFAAPELMDKVLAVVNKDVVLASQQEALVQKVKASAQESGQS 62
Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L K A+ LI E+L+ Q ++ G+ + A + ++ + + L
Sbjct: 63 LPDDATLRKQALDRLIQESLQLQLADRQGLKISDTQLEQAIQSIAADNKMTLDQLRAQLA 122
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTV 183
++G+ +++ + + + +V +N + E E+ + ++Y + +
Sbjct: 123 REGLTYAQYREEVRREILMNEVRRNQVRRRINISEQEVKQVVDILAKQGQQQQQYHVGHI 182
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDL 242
++PDN Q K + + L+ D K+ +S + G ++ ++
Sbjct: 183 QVALPDNPSAEQLNAAKSKIERILAALKQGADFRKMAIAESSGPKALEGGDWGWMSPQEM 242
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
++ + + P + G+ I + D +
Sbjct: 243 PTLMAEAVQGTKKGDIVGPLRSGAGLHIIKVFDTK 277
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 54/151 (35%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFS--IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + E R +L I ++ + +G + + D + + K +
Sbjct: 278 GQQQVVQTEVRARHILIKPSIILSEEKAKGMLDGILHDIKSGKASFASLAEKYSEDPGSA 337
Query: 227 HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
V G+ + + P+F++++ + + P+ T G + + ++R +
Sbjct: 338 --VQGGELGWSDPNVYVPEFRDMVNRLQPGQISEPFRTTHGWHIVQLEERRSQDATNKAQ 395
Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315
+ Q + + ++ +LR A I
Sbjct: 396 EQRAYQLIYNRRFTEESQAWLDELRDEAYIQ 426
>gi|85374605|ref|YP_458667.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594]
gi|84787688|gb|ABC63870.1| peptidyl-prolyl isomerase [Erythrobacter litoralis HTCC2594]
Length = 473
Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 94/267 (35%), Gaps = 15/267 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGI 95
+NG VIT DI R AL+ + GEL + ++ LI ETL+ QE I
Sbjct: 84 AVVNGSVITGTDIDHRTALV-VASAQGELAEEEMVRVRMQVLRNLIDETLQVQEAAAQEI 142
Query: 96 TFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
++ VN + Q A G + ++L G K+ + + W +++ +
Sbjct: 143 NITADEVNQRYAQLAAQNFGNQPDAMDAYLLSIGSSPASLKRQIQGELAWQRLLRRNIAP 202
Query: 155 KYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
E E+ K+ ++ EY I + P Q +Q + E+ R
Sbjct: 203 FINVSEEEVNDLIKRLEESRGTEEYHIMEIYL--PATAETRQAVIQNGQQIMEQLRG-GA 259
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+F+ + G ++ L + + T P G I +
Sbjct: 260 SFLAYARQFSESSTAATGGDLGFVRLETLPAEMATAAQTMQPGQLTGPVEIPGGFVIIYL 319
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEK 299
DKR + A LS + E+
Sbjct: 320 RDKRAVLTADPRDALLSLKQISISFEE 346
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 9/141 (6%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238
++ + S + Q + + +A + + C E+ A + +V +
Sbjct: 337 LKQISISFEEGISQEEATSK---VEAFAGAVGSIRGCGDAERAAQTVGAEVVTNDQIRVR 393
Query: 239 ESDLHPQFQ-NLLKKSQNNTTNPYVT-QKGVEYIAICDKRD-LGGEIALKAYLSAQNTPT 295
DL Q Q ++L+ T P+ + Q+GV + +C + D + L ++
Sbjct: 394 --DLPEQLQGSMLELQVGQATQPFGSLQEGVRVLLLCGRDDPQAADGPSFDVLMSRMEEE 451
Query: 296 KIEKHEAEYVKKLRSNAIIHY 316
+I+K Y++ LR++A I Y
Sbjct: 452 RIQKRARRYLRDLRNDAYIEY 472
>gi|304413706|ref|ZP_07395150.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus Regiella
insecticola LSR1]
gi|304283797|gb|EFL92191.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Candidatus Regiella
insecticola LSR1]
Length = 434
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 99/273 (36%), Gaps = 12/273 (4%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
+++ I + + + + +N +VI DI + +K +
Sbjct: 5 GMLILSMVIFTHAGFAASQQTDKSAAIVNSKVILQSDIDTLLQSVKFSAEQADQPIPDEK 64
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ LI+ ++ Q +K G+T + ++ A ++ + S L K+GI
Sbjct: 65 QLRHQIIESLIMNDIQLQMAQKMGMTISESHLDNAIANIAAQNHMTIDQLRSRLAKEGIN 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIP 188
++ ++ + +V N+ + L E+ + Q + E I +L S+P
Sbjct: 125 YQTYRTHIRNEMQISEVRNNEVRRRIKILPQEVESLAQQLAAQTGGNTELNISHILISLP 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQ 247
+N Q ++ + + ++ K KL S G+ + ++L F
Sbjct: 185 ENASVQQKDQAEKKAEKIVAEIKSDKSFAKLAIAHSSDSQALKGGQMGWSKLAELPRLFA 244
Query: 248 NLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLG 279
LK + P + G + + D R
Sbjct: 245 EQLKTANKRDIIGPIRSGVGFHILKVNDIRKAD 277
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 52/152 (34%), Gaps = 9/152 (5%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
++ K I++ E +R +L + + Q +++ + D + + S+
Sbjct: 274 RKADKKISITEMRVRHILLK--PSVMMTDKQAQAKLQSVRQKIKSGKTDFAAVAREISED 331
Query: 227 HDVS--IGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--GG 280
+ G ++ D L + + P + G I + D R +
Sbjct: 332 PGSAQQGGDLGWISPDDRYDPTFLNELASLKKGAISPPVRSSLGWHLIQLIDSRTVDRTD 391
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
E+ + K + +++++R+ A
Sbjct: 392 EMLKEQAYRM-LIKRKFSEELQPWMQEIRAAA 422
>gi|21230267|ref|NP_636184.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769740|ref|YP_244502.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. 8004]
gi|81304306|sp|Q4UR41|SURA_XANC8 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|81796311|sp|Q8PCE1|SURA_XANCP RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|21111813|gb|AAM40108.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575072|gb|AAY50482.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 463
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 110/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
+L ++I + P+ S + RI ++ +V+ ++ + + +K Q +
Sbjct: 6 SVLLASLLVITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRDNQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ E SGI +N A+ G S + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVGRAEGSGIRVSDEELNRAIASIAQQNGTSVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQATTGSQYHLAHILV 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKVLTEYNARHILVRIGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + LR+
Sbjct: 305 QTEAQAKAKIDTLRAR 320
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQATTGSQYHLAHILVGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ +E+ + + EY R +L I DN+ +
Sbjct: 248 AQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKVLTEYNARHILVRIGDNQTE 307
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLL 250
Q K D +R+ D K +S+ + G + P F + +
Sbjct: 308 AQA---KAKIDTLRARIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 GLTDGAVSEPFRTQAGWHIVQRVGTRQTDVSAENQRAQIRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + +
Sbjct: 425 GEAFVSF 431
>gi|261338952|ref|ZP_05966810.1| hypothetical protein ENTCAN_05153 [Enterobacter cancerogenus ATCC
35316]
gi|288318779|gb|EFC57717.1| peptidylprolyl cis-trans isomerase SurA [Enterobacter cancerogenus
ATCC 35316]
Length = 428
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72
+L+ +V S+ + + ++ +N V+ + D+ + +KL + L
Sbjct: 7 LLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGEAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L GI
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIAKQNNMTPDQMRSRLAYDGISYA 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + + R D KL S G+ + +L F
Sbjct: 187 PTSDQAAEAESQARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 91/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+++ ++ E+ + +T V+ Q S E
Sbjct: 129 RNQIRKEMLISEVRNNEVRRR-VTILPQEVDALAKQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQ---------GIGDNHFKQYLAI-QSIWPDV----------- 147
S +++ I + +Q L Q W +
Sbjct: 188 TSDQAAEAESQARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + +NI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLK--PSPIMTDDQARA 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+++ K S+ + G + P F++ L+K S+
Sbjct: 306 KLEQISADIKSGKTSFANAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKMSKGQI 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASA 421
>gi|17545235|ref|NP_518637.1| peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum
GMI1000]
gi|17427526|emb|CAD14044.1| probable peptidyl-prolyl cis-trans isomerase (rotamase c) protein
[Ralstonia solanacearum GMI1000]
Length = 498
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 114/314 (36%), Gaps = 25/314 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q +
Sbjct: 69 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRQVPVRA 128
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 129 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLAQSGLA 188
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFS 186
+ +++ L + + + + K + EI + V+EY + +L
Sbjct: 189 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGSAASSGVQEYNVAQILVP 248
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQ 245
+ ++ Q + ++ +++ D KL + +S + + G+ L Q
Sbjct: 249 VAEDASAEQKAAARGKAESLLKQVQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQ 308
Query: 246 FQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKI 297
F N ++ + G + + DKR G I K ++ + PT
Sbjct: 309 FANAVVDLKPGQVVDQVIESPAGFHVLKLVDKRAQGTAITAKVAQTQVRHILIKTGPTMS 368
Query: 298 EKHEAEYVKKLRSN 311
+ LR
Sbjct: 369 ADDARRQLAGLRDR 382
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 58/154 (37%), Gaps = 4/154 (2%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ V + +R +L + ++++ + + + +++
Sbjct: 341 RAQGTAITAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFGDAARRYSQ 398
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G+ ++ L P+F+ + + P +Q G+ I + +R+ +
Sbjct: 399 DTSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVSQPVQSQFGLHLIQVEGRREAEVPVD 458
Query: 284 LKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ Y + K++ +++++LR +A + Y
Sbjct: 459 RQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 492
>gi|299067923|emb|CBJ39137.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Ralstonia
solanacearum CMR15]
Length = 496
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 111/314 (35%), Gaps = 24/314 (7%)
Query: 22 LIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQKINGELE----- 73
L+ + + S A S + +N ++IT ++ R L++ + +
Sbjct: 67 LLRGTLPGPSTASSAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRQIPARP 126
Query: 74 ---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 127 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLAQSGLA 186
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFS 186
+ +++ L + + + + K + EI + EY + +L
Sbjct: 187 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGSAASGGALEYNVAQILVP 246
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQ 245
+ ++ Q + ++ +++ D KL + +S + + G+ L Q
Sbjct: 247 VAEDASAEQKAAARGKAESLLKQVQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQ 306
Query: 246 FQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKI 297
F N ++ + G + + DKR G + K ++ + PT
Sbjct: 307 FANAVVDLKPGQVVDQVIESPAGFHVLKLVDKRAQGTAVTAKVAQTQVRHILIKTGPTMS 366
Query: 298 EKHEAEYVKKLRSN 311
+ LR
Sbjct: 367 ADDARRQLAGLRDR 380
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 58/154 (37%), Gaps = 4/154 (2%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ V + +R +L + ++++ + + + +++
Sbjct: 339 RAQGTAVTAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFGDAARRYSQ 396
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G+ ++ L P+F+ + + P +Q G+ I + +R+ +
Sbjct: 397 DNSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVSQPVQSQFGLHLIQVEGRREAEVPVD 456
Query: 284 LKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ Y + K++ +++++LR +A + Y
Sbjct: 457 RQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 490
>gi|163797530|ref|ZP_02191481.1| Parvulin-like peptidyl-prolyl isomerase [alpha proteobacterium
BAL199]
gi|159177279|gb|EDP61838.1| Parvulin-like peptidyl-prolyl isomerase [alpha proteobacterium
BAL199]
Length = 406
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 91/256 (35%), Gaps = 11/256 (4%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------KINGELEKIAVQELIVETLK 86
+ RI +N E+++ D+ R+ ++ + + L ++ L+ E ++
Sbjct: 7 AAAQEQQRIAAVVNDEILSMRDLRSRLRMVIVSSRLPATDETAQRLAPQVLRSLVDEQIQ 66
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
QE ++ + + + + L F F+ G+ + L Q W
Sbjct: 67 LQEAKRLNVAVTDQDLARARSEVEQRNNLKPGQFEEFVRSLGVDPETVIRQLKSQVAWTK 126
Query: 147 VVKNDFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+V+ F + E+ ++ + + + ++ ++ + N+ V++ +
Sbjct: 127 LVRRRFGNDVTISQEEVTDVLQRMEADAGKTQKRVSEIVLTV--DDPANEEQVRQLAERI 184
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
E +F++ + G ++L + P+ + K + + P T
Sbjct: 185 VEQLKAGANFGAVARQFSASANAAVGGDVGWVLAERMAPEIAEAVAKLETGQISAPVRTL 244
Query: 265 KGVEYIAICDKRDLGG 280
G + + D R +
Sbjct: 245 FGYHIVQVADSRVIAA 260
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 50/145 (34%), Gaps = 4/145 (2%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ ++ V +P N ++ Q+ + +A ++C + A +I
Sbjct: 262 DPLTATVDLKQVFLPVPPNAGKDVRPSQQALAEALSGSA---QNCTDFVELAKEIKSPVS 318
Query: 232 GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +L P + + TT GV + +C ++ + + +
Sbjct: 319 PDLGEMKVGELAPPLRERVAGLKVGETTGAVDLPNGVMVVMVCSRQAPPSNLPSPEQIRS 378
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
Q + E Y++ LR NA +
Sbjct: 379 QLEAQRFEILAQRYLRDLRRNAFVE 403
>gi|319765026|ref|YP_004128963.1| sura domain protein [Alicycliphilus denitrificans BC]
gi|317119587|gb|ADV02076.1| SurA domain protein [Alicycliphilus denitrificans BC]
Length = 471
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 56/306 (18%), Positives = 110/306 (35%), Gaps = 19/306 (6%)
Query: 25 FCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRI-ALLKLQKINGE-------LEK 74
++P S A + I +N E IT+ ++ +R + + G L K
Sbjct: 50 ATLLPPAGAASPAVRQADYIVAVVNSEPITNNEVRQRAERVAQQLSGQGAAMPPHEVLVK 109
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
++ LI+E ++ Q ++ GI D VN AR +S ++ L GI F
Sbjct: 110 EVLERLILEKIQVQLAKEGGIKVDDYAVNQAEQNVARQNDVSVDEMHRRLAADGISKERF 169
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR---EYLIRTVLFSIPDNK 191
++ L Q + V + D + ++E+ Q + E + +L +P+
Sbjct: 170 REELRNQLLALRVRERDVESRVRVSDLEVDQYLQDQQKTAGPGKMEINLGHILVKVPEGA 229
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLL 250
+ + +LR D L + S + + S G L D F +
Sbjct: 230 SPEEVARRAARAQEVLDKLRAGGDFGVLVQEYSDVPEGSGGGLLGLRPLDRYPELFVTAV 289
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYV 305
+++ + P + G + + D+ G ++ + E+ AE +
Sbjct: 290 QQAAVGSIVGPLRSPAGFHILKVVDRSQGGVPTMAVQSHARHILLRVGSGLSERQAAERL 349
Query: 306 KKLRSN 311
+ LR
Sbjct: 350 EDLRQR 355
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 5/157 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ Q + R +L + ++ +R++D + LR D L +
Sbjct: 312 VVDRSQGGVPTMAVQSHARHILLRV--GSGLSERQAAERLEDLRQRVLRGQADFATLARE 369
Query: 223 ASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLG- 279
S+ G + P+FQ L + P V++ GV I + ++R+
Sbjct: 370 YSQDGSAKDGGDLGWAGPGRYVPEFQEALNALRPGEISQPVVSRFGVHLIQLLERREAKL 429
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + K+++ ++++ R+ A + Y
Sbjct: 430 TQREQRDMVRDAVREKKLDEAFTTWIQEARARAYVEY 466
>gi|190572865|ref|YP_001970710.1| putative survival protein SurA [Stenotrophomonas maltophilia K279a]
gi|190010787|emb|CAQ44396.1| putative survival protein SurA precursor [Stenotrophomonas
maltophilia K279a]
Length = 447
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/319 (15%), Positives = 110/319 (34%), Gaps = 19/319 (5%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
F LL + + V + RI ++ +VI ++ + IA +K Q
Sbjct: 4 RFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVILQSELQRAIANIKAQYAGR 63
Query: 71 E--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
E L + ++ L++ L+ + SGI +N A+ G + +
Sbjct: 64 ENQLPPEDVLSRQVLERLVLVKLQVARAQGSGIRVSDQELNQAMNSIAQQNGSNLDALRQ 123
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
L GI N F+ + + + ++ + E E+ A K + +Y +
Sbjct: 124 RLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVSEGEVDAAL-KQQATVGNQYHLAH 182
Query: 183 VLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLES 240
+L ++PD +Q ++ D + + D N +++ + + G +
Sbjct: 183 ILVALPDGANADQIATGQKKADGVKALLDKGELDFNAAAVRYSDSPNALEGGDLGWRSLD 242
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQN 292
++ F +++K P G + + + + RD ++ +
Sbjct: 243 EIPQAFAQMMEKMKPGEVVGPIRGPSGFQLLKLVEVRDASATAGASTVTEYHGRHILVRV 302
Query: 293 TPTKIEKHEAEYVKKLRSN 311
+ + + LR+
Sbjct: 303 DDHQTDAAAKAKIDTLRAR 321
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 7/160 (4%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+E+ TV EY R +L + D++ K D +R+ D +
Sbjct: 276 VEVRDASATAGASTVTEYHGRHILVRVDDHQT---DAAAKAKIDTLRARIAGGADFETVA 332
Query: 221 KFASKIHD--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
K +S+ ++ G + P F + Q + P+ T G + R
Sbjct: 333 KESSEDNNSKGQGGDLGWFPADAFGPAFGQQVAAIQDGGVSQPFRTDAGWHILQRVATRQ 392
Query: 278 LGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+A + K+E ++++LR A + +
Sbjct: 393 TDVTNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYVSF 432
>gi|121956451|sp|Q8Y220|SURA_RALSO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 496
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 114/314 (36%), Gaps = 25/314 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q +
Sbjct: 67 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRQVPVRA 126
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 127 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLAQSGLA 186
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFS 186
+ +++ L + + + + K + EI + V+EY + +L
Sbjct: 187 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGSAASSGVQEYNVAQILVP 246
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQ 245
+ ++ Q + ++ +++ D KL + +S + + G+ L Q
Sbjct: 247 VAEDASAEQKAAARGKAESLLKQVQGGADFAKLARDSSGAPEAAQGGELGLRPIGRLPAQ 306
Query: 246 FQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKI 297
F N ++ + G + + DKR G I K ++ + PT
Sbjct: 307 FANAVVDLKPGQVVDQVIESPAGFHVLKLVDKRAQGTAITAKVAQTQVRHILIKTGPTMS 366
Query: 298 EKHEAEYVKKLRSN 311
+ LR
Sbjct: 367 ADDARRQLAGLRDR 380
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 58/154 (37%), Gaps = 4/154 (2%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ V + +R +L + ++++ + + + +++
Sbjct: 339 RAQGTAITAKVAQTQVRHILIKTGPTMSADDA--RRQLAGLRDRIVHGYDFGDAARRYSQ 396
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G+ ++ L P+F+ + + P +Q G+ I + +R+ +
Sbjct: 397 DTSASAGGELGWVSPGQLVPEFEQAMGLLKPGEVSQPVQSQFGLHLIQVEGRREAEVPVD 456
Query: 284 LKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ Y + K++ +++++LR +A + Y
Sbjct: 457 RQRDYARSVIREQKVQAAYEDWLRQLRDSAHVEY 490
>gi|260878025|ref|ZP_05890380.1| chaperone protein SurA [Vibrio parahaemolyticus AN-5034]
gi|308089886|gb|EFO39581.1| chaperone protein SurA [Vibrio parahaemolyticus AN-5034]
Length = 427
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 107/263 (40%), Gaps = 15/263 (5%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAV 77
++ + + ++ +N VI DI+ + L+ L++ V
Sbjct: 11 TLLSCGAVAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGKSLPSASVLKEQVV 70
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++LI++TL+ QE ++ G+ D N +N + ARN S E+ ++ + +G+ F++
Sbjct: 71 EKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNNQSVEELAASVQAEGLSYPEFREQ 130
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQ 195
+ + + + L E+ + ++ T +Y I + D + +++
Sbjct: 131 IRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQLRFTDGQDKSE 190
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KS 253
Q A +L D ++ ++ + G ++ + ++ F + +K ++
Sbjct: 191 VEAQ---AKALVKKLNDGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQN 247
Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276
+ + P+ + G + I D +
Sbjct: 248 KGSIIGPFRSGVGFHILKIEDVK 270
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 15/192 (7%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L P
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHILIK-PTV 291
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQ 245
L ++G + E R+ + AS+ G+ Y P+
Sbjct: 292 ILSDEGAKNQ----LNEFVRRIKAGEATFAQLASQYSQDPGSAAQDGELGYQTPDLYVPE 347
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAE 303
F++ ++ + + P+ T G + + D+R + + A+K K +
Sbjct: 348 FKHQVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGA 407
Query: 304 YVKKLRSNAIIH 315
++++LR++A +
Sbjct: 408 WMQELRASAFVE 419
>gi|188992953|ref|YP_001904963.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris
str. B100]
gi|167734713|emb|CAP52923.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris]
Length = 463
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 110/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
+L ++I + P+ S + RI ++ +V+ ++ + + +K Q +
Sbjct: 6 SVLLASLLVITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRDNQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ E SGI +N A+ G S + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVGRAEGSGIRVSDEELNRAIASIAQQNGTSVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQATTGSQYHLAHILV 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKVVTEYNARHILVRIGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + LR+
Sbjct: 305 QTEAQAKAKIDTLRAR 320
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 92/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQATTGSQYHLAHILVGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ +E+ + V EY R +L I DN+ +
Sbjct: 248 AQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKVVTEYNARHILVRIGDNQTE 307
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLL 250
Q K D +R+ D K +S+ + G + P F + +
Sbjct: 308 AQA---KAKIDTLRARIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 GLTDGAVSEPFRTQAGWHIVQRVGTRQTDVSAENQRAQIRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + +
Sbjct: 425 GEAFVSF 431
>gi|229530289|ref|ZP_04419677.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae 12129(1)]
gi|229332062|gb|EEN97550.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae 12129(1)]
Length = 431
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 108/276 (39%), Gaps = 15/276 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
K+G+ F++ + + D + L E+ A + +Y I
Sbjct: 121 AKEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + D + ++ + + + L+ D ++ ++ + G ++ + +
Sbjct: 181 IQLRVDDGQDKSAAET---LANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEE 237
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F + +K +++ + P+ + G + I D +
Sbjct: 238 MPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVK 273
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 414 ELRASAFVE 422
>gi|71275093|ref|ZP_00651380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Dixon]
gi|71899689|ref|ZP_00681842.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
gi|170731077|ref|YP_001776510.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12]
gi|71163902|gb|EAO13617.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Dixon]
gi|71730557|gb|EAO32635.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
gi|167965870|gb|ACA12880.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12]
Length = 468
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/325 (13%), Positives = 115/325 (35%), Gaps = 24/325 (7%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66
++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q
Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60
Query: 67 KINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+ E L++ ++ LI+ L+ + +GI + +N A N S +
Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L +GI F+Q + + + + + E E+ + + +Y
Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQANSGAQY 178
Query: 179 LIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQY 236
++ +L ++PD Q QK+I + + +++ + + G +
Sbjct: 179 HLQHILVALPDGATSEQIAVAQKKINGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ---- 291
++ F +++ P G + + + + RD A ++ +
Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVRDSAAAAAGPRQMATEYHAR 298
Query: 292 -----NTPTKIEKHEAEYVKKLRSN 311
T + E + LR+
Sbjct: 299 HILVRITEKQKEAQAKAKIDTLRAR 323
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 7/161 (4%)
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+E+ A EY R +L I + + + Q K D +R+ D
Sbjct: 273 LKLVEVRDSAAAAAGPRQMATEYHARHILVRITEKQKEAQA---KAKIDTLRARIAGGAD 329
Query: 216 CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+ + +S+ + S G + F N +K + N + P+ + G +
Sbjct: 330 FQTVARESSEDANNSNQGGDLGWFPSDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQR 389
Query: 273 CDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
R +A + K+E+ ++++LRS A
Sbjct: 390 LGTRQTDVTKENQRAQIRDTIGQRKLEESYERFLRELRSEA 430
>gi|213161291|ref|ZP_03347001.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
Length = 399
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R ++ R D KL S G+ + +L F
Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/310 (12%), Positives = 86/310 (27%), Gaps = 74/310 (23%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++E + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + ++I+V E R +L + + N + ++++
Sbjct: 267 ILKVNDLRGQSQSISVTEVHARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKA 286
+ A +
Sbjct: 385 KVDKTDAAQK 394
>gi|28897112|ref|NP_796717.1| survival protein SurA [Vibrio parahaemolyticus RIMD 2210633]
gi|153838965|ref|ZP_01991632.1| chaperone SurA [Vibrio parahaemolyticus AQ3810]
gi|260361686|ref|ZP_05774713.1| chaperone protein SurA [Vibrio parahaemolyticus K5030]
gi|260896920|ref|ZP_05905416.1| chaperone protein SurA [Vibrio parahaemolyticus Peru-466]
gi|260903392|ref|ZP_05911787.1| chaperone protein SurA [Vibrio parahaemolyticus AQ4037]
gi|81728608|sp|Q87ST4|SURA_VIBPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|28805321|dbj|BAC58601.1| survival protein SurA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747553|gb|EDM58485.1| chaperone SurA [Vibrio parahaemolyticus AQ3810]
gi|308088746|gb|EFO38441.1| chaperone protein SurA [Vibrio parahaemolyticus Peru-466]
gi|308109029|gb|EFO46569.1| chaperone protein SurA [Vibrio parahaemolyticus AQ4037]
gi|308115514|gb|EFO53054.1| chaperone protein SurA [Vibrio parahaemolyticus K5030]
gi|328471910|gb|EGF42787.1| survival protein SurA [Vibrio parahaemolyticus 10329]
Length = 427
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 107/263 (40%), Gaps = 15/263 (5%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAV 77
++ + + ++ +N VI DI+ + L+ L++ V
Sbjct: 11 TLLSCGAVAAPVELDKVAVIVNDGVILQSDINTAMKTLQANARQSGKSLPSASVLKEQVV 70
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++LI++TL+ QE ++ G+ D N +N + ARN S E+ ++ + +G+ F++
Sbjct: 71 EKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNNQSVEELAASVQAEGLSYPEFREQ 130
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQ 195
+ + + + L E+ + ++ T +Y I + D + +++
Sbjct: 131 IRKEIAASEARNALVRRRINILPAEVDSLADQLAKETNATVQYKIGHIQLRFTDGQDKSE 190
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KS 253
Q A +L D ++ ++ + G ++ + ++ F + +K ++
Sbjct: 191 VEAQ---AKALVKKLNDGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQN 247
Query: 254 QNNTTNPYVTQKGVEYIAICDKR 276
+ + P+ + G + I D +
Sbjct: 248 KGSIIGPFRSGVGFHILKIEDVK 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 70/189 (37%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHIL--IKPT 290
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + +K++ + +L S+ + G+ Y P+F++
Sbjct: 291 VILSDEGAKKQLNEFVRRIKAGEATFAQLASQYSQDPGSAAQDGELGYQTPDLYVPEFKH 350
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + + P+ T G + + D+R + + A+K K + +++
Sbjct: 351 QVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGAWMQ 410
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 411 ELRASAFVE 419
>gi|149191632|ref|ZP_01869876.1| parvulin-like peptidyl-prolyl isomerase [Vibrio shilonii AK1]
gi|148834532|gb|EDL51525.1| parvulin-like peptidyl-prolyl isomerase [Vibrio shilonii AK1]
Length = 419
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 97/261 (37%), Gaps = 15/261 (5%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQE 79
+ + + R+R +N VI DI L + +++ + +
Sbjct: 1 MALHAIAEPVELDRVRVIVNDGVILQSDIDSATKTLTANARKNDQELPSADIIQEQILDK 60
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI+E L+ QE ++ G+ D N + A+N + E + ++G+ F++ +
Sbjct: 61 LILEKLQLQEADRIGVRIDDNRLESTLNDIAKNNNQTIEQLRQTVREEGLTWEAFREQIR 120
Query: 140 IQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + E++ A ++ Y IR + D
Sbjct: 121 DEIAASEARNAMVRQRINILPAEVDNLAELLAKESDATVTYKIRHIQLRFNDG---EDKS 177
Query: 198 VQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQN 255
VQ++ +RL+ +D + ++ + G ++ + ++ F + +K +++
Sbjct: 178 VQEQQAKDLVARLKSGEDFATMAYTYSKGPKALEGGDWGWMRKEEMPTIFADQIKMQTKG 237
Query: 256 NTTNPYVTQKGVEYIAICDKR 276
P+ + G + I D +
Sbjct: 238 TIIGPFRSGVGFHILKIEDVK 258
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 74/189 (39%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q+ + F G ++I K ++ ++V E R +L I
Sbjct: 224 PTIFADQIKMQT--KGTIIGPFRSGVGFHILKIEDVK-GLETVSVTEVNARHIL--IKPT 278
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + VQ+ + + ++ + S+ ++ G+ Y P+F++
Sbjct: 279 VILSDEGVQRELNNIIAKVQSGESTFAEMAEQYSQDPGSAVQGGELGYQTPELYVPEFKH 338
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVK 306
++ + P+ T G + + D+RD+ + + + K + + +++
Sbjct: 339 QVETLPIGQISKPFKTVHGWHIVEVLDRRDVDKTGSAMQNRAYRILFNRKFNEEASAWIQ 398
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 399 ELRASAFVE 407
>gi|322713110|gb|EFZ04681.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
Length = 428
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E +R +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLRHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R ++ R D KL S G+ + +L F
Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++E + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDASTELNLRHILIALPENPTSEQVNDAQRQAESIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + ++I+V E R +L + + N + ++++
Sbjct: 267 ILKVNDLRGQSQSISVTEVHARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ A + + + K + A ++++ R++A
Sbjct: 385 KVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|260775523|ref|ZP_05884420.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio coralliilyticus
ATCC BAA-450]
gi|260608704|gb|EEX34869.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio coralliilyticus
ATCC BAA-450]
Length = 431
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 101/277 (36%), Gaps = 17/277 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+KL + +I ++ +N V+ DI + ++
Sbjct: 1 MKLWKQTLLGLIAASQLSFVQAEPVELDKVAVIVNSGVVLQSDIETSLKTIRANAKKNNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + ++LIV+T+++QE E+ G+ D N +N + A+N + + ++ +
Sbjct: 61 SLPDEATLREQVTEKLIVDTIQQQEAERIGVRIDDNRLNEAIDEIAKNNNQTLQQLNTSI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
++G+ F++ + + + + L E+ + T +Y I
Sbjct: 121 AEEGLSYAQFREQVRKEIAANEARNALVRRRINILPAEVDNLANILAKETNATVQYKIGH 180
Query: 183 VLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ + D K + + +K+ + ++ + G ++ +
Sbjct: 181 IQLRVNDGDDKAAIEEKANQIVKELNQG----SDFSTMAYTYSKGPKALQGGDWGWMRKE 236
Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
++ F + + +++ + P+ + G + I D +
Sbjct: 237 EMPTIFADQINLQNKGSIIGPFRSGVGFHILKIEDVK 273
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 60/151 (39%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ + V E R +L I + + VQK + D ++ + S+
Sbjct: 274 GLETVAVTEVNARHIL--IKPTVILSDEGVQKELLDITRRIQSGKATFAEMAQQYSQDPG 331
Query: 229 VSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ Y P+F++ + + P+ T G + + D+R++ + AL
Sbjct: 332 SAAQQGELGYQTSDLYVPEFKHQVDTLPVGQISEPFKTVHGWHIVEVMDRREVDRTDSAL 391
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + + +++++R++A +
Sbjct: 392 KNKAYRIIFNRKFNEEASAWLQEIRASAFVE 422
>gi|295098567|emb|CBK87657.1| Parvulin-like peptidyl-prolyl isomerase [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 428
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------QKINGEL 72
+L+ +V S+ + + ++ +N V+ + D+ + +KL + L
Sbjct: 7 LLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGEAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+T ++ A+ ++ + S L GI
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVTISDEQLDQAIANIAKQNNITPDQMRSRLAYDGISYA 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S G+ + +L F
Sbjct: 187 PTSDQAAEAESQARAIVEQARNGDDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/338 (12%), Positives = 104/338 (30%), Gaps = 61/338 (18%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90
V+ + I IT + R+A + +E+++ ++ E+
Sbjct: 89 VTISDEQLDQAIANIAKQNNITPDQMRSRLAYDGISYA--TYRNQIRKEMLISEVRNNEV 146
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAE------------------------DFSSFLDK 126
+ +T V+ Q S E + +++
Sbjct: 147 RRR-VTILPQEVDALAKQVGNQNDASTELNLSHILIPLPENPTSDQAAEAESQARAIVEQ 205
Query: 127 Q---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGN 158
I + +Q L Q W + + G
Sbjct: 206 ARNGDDFGKLAITYSADQQALKGGQMGWGRIQELPSLFAQALSTAKKGDIVGPIRSGVGF 265
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+++ + + +NI+V E R +L + + + +++ +K
Sbjct: 266 HILKVNDLRGQSQNISVTEVHARHILLK--PSPIMTDDQARAKLEQIAADIKSGKTTFDK 323
Query: 219 LEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
K S+ + G + P F++ L+K ++ + P + G I + D
Sbjct: 324 AAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQMSPPVHSSFGWHLIQLMDT 383
Query: 276 RDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
R++ A + + + K + A ++++ R++A
Sbjct: 384 RNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASA 421
>gi|91227110|ref|ZP_01261594.1| survival protein SurA [Vibrio alginolyticus 12G01]
gi|269964662|ref|ZP_06178900.1| survival protein SurA [Vibrio alginolyticus 40B]
gi|91188762|gb|EAS75049.1| survival protein SurA [Vibrio alginolyticus 12G01]
gi|269830561|gb|EEZ84782.1| survival protein SurA [Vibrio alginolyticus 40B]
Length = 427
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 102/265 (38%), Gaps = 19/265 (7%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAV 77
++ + + ++ +N V+ DI + L+ L++ V
Sbjct: 11 TLLSCGAVAAPVEIDKVAVIVNDGVVLQSDIETAMKTLQANARQSGKSLPSTSVLKEQVV 70
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++LI++TL+ QE ++ G+ D N +N + ARN S E ++ ++ +G+ F++
Sbjct: 71 EKLIIDTLQGQEADRIGVRIDDNRLNQAIAEIARNNEQSVEQLAASVESEGLSYPEFREQ 130
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + L E+ A + + +Y I + + +
Sbjct: 131 IRKEIAASEARNALVRRRINILPAEVDSLAEQLSQETNATVQYKIGHIQL-----RFSDD 185
Query: 196 GFVQKRIKDAEESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK- 251
+A+ +L + + ++ + G ++ + ++ F + +K
Sbjct: 186 KEKSAVEAEAKALAKKLNEGADFTEMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQIKM 245
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKR 276
+++ + P+ + G + I D +
Sbjct: 246 QNKGSIIGPFRSGVGFHILKIEDVK 270
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 70/189 (37%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 236 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHIL--IKPT 290
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + +K++ + +L S+ + G+ Y P+F++
Sbjct: 291 VILSDEGAKKQLNEFVRRIKAGEATFAQLATQYSQDPGSAAQDGELGYQTPDLYVPEFKH 350
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + + P+ T G + + D+R + + A+K K + +++
Sbjct: 351 QVETLPVGSISEPFKTVHGWHIVEVLDRRQVDRTDSAMKNKAYRILFNRKFNEEAGAWMQ 410
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 411 ELRASAFVE 419
>gi|312883922|ref|ZP_07743639.1| survival protein SurA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368380|gb|EFP95915.1| survival protein SurA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 428
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 105/275 (38%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + + + + ++ +N VI DI + LK+
Sbjct: 1 MKLWNYIILAFLSLNINHAVAQQEVALDQVAVIVNDGVILQSDIKTAMKTLKINAKKEGQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
LE+ ++LI++T+++Q+ ++ G+ D +N + A+N + + L
Sbjct: 61 TLPSNSVLEEQVTEKLILDTIQQQQADRIGVKVDDGRLNEAIEEIAKNNQQTIAELKEEL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
K+G+ F+ + + + + E++ A+ ++ +Y I
Sbjct: 121 QKEGLNYALFRDQVRKEISVSEARNAIVRRRINILPSEVDHLASLLSQESSATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ + D ++ ++++ D + F+ + G ++ + ++
Sbjct: 181 IQLRVEDGD--DKAQIKQQAMDIVSELEKGADFKTMAYTFSKGPKALKGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ + P+++ G + I D +
Sbjct: 239 PTIFADEIKMQNKGSIIGPFMSGSGFHILKIEDVK 273
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 58/151 (38%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-- 226
++ + V E R +L I + + + V+K + + + +++ K S+
Sbjct: 274 GLQTVAVTEVNARHIL--IKPSIILSDEGVKKELIEITKRIKSGEVTFSQMAKQYSQDTG 331
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
G+ + P+F++ L + P+ T G + + ++ + + +L
Sbjct: 332 SGTQGGELGFHTSDIYVPEFKHQLDTLPIGQISAPFKTVHGWHIVEVTGRKQVDRTDASL 391
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + +++++R+ A +
Sbjct: 392 KNKAYRIIFNRKFNEEAGAWLQEIRAGAFVE 422
>gi|296101217|ref|YP_003611363.1| peptidyl-prolyl cis-trans isomerase SurA [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295055676|gb|ADF60414.1| peptidyl-prolyl cis-trans isomerase SurA [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 428
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ +V S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L GI +
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGISYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S G+ + +L F
Sbjct: 187 PTSDQAAEAESQARAIVEQARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/337 (12%), Positives = 101/337 (29%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+++ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGISYSTYRNQIRKEMLISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAE------------------------DFSSFLDKQ 127
+ +T V+ Q S E + +++
Sbjct: 148 RR-VTILPQEVDALAKQVGNQNDASTELNLSHILIPLPENPTSDQAAEAESQARAIVEQA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGSDFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + +NI+V E R +L + + + +++
Sbjct: 267 ILKVNDLRGQSQNISVTEVHARHILLK--PSPIMTDDQARAKLQQIAADIKSGKTSFANA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L+K ++ + P + G I + D R
Sbjct: 325 AKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQMSAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
++ A + + + K + A ++++ R++A
Sbjct: 385 NVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASA 421
>gi|148262225|ref|YP_001228931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
gi|146395725|gb|ABQ24358.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
Length = 345
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 57/326 (17%), Positives = 114/326 (34%), Gaps = 21/326 (6%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQK 67
S + ++T+ I+ + ++ + A + S I +N ++IT ++ + AL+ +
Sbjct: 19 YSWISQTMSTFVKTIVIIAIALLPLTARAELVSGIAAIVNDDIITTYEVDRDAALIGKEM 78
Query: 68 IN---------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L K A+ LI + L +Q+I++ I V + L+ E
Sbjct: 79 EKRAPAEAADKAALRKTALSRLIDKKLIEQKIKELDIRVPEEEVRQSIEDVKKQNKLTQE 138
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQS----IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ L QG+ + +K L Q + V+ + + AN+ K
Sbjct: 139 ALVAALAAQGLSFDQYKAQLKEQLERLRLMSQEVRAKIQVGEREMREYYDANR--AKYGE 196
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IG 232
R + F I +++ + KD +L K S + G
Sbjct: 197 EEFTRARQIYFKIDKKAAESEITRVTAAAANVLQEAKSGKDFAELAKKYSDDPAAAKDGG 256
Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLS 289
+ D+ P+ + L ++ T G+ I + ++ + +KA +
Sbjct: 257 ELGTFKRGDMIPEIERALDTMKPGEISDLVRTPAGIHIIKLEERTKGKAKPFEEVKAEIE 316
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315
K E ++V LR A I
Sbjct: 317 DFLYKKKSEDRFNQWVNDLRKGAAIE 342
>gi|300692473|ref|YP_003753468.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Ralstonia
solanacearum PSI07]
gi|299079533|emb|CBJ52211.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Ralstonia
solanacearum PSI07]
Length = 475
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/314 (17%), Positives = 110/314 (35%), Gaps = 25/314 (7%)
Query: 23 IIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIAL----LKLQKINGELEK 74
++ +P S S A S + +N ++IT ++ R L L+ Q
Sbjct: 46 LLRGTLPGPSTASGAARSQLVDEVVAVVNTDIITRRELLDRADLVERTLQSQNRPMPARA 105
Query: 75 ----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++LI+E ++ Q ++SGI V+ A+ LS S L + G+
Sbjct: 106 DLLGEVLEQLILERVQAQTAKESGIRVSDADVDRAVESVAQRNNLSVSQLKSKLVQSGLA 165
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFS 186
+ +++ L + + + + K + EI + +EY + +L
Sbjct: 166 YDKYREDLRQEILLARLRDREVDSKVQVFDGEIDNFLAQQGGAAASGGSQEYNVAQILVP 225
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQ 245
+ ++ Q + + +++ D KL + S + + G+ L Q
Sbjct: 226 VAEDASAEQKAAARGKAEGLLKQVQGGADFAKLARDHSGAPEAAQGGELGLRPIGRLPAQ 285
Query: 246 FQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKI 297
F N ++ + G + + DKR G I K ++ + PT
Sbjct: 286 FANAVVDLKPGQVVGQVIESPAGFHVLKLVDKRVQGTAITAKVAQTQVRHILIKTGPTMP 345
Query: 298 EKHEAEYVKKLRSN 311
+ LR
Sbjct: 346 ADDARRQLAGLRDR 359
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 59/157 (37%), Gaps = 5/157 (3%)
Query: 163 IPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ Q V + +R +L + ++++ + + + +
Sbjct: 315 VDKRVQGTAITAKVAQTQVRHILIKTGPTMPADDA--RRQLAGLRDRIVHGYDFGDAARR 372
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
++ + G+ ++ L P+F+ + + P +Q GV I + +R+
Sbjct: 373 YSQDASASAGGELGWVSPGQLVPEFEQAMNLLKPGEVSQPVQSQFGVHLIQVEGRREAEV 432
Query: 281 EIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + Y + KI+ +++++LR +A + Y
Sbjct: 433 PVDRQRDYARSAIREQKIQAAYEDWLRQLRDSAHVEY 469
>gi|262044914|ref|ZP_06017956.1| peptidylprolyl cis-trans isomerase SurA [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259037641|gb|EEW38870.1| peptidylprolyl cis-trans isomerase SurA [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 428
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ + ++ A+ ++ + S L +GI N
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISEDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + E+E A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
++ + ++ + R + KL S G+ + +L F
Sbjct: 187 PTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+++ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMLISEVRNNEVRRR-ITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQ---------GIGDNHFKQYLAI-QSIWPDV----------- 147
+S +++ I + +Q L Q W +
Sbjct: 188 TSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD--NKLQNQGFV 198
+ G +++ + +NI+V E R +L N Q Q +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKL 307
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++ + + ++ + + + G + P F++ L++ ++ T
Sbjct: 308 EQIAAEIKSGKITFAQAAKTYSEDPGSANQ--GGDLGWATPDIFDPAFRDALMRLNKGQT 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + A ++++ R++A
Sbjct: 366 SGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|289663554|ref|ZP_06485135.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 463
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 108/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I I P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ LI+ L+ + SGI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQAATGSQYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDA-EESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D + + D +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRVGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQAATGSQYHLAHILIGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ +E+ + V EY R +L + DN Q
Sbjct: 248 AQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRVGDN--Q 305
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLL 250
+ + +I R+ D K +S+ + G + P F + +
Sbjct: 306 TEAQAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 GLADGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + Y
Sbjct: 425 GEAYVSY 431
>gi|77165200|ref|YP_343725.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani
ATCC 19707]
gi|254434050|ref|ZP_05047558.1| SurA N-terminal domain family [Nitrosococcus oceani AFC27]
gi|122070652|sp|Q3JAF1|SURA_NITOC RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|76883514|gb|ABA58195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani
ATCC 19707]
gi|207090383|gb|EDZ67654.1| SurA N-terminal domain family [Nitrosococcus oceani AFC27]
Length = 426
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 107/272 (39%), Gaps = 12/272 (4%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE---- 71
++ IF + + + RI +N +++ + ++ + + ++ Q G
Sbjct: 1 MGRVLVTIFVLFWPIGSFAAINLDRIVAVVNEDIVLESELEQMVRTVQDQLAAQGTSLPP 60
Query: 72 ---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
LE+ ++ L++E L+ Q ++GI T+N + A++ GL+ F + L++ G
Sbjct: 61 GYVLERQVLERLVMEQLQLQLAARTGIQVGDETLNEALGRIAQDNGLTLSQFRNVLEQDG 120
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFS 186
F++ + + I + K + + + EI K + +Y + +L +
Sbjct: 121 YDFPAFRENIRKELIISQLHKREVNDRVSVSKAEIDNFLTNQKKRGNQDAQYHLAHILIT 180
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQ 245
+P+ Q K + +LR D K ++ + G + L
Sbjct: 181 VPEAASPEQVQAAKAKAEQVLQQLREGADFQKVAVTYSDGQQALEGGDLGWRKMGQLPTL 240
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
F +++ + Q + + + G + + D R
Sbjct: 241 FVDVVPQLQAGDISKLIRSPSGFHIVKLLDYR 272
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 98/300 (32%), Gaps = 60/300 (20%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL----------------- 115
+ +ELI+ L K+E+ ++ ++ F +
Sbjct: 127 RENIRKELIISQLHKREVNDR-VSVSKAEIDNFLTNQKKRGNQDAQYHLAHILITVPEAA 185
Query: 116 SAEDFSSFLDKQGIGDNHFK-----QYLAI------------QSIWPD-------VVKND 151
S E + K + Q +A+ W V
Sbjct: 186 SPEQVQAAKAKAEQVLQQLREGADFQKVAVTYSDGQQALEGGDLGWRKMGQLPTLFVDVV 245
Query: 152 FMLKYGNLEMEIPAN-----------KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
L+ G++ I + + + + V + R +L ++L ++ VQ
Sbjct: 246 PQLQAGDISKLIRSPSGFHIVKLLDYRGEGQQQLVTQTQARHILLRA--DELASEREVQL 303
Query: 201 RIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257
R+ + R+ D ++L + S K + G ++ + P+F+ ++
Sbjct: 304 RLSQLRQ-RILSGDDFSELAQAHSDDKASALKGGDLGWVSPGQMIPRFEEAMRSLEPGEI 362
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ P+ TQ G + + D+R + K+E+ ++++LR A + Y
Sbjct: 363 SEPFKTQFGWHVVQVLDRRQENMTEEFNRNRAKMEIRQRKVEEELENWLRQLRDEAYVEY 422
>gi|158429505|pdb|2PV3|A Chain A, Crystallographic Structure Of Sura Fragment Lacking The
Second Peptidyl-Prolyl Isomerase Domain Complexed With
Peptide Nftlkfwdifrk
gi|158429506|pdb|2PV3|B Chain B, Crystallographic Structure Of Sura Fragment Lacking The
Second Peptidyl-Prolyl Isomerase Domain Complexed With
Peptide Nftlkfwdifrk
Length = 299
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/249 (17%), Positives = 91/249 (36%), Gaps = 6/249 (2%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L ++ LI++ + Q +K G+ ++ A+ ++ + S L G+
Sbjct: 44 ATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGL 103
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSI 187
N ++ + + I +V N+ + L E+ A + +N E + +L +
Sbjct: 104 NYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPL 163
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF 246
P+N +Q + A + R D KL S + G+ + +L F
Sbjct: 164 PENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIF 223
Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA--QNTPTKIEKHEAE 303
L + + P + G + + D R I+ A K + A
Sbjct: 224 AQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISAAQKDRAYRMLMNRKFSEEAAS 283
Query: 304 YVKKLRSNA 312
++++ R++A
Sbjct: 284 WMQEQRASA 292
>gi|161612428|ref|YP_001586393.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|161361792|gb|ABX65560.1| hypothetical protein SPAB_00117 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 428
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R + R D KL S G+ + +L F
Sbjct: 187 PTSEQVNDAQRQAENIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++E + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAENIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + ++I+V E R +L + + N + ++++
Sbjct: 267 ILKVNDLRGQSQSISVTEVHARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ A + + + K + A ++++ R++A
Sbjct: 385 KVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|285019522|ref|YP_003377233.1| ppic-type peptidyl-prolyl cis-trans isomerase [Xanthomonas
albilineans GPE PC73]
gi|283474740|emb|CBA17239.1| probable ppic-type peptidyl-prolyl cis-trans isomerase protein
[Xanthomonas albilineans]
Length = 455
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/320 (12%), Positives = 111/320 (34%), Gaps = 22/320 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQKIN 69
+ + F+L + I + + + + RI ++ +V+ ++ + + +K Q
Sbjct: 1 MTKTLSAFLLAVLAIAGVSAQAAVQQTQPLDRIAAVVDEDVVLQSELDRAVRNVKAQYAG 60
Query: 70 GE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ L + ++ L++ L+ +GI + +N A+ +
Sbjct: 61 RDTQLPPDNVLRRQVLERLVLVKLQVARANSTGIHVSDDELNRAIASIAQQNNTDVDGLR 120
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+ G+ + F+ + + + ++ + E E+ A + T +Y +
Sbjct: 121 KKIAADGMSYDDFRNSVRDEITVQRLRQSFAQSRINVSESEVDAAL-TQQATTGTQYHLA 179
Query: 182 TVLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLE 239
+L +P+ Q + +I + + D N +++ + + G +
Sbjct: 180 HILVGLPEGATAEQIKTAQGKIDGVKSLIDKGEIDFNAAAVRYSDSPNALEGGDLGWRSL 239
Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQ 291
++ F L+ P G + + + + RD K ++ A+
Sbjct: 240 DEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEVRDAAANPEKKTVTEYHARHILAR 299
Query: 292 NTPTKIEKHEAEYVKKLRSN 311
+ + + ++ LR+
Sbjct: 300 VSDAQPDAAAKAKIETLRAR 319
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 67/305 (21%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GLS 116
+ E+ V+ L++ + I + V+ Q A G +
Sbjct: 132 DFRNSVRDEITVQRLRQSFAQSR-INVSESEVDAALTQQATTGTQYHLAHILVGLPEGAT 190
Query: 117 AEDFSSFLDK-QGIGDNHFKQYL-----------------AIQSIWPDV--VKNDFMLKY 156
AE + K G+ K + W + + N F
Sbjct: 191 AEQIKTAQGKIDGVKSLIDKGEIDFNAAAVRYSDSPNALEGGDLGWRSLDEIPNAFAQLI 250
Query: 157 GNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+++ +E+ + TV EY R +L + D +
Sbjct: 251 RDMKPGQVAGPLRGPSGFQLLKLVEVRDAAANPEKKTVTEYHARHILARVSDAQPDAAA- 309
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESDLHPQFQNLLKK 252
E R R+ +K A + D + G + F + ++
Sbjct: 310 ----KAKIETLRARIAGG-ADFQKVAKEASDDTNSRNQGGDLGWFPIDAFGADFGHQVES 364
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
Q + P+ T+ G + +R +A + K+E+ +++++R
Sbjct: 365 LQDGQISPPFRTEAGWHILQRVGERQTDVTSDTQRAQVRETIGRRKLEEEYNRFLQEMRG 424
Query: 311 NAIIH 315
A +
Sbjct: 425 EAYVD 429
>gi|16759087|ref|NP_454704.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763482|ref|NP_459097.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29140637|ref|NP_803979.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56412363|ref|YP_149438.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|167550725|ref|ZP_02344482.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|167989955|ref|ZP_02571055.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168230361|ref|ZP_02655419.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168234847|ref|ZP_02659905.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168243501|ref|ZP_02668433.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168464364|ref|ZP_02698267.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|168820926|ref|ZP_02832926.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194444526|ref|YP_002039322.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451624|ref|YP_002044060.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194469029|ref|ZP_03075013.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194736155|ref|YP_002113109.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197248833|ref|YP_002145076.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197263512|ref|ZP_03163586.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197361300|ref|YP_002140935.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|198244102|ref|YP_002214044.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200386716|ref|ZP_03213328.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|204926901|ref|ZP_03218103.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205351432|ref|YP_002225233.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207855605|ref|YP_002242256.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213427535|ref|ZP_03360285.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213648902|ref|ZP_03378955.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|224581934|ref|YP_002635732.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|238911150|ref|ZP_04654987.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|289826182|ref|ZP_06545294.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|81677737|sp|Q5PDE6|SURA_SALPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|81706931|sp|Q7CR87|SURA_SALTY RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|81766233|sp|Q8XEV3|SURA_SALTI RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|25513082|pir||AH0513 survival protein SurA precursor [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16418589|gb|AAL19056.1| peptidyl-prolyl cis-trans isomerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16501377|emb|CAD01248.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29136261|gb|AAO67828.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56126620|gb|AAV76126.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|194403189|gb|ACF63411.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409928|gb|ACF70147.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194455393|gb|EDX44232.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194711657|gb|ACF90878.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195632865|gb|EDX51319.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197092775|emb|CAR58200.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212536|gb|ACH49933.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197241767|gb|EDY24387.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197291654|gb|EDY31004.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|197938618|gb|ACH75951.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199603814|gb|EDZ02359.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|204323566|gb|EDZ08761.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205271213|emb|CAR36001.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205324462|gb|EDZ12301.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205331363|gb|EDZ18127.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205335129|gb|EDZ21893.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205337413|gb|EDZ24177.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|205342524|gb|EDZ29288.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|206707408|emb|CAR31681.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224466461|gb|ACN44291.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|267991763|gb|ACY86648.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301156721|emb|CBW16195.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911062|dbj|BAJ35036.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320084330|emb|CBY94123.1| survival protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321222338|gb|EFX47410.1| Survival protein SurA precursor Peptidyl-prolyl cis-trans isomerase
SurA [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322615913|gb|EFY12830.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322620698|gb|EFY17558.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322623951|gb|EFY20788.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322627399|gb|EFY24190.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322630706|gb|EFY27470.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322638074|gb|EFY34775.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322640560|gb|EFY37211.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322647700|gb|EFY44185.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322648050|gb|EFY44517.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322656918|gb|EFY53204.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657371|gb|EFY53643.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322663691|gb|EFY59891.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666524|gb|EFY62702.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672317|gb|EFY68429.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322676371|gb|EFY72442.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322679536|gb|EFY75581.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322686135|gb|EFY82119.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323128410|gb|ADX15840.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|323194979|gb|EFZ80165.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323200112|gb|EFZ85199.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323201067|gb|EFZ86136.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323209464|gb|EFZ94397.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323212284|gb|EFZ97108.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323216589|gb|EGA01315.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323222472|gb|EGA06842.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323225783|gb|EGA10003.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323228676|gb|EGA12805.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236710|gb|EGA20786.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239789|gb|EGA23836.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323242163|gb|EGA26192.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249412|gb|EGA33328.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323252253|gb|EGA36104.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323256656|gb|EGA40386.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323261310|gb|EGA44897.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265510|gb|EGA49006.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271702|gb|EGA55120.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326621788|gb|EGE28133.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|326626455|gb|EGE32798.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
gi|332987044|gb|AEF06027.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 428
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R ++ R D KL S G+ + +L F
Sbjct: 187 PTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++E + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + ++I+V E R +L + + N + ++++
Sbjct: 267 ILKVNDLRGQSQSISVTEVHARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ A + + + K + A ++++ R++A
Sbjct: 385 KVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|261245325|emb|CBG23113.1| survival protein SurA precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
Length = 428
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R ++ R D KL S G+ + +L F
Sbjct: 187 PTSEQVNDAQRQAESIVEEARNSADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++E + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNSADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + ++I+V E R +L + + N + ++++
Sbjct: 267 ILKVNDLRGQSQSISVTEVHARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ A + + + K + A ++++ R++A
Sbjct: 385 KVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|226942107|ref|YP_002797181.1| SurA [Laribacter hongkongensis HLHK9]
gi|226717034|gb|ACO76172.1| SurA [Laribacter hongkongensis HLHK9]
Length = 434
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 10/251 (3%)
Query: 40 SRIRTTINGEVITDGDISKRIAL----LKLQKIN----GELEKIAVQELIVETLKKQEIE 91
RI +N + IT + R+ L QK+ G L++ ++ +I E ++ Q
Sbjct: 34 DRIVAVVNKQAITQQALDTRVREAEAQLTRQKVPLPPAGVLQQQMLERMINEEVQLQYAG 93
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+GI DS ++ + A L+ E F + L GI + F+ L+ Q I + + +
Sbjct: 94 NNGIALDSAELDRIMDRLAEQNRLTPEQFRARLKADGINEAAFRADLSRQVILDRLRERE 153
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
K + E+ A + + E+ + +L ++P+ + +++ ++L
Sbjct: 154 VDSKVNVSDSEVDAVLRSAVSANRTEFRLSHILITLPEQASPQEVAKRQQRASDAAAKLA 213
Query: 212 LPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
++ S D S G + + L P F L++ +T + G+
Sbjct: 214 AGAPFAQVAASYSDAQDALSGGDLGWRSATRLPPVFVAALEQLKPGQSTQVLRSANGLHI 273
Query: 270 IAICDKRDLGG 280
+ + +R G
Sbjct: 274 LKLEARRSRGD 284
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 59/152 (38%), Gaps = 4/152 (2%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ A + + V + +R +L + N++ + Q RI + + +
Sbjct: 276 LEARRSRGDAQMVEQRQVRHIL--VRANEITSDKDAQTRILQIRDRIANGMPFAEAAKLY 333
Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-G 280
+ G ++ D+ P+F + L + P + G I + R G
Sbjct: 334 SEDGSAPKGGDLGWVNPGDMVPEFERAYLALPVGQLSQPVRSPFGWHLILVDGTRQQDIG 393
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +A + + K E+ AE++++LR++A
Sbjct: 394 DARQRAEIRQELRARKSEQVYAEWLQQLRASA 425
>gi|115375725|ref|ZP_01462979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|310825132|ref|YP_003957490.1| peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1]
gi|115367288|gb|EAU66269.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|309398204|gb|ADO75663.1| Peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1]
Length = 322
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/295 (19%), Positives = 113/295 (38%), Gaps = 19/295 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIA--LLKLQKINGELE---------KIAVQELIVETLKKQ 88
R+ +N ++IT ++++R A L +L K ++ LI E L +
Sbjct: 25 DRVAAVVNRDIITLSEVNQRAAPELSRLAGEKDPRRRADGRAQILKQSLDVLIAEKLIEA 84
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
EI + G+T + V+ + G+ + E F L ++G ++++L+ Q +
Sbjct: 85 EIRELGMTVSPSEVDEAMADVRKQNGVETPEQFEQLLQREGYTLKSYREFLSKQIARGRL 144
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQN--QGFVQKRIK 203
++ K E ++ A + + E R +L S+ Q +K
Sbjct: 145 MQMKVGPKVKVSEEDLKAAYAQYAKLEGGEAEVHARHILVSVDPKATQEQVDAAQKKAQA 204
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262
AEE+R + + G + + P F + + + P
Sbjct: 205 IAEEARRPGMDFASLARARSEGPSAEDGGDLGFFRRGVMVPAFEKTAFALKEGEVSEPIR 264
Query: 263 TQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T G + + ++R +G L+A L Q K EK+ +YV++LR + +
Sbjct: 265 TNFGWHVLKVEERRAVGVAPFEDLRAKLEQQLRQDKTEKYIDQYVQELRQKSSVE 319
>gi|23015619|ref|ZP_00055390.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magnetotacticum MS-1]
Length = 421
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 99/269 (36%), Gaps = 11/269 (4%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEK- 74
+ + +S+ S RI +N E+I+ D+ R+ L + + + +E
Sbjct: 5 AAIVLNALLFACVPLSWASAQDVDRIAAVVNDEIISIRDLDARLKLAITVSGLPDNIESR 64
Query: 75 -----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+++++ E ++ QE + ++ + V + + L K G+
Sbjct: 65 RRAVPQVLRKMVDERIQAQEAARLKVSAGTEDVARGLANVENQNRMPPGSLLTSLAKAGV 124
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIP 188
+ K + IW ++ E EI + + E+++ + +
Sbjct: 125 DPDAVKDQIRADIIWVKLIMRSLQPTIKVGEDEITERLETIRQQFGQPEFMLAEIFLPV- 183
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
D+ Q + + + E+ R P +F+ + G +L S L + ++
Sbjct: 184 DSPRQEEESKRLGERLIEQLRAGAP-FQALARQFSQSGSASNGGVLGWLSPSTLEDEVRD 242
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
++ ++ ++ T G +A+ DKR
Sbjct: 243 TVMSMNKGQVSSLIRTGSGYAILALIDKR 271
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 8/157 (5%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
I + I V F IP ++K + + C +LE
Sbjct: 268 IDKRVAGETFVGDPLLSIVQVFFPIPPGAPPISQLIEKAAELTAPLK-----SCPELEDM 322
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD--LG 279
K++ G+ + S + ++L+ N + P T + + +C + +
Sbjct: 323 GRKLNSEQSGRRDGVTLSVMPQNLRSLVTNLPINKASPPVSTGNALMVVMVCSRDENATK 382
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G + + + ++E Y++ LR A I +
Sbjct: 383 GGLPSRDAMRRMIEDERLELLSKRYLRDLRRAAFIDF 419
>gi|187922682|ref|YP_001894324.1| SurA domain [Burkholderia phytofirmans PsJN]
gi|187713876|gb|ACD15100.1| SurA domain [Burkholderia phytofirmans PsJN]
Length = 453
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 105/276 (38%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
F+ + + S I +N VIT ++ +R++L+ +
Sbjct: 21 SFLSVAPVQAQALGGSSGQTVDTIAAVVNNGVITRRELDERMSLITRRLNQQNAPVPPLD 80
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ I D TV + A LS + + S ++ QG+
Sbjct: 81 QLRQQVLNQMVLERIQLQKAKEDNINIDDATVQKTLERLAAANNLSLDVYRSRIEAQGVP 140
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
+ F + + + + K + E+ A+++ + ++ +
Sbjct: 141 WSTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHLQHIFLKA 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P N + ++ A + + + +KL K S+ D S G ++ S L P+
Sbjct: 201 PLNAPETDIEAAQQKAQALLAEAKGGANFDKLAKSNSQAPDASKGGDTGFVAPSKLPPEV 260
Query: 247 QNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGG 280
+ + NP T G E + + D+R G
Sbjct: 261 VKAVSTMRPGEVNPDLIRTNDGFEIVRLVDRRAGQG 296
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 69/180 (38%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + PD+++ + + L + + +R +L + ++
Sbjct: 267 MRPGEVNPDLIRTNDGFEIVRLVDRRAGQGTSSDAPKLVQTHVRHILLRV--GDGMSEPQ 324
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + ++ ++ G ++ + P+F+ + Q
Sbjct: 325 ARQKLLEIKKEIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNNLQDGQ 384
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + +R+ G ++ + L+ Q K E+ A+++++LR A +
Sbjct: 385 ISDPVRSEYGYHLIQVLGRRESEGSVSQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 444
>gi|260767121|ref|ZP_05876066.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio furnissii CIP
102972]
gi|260617876|gb|EEX43050.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio furnissii CIP
102972]
gi|315181264|gb|ADT88178.1| survival protein SurA [Vibrio furnissii NCTC 11218]
Length = 431
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 101/275 (36%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+KL + ++ + + R+ +N VI DI + +K
Sbjct: 1 MKLWKHTLLTLLGLMSIGLVQAQPVEMDRVAVIVNNGVILQSDIDTALLSVKANAKKNNR 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + V++LI++TL++QE E+ G+ D N +N A+ +AE +
Sbjct: 61 ALPDEAVLREQVVEKLIIDTLQQQEAERIGVRIDDNRLNEAINDIAKENHQTAEQLRVSV 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
+G+ F++ + + + + L E+ + T +Y I
Sbjct: 121 AAEGLTYPEFREQIRKEMSASEARNALVRRRINILPAEVNTLADLLAKETNATIQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ N Q++ V+ + K E + ++ + G ++ + ++
Sbjct: 181 IQLRF--NDGQDKSEVEAQAKKLVEQLNKGADFSTMAITYSKGPKALDGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ P+ + G + I D +
Sbjct: 239 PTIFADQIKMQNKGTIIGPFRSGVGFHILKIDDVK 273
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGTIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDDGAQKQLNEFVRRIQAGEATFGELAQQYSQDPGSAAQNGELGYQTPDLYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 354 QVETLPVGQISQPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFSRKFNEEASAWLQ 413
Query: 307 KLRSNAIIH 315
+LR+ A +
Sbjct: 414 ELRAGAFVE 422
>gi|206581089|ref|YP_002240483.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Klebsiella
pneumoniae 342]
gi|288937183|ref|YP_003441242.1| peptidylprolyl isomerase [Klebsiella variicola At-22]
gi|290512604|ref|ZP_06551970.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella sp. 1_1_55]
gi|206570147|gb|ACI11923.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Klebsiella
pneumoniae 342]
gi|288891892|gb|ADC60210.1| Peptidylprolyl isomerase [Klebsiella variicola At-22]
gi|289774945|gb|EFD82947.1| peptidyl-prolyl cis-trans isomerase SurA [Klebsiella sp. 1_1_55]
gi|294488615|gb|ADE88150.1| peptidyl-prolyl cis-trans isomerase [Pantoea agglomerans]
Length = 428
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ + ++ A+ ++ + S L +GI N
Sbjct: 67 RHQILERLIMDQIVLQLGQKMGVKVSDDQLDQAIANIAKQNNMTMDQMRSRLAYEGINYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + E+E A + +N E + +L + +N
Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLAEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
++ + +A + R + KL S G+ + +L F
Sbjct: 187 PTADEVAAAQEQANAIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+++ ++ E+ + IT V Q
Sbjct: 129 RSQIRKEMLISEVRNNEVRRR-ITVLPQEVEALAKQIGDQNDASTELNLSHILIPLAENP 187
Query: 116 SAEDFSSFLDKQG----------------IGDNHFKQYLAI-QSIWPDV----------- 147
+A++ ++ ++ I + +Q L Q W +
Sbjct: 188 TADEVAAAQEQANAIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + +NI+V E R +L + + N Q
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLK--PSPIMNDAQAQA 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+++ K K S+ + G + P F++ L++ ++ T
Sbjct: 306 KLEQIAADIKSGKTTFAKAAKAFSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQT 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + A ++++ R++A
Sbjct: 366 SGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|161504788|ref|YP_001571900.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866135|gb|ABX22758.1| hypothetical protein SARI_02912 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 428
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A KQ +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDANTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q +R ++ R D KL S G+ + +L F
Sbjct: 187 PTSGQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/337 (12%), Positives = 96/337 (28%), Gaps = 75/337 (22%)
Query: 48 GEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLKKQEIE 91
G ITD + + IA + Q +E+I+ ++ E+
Sbjct: 88 GVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVR 147
Query: 92 KSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSFLDKQ------- 127
+ IT V+ Q ++ + +
Sbjct: 148 RR-ITVLPQEVDALAKQIGTQNDANTELNLSHILIALPENPTSGQVNDAQRQAESIVEEA 206
Query: 128 ---------GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNL 159
I + +Q L Q W + + G
Sbjct: 207 RNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFH 266
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+++ + + NI+V E R +L + + + ++++
Sbjct: 267 ILKVNDLRGQSPNISVTEVHARHILLK--PSPIMTDQQARLKLEEIAADIKSGKTTFAAA 324
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ + G + P F++ L K + + P + G I + D R
Sbjct: 325 AKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQMSAPVHSSFGWHLIELLDTR 384
Query: 277 DLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ A + + + K + A ++++ R++A
Sbjct: 385 KVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|170691413|ref|ZP_02882578.1| SurA domain [Burkholderia graminis C4D1M]
gi|170143618|gb|EDT11781.1| SurA domain [Burkholderia graminis C4D1M]
Length = 453
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
F+ + ++ I +N VIT ++ +R++L+ +
Sbjct: 21 SFLSVAPVHAQALAGNRGQTVDTIAAVVNNGVITRRELEERVSLITRRLNQQNAPIPPAD 80
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ GI D V + A+ LS + + + ++ QG+
Sbjct: 81 QLRQQVLNQMVLERIQLQKAKEDGINIDDAAVQKTLERLAQANNLSLDVYRARIEAQGVP 140
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
F + + + + K + E+ A+++ + + +L
Sbjct: 141 WTTFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHLEHILLKA 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P N Q ++ +A + + + KL K S+ D S G Y S L P+F
Sbjct: 201 PLNAPQPDIEAAQKKAEALLAEAKGGANFEKLAKSNSQAPDASKGGDMGYAAPSKLPPEF 260
Query: 247 QNLLKKSQNNTTNPYV--TQKGVEYIAICDKRDLGG 280
+ NP V T G E + + D+R G
Sbjct: 261 VKAASALRPGQVNPEVIRTSDGFEVVRLVDRRAGQG 296
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 68/180 (37%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L + P+V++ + L + + +R +L + ++
Sbjct: 267 LRPGQVNPEVIRTSDGFEVVRLVDRRAGQGTSSDAPKLVQTHVRHILLRV--GDGMSEPQ 324
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + + ++ G ++ + P+F+ + Q
Sbjct: 325 ARQKLLEIRKEIAAGGDFSKFASTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDGQ 384
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + ++R+ G IA + L+ Q K E+ A+++++LR A +
Sbjct: 385 ISDPVRSEYGYHLIQVLERREAQGSIAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 444
>gi|166710727|ref|ZP_02241934.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 463
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 109/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I I P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ LI+ L+ + SGI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-TQQAATGSKYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRVGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALTQQAATGSKYHLAHILIGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ +E+ + V EY R +L + DN Q
Sbjct: 248 AQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRVGDN--Q 305
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLK 251
+ + +I R+ D K +S+ + G + P F ++
Sbjct: 306 TEAQAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 SLADGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + Y
Sbjct: 425 GEAYVSY 431
>gi|54307618|ref|YP_128638.1| putative survival protein SurA [Photobacterium profundum SS9]
gi|81697526|sp|Q6LV39|SURA_PHOPR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|46912041|emb|CAG18836.1| putative survival protein SurA [Photobacterium profundum SS9]
Length = 434
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 117/313 (37%), Gaps = 15/313 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + I + S + ++ T +N VI D++ + +++
Sbjct: 1 MKKWKSSLLGIAIWSLAASSMAAPKELDKVVTLVNDSVILQSDVNAMLQTVRINAAEQNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI+ETL+ Q+ E+ GI D ++ + A+ L+ L
Sbjct: 61 PLPDDALLTEQVMEKLIIETLQLQQAEQFGIRIDDTRLDQAVAEIAKERELTIPQLQKEL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDV--VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+K GI + F++ + + ++ + E+E+ A + + + ++ I
Sbjct: 121 EKSGISYSIFREQMRRDMTASEARTIQVRRRINILPQEVEMLAEQLNKQTLQTVQFNISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + + + Q ++ L+ D L ++ + G+ ++ + +
Sbjct: 181 IQLRVEEGATKEQREETQQQAQQIVDELKNGADFANLAYSYSKGPKALQGGEWGWMRQEE 240
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297
+ F + +K + P+ + G I + D + + ++ + +
Sbjct: 241 MPTIFADQIKSNGKGAIIGPFRSGVGYHIIKVNDVKGLETVSVTEVNARHILIKTSVILS 300
Query: 298 EKHEAEYVKKLRS 310
+ ++K R
Sbjct: 301 DDGAKRQLEKARQ 313
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ ++V E R +L + + + +++++ A + L + + S
Sbjct: 277 GLETVSVTEVNARHILIKT--SVILSDDGAKRQLEKARQDILAGRQTFADEAQKLSSDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + P+F++ ++ + P+ T G + + D+R++ + A+
Sbjct: 335 SAANGGELGWQTPDLYVPEFKDKIETLPKGTISEPFKTVHGWHIVEVLDRRNVDRTDAAM 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + ++++LR+ A I
Sbjct: 395 KNRAYRILFSRKFNEEAQAWLQELRAGAYIE 425
>gi|28199704|ref|NP_780018.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1]
gi|182682448|ref|YP_001830608.1| SurA domain-containing protein [Xylella fastidiosa M23]
gi|81724959|sp|Q87AJ0|SURA_XYLFT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|28057825|gb|AAO29667.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1]
gi|182632558|gb|ACB93334.1| SurA domain [Xylella fastidiosa M23]
gi|307578730|gb|ADN62699.1| SurA domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 463
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 45/324 (13%), Positives = 115/324 (35%), Gaps = 23/324 (7%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66
++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q
Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60
Query: 67 KINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+ E L++ ++ LI+ L+ + +GI + +N A N S +
Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L +GI F+Q + + + + + E E+ + + +Y
Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQANSGAQY 178
Query: 179 LIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQY 236
++ +L S+PD Q QK+I + + +++ + + G +
Sbjct: 179 HLQHILVSLPDGATSEQIAIAQKKINGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--------AY 287
++ F +++ P G + + + + RD + +
Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVRDSTAAAGPRQMATEYHARH 298
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311
+ + T + E + LR+
Sbjct: 299 ILVRITDKQKEAQAKAKIDTLRAR 322
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--I 231
EY R +L I D + + Q K D +R+ D + + +S+ + S
Sbjct: 290 MATEYHARHILVRITDKQKEAQA---KAKIDTLRARIAGGADFQTVARESSEDANNSNQG 346
Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLS 289
G + F N +K + N + P+ + G + R +A +
Sbjct: 347 GDLGWFPSDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQRLGTRQTDVTRENQRAQIR 406
Query: 290 AQNTPTKIEKHEAEYVKKLRSNA 312
K+E+ ++++LRS A
Sbjct: 407 DTIGQRKLEESYERFLRELRSEA 429
>gi|332305313|ref|YP_004433164.1| SurA domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172642|gb|AEE21896.1| SurA domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 431
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 108/314 (34%), Gaps = 17/314 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQ 66
+KL F L+ F + ++ + ++ V+ + I KR A+ Q
Sbjct: 1 MKLTVVTFALLAF--ISFSTFAKQTRLDNVAVIVDQGVVLESQIKELVSTVKRNAITNNQ 58
Query: 67 KINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ + L A++ LIV++L+ Q ++ GI ++ AR G + E L
Sbjct: 59 TLPSDRVLRTQAIERLIVDSLQSQMADRMGIQISDPQLDQTIDNIAREDGTTVEQLRQSL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRT 182
+G+ +++ + + I +V + + + EI + + EY +
Sbjct: 119 ASEGVSFEVYREQVRKELISGEVRRANVRRRIYITPQEISNLVKLIDEQGGQQAEYHLGH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESD 241
+L P K + L + K +S + G ++ +
Sbjct: 179 ILIGFPPEPTDADVSKAKDTAEKVLELLNNGSEFAKIATASSSGSKALEGGDLGWMNINS 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--- 297
+ F ++ S+++ P + G + I D R + + +
Sbjct: 239 MPTLFAEAVQGTSKDDLIGPIRSGAGFHVLKIIDIRGIEKVEVAELKSRHILIKPSVILS 298
Query: 298 EKHEAEYVKKLRSN 311
++ + + + R
Sbjct: 299 DEKAEKMLIEFRKQ 312
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 59/153 (38%), Gaps = 8/153 (5%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ + V E R +L I + + + +K + + + L D +L K S
Sbjct: 274 RGIEKVEVAELKSRHIL--IKPSVILSDEKAEKMLIEFRKQLLAGEADFAELAKEHSADP 331
Query: 228 DVSIG--KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
++ + + P F++ L+K + + P + G + + DKR +
Sbjct: 332 GSALRGGDLGWADPNVYVPAFRDTLQKLEVGEISQPVRSTHGWHLMQLMDKR-VQDATEK 390
Query: 285 KAYLSAQ--NTPTKIEKHEAEYVKKLRSNAIIH 315
+ A K + ++K++R +A +
Sbjct: 391 RKEDKAYQLLFQRKFAEETEAWLKEMRDSAYVE 423
>gi|108758581|ref|YP_628738.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622]
gi|108462461|gb|ABF87646.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622]
Length = 325
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 107/294 (36%), Gaps = 18/294 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIA--LLKLQ----KINGELE----KIAVQELIVETLKKQE 89
++ +N ++I ++ +R A + ++ + GE K A+ LI E L + E
Sbjct: 29 DKVAAVVNRDIIALSEVQQRAAPEMARVNDPDPRKRGEQRLQLMKTALDTLIGEKLMESE 88
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
I + GIT V+ + ++ F L +G+ ++ + + + ++
Sbjct: 89 IAQLGITASEAEVDELVADVRQQNNITDPAQFEQLLLGEGLTMATYRDMMRKRILRDRLL 148
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + E ++ A + + E R +L + Q K+ +A
Sbjct: 149 RMKVGPQVKITEEDLKAAYTQYTRMESGDSEVHARHILVQVDAKATAEQVEAAKKRAEAI 208
Query: 207 ESRLRLPK-DCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVT 263
+ R P D L + + G + + P F+ + + P T
Sbjct: 209 ATEARRPGMDFASLARARSEGPSAADGGDLGWFKRGVMVPAFEKAAFGLPEGGVSEPVRT 268
Query: 264 QKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G + + ++R + ++ L + K EK +YV++LR A +
Sbjct: 269 NFGWHVLKVEERRTVAAASYEEMRPKLEGKLLQEKTEKFLDQYVQELRQKANVD 322
>gi|325922420|ref|ZP_08184189.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC
19865]
gi|325547117|gb|EGD18202.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC
19865]
Length = 466
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/316 (12%), Positives = 110/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
+L ++I + P+ S + RI ++ +V+ ++ + + +K Q +
Sbjct: 6 SVLLASLLVITSTVSPMASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRDNQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ + +GI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVGRADSTGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYGDFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQATTGSQYHLAHILV 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGANAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKLVTEYNARHILVRIGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + LR+
Sbjct: 305 QTEAQAKAKIDTLRAR 320
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 91/304 (29%), Gaps = 61/304 (20%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN----------TGLSAED 119
G+ E+IV+ L++ + I+ V+ Q A GL
Sbjct: 132 GDFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQATTGSQYHLAHILVGLPEGA 190
Query: 120 FSSFLDKQGIGDNHFKQYL----------------------AIQSIWPDV--VKNDFMLK 155
+ + + K + W + + N F
Sbjct: 191 NAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIPNAFAQL 250
Query: 156 YGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+++ +E+ + V EY R +L I DN+ + Q
Sbjct: 251 IRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKLVTEYNARHILVRIGDNQTEAQA 310
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLLKKS 253
K D +R+ D K +S+ + G + P F + + +
Sbjct: 311 ---KAKIDTLRARITGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVEGLA 367
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P+ TQ G + R + +A + K+E+ Y+++LR A
Sbjct: 368 DGAVSEPFRTQAGWHIVQRVGSRQTDVSAESQRAQIRETIGRRKLEEEYNRYLQELRGEA 427
Query: 313 IIHY 316
+ +
Sbjct: 428 YVSF 431
>gi|15837440|ref|NP_298128.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c]
gi|81788857|sp|Q9PF40|SURA_XYLFA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|9105742|gb|AAF83648.1|AE003923_6 peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c]
Length = 464
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/325 (13%), Positives = 116/325 (35%), Gaps = 24/325 (7%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66
++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q
Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60
Query: 67 KINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+ E L++ ++ LI+ L+ + +GI + +N A N S +
Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L +GI F+Q + + + + + E E+ + + +Y
Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQASSGAQY 178
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFASKIHDVSIGKAQY 236
++ +L ++PD Q + ++ D +S + +++ + + G +
Sbjct: 179 HLQHILVAVPDGATSQQIAIAQKKIDGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ---- 291
++ F +++ P G + + + + RD A ++ +
Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVRDSAAAAAGPRQMATEYHAR 298
Query: 292 -----NTPTKIEKHEAEYVKKLRSN 311
T + E + LR+
Sbjct: 299 HILVRITEKQKEAEAKAKIDTLRAR 323
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 7/161 (4%)
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+E+ A EY R +L I + + + + K D +R+ D
Sbjct: 273 LKLVEVRDSAAAAAGPRQMATEYHARHILVRITEKQKEAEA---KAKIDTLRARIAGGAD 329
Query: 216 CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+ + +S+ + S G + F N +K + N + P+ + G +
Sbjct: 330 FQTVARESSEDANNSNQGGDLGWFPSDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQR 389
Query: 273 CDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
R +A + K+E+ ++++LRS A
Sbjct: 390 LGTRQTDVTRENQRAQIRDTIGQRKLEESYERFLRELRSEA 430
>gi|322834453|ref|YP_004214480.1| SurA domain protein [Rahnella sp. Y9602]
gi|321169654|gb|ADW75353.1| SurA domain protein [Rahnella sp. Y9602]
Length = 431
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 39/211 (18%), Positives = 79/211 (37%), Gaps = 4/211 (1%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L + LI++ ++ Q + GIT V+ A+ +S + S L G+
Sbjct: 64 ATLRHQILDRLIMDQIQLQMATRMGITPTDQDVDKAIAGIAQQNNISVDQLRSRLAYDGM 123
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSI 187
+ ++ + + I +V ++ + L E+ A + +N + E+ + +L +
Sbjct: 124 NYSTYRTQIRKEMIISEVRNSEVRRRVTILPQEVDQLAKQVAAQNGSGAEFNLSHILLPL 183
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF 246
P+N Q+Q +++ + L D KL S G + +L F
Sbjct: 184 PENPTQDQVDSAEQLAKKIVADLNNGADFGKLAITYSADSQALKGGNMGWGKLQELPSLF 243
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L +Q P + G + + D R
Sbjct: 244 AQALSTAQKGQVIGPIRSGVGFHILKVNDIR 274
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/317 (13%), Positives = 94/317 (29%), Gaps = 59/317 (18%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
I+ + R+A + +E+I+ ++ E+ + +T V+ Q A
Sbjct: 109 ISVDQLRSRLAYDGM--NYSTYRTQIRKEMIISEVRNSEVRRR-VTILPQEVDQLAKQVA 165
Query: 111 RNTGL-----------------------SAEDFSSF----------LDKQGIGDNHFKQY 137
G SAE + K I + Q
Sbjct: 166 AQNGSGAEFNLSHILLPLPENPTQDQVDSAEQLAKKIVADLNNGADFGKLAITYSADSQA 225
Query: 138 LAIQ-SIWPDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L W + V G +++ + K ++V E
Sbjct: 226 LKGGNMGWGKLQELPSLFAQALSTAQKGQVIGPIRSGVGFHILKVNDIRGDNKTVSVTEV 285
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL 237
R +L P + + K + A + + ++ ++ + + G +
Sbjct: 286 HARHILLK-PSVVMTDAQARAKLEQVAADIKSGKATFADEAKQLSQDPGSANQGGDLGWA 344
Query: 238 LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPT 295
P F++ L+ + + P + G I + D R + A + + +
Sbjct: 345 SPDMYDPAFRDALMNLKKGEISAPVHSSFGWHLIQLIDTRQVDKTDAAQKERAYRMLFNR 404
Query: 296 KIEKHEAEYVKKLRSNA 312
K + ++++ R+ A
Sbjct: 405 KFAEEAQTWMQEQRAEA 421
>gi|109899724|ref|YP_662979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas
atlantica T6c]
gi|122070658|sp|Q15QB3|SURA_PSEA6 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|109702005|gb|ABG41925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas
atlantica T6c]
Length = 431
Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 108/313 (34%), Gaps = 17/313 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQ 66
+KL F L+ F + ++ + ++ V+ + I KR AL Q
Sbjct: 1 MKLTVVTFALLAF--ISFNTFAKQVRLDNVAVIVDQGVVLESQIEELVNTVKRNALTNNQ 58
Query: 67 KINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ + L A++ LIV++L+ Q E+ GI ++ AR G + ED L
Sbjct: 59 TLPSDRVLRTQAIERLIVDSLQNQMAERMGIQISDPQLDQTIDNIAREDGTTVEDLRKNL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRT 182
+G+ +++ + + + +V + + + EI + EY +
Sbjct: 119 ASEGVSFEVYREQVRKELVTGEVRRANVRRRIYITPQEISNLVTLIDEQGGQQAEYHLGH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESD 241
+L P K + L + K +S + G ++ +
Sbjct: 179 ILIGFPPEPTDEDVSKAKDTAEKVLELLNNGSEFAKIATASSSGSKALEGGDLGWMNINS 238
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--- 297
+ F ++ S+++ P + G + I D R + + +
Sbjct: 239 MPTLFAEAVQGTSKDDLIGPIRSGAGFHVLKIIDFRGIEKVEVAELKSRHILIKPSVILS 298
Query: 298 EKHEAEYVKKLRS 310
++ + + + R
Sbjct: 299 DEKAEKMLTEFRK 311
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 58/153 (37%), Gaps = 8/153 (5%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ + V E R +L I + + + +K + + + L D +L K S
Sbjct: 274 RGIEKVEVAELKSRHIL--IKPSVILSDEKAEKMLTEFRKELLAGEADFAELAKEHSADP 331
Query: 228 DVSIG--KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
++ + + P F++ L+ + + P + G + + DKR +
Sbjct: 332 GSALRGGDLGWADPNVYVPAFRDTLQSLEVGEISQPVRSTHGWHLMQLMDKR-VQDATEK 390
Query: 285 KAYLSAQ--NTPTKIEKHEAEYVKKLRSNAIIH 315
+ A K + ++K++R +A +
Sbjct: 391 RKEDKAYQLLFQRKFAEETEAWLKEMRDSAYVE 423
>gi|90411942|ref|ZP_01219950.1| putative survival protein SurA [Photobacterium profundum 3TCK]
gi|90327200|gb|EAS43572.1| putative survival protein SurA [Photobacterium profundum 3TCK]
Length = 434
Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 42/313 (13%), Positives = 116/313 (37%), Gaps = 15/313 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + I + S + ++ T +N VI D++ + +++
Sbjct: 1 MKKWKISLLGIAIWSLAASSMAAPKELDKVVTLVNDSVILQSDVNAMLQTVRINAAEQNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI+ETL+ Q+ E+ GI D ++ + A+ L+ L
Sbjct: 61 PLPDNALLTEQVMEKLIIETLQLQQAEQFGIRIDDTRLDQAVAEIAKERELTIPQLQQEL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDV--VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+K GI + F++ + + ++ + E+++ A + + + ++ I
Sbjct: 121 EKSGISYSIFREQMRRDMTASEARTIQVRRRINILPQEVDMLAEQLNKQTLQTVQFNISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + + + Q ++ L+ D L ++ + G+ ++ + +
Sbjct: 181 IQLRVEEGATKVQREETQQQAQQLVDELKNGADFANLAYSYSKGPKALQGGEWGWMRQEE 240
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297
+ F + +K + P+ + G I + D + + ++ + +
Sbjct: 241 MPTIFADQIKSNGKGAIIGPFRSGVGYHIIKVNDVKGLETVSVTEVNARHILIKTSVILS 300
Query: 298 EKHEAEYVKKLRS 310
+ ++K R
Sbjct: 301 DDGAKRQLEKARQ 313
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ ++V E R +L + + + +++++ A + L + + S
Sbjct: 277 GLETVSVTEVNARHILIKT--SVILSDDGAKRQLEKARQDILAGRQTFADEAQKLSSDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + P+F++ ++ + P+ T G + + ++R++ + A+
Sbjct: 335 SAANGGELGWQTPDLYVPEFKDKVETLPKGTISEPFKTVHGWHIVEVLERRNVDRTDAAV 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + ++++LR+ A I
Sbjct: 395 KNRAYRILFSRKFNEEAQAWLQELRAGAYIE 425
>gi|330881719|gb|EGH15868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 256
Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 94/259 (36%), Gaps = 16/259 (6%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V T LSD ++ L +L+ + + + + ++ +VI + +R+ ++
Sbjct: 3 VKTKLSDCLRPLMLGALLLSGAV-----HAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQ 57
Query: 65 LQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
L+ + LI+E L+ Q E+SGI + +N A+ +S
Sbjct: 58 QTIAKRGSGVPPAEALQPQVLDRLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMS 117
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
E F + L G+ N ++ + + I V + + + E+ + K
Sbjct: 118 VEQFRAALAHDGLSYNDAREQVRREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQL 177
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGK 233
++ + +L + PD+ + +L+ D +L S + G
Sbjct: 178 SEKFHLANILIATPDSASSDAIQAAAVKAKGIYDQLKKGADFTRLAATTSSSENALEGGD 237
Query: 234 AQYLLESDLHPQFQNLLKK 252
+ + L P F +L
Sbjct: 238 MGWRKAAQLPPPFGEMLSA 256
>gi|58583369|ref|YP_202385.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188575375|ref|YP_001912304.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|75508083|sp|Q5GWC1|SURA_XANOR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|58427963|gb|AAW77000.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188519827|gb|ACD57772.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 463
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 108/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I I P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ LI+ L+ + SGI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-TQQAATGSKYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDA-EESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D + + D +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMKPGQVAGPLRGPSGFQLLKLMEMRDANAGGEKKMVTEYNARHILVRVGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 91/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALTQQAATGSKYHLAHILIGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ ME+ + V EY R +L + DN Q
Sbjct: 248 AQLIRDMKPGQVAGPLRGPSGFQLLKLMEMRDANAGGEKKMVTEYNARHILVRVGDN--Q 305
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLL 250
+ + +I R+ D K +S+ + G + P F + +
Sbjct: 306 TEAQAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 GLADGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + Y
Sbjct: 425 GEAYVSY 431
>gi|253988050|ref|YP_003039406.1| peptidyl-prolyl cis-trans isomerase SurA [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253779500|emb|CAQ82661.1| chaperone SurA precursor (peptidyl-prolyl cis-trans isomerase)
[Photorhabdus asymbiotica]
Length = 433
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 109/283 (38%), Gaps = 14/283 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQ 66
+K T + ++F + ++ + +I +N V+ + DI+ KR A Q
Sbjct: 1 MKNWRTLILGLMFSVST--AFAAPQQMDKIAAVVNNGVVLESDINSLLQSVKRDAQHAGQ 58
Query: 67 KINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+I E L ++ LI++ + Q ++ GIT T++ A ++ + +
Sbjct: 59 QIPDEHTLRHQILERLIMDNILLQMAKQMGITIPDQTLDSTIANIAAQNHITRDQMKHRI 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
G+ + ++ + + + +V N+ + L EI A + +N E I
Sbjct: 119 VADGMSFDTYRNQIRKEMLIAEVRNNEVRRRVTILPQEIDTLAKQISNQNANDSELNISH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+L +P+N Q Q + S L+ D KL +++ + G + +
Sbjct: 179 ILIPLPENPDQTQMEKATAVVHKIMSELKNGVDFGKLAIAYSADPQALKGGNMGWSKLQE 238
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ +Q P + G + + D R IA
Sbjct: 239 LPTLFAAQLQSAQKGAIVGPIRSGVGFHILKVNDIRGGNATIA 281
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 53/150 (35%), Gaps = 6/150 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ I V E R +L I + + + +++ D K S+
Sbjct: 274 RGGNATIAVTEVHARHILLRI--SPVMTDEQARAKLQQIAGDIRSGKTDFADAAKEFSED 331
Query: 227 HDVSIG--KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEI 282
++ + P F++ L++ ++ + P + G I + D R + ++
Sbjct: 332 PGSALRGGDLGWSTPDIFDPAFRDALMRLNKGEISQPIHSSFGWHLIQLLDTRKVDKTDV 391
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
A K K + ++++ R++A
Sbjct: 392 AQKDRAYRMLFNRKFTEEAQSWMQEQRASA 421
>gi|194364448|ref|YP_002027058.1| SurA domain [Stenotrophomonas maltophilia R551-3]
gi|194347252|gb|ACF50375.1| SurA domain [Stenotrophomonas maltophilia R551-3]
Length = 447
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 48/319 (15%), Positives = 111/319 (34%), Gaps = 19/319 (5%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
F LL + + V + RI ++ +VI ++ + IA +K Q +
Sbjct: 4 RFPVLLASLLAVSSVSAPLQVLAQEAQPLDRIAAVVDEDVILQSELQRAIANIKAQYVGR 63
Query: 71 E--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
E L + ++ L++ L+ + SGI +N A+ G + +
Sbjct: 64 ENQLPPEDVLSRQVLERLVLVKLQVARAQGSGIRVGDQELNQAMNAIAQQNGSTLDALRQ 123
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
L GI N F+ + + + ++ + E E+ A K + +Y +
Sbjct: 124 RLAHDGIDFNDFRASVRDEITVQRLRQSFAQSRISVSEGEVDAAL-KQQATVGNQYHLAH 182
Query: 183 VLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLES 240
+L ++PD +Q ++ D + + D N +++ + + G +
Sbjct: 183 ILIAVPDGANADQIATGQKKADGVKALLDKGELDFNAAAVRYSDSPNALEGGDLGWRSLD 242
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQN 292
++ F +++K P G + + + + RD ++ +
Sbjct: 243 EIPQAFAQMMEKMKAGEVVGPIRGPSGFQLLKLVEVRDASAAAGANTVTEYHGRHILVRV 302
Query: 293 TPTKIEKHEAEYVKKLRSN 311
+ + + LR+
Sbjct: 303 DDHQTDAAAKAKIDTLRAR 321
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 7/160 (4%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+E+ TV EY R +L + D++ K D +R+ D +
Sbjct: 276 VEVRDASAAAGANTVTEYHGRHILVRVDDHQT---DAAAKAKIDTLRARIAGGADFQTVA 332
Query: 221 KFASKIHD--VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
K +S+ + G + P F Q + + P+ T G + R
Sbjct: 333 KESSEDSNSKGQGGDLGWFPADAFGPAFGQQVAGIQDGGVSQPFRTDAGWHILQRVATRQ 392
Query: 278 LGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+A + K+E ++++LR A + +
Sbjct: 393 TDVTNDNQRAQVRETIGRRKLEDEYNRFLQELRGEAYVSF 432
>gi|30248886|ref|NP_840956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
europaea ATCC 19718]
gi|81722212|sp|Q82W17|SURA_NITEU RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|30138503|emb|CAD84793.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
europaea ATCC 19718]
Length = 448
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 125/314 (39%), Gaps = 22/314 (7%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS----------RIRTTINGEVITDGDISK 58
S +L + LI +++ +A SS RI +N EVIT +I++
Sbjct: 4 FSSDRQLKFRKYWLIYAVFATMLAADVFAQSSYSREDIKPIDRIVAVVNEEVITQQEINE 63
Query: 59 RIA--LLKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+ + +LQ+ N + LEK ++ LI++ ++ Q ++ G+T N ++ +
Sbjct: 64 VLQNTVQQLQRQNTQLPRMEILEKQLLERLILKRIQLQRAKEIGLTVSDNDLDQTLRRII 123
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
++ L+ ++F L ++G N F++ + + + + + + + E EI Q
Sbjct: 124 QDNHLTMDEFRQVLLQEGTDMNRFREEIRGEILMSRLKEQEVNSRVNVTENEIDNFLQNQ 183
Query: 171 KN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
N EY I +L I + + Q + + + LR D ++ S D
Sbjct: 184 ANSPAGNEEYRIAHILVQISEQMDEAQIEARHKRAETAYESLRQGADFVRVSAEFSDAPD 243
Query: 229 V-SIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
G+ + L P + L+ T + G + + ++R ++ +
Sbjct: 244 AMQGGELGWRPLGQLGSPFTEMLVNMQPGEVTPVVRSPVGFHILKLLERRQQEQKVTIIE 303
Query: 287 YLSAQNTPTKIEKH 300
AQ+ K+ +
Sbjct: 304 QTHAQHILIKVSEL 317
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/316 (12%), Positives = 97/316 (30%), Gaps = 64/316 (20%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R LL+ + E+++ LK+QE+ S + N ++ F A + + E
Sbjct: 134 RQVLLQEGTDMNRFREEIRGEILMSRLKEQEV-NSRVNVTENEIDNFLQNQANSPAGNEE 192
Query: 119 --------DFSSFLDKQGIGDNHFK------------QYLAI--------------QSIW 144
S +D+ I H + ++ + + W
Sbjct: 193 YRIAHILVQISEQMDEAQIEARHKRAETAYESLRQGADFVRVSAEFSDAPDAMQGGELGW 252
Query: 145 PDVVK-----NDFMLKYGNLEME--------------IPANKQKMKNITVREYLIRTVLF 185
+ + + ++ E+ + +Q+ K + + + +L
Sbjct: 253 RPLGQLGSPFTEMLVNMQPGEVTPVVRSPVGFHILKLLERRQQEQKVTIIEQTHAQHILI 312
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDL 242
+ + + + + R+ + + + + G ++ D
Sbjct: 313 KVSELVSEEDAH-----QLINQLMERIHNGADFMDVAKAHSEDASASAGGDLGWVSPGDT 367
Query: 243 HPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKH 300
P+F+ + + P T G I + ++R E + K +
Sbjct: 368 VPEFEQAMNALLPGQVSPPVRTPFGWHLIKVIERRSQDVSERQQREAARHTIHARKADAI 427
Query: 301 EAEYVKKLRSNAIIHY 316
E++++LR A + Y
Sbjct: 428 VQEWLQQLRDQAYVEY 443
>gi|317493318|ref|ZP_07951740.1| SurA domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918711|gb|EFV40048.1| SurA domain-containing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 432
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 102/283 (36%), Gaps = 14/283 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+K T + + FC + NG V+ + D+ + +KL
Sbjct: 1 MKNWRTLILGVAFCANTAFAAPQVVDKVAAVVD-NG-VVLESDVDGLMQSVKLNAREAGQ 58
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ L ++ LI++ ++ Q +K GI + V+ A+ +S + S L
Sbjct: 59 QLPDDATLRHQILERLIMDNIQLQMAKKMGIDINDADVDRAIGNIAQQNHMSLDQMRSRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRT 182
GI ++ + + + +V N+ + E+E A + +N E +
Sbjct: 119 AADGINYKTYRDQIRKEMLISEVRNNEVRRRVTILPQEVEALAKQVGAQNGADTELNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
+L ++P+N Q Q ++ +L D K+ S G+ + +
Sbjct: 179 ILIALPENPSQQQVDDAEQQARQLVDQLNKGADFGKMAVSYSADSQALKGGQMGWGKIQE 238
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
L F L+ + + P + G + + D R G ++
Sbjct: 239 LPSLFAAALQTAKKGDIIGPIRSGVGFHILKVNDLRGGQGNVS 281
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 73/243 (30%), Gaps = 33/243 (13%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSF--LDKQGIGDNHFKQYLAI-QSIWPDVVK--- 149
V+ + + + K + + Q L Q W + +
Sbjct: 186 NPSQQQVDDA----EQQARQLVDQLNKGADFGKMAVSYSADSQALKGGQMGWGKIQELPS 241
Query: 150 ---------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
G +++ + N++V E R +L + +
Sbjct: 242 LFAAALQTAKKGDIIGPIRSGVGFHILKVNDLRGGQGNVSVTEVHARHILLR--PSPVMT 299
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLK 251
+ ++++ + ++ + S+ + G + + + P F++ L+K
Sbjct: 300 DDQARAKLQEIAQQIKSKQITFDEAARAVSQDPGSALKGGDLGWAVPTMYDPAFRDALMK 359
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P + G I + D R + + K + ++++ R
Sbjct: 360 LQKGELSAPVHSSFGWHLIQLLDTRQVDRTDDAQKDRAYRM-LFNRKFAEEAQTWMQEER 418
Query: 310 SNA 312
++A
Sbjct: 419 ASA 421
>gi|289670942|ref|ZP_06492017.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 463
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 42/316 (13%), Positives = 107/316 (33%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I + P S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTVSPFASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ + SGI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQAATGSQYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDA-EESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D + + D +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRVGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQAATGSQYHLAHILIGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFPAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ +E+ + V EY R +L + DN Q
Sbjct: 248 AQLIRDMKPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRVGDN--Q 305
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLL 250
+ + +I R+ D K +S+ + G + P F + +
Sbjct: 306 TEAQAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 GLADGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + Y
Sbjct: 425 GEAYVSY 431
>gi|89075561|ref|ZP_01161966.1| putative survival protein SurA [Photobacterium sp. SKA34]
gi|89048701|gb|EAR54273.1| putative survival protein SurA [Photobacterium sp. SKA34]
Length = 433
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 120/314 (38%), Gaps = 15/314 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+K + ++ + S + ++ T+N VI D++ + + L
Sbjct: 1 MKTWKYSVLSLMMMGMSATSMAAPQELDQVVMTVNDGVILQSDVNAMLKTVHLNAAEEHQ 60
Query: 69 ----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
N L + + +LI+E L+ Q+ ++ GI D + ++ A+ +S + L
Sbjct: 61 QLPPNNILRQQVMDKLILENLQLQQAQQLGIRIDDSQLDKAIADVAKQRNMSVDQLRQSL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
GI F++ + + + + E+E A + + +Y I
Sbjct: 121 ANAGISYAMFREQMRNDMLASEARNIIVRKRVNVLPQEVESLAKQMAKQTQQNVQYNISQ 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+ + ++ + K+ + ++L+ + ++L +++ + G+ ++ +++
Sbjct: 181 IQIRVDEDADKAARDKAKQEAEDIVAQLKKGANFSQLAYRYSKGPKALKGGEWGWMGKAE 240
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297
+ F + ++ +N P+ + G + I D + + ++ + +
Sbjct: 241 MPTVFADQIQNNGKNAIIGPFRSGVGFHILKINDVKGMPSVSVVEVKARHILIKPSMILS 300
Query: 298 EKHEAEYVKKLRSN 311
+ ++K+R +
Sbjct: 301 DAAAKAELEKIRQS 314
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
M +++V E R +L I + + + + ++ +S + + + K S+
Sbjct: 277 GMPSVSVVEVKARHIL--IKPSMILSDAAAKAELEKIRQSIISGKQTFSAAAKAYSEDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
V+ G+ + + + P F++ ++ + + P+ + G + + +R + + A+
Sbjct: 335 SAVNGGQLGWQVPNMYAPAFKDKVETLPVDKISEPFKSSFGWHIVEVEGRRKVDRTDAAM 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K + K + ++++LR+ A I
Sbjct: 395 KNRAAQIIFNRKFNEEAQTWLQELRAGAYIE 425
>gi|284008562|emb|CBA75119.1| chaperone SurA protein (peptidyl-prolyl cis-trans isomerase)
[Arsenophonus nasoniae]
Length = 433
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 103/292 (35%), Gaps = 16/292 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------- 70
++ + V + + ++ +N V+ D+ + ++++ N
Sbjct: 6 KLIIGLLFTVSTTTLAAPQQLDKVTAIVNDGVVLQSDVDGMLDIVRINARNAGQQIPDEN 65
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ LI++ + Q EK I ++ A GL+ L GI
Sbjct: 66 ALRHQILERLIIDKIIMQIAEKMQIQIPDQAIDATIANIAAQNGLTIGQLQQRLSMDGIN 125
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIP 188
+++ + + + +V N+ + L E+ + ++ + ++ + +L +P
Sbjct: 126 LQNYRSDVRREMMIAEVRNNEVRRRITILPQEVDSLAAQLNSQAGQDANVNLSHILIPLP 185
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQ 247
+N Q + + ++L+ D KL S + G+ + +L F
Sbjct: 186 ENPTNTQSQLAMDTVNKIIAQLKQGADFGKLAITYSADPNALKGGQMGWSKVEELPTVFA 245
Query: 248 NLLK-KSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTP 294
++ + + P + G + + D + + ++ + +P
Sbjct: 246 QQIQHAKKGDIIGPIRSSVGFHILKLNDIQRGNMPISVTEVKARHILIKLSP 297
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/340 (14%), Positives = 114/340 (33%), Gaps = 65/340 (19%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIAVQELIVETLKKQ 88
+ A+ + I +T G + +R+++ + LQ ++ + +I E ++
Sbjct: 90 IQIPDQAIDATIANIAAQNGLTIGQLQQRLSMDGINLQNYRSDVR---REMMIAE-VRNN 145
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFL---------DKQGIGDNHFKQYL 138
E+ + IT V+ Q G A + S L + + + + +
Sbjct: 146 EVRRR-ITILPQEVDSLAAQLNSQAGQDANVNLSHILIPLPENPTNTQSQLAMDTVNKII 204
Query: 139 A------------------------IQSIWPDV------------------VKNDFMLKY 156
A Q W V +
Sbjct: 205 AQLKQGADFGKLAITYSADPNALKGGQMGWSKVEELPTVFAQQIQHAKKGDIIGPIRSSV 264
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
G +++ ++ I+V E R +L + + + N +I+ +
Sbjct: 265 GFHILKLNDIQRGNMPISVTEVKARHILIKL--SPIMNNEQAHAKIQQIAQQIKTGQITF 322
Query: 217 NKLEKFASKIHDVSIG--KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAIC 273
+ K S+ ++ + + + + P F++ L++ S+ T+ P + G I +
Sbjct: 323 AEAAKKYSQDPGSALRGGELGWNMPNIYDPAFRDGLMRLSKGETSQPIHSSFGWHLIQLE 382
Query: 274 DKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
D R + ++A K + K + ++++LR++A
Sbjct: 383 DTRQVDKTDVAQKDHAYRLLFNRKFNEEAQIWMQELRASA 422
>gi|90416848|ref|ZP_01224777.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma
proteobacterium HTCC2207]
gi|90331195|gb|EAS46439.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma
proteobacterium HTCC2207]
Length = 434
Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 113/317 (35%), Gaps = 17/317 (5%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
D K T + ++ + + + ++ ++ +V+ + ++ +R+A + Q
Sbjct: 2 DLKKTCNTALLAVLLGAFSVTASAQIEILDKVVAIVDEDVVLESEVQRRLATIYAQIQQS 61
Query: 71 ELE--------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ + ++ LI E L+ +GI +N + A++ L+ E ++
Sbjct: 62 GTQPPPQEIIVQQVLERLISERLQLNMGYSAGIRITDAELNDAMARIAKSNQLTMEQYAE 121
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLI 180
+ G ++ ++ + + I V + M + E+ + +T + +
Sbjct: 122 QIHATGSTLSNVREEIRNEMILMRVQQGQVMRRIRISNQELDNFLNSEEGRFMTSPDVNV 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLE 239
+L +P K ++ + + D +L S G +
Sbjct: 182 GHILLPVPSGKNTDEVNAILQRAQGILDQANSGTDFRQLAIANSADQTALQGGDLGWRKM 241
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ L F ++K + + + P + G I + +++ GGE ++ + + +
Sbjct: 242 AQLPGVFIEAVEKLEIDQVSEPIRSDAGYHLIKLYERK-GGGEQLIEQHFARHILIKPNQ 300
Query: 299 KHEA----EYVKKLRSN 311
+ + +LR
Sbjct: 301 IRDEATVVSQLTELRER 317
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 107/301 (35%), Gaps = 59/301 (19%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE----------- 118
+ + E+I+ +++ ++ + I + ++ F S +
Sbjct: 131 SNVREEIRNEMILMRVQQGQVMRR-IRISNQELDNFLNSEEGRFMTSPDVNVGHILLPVP 189
Query: 119 ------DFSSFLDK-QGIGDNH-----FKQYLAI-----------QSIWPDVVK--NDFM 153
+ ++ L + QGI D F+Q W + + F+
Sbjct: 190 SGKNTDEVNAILQRAQGILDQANSGTDFRQLAIANSADQTALQGGDLGWRKMAQLPGVFI 249
Query: 154 LKYGNLEMEIPAN---------------KQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
LE++ + ++ + ++ R +L I N+++++ V
Sbjct: 250 EAVEKLEIDQVSEPIRSDAGYHLIKLYERKGGGEQLIEQHFARHIL--IKPNQIRDEATV 307
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-N 255
++ + E R++ +D L K S+ + G+ + P+F+ + + N
Sbjct: 308 VSQLTELRE-RIKAGEDFALLTKEFSEDPGSALNGGELGWSTPGMFVPEFEQTMGSIELN 366
Query: 256 NTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ P+++Q G + + ++R+ E + K E+ +++++R A +
Sbjct: 367 EVSAPFLSQFGWHILQVTERRNQDFSENITRNRAQNLLRQRKYEEELQVWLQEIRDEAFV 426
Query: 315 H 315
Sbjct: 427 E 427
>gi|320354702|ref|YP_004196041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus
propionicus DSM 2032]
gi|320123204|gb|ADW18750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus
propionicus DSM 2032]
Length = 327
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 53/320 (16%), Positives = 110/320 (34%), Gaps = 27/320 (8%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKIN-------- 69
F L+ C+V + + + + R +N + IT ++++ R K+ +
Sbjct: 7 FFLVSICLVFVSAASNANVVDRSVAIVNNDTITLSEVNELGRSFFKKVTEETPADRLPEA 66
Query: 70 -GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ + +LI + L QE +K GI V+ + N + E F L G
Sbjct: 67 LQQARNTVIDKLIDKKLLVQEAKKLGIQVSDQEVDNALQRVLANNKATMEQFHKELLAMG 126
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTV--- 183
+ + +K+ L Q + ++ ++ K E +I Q + + E ++ +
Sbjct: 127 MTEKQYKEELRDQILSSKLINHEVRTKVVIPEEKILEYYQSNYTRQVGGGELHLQQIGCT 186
Query: 184 --LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLES 240
+K K E + + D N+L K S + G
Sbjct: 187 WGEPLANGVVPSQDDAKEKIRKAYE--KAKDGDDFNELAKKYSDLPSAEDGGDLGTFQLH 244
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR-----DLGGEIALKAYLSAQNTP 294
+L P Q + + + + G + + + A+K + +
Sbjct: 245 ELAPAMQQAVAQLKSGEISPVVQIDNGYHFFKLVSSQGGATVSKADYEAVKEEIRERLYK 304
Query: 295 TKIEKHEAEYVKKLRSNAII 314
+E ++VK +R A I
Sbjct: 305 QAMEARFKDWVKSIRDKAYI 324
>gi|323524758|ref|YP_004226911.1| SurA domain-containing protein [Burkholderia sp. CCGE1001]
gi|323381760|gb|ADX53851.1| SurA domain protein [Burkholderia sp. CCGE1001]
Length = 468
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 14/276 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
FV + ++ I +N VIT ++ +R+ L+ +
Sbjct: 36 SFVSVAPVQAQALAGNRGQTVDTIAAVVNNGVITRRELDERVNLITRRLNQQNAPIPPAD 95
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + ++++E ++ Q+ ++ GI D V + A+ LS + + + ++ QG+
Sbjct: 96 QLRQQVLNQMVLERIQLQKAKEDGINVDDAAVQKTLERLAQANNLSLDVYRARIEAQGVP 155
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
F + + + + K + E+ A+++ + + +
Sbjct: 156 WATFTSDARTELTLSRLREKEVDSKVTVSDAEVANYIASQRGPNAGATSDLHMEHIFLKA 215
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF 246
P N Q ++ +A + + + KL K S+ D + G Y S L P+F
Sbjct: 216 PLNAPQTDIEAAQKKAEALLAEAKGGANFGKLAKSNSQAPDAAKGGDMGYAAPSKLPPEF 275
Query: 247 QNLLKKSQNNTTNPYV--TQKGVEYIAICDKRDLGG 280
+ NP V T G E + + D+R G
Sbjct: 276 VKAASALRPGEVNPEVIRTNDGFEVVRLVDRRAGQG 311
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 70/180 (38%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L + P+V++ + + L + + +R +L + ++
Sbjct: 282 LRPGEVNPEVIRTNDGFEVVRLVDRRAGQGTSSDAPKLVQTHVRHILLRV--GDGMSEPQ 339
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ + ++ ++ G ++ + P+F+ + Q
Sbjct: 340 ARQKLLEIKKEIQAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNTLQDGQ 399
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + ++R+ G IA + L+ Q K E+ A+++++LR A +
Sbjct: 400 ISDPVRSEYGYHLIQVLERREAQGSIAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 459
>gi|120613390|ref|YP_973068.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
gi|120591854|gb|ABM35294.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
Length = 476
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 15/262 (5%)
Query: 38 MSSRIRTTINGEVITDGDISKRIA--LLKLQKINGEL------EKIAVQELIVETLKKQE 89
+ I +N E IT+ ++ R+A +L GE + ++ LI E ++ Q
Sbjct: 68 QADYIVAVVNTEPITNNEVQARVARVEHQLAAQGGERPPRRVIAREVLERLINEKIQVQM 127
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+SGI D V+ AR +S + L GI F+ L Q + + +
Sbjct: 128 ATESGIKVDDYAVSQAEQSVARQNSVSIPEMHRRLAADGISPERFRSELRNQLLIQRLRE 187
Query: 150 NDFMLKYGNLEMEIPANKQKMK-----NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
D + ++++ + + + + E + +L S+P+N +++
Sbjct: 188 RDVESRVRVSDLDVDQYMRDQQQSAMSDPSKIELNLGHILVSVPENASPEVVEQRRQRAQ 247
Query: 205 AEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYV 262
R+R +D K+ + S + + G+ F +++ P
Sbjct: 248 QAADRVRAGEDFAKVARDLSDAPEAPTGGELGLRPADRYPDLFLRTVQQVPVGGIAGPVR 307
Query: 263 TQKGVEYIAICDKRDLGGEIAL 284
+ G + + ++ G
Sbjct: 308 SPAGFHVLRVIERSRAGIPATA 329
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 5/154 (3%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ T + +R +L + +R+ + L D L + S+
Sbjct: 320 RSRAGIPATALQNHVRHILLRT--GPQLTEAAAAERLAEYRRRILSGQADFATLAREHSQ 377
Query: 226 IHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEI 282
G + P+F+ + + + P V++ GV I + ++R+ +
Sbjct: 378 DGSAKQGGDLGWAGPGRYVPEFEEAVDALKPDEISQPVVSRFGVHLIQLLERREAKLTQR 437
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + K+E+ + ++ R+ A + Y
Sbjct: 438 EQRDMVRDAVREKKLEEAFTNWAQEARARAYVEY 471
>gi|78067506|ref|YP_370275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
gi|122070639|sp|Q39D35|SURA_BURS3 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|77968251|gb|ABB09631.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
Length = 452
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 111/298 (37%), Gaps = 22/298 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R L+ +LQ+ N L + ++++E +
Sbjct: 34 QGAQLADEVVAVVNNDVITGRELDQRAGLIARRLQQQNAPVPPTDQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ E + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRGRLEAQGVPWSVFTSDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q ++
Sbjct: 154 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
DA + + D KL K S+ +D G + S L + K
Sbjct: 214 ADALLQQAKSGADFEKLAKNNSEANDAKKGGDLGFKAPSALPADVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLR 309
G E + + D+R G A ++ + K E + + +R
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGKSEGQARQQLADIR 331
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 69/183 (37%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
G ++++ D ++ G ++ + P+F+ + Q
Sbjct: 321 GQARQQLADIRNQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQD 380
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + +R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 381 GQISQPIRTEYGYHLIQVLSRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 440
Query: 314 IHY 316
+ Y
Sbjct: 441 VQY 443
>gi|332703852|ref|ZP_08423940.1| SurA domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554001|gb|EGJ51045.1| SurA domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 334
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 115/311 (36%), Gaps = 24/311 (7%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE------ 71
++ ++ + ++ + RI +NG+VIT D+ + +A L++L
Sbjct: 30 LLVTCALMLACLPARATEIVDRIVAVVNGQVITSYDLDRELAPYLMQLSGRKLNAQDEQQ 89
Query: 72 ---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ K + L+ + L E ++ + + V Q ++ ++ ED L ++
Sbjct: 90 LTVVRKKLLDRLVDDILLLMEAKRLNLEVNDTEVENHIRQFRQSNSMTEEDLGRQLQREN 149
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ +K+ + + V+ K + EI + K+ + + L +P
Sbjct: 150 MTREEYKRNIRESMLRHRVLSFMVRRKVLVTDEEILRYYDEHKSDYTQAKEVELGLILLP 209
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
N+ + +R+ AE S K++ S G L S+L Q++
Sbjct: 210 PNEDSDGLV--QRLGKAEIS------FEEAARKYSKGPGAQSGGSIGRLKWSELASQWRE 261
Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
L + + P+ + + ++ + + + + K AEY
Sbjct: 262 ALAQIHPGEISEPFSIDGNKAILKLKAIIPGKERSLDEVRE-EIRQKLYDPKYAVQYAEY 320
Query: 305 VKKLRSNAIIH 315
++ L++ AI+
Sbjct: 321 MQDLKTKAIVD 331
>gi|332095342|gb|EGJ00365.1| chaperone surA [Shigella boydii 5216-82]
Length = 428
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNTAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHTRHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|120556415|ref|YP_960766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter
aquaeolei VT8]
gi|120326264|gb|ABM20579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter
aquaeolei VT8]
Length = 447
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 98/272 (36%), Gaps = 17/272 (6%)
Query: 22 LIIFCIVPIVSYKSWAMSSR-----IRTTINGEVITDGDISKRIALL--KLQKINGEL-- 72
L I + +V A + R + ++ EVI ++ RI + +L L
Sbjct: 9 LTILLTLAMVVLSVTAQAERKLLDRVVAIVDDEVILQSELDARINTIVGRLSAQGTGLPP 68
Query: 73 ----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
E+ + +LI E+L+ Q ++ G+ N +N AR+ G++ +F L ++G
Sbjct: 69 RELLEQRVLDQLIQESLQLQMADQMGMRISDNELNETLANIARSNGMTLAEFEGQLAEEG 128
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ ++ + + + V + + + E+ Q + + R I
Sbjct: 129 VTYQQAREQIRNEMLTSRVQQRRVGNRVRVTDREVENYLQAQQANGSTDAEYRLAYIFIE 188
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ ++ V + + A+ R ++ + + + + G + ES L
Sbjct: 189 VDDPASEASVDEARETAQALRQQIANGRDFREVAVAESDASNALEGGDMGWRSESQLPSL 248
Query: 246 FQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ + G + + DKR
Sbjct: 249 VAPVVPDLEVGEPSQVLENNSGFHLVMVMDKR 280
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + ++++ +R +L + ++ ++RI++ + +L+ D L + S
Sbjct: 279 KRGGEQQQFIQQHRVRHIL--VRPSEAVTDVQAEQRIREIYQ-QLQDGADFADLARERSD 335
Query: 226 --IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-E 281
+ G ++ + P F+ + ++Q P+ +Q G + + ++R E
Sbjct: 336 DPVSGSDGGNLGWVSPGQMVPAFEEAMNQAQVGEYFGPFRSQFGWHILQVEERRRQDVTE 395
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ K E +++++R A + +
Sbjct: 396 QNRESQARQAIYMRKFELELQNWLREIRDEAFVEF 430
>gi|170768498|ref|ZP_02902951.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
albertii TW07627]
gi|170122602|gb|EDS91533.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
albertii TW07627]
Length = 428
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A Q +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVEALAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVEALAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|157147527|ref|YP_001454846.1| peptidyl-prolyl cis-trans isomerase SurA [Citrobacter koseri ATCC
BAA-895]
gi|157084732|gb|ABV14410.1| hypothetical protein CKO_03327 [Citrobacter koseri ATCC BAA-895]
Length = 428
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 97/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLSYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A Q +N E + +L +P+N
Sbjct: 127 TYRSQIRKEMIISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + R D KL S G+ + +L F
Sbjct: 187 PTSDQVSEAEARARSIVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 96/317 (30%), Gaps = 61/317 (19%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
T + R+A L +E+I+ ++ E+ + +T V+ Q
Sbjct: 110 TLDQMRSRLAYDGLSY--STYRSQIRKEMIISEVRNNEVRRR-VTILPQEVDALAQQVGN 166
Query: 112 NT-----------------GLSAEDFSSF----------------LDKQGIGDNHFKQYL 138
+++ S K I + +Q L
Sbjct: 167 QNDASTELNLSHILIPLPENPTSDQVSEAEARARSIVDEARNGSDFGKLAITYSADQQAL 226
Query: 139 AI-QSIWPDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
Q W + + G +++ + + ++I+V E
Sbjct: 227 KGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVH 286
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
R +L + + + ++++ K S+ + G +
Sbjct: 287 ARHILLK--PSPIMTDQQARLKLEEIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWA 344
Query: 238 LESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPT 295
P F++ L + ++ + P + G I + D R++ A + + +
Sbjct: 345 AADIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNR 404
Query: 296 KIEKHEAEYVKKLRSNA 312
K + A ++++ R++A
Sbjct: 405 KFSEEAATWMQEQRASA 421
>gi|325981517|ref|YP_004293919.1| SurA domain [Nitrosomonas sp. AL212]
gi|325531036|gb|ADZ25757.1| SurA domain [Nitrosomonas sp. AL212]
Length = 441
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETLKKQEIEKS 93
I +N +VIT ++ + I ++Q+ + LE+ ++ +I + ++ Q ++
Sbjct: 39 IVAVVNEDVITRHELDEAIKTAISRMQQQGMQIPDRHILEEQVLESVITKRIQIQHAQEV 98
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G++ ++ + A + L+ +F + L+ GI N F++ + + I + + +
Sbjct: 99 GLSVAETELDETINRIAEDNQLTLPEFHTVLENDGISYNKFREEIREEMIIARLKEREVK 158
Query: 154 LKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ E E+ Q + V EY + ++ +P+N +Q + + +RLR
Sbjct: 159 HQVNVTEGEVDNFLQTQEASAVGDDEYRLAHIMILVPENMTADQIQQRAERAEMALTRLR 218
Query: 212 LPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
+ +++ S D + G ++ S + P F +L+ + T+ + G
Sbjct: 219 EGAEFSQIVSEFSDAADAKNGGIIEWRPISQMGPAFAQILEALQPGDITSIVQSPNGFHI 278
Query: 270 IAICDKR 276
+ +R
Sbjct: 279 FKLLGRR 285
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 100/301 (33%), Gaps = 62/301 (20%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+ +E+I+ LK++E++ + V+ F + +
Sbjct: 140 REEIREEMIIARLKEREVKHQ-VNVTEGEVDNFLQTQEASAVGDDEYRLAHIMILVPENM 198
Query: 116 SAEDFSSFLDKQGIGDNHFKQ-----YL------AIQSIWPDVVKNDFMLKYGNLEMEI- 163
+A+ ++ + ++ + A + +++ + + G +I
Sbjct: 199 TADQIQQRAERAEMALTRLREGAEFSQIVSEFSDAADAKNGGIIEWRPISQMGPAFAQIL 258
Query: 164 ------------------------PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q+ + + + R +L I + +N G ++
Sbjct: 259 EALQPGDITSIVQSPNGFHIFKLLGRRAQETPTVIIDQTHARHILIKINELTSENDGKLK 318
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNT 257
A + RL + ++ + S+ S G +L D P F+ ++
Sbjct: 319 I---LALKDRLDRGESFEEVARLYSEDASASSGGDLGWLSPGDTVPDFERVMNALLPGEI 375
Query: 258 TNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++P +Q G I + ++R D+ + + K + +++++LR A I
Sbjct: 376 SDPVRSQFGWHLIQVMERRTQDISLDR-RRQTARQAIRTRKADVVIQDWLQQLRDQAYIE 434
Query: 316 Y 316
Y
Sbjct: 435 Y 435
>gi|84625193|ref|YP_452565.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|121956520|sp|Q2NZI6|SURA_XANOM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|84369133|dbj|BAE70291.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 463
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 108/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I I P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTISPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ LI+ L+ + SGI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLILVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-TQQAATGSKYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDA-EESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D + + D +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKTLIDKGELDFPAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMKPGQVAGPLRGPSGFQLLKLMEMRDANAGGEKKMVTEYNARHILVRVGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 92/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALTQQAATGSKYHLAHILIGLPEGA 190
Query: 116 SAEDFSSFLDK-QGI--------------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE ++ K G+ N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKTLIDKGELDFPAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ ME+ + V EY R +L + DN Q
Sbjct: 248 AQLIRDMKPGQVAGPLRGPSGFQLLKLMEMRDANAGGEKKMVTEYNARHILVRVGDN--Q 305
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-QNLL 250
+ + +I R+ D K +S+ + G + P F + +
Sbjct: 306 TEAQAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 GLADGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + Y
Sbjct: 425 GEAYVSY 431
>gi|198284724|ref|YP_002221045.1| SurA domain [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198249245|gb|ACH84838.1| SurA domain [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 477
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 98/260 (37%), Gaps = 23/260 (8%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVET 84
++ ++ +N +IT + +R+ ++ + L + +Q++I++
Sbjct: 66 QNTQNLDKVVAVVNDNIITSMQLEQRVGAVRARLQTQNPNAMPPEDILRRQVLQQMILQD 125
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAI 140
++ Q ++GI D T++ A+ L+ + L QG F + + +
Sbjct: 126 IELQIAHRAGIKVDKATLDQAISNLAQANHLTPDQLRQALANQGQSWERFTHDLEDRILV 185
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ V+N + E+ Q++K + + ++ + +PDN + +
Sbjct: 186 DRLMQQEVENRVHIGPD----EVKTFAQQLKEMGGVSFDLQQIFIPLPDNPTPDAVGAAR 241
Query: 201 RIKDAEESRLRLPKD--CNKLEKFASKIHDVS-IGKAQYLLESDLHPQ-FQNLLKKSQNN 256
R DAE++R + ++ S D G+ ++ +L P Q LL+
Sbjct: 242 R--DAEQARDHVLAGERFGRVATQVSSGRDALQGGRLGWIKAGELPPAVAQTLLQLKVGE 299
Query: 257 TTNPYVTQKGVEYIAICDKR 276
+ G + D +
Sbjct: 300 ISPVIPGPTGFHIFKLLDVK 319
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 5/150 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
K TV E ++ ++ +LQ + I+ A +S R + +
Sbjct: 319 KHGQPTVTEVKTAMIVLRAGNSLQLQEAEARAQDIQQALQSGTRFSELARSYSQDPRTA- 377
Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALK 285
+ G+ ++ L + LL ++P + + +R E +
Sbjct: 378 -ANGGEMGWVAPGQLPDSLERTLLTLQPGGVSSPIRVGNAIYILHSQAQRQQAVEEKQIM 436
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A Q + + E+ +++R A +
Sbjct: 437 AAARMQLYNRIVHERMDEWQRRIRDGAYVE 466
>gi|77917707|ref|YP_355522.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus
DSM 2380]
gi|77543790|gb|ABA87352.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus
DSM 2380]
Length = 316
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/314 (18%), Positives = 109/314 (34%), Gaps = 16/314 (5%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ 70
Y +L I ++ S S SRI +N ++IT + + I + +
Sbjct: 1 MKYLILSIALLMLATSPLSAETISRIAAIVNQDIITTAQLDREIDKMLSAEAQETGITPV 60
Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
EL + +LI +TL Q IEK G+ V ++ E L Q
Sbjct: 61 QREELRHKMLDKLIEDTLLNQRIEKLGLHVSDEAVEQAINDVQAQNNITREQLKQALVAQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI-PANKQKMKNITVREYL-IRTVLF 185
GI + +++ L Q + ++ + K E+ + + + YL + + F
Sbjct: 121 GINFDDYRERLRQQLLNFQLIGREIQSKVEVTNTEMRDYYRSHLDDYRNDPYLRLSRITF 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+P + +LR KD ++ + V G + E L
Sbjct: 181 RLPPGNTPADIAAMRAKAADALQQLRRGKDFLEVLMQNAATSGVDGGDMGKITEGSLSES 240
Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHE 301
F + + S + T +G + + D+R+ G + +S + K
Sbjct: 241 FNRAISGLSVGQVSEIIETPEGFHLLRL-DERNPGDTQTFETVKEQISRKLMEDKRAAAL 299
Query: 302 AEYVKKLRSNAIIH 315
E+ + LR A I
Sbjct: 300 TEWTENLRKEADIE 313
>gi|121997812|ref|YP_001002599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halorhodospira
halophila SL1]
gi|121589217|gb|ABM61797.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halorhodospira
halophila SL1]
Length = 427
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 100/307 (32%), Gaps = 14/307 (4%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKIN---G 70
F+ + + + + RI + EV+ ++ + R + +
Sbjct: 5 AFLCAATLLAGLPTLAASETLDRIVAVADQEVVLASELDQEIEQIRAQFFQRGQQPPPAD 64
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+L + ++ L+++ L+ + +GI D T++ + A ++ L ++G+
Sbjct: 65 QLREQVLERLVMQRLQMGHAQGAGIQVDDATLDAAMQRIAAQNNMTLAQLRDALAQEGMD 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F++ L Q + + + EI + EY + + P+
Sbjct: 125 MASFREDLREQITVERLQQAVVQQEVEVSPQEIEEAVEAAAAQDNMEYRVAHIRIGTPEG 184
Query: 191 KLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN 248
+ +R E + D L + S S GK + L L F +
Sbjct: 185 ASSDDLRAAGERAGQIREQAVDGESDFATLAETFSDAATASEGGKIGWRLPGQLPSAFAD 244
Query: 249 LLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEY 304
++ + P G + + D+R +I + ++ + E +
Sbjct: 245 VVDGLEPGEISEPVQAADGFHIVKLIDRRSEDAQIVEETRARHILLRPGDGVEEDDVRQR 304
Query: 305 VKKLRSN 311
+ R
Sbjct: 305 LDSFRER 311
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+++ V E R +L D ++ V++R+ E R+ + L + S+
Sbjct: 271 DRRSEDAQIVEETRARHILLRPGDGVEEDD--VRQRLDSFRE-RIDEGESFEFLARQYSE 327
Query: 226 IHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK--RDLGG 280
S G + L FQ + + + + P+ T+ G + + D+ RD+
Sbjct: 328 EPGAEASGGDIGWTRSGQLVASFQERMDELEVGEVSEPFRTEYGWHIVRVEDRRERDVTD 387
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + ++ Q K ++ +++++LR A + Y
Sbjct: 388 DRRRER-IAQQIHERKSQEALEQWLRQLREEAYVDY 422
>gi|256823427|ref|YP_003147390.1| SurA domain-containing protein [Kangiella koreensis DSM 16069]
gi|256796966|gb|ACV27622.1| SurA domain protein [Kangiella koreensis DSM 16069]
Length = 427
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/304 (16%), Positives = 126/304 (41%), Gaps = 14/304 (4%)
Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRI--ALLKLQKINGEL------ 72
+I + + ++ A + ++ ++ +VI ++ +++ A +++ G+L
Sbjct: 6 ALIGFTLCLAAFSLQAEVIDKVIAHVDEDVILQSELDRKVIQAKQQIRSRGGQLPPEDVL 65
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+K +++LI+++L+ Q +SG+ + + Q A+++G++ ++F L +QGI
Sbjct: 66 KKELLEQLIIQSLQYQMAVRSGMQLQPAELQQYAAQVAQSSGMTLDEFRLSLAQQGIAYE 125
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F L + + + + + EI + Q M EY + +L ++ ++
Sbjct: 126 LFLDDLRKEILTGQLRDAFVSRRIKVSDKEIESLIQSMNAQNQVEYHLGHILIAVQEDAD 185
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLK 251
+ K+ L+ D + K S D + G + ES++ F N++
Sbjct: 186 EETQKQAKQNALKVMKELKAGADFAETAKVVSSSPDAAEGGDFGWRTESNMPTLFANVVN 245
Query: 252 -KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEYVKK 307
+ + P + G + I DKR + + ++ + E + + ++
Sbjct: 246 FLDTGDISQPIRSPSGFHILKIKDKRGEQQHLVQQTNARHILIRPDAITTESNAKQQLQN 305
Query: 308 LRSN 311
+R
Sbjct: 306 IRQR 309
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+K+ + V++ R +L I + + + ++++++ + L D K S
Sbjct: 268 KDKRGEQQHLVQQTNARHIL--IRPDAITTESNAKQQLQNIRQRVLAGEADFGDEAKKHS 325
Query: 225 KIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G + P F Q L N + P+ + G + + +R
Sbjct: 326 DDPGSAKLGGNLGWNNLGVYDPVFEQTLTDLDVNEISEPFQSNFGWHIVQLLGRRTDDQT 385
Query: 282 IALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
A+K + + K + ++++LR A
Sbjct: 386 DAMKRQQAMRILQQRKFGEEVENWIRELRDEA 417
>gi|323160075|gb|EFZ46037.1| chaperone surA [Escherichia coli E128010]
Length = 428
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPEIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPEIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|325917324|ref|ZP_08179542.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria
ATCC 35937]
gi|325536458|gb|EGD08236.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria
ATCC 35937]
Length = 463
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 41/316 (12%), Positives = 110/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
+L ++I + P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVLLASLLVITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ + SGI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVGRADGSGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+ F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMAYGDFRSSVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQATTGSQYHLAHILV 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ +Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGATADQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARHILVRIGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ + + LR+
Sbjct: 305 QTDAQAKAKIDTLRAR 320
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/321 (14%), Positives = 92/321 (28%), Gaps = 73/321 (22%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT----- 113
R L G+ E+IV+ L++ + I+ V+ Q A
Sbjct: 121 RQKLAADGMAYGDFRSSVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQATTGSQYHL 179
Query: 114 ---------GLSAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSI 143
G +A+ + L +G N +
Sbjct: 180 AHILVGLPEGATADQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEG---GDLG 236
Query: 144 WPDV--VKNDFMLKYGNLE-------------------MEIPANKQKMKNITVREYLIRT 182
W + + N F +++ +E+ + V EY R
Sbjct: 237 WRSLDEIPNAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYNARH 296
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYL 237
+L I DN+ Q + R R+ + + A + + G +
Sbjct: 297 ILVRIGDNQTDAQA-----KAKIDTLRARIAGG-AEFQATAKESSEDTNSRGQGGDLGWF 350
Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPT 295
P F + + + + P+ TQ G + R +A +
Sbjct: 351 PADAFGPDFGKQVEGLADGAVSEPFRTQAGWHIVQRVGSRQTDISAENQRAQIRETIGRR 410
Query: 296 KIEKHEAEYVKKLRSNAIIHY 316
K+E+ Y+++LR A + Y
Sbjct: 411 KLEEEYNRYLQELRGEAYVSY 431
>gi|261250209|ref|ZP_05942785.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio orientalis CIP
102891]
gi|260939325|gb|EEX95311.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio orientalis CIP
102891]
Length = 432
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 101/275 (36%), Gaps = 13/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + ++ + + +N V+ DI I LK
Sbjct: 1 MKFWKQTLLALMIASPINLVQAEPVALDTVAVIVNTSVVLQSDIDTSIKTLKANAKKKGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + ++LIV+T+++QE E+ G+ D N +N + A+N + E + +
Sbjct: 61 SLPSEEILTEQVTEKLIVDTIQQQEAERLGVRIDDNRLNEAISEIAKNNQQTVEQLRASI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRT 182
+G+ F++ + + + + L E+ + + T +Y I
Sbjct: 121 ASEGLNYAEFREQIRKEIAASEARNALVRRRINILPAEVDNLSELLAQETNATVQYKIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ + N ++ ++ + K+ + ++ + G ++ + ++
Sbjct: 181 IQLRV--NDGDDKSEIEAQAKELVKELNNGADFSTMAYTYSKGPKALQGGDWGWMRKEEM 238
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ + P+ + G + I D +
Sbjct: 239 PTIFADQIKLQNKGSVIGPFRSGVGFHILKIEDVK 273
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 7/188 (3%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q V F G ++I K ++ + V E R +L P
Sbjct: 239 PTIFADQIKLQ--NKGSVIGPFRSGVGFHILKIEDVK-GLETVAVTEVNARHILIK-PTV 294
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNL 249
L ++G + + ++++ + G+ Y P+F++
Sbjct: 295 ILSDEGVKNTLNNIIRQIKAGDATFGELAQQYSQDPGSAAQNGELGYQTSDLYVPEFKHQ 354
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ + P+ T G + I D+R++ + ALK K + + ++++
Sbjct: 355 IDTLPVGQISEPFKTVHGWHIVEILDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQE 414
Query: 308 LRSNAIIH 315
+R++A +
Sbjct: 415 IRASAYVE 422
>gi|226327125|ref|ZP_03802643.1| hypothetical protein PROPEN_00990 [Proteus penneri ATCC 35198]
gi|225204343|gb|EEG86697.1| hypothetical protein PROPEN_00990 [Proteus penneri ATCC 35198]
Length = 312
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 104/278 (37%), Gaps = 14/278 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKING 70
+K T F+ ++ + S ++A R+ +N V+ + D+++ + +K+ N
Sbjct: 10 MKNWKTLFIGLMITVGAATSSTTFAAQELNRVSAIVNNGVVLESDVNRMLQTVKMNAKNA 69
Query: 71 E--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
L + ++ L+++ + Q ++ I V A LS +
Sbjct: 70 GQEMPDEQVLRQQILERLVMDNIILQMAQQMQIDIPDAAVESTIQGIAAENKLSLDQLKK 129
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-ANKQKMKNITVR-EYLI 180
L GI N ++Q + + + +V N+ + L E+ KQ + R + +
Sbjct: 130 RLAADGISYNDYRQDIRKEMMLAEVRNNEVRRRITILPQEVDSLAKQIEGQASQRVDLNL 189
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLE 239
+L + +N + +++ ++L+ D KL S + G +
Sbjct: 190 SHILIPLSENPAPAEIEKAQQVITRIMNQLKNGTDFGKLAATYSADPQALNGGNMGWASI 249
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+L F L +Q P + G+ I + D R
Sbjct: 250 DELPTLFAKELTNAQKGQIVGPIHSGVGLHIIKVNDIR 287
>gi|320668802|gb|EFX35597.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. LSU-61]
Length = 428
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLK-KSQNNT 257
+++ K S+ + G + P F++ L ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTHLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|161523769|ref|YP_001578781.1| SurA domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189351470|ref|YP_001947098.1| peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC
17616]
gi|160341198|gb|ABX14284.1| SurA domain [Burkholderia multivorans ATCC 17616]
gi|189335492|dbj|BAG44562.1| peptidyl-prolyl cis-trans isomerase [Burkholderia multivorans ATCC
17616]
Length = 451
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 QGAQLADEVVAVVNNDVITGRELDQRVGLISRRLQQQNAPVPPIDQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + S L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRSRLEAQGVPWSIFTADARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q Q ++
Sbjct: 154 KLREREVDSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNP 260
+A + D KL K S+ D G + S L + K
Sbjct: 214 AEALLQQATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E I + D+R G A
Sbjct: 274 LIRVPDGFEIIRLVDRRQSQGATAA 298
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 AKLRPGQVNPTLIRVPDGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G ++++ D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 321 GQARQQLIDIR-RQIEAGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQ 379
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + +R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 380 DGQISQPIRTEYGYHLIQVVGRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 439
Query: 313 IIHY 316
+ Y
Sbjct: 440 YVQY 443
>gi|114319362|ref|YP_741045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkalilimnicola
ehrlichii MLHE-1]
gi|122070615|sp|Q0AC82|SURA_ALHEH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|114225756|gb|ABI55555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkalilimnicola
ehrlichii MLHE-1]
Length = 433
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 104/261 (39%), Gaps = 17/261 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALL--KLQKINGEL------EKIAVQELIVETLKKQEIE 91
RI ++ +V+ ++ + +A + +L+ L ++ ++ LI + ++ +
Sbjct: 32 DRIVAVVDDQVVLASELERELATIANQLRSRGQRLPPRDVFQRQVLERLITQRVQLSRAQ 91
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ GIT D T++ + AR ++ F ++++G N+F++ + + + +
Sbjct: 92 RVGITVDDATLDAAMQRMARQNNMTLGQFRQAVEQEGFEYNYFREGIREEIAISRLRQAQ 151
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ E+ + + + +EY + +L + P+ + +++ + E+ R +
Sbjct: 152 VEEQVTVTPQEVEEVLETL-DDENQEYRLGHILVATPE--AASTAQLEEARERIEQLREQ 208
Query: 212 LPKDCNKLEKFASKIHDVS----IGKAQYLLESDLHPQFQNLLKKS--QNNTTNPYVTQK 265
+ E A+ D + G + L S L F + + +
Sbjct: 209 IIAGETDFEGAATAFSDAASAMEGGDLGWRLHSQLPSLFAEAIDEGLQAGEVSGVLQNSS 268
Query: 266 GVEYIAICDKRDLGGEIALKA 286
G + + D+R GGE +
Sbjct: 269 GFHLVKLMDQRTQGGERVTET 289
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 6/154 (3%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+++ V E R +L + + ++ + E + +L + S+
Sbjct: 277 DQRTQGGERVTETRARHILIRTDGDVITDEDARLRLRSLLERIEA--GESFAELAEAYSE 334
Query: 226 IHD--VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G + L P+FQ + + + P+ + G + + D+R+
Sbjct: 335 DPGSAARGGDLGWTQPGQLVPEFQGAMDALEEGQISAPFASPFGWHIVQVTDRRERDVSR 394
Query: 283 AL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ L+ Q K+E+ +++++LR A +
Sbjct: 395 ERLRDQLAQQIHQRKVEEAFEQWIRRLRDEAYVD 428
>gi|325526673|gb|EGD04205.1| SurA domain-containing protein [Burkholderia sp. TJI49]
Length = 452
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 104/265 (39%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 QGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPTDQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRARLESQGVPWSIFTADARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q + ++
Sbjct: 154 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTEIEAAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+A + D KL K S+ D G + S L + + K
Sbjct: 214 AEALLQQATSGADFEKLAKNNSEASDAKKGGDLGFKSPSALPAEVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E + + D+R G A
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGATAA 298
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 69/183 (37%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
G ++++ D ++ G ++ + P+F+ + Q
Sbjct: 321 GQARQQLLDIRNQIEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQD 380
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + +RD G + + ++ Q K E+ A+++++LR ++
Sbjct: 381 GQISQPVRTEYGYHLIQVIGRRDAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 440
Query: 314 IHY 316
+ Y
Sbjct: 441 VQY 443
>gi|326319525|ref|YP_004237197.1| SurA domain-containing protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376361|gb|ADX48630.1| SurA domain protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 476
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 98/261 (37%), Gaps = 15/261 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE------LEKIAVQELIVETL 85
++ + I +N E IT+ ++ R+A +L GE L + ++ LI E +
Sbjct: 64 QAARQADFIVAVVNTEPITNNEVQARLARVEHQLAAQGGERPPRQVLAREVLERLINEKI 123
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q +SGI D ++ AR +S + L GI F+ L Q +
Sbjct: 124 QVQMAIESGIKVDDYAISQAEQSVARQNSVSIPEMHRRLAADGISPERFRSELRNQMLIQ 183
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMK-----NITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + D + ++++ + + + + E + +L ++P+N ++
Sbjct: 184 RLRERDVESRVRVTDLDVDQYMRDQQQSAISDPSKIELNLANILVAVPENATPEVVEQRR 243
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
+ R+R +D K+ + S D I G+ F +++
Sbjct: 244 QRAQQAADRVRAGEDFAKVARELSDAPDAPIGGELGLRPADRYPDLFVRTVQQVPVGGIA 303
Query: 259 NPYVTQKGVEYIAICDKRDLG 279
P + G + + ++ G
Sbjct: 304 GPVRSPAGFHVLRVLERSRAG 324
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 55/154 (35%), Gaps = 5/154 (3%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + + +R +L + +R+ + L D L + S+
Sbjct: 320 RSRAGIPSSAVQTHVRHILLRT--GPQLTEAAAAERLAEYRRRILSGQADFATLAREHSQ 377
Query: 226 IHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEI 282
G + P+F+ ++ + + P V++ GV I + ++R+ +
Sbjct: 378 DGSAKQGGDLGWAGPGRYVPEFEEAVEALKPDEISQPIVSRFGVHLIQLLERREAKLTQR 437
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + K+E+ + ++ R+ A + Y
Sbjct: 438 EQRDMVRDAVREKKLEEAFTNWAQEARARAYVEY 471
>gi|145300233|ref|YP_001143074.1| chaperone surA [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853005|gb|ABO91326.1| chaperone surA [Aeromonas salmonicida subsp. salmonicida A449]
Length = 432
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 102/275 (37%), Gaps = 12/275 (4%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--- 70
K L + +F + ++ + + ++ +N +V+ + +K
Sbjct: 3 KTLISLLTAGLFGAMSQGAFAAPELMDKVLAVVNKDVVLASQQEALVQKVKSSAQESGQS 62
Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L K A+ LI E+L+ Q ++ G+ + A + ++ + + L
Sbjct: 63 LPDDATLRKQALDRLIQESLQLQLADRQGLKISDTQLEQAIQSIAADNKMTLDQLRAQLA 122
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTV 183
++G+ +++ + + + +V +N + + E+ + ++Y + +
Sbjct: 123 REGLTYAQYREEVRREILMNEVRRNQVRRRINISDQEVKQVVDILAKQGQQQQQYHVGHI 182
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDL 242
++PDN Q K + + L+ D KL ++ + G ++ ++
Sbjct: 183 QIALPDNPSAEQLNAAKSKIERILAALKQGADFRKLAIAESNGPKALEGGDWSWMSPQEM 242
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
++ ++ + P + G+ + + D +
Sbjct: 243 PTLMAEAVQGAAKGDIVGPLRSGAGLHIVKVFDAK 277
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 54/151 (35%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFS--IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + E R +L I ++ + +G + + D + + K +
Sbjct: 278 GQQQVLQTEVKARHILIKPSIILSEEKAKGMLDGILHDIKSGKATFASLAEKYSEDPGSA 337
Query: 227 HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
V G+ + + P+F++++ + + P+ T G + + ++R +
Sbjct: 338 --VQGGELGWSDPNVYVPEFRDMVNRLKPGELSAPFRTTHGWHIVQLEERRSQDATSKAQ 395
Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315
+ Q + + ++ +LR A I
Sbjct: 396 EQRAYQLIFNRRFTEESQAWLDELRDEAYIQ 426
>gi|78046458|ref|YP_362633.1| peptidylprolyl isomerase precursor [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325928237|ref|ZP_08189442.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans
91-118]
gi|121956510|sp|Q3BX80|SURA_XANC5 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|78034888|emb|CAJ22533.1| peptidylprolyl isomerase precursor [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325541397|gb|EGD12934.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans
91-118]
Length = 463
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/316 (12%), Positives = 109/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I + P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ + +GI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQAATGSQYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGATAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGEN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 91/307 (29%), Gaps = 67/307 (21%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--------------GL 115
+ E+IV+ L++ + I+ V+ Q A G
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQAATGSQYHLAHILIGLPEGA 190
Query: 116 SAEDFS---------SFLDKQGI------------GDNHFKQYLAIQSIWPDV--VKNDF 152
+AE + L +G N + W + + N F
Sbjct: 191 TAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEG---GDLGWRSLDEIPNAF 247
Query: 153 MLKYGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+++ +E+ + V EY R +L I +N Q
Sbjct: 248 AQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGEN--Q 305
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLK 251
+ + +I R+ D K +S+ + G + P F ++
Sbjct: 306 TEAQAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVE 364
Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ TQ G + R +A + K+E+ Y+++LR
Sbjct: 365 SLTDGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELR 424
Query: 310 SNAIIHY 316
A + Y
Sbjct: 425 GEAYVSY 431
>gi|221200089|ref|ZP_03573132.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Burkholderia multivorans CGD2M]
gi|221206758|ref|ZP_03579770.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Burkholderia multivorans CGD2]
gi|221173413|gb|EEE05848.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Burkholderia multivorans CGD2]
gi|221180328|gb|EEE12732.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Burkholderia multivorans CGD2M]
Length = 453
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 36 QGAQLADEVVAVVNNDVITGRELDQRVGLISRRLQQQNAPVPPIDQLRAQVLNQMVLERI 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + S L+ QG+ + F + +
Sbjct: 96 QVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRSRLEAQGVPWSIFTADARTELMLS 155
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q Q ++
Sbjct: 156 KLREREVDSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQKK 215
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNP 260
+A + D KL K S+ D G + S L + K
Sbjct: 216 AEALLQQATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVNPT 275
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E I + D+R G A
Sbjct: 276 LIRVPDGFEIIRLVDRRQSQGATAA 300
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 265 AKLRPGQVNPTLIRVPDGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGK--SE 322
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G ++++ D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 323 GQARQQLIDIR-RQIEAGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQ 381
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + +R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 382 DGQISQPVRTEYGYHLIQVVGRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 441
Query: 313 IIHY 316
+ Y
Sbjct: 442 YVQY 445
>gi|294625755|ref|ZP_06704374.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294664833|ref|ZP_06730154.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599925|gb|EFF44043.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292605389|gb|EFF48719.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 463
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/316 (12%), Positives = 109/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I + P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ + +GI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQAATGSQYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGANAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 88/304 (28%), Gaps = 61/304 (20%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT----------GLSAED 119
+ E+IV+ L++ + I+ V+ Q A GL
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQAATGSQYHLAHILIGLPEGA 190
Query: 120 FSSFLDKQGIGDNHFKQYL----------------------AIQSIWPDV--VKNDFMLK 155
+ + + K + W + + N F
Sbjct: 191 NAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIPNAFAQL 250
Query: 156 YGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+++ +E+ + V EY R +L I DN Q +
Sbjct: 251 IRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGDN--QTEA 308
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKK-S 253
+ +I R+ D K +S+ + G + P F ++ +
Sbjct: 309 QAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVESLT 367
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P+ TQ G + R +A + K+E+ Y+++LR A
Sbjct: 368 DGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELRGEA 427
Query: 313 IIHY 316
+ Y
Sbjct: 428 YVSY 431
>gi|21241635|ref|NP_641217.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
gi|81804731|sp|Q8PP23|SURA_XANAC RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|21106996|gb|AAM35753.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 463
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/316 (12%), Positives = 109/316 (34%), Gaps = 19/316 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ + I + P+ S + RI ++ +V+ ++ + + +K Q E
Sbjct: 6 SVVLASLLAITSTVSPLASAQQSQPLDRIAAIVDEDVVLQSELDRAVRNVKSQYAGRENQ 65
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L++ ++ L++ L+ + +GI +N A+ G + + L
Sbjct: 66 LPPDDVLQRQVLERLVLVKLQVSRADGNGIRVSDEELNRAIASIAQQNGTTVDGLRQKLA 125
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+G F+ + + I + ++ + E E+ + T +Y + +L
Sbjct: 126 ADGMGYADFRASVRDEIIVQRLRQSFAQSRISVSEGEVDTAL-AQQAATGSQYHLAHILI 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPK--DCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+P+ Q ++ D ++ + + +++ + + G + ++
Sbjct: 185 GLPEGANAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIP 244
Query: 244 PQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSAQNTPT 295
F L+ P G + + + + RD K ++ +
Sbjct: 245 NAFAQLIRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGDN 304
Query: 296 KIEKHEAEYVKKLRSN 311
+ E + +R+
Sbjct: 305 QTEAQAKAKIDTIRAR 320
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 88/304 (28%), Gaps = 61/304 (20%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT----------GLSAED 119
+ E+IV+ L++ + I+ V+ Q A GL
Sbjct: 132 ADFRASVRDEIIVQRLRQSFAQSR-ISVSEGEVDTALAQQAATGSQYHLAHILIGLPEGA 190
Query: 120 FSSFLDKQGIGDNHFKQYL----------------------AIQSIWPDV--VKNDFMLK 155
+ + + K + W + + N F
Sbjct: 191 NAEQIATGQKKVDGVKALIDKGELDFSAAAVRYSDSPNALEGGDLGWRSLDEIPNAFAQL 250
Query: 156 YGNLE-------------------MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+++ +E+ + V EY R +L I DN Q +
Sbjct: 251 IRDMQPGQVAGPLRGPSGFQLLKLVEMRDANAGGEKKMVTEYHARHILVRIGDN--QTEA 308
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKK-S 253
+ +I R+ D K +S+ + G + P F ++ +
Sbjct: 309 QAKAKIDTIRA-RIVGGADFQATAKESSEDTNSRGQGGDLGWFPADAFGPDFGKQVESLT 367
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P+ TQ G + R +A + K+E+ Y+++LR A
Sbjct: 368 DGAVSEPFRTQAGWHIVQRVGSRQTDVSAENQRAQVRETIGRRKLEEEYNRYLQELRGEA 427
Query: 313 IIHY 316
+ Y
Sbjct: 428 YVSY 431
>gi|221211271|ref|ZP_03584250.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Burkholderia multivorans CGD1]
gi|221168632|gb|EEE01100.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Burkholderia multivorans CGD1]
Length = 453
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 36 QGAQLADEVVAVVNNDVITGRELDQRVGLISRRLQQQNAPVPPIDQLRAQVLNQMVLERI 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + S L+ QG+ + F + +
Sbjct: 96 QVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRSRLEAQGVPWSIFTADARTELMLS 155
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q Q ++
Sbjct: 156 KLREREVDSKITVSDAEVASYIASQRGPNASQQQDLRFQHIFIKAPTNAPQTQIEAAQKK 215
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNP 260
+A + D KL K S+ D G + S L + K
Sbjct: 216 AEALLQQATSGADFEKLAKNNSEADDAKKGGDLGFKSPSALPADVVDAAAKLRPGQVNPT 275
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E I + D+R G A
Sbjct: 276 LIRVPDGFEIIRLVDRRQSQGATAA 300
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 265 AKLRPGQVNPTLIRVPDGFEIIRLVDRRQSQGATAAAPKIVQTHVRHILLRVGEGK--SE 322
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G ++++ D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 323 GQARQQLIDIR-RQIEAGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQ 381
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + +R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 382 DGQISQPIRTEYGYHLIQVVGRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 441
Query: 313 IIHY 316
+ Y
Sbjct: 442 YVQY 445
>gi|260773615|ref|ZP_05882531.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio metschnikovii CIP
69.14]
gi|260612754|gb|EEX37957.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio metschnikovii CIP
69.14]
Length = 431
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 104/272 (38%), Gaps = 21/272 (7%)
Query: 22 LIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKINGE------ 71
L ++ + +VS + R+ +N VI DI ALL ++
Sbjct: 6 LALYTLTSLVSIATVQAQPVELDRVAVIVNSGVILQSDID--SALLTVRANAKTNQQTLP 63
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L + +++LIV+TL++QE ++ G+ D NT+N + A N + E + +Q
Sbjct: 64 PENILREQIIEKLIVDTLQQQEADRIGVRIDDNTLNDAITEIAHNNQQTPEQLRLSIAEQ 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+ F++ + + + + E++ A + +Y I +
Sbjct: 124 GLTYPEFREQIRKEIAASEARNALVRRRINIIPAEVDTLAELLAQETSATVQYKISHIQL 183
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
N Q++ V+ + + ++ + G ++ + ++
Sbjct: 184 RF--NDGQDKSEVEAQANKLVAELNQGADFSTMAITYSKGPRALQGGDWGWMRKEEMPTI 241
Query: 246 FQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F + +K +++ + P+ + G + I D +
Sbjct: 242 FADQIKMQNKGSIIGPFRSGVGFHILKIDDIK 273
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 70/189 (37%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 239 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDIK-GLETVAVTEVNARHIL--IKPT 293
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + + ++ D +L + S+ + G+ Y P+F++
Sbjct: 294 IILSDEGAKNQLNDLVRRINAGEASFAELAQQYSQDPGSAAQNGELGYQTPELYVPEFKH 353
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + A+K K + + +++
Sbjct: 354 QIETLPVGTISEPFKTVHGWHIVEVLDRREVDRTDAAMKNRAYRILFNRKFNEEASTWLQ 413
Query: 307 KLRSNAIIH 315
+LR+ A +
Sbjct: 414 ELRAGAFVE 422
>gi|71899114|ref|ZP_00681278.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
gi|71731108|gb|EAO33175.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
Length = 463
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/324 (13%), Positives = 114/324 (35%), Gaps = 23/324 (7%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQ 66
++ + ++ + + + +P+ S + RI ++ V+ ++ + I +K Q
Sbjct: 1 MTRYFSIVLSLLLAVSCVFLPVASARQQQHQPLDRIVAVVDDNVVLKSELDRAIHNVKSQ 60
Query: 67 KINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+ E L++ ++ LI+ L+ + +GI + +N A N S +
Sbjct: 61 YVGHEGQLPPDEVLQRQVLERLILIKLQVARAQTNGIRVSDDELNQAISSIAENNKTSVD 120
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L +GI F+Q + + + + + E E+ + + +Y
Sbjct: 121 GLRQKLVAEGISFPEFRQSVRDEITVHHLRQGFAQSRIVVSEGEVDTAL--AQANSGAQY 178
Query: 179 LIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQY 236
++ +L S+PD Q QK+I + + +++ + + G +
Sbjct: 179 HLQHILVSLPDGATSEQIAIAQKKINGIKSVIDKGELAFSAAAVRYSDSPNALESGDLGW 238
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--------AY 287
++ F +++ P G + + + + D + +
Sbjct: 239 RSLDEIPEAFAQMVQTMKPGQIVGPLRGTSGFQLLKLVEVHDSTAAAGPRQMATEYHARH 298
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311
+ + T + E + LR+
Sbjct: 299 ILVRITEKQKEAQAKAKIDTLRAR 322
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--I 231
EY R +L I + + + Q K D +R+ D + + +S+ + S
Sbjct: 290 MATEYHARHILVRITEKQKEAQA---KAKIDTLRARIAGGADFQTVARESSEDANNSNQG 346
Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLS 289
G + F N +K + N + P+ + G + R +A +
Sbjct: 347 GDLGWFPSDAFGADFGNHVKALADGNVSEPFRSAAGWHIVQRLGTRQTDVTRENQRAQIR 406
Query: 290 AQNTPTKIEKHEAEYVKKLRSNA 312
K+E+ ++++LRS A
Sbjct: 407 DTIGQRKLEESYERFLRELRSEA 429
>gi|320539610|ref|ZP_08039274.1| putative peptidyl-prolyl cis-trans isomerase (PPIase) [Serratia
symbiotica str. Tucson]
gi|320030222|gb|EFW12237.1| putative peptidyl-prolyl cis-trans isomerase (PPIase) [Serratia
symbiotica str. Tucson]
Length = 435
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 4/209 (1%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ LI++ ++ Q +K GIT + ++ A +S + L +G+
Sbjct: 70 LRHQIIERLIMDNIQLQMAQKMGITVSNADLDNSIANIAAQNKMSLNQLRNRLSYEGLNY 129
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
N ++ + + + +V N + E+E A + +N++ E I +L +P+
Sbjct: 130 NTYRLQIRKEMLIAEVRNNAVRRRVTILPQEVEALAKQVGAQNVSDTEMNISHILLPLPE 189
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q Q + + L D KL S G + ++ F
Sbjct: 190 NPSQQQMDSAEALARKLMGELHNGADFGKLAITYSADPQALKGGNMGWGKLQEIPTLFAE 249
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L+ + P + G + + D R
Sbjct: 250 HLVNAKKGIIVGPIRSGVGFHILKVNDIR 278
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/344 (12%), Positives = 100/344 (29%), Gaps = 70/344 (20%)
Query: 36 WAMSSRIRTTIN----GEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVET 84
M+ ++ T++ I + +++L +L+ +E+++
Sbjct: 85 LQMAQKMGITVSNADLDNSIANIAAQNKMSLNQLRNRLSYEGLNYNTYRLQIRKEMLIAE 144
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSF---- 123
++ + + +T V Q S + S
Sbjct: 145 VRNNAVRRR-VTILPQEVEALAKQVGAQNVSDTEMNISHILLPLPENPSQQQMDSAEALA 203
Query: 124 ------------LDKQGIGDNHFKQYLAIQ-SIWPDV-----------VKNDFMLKYGNL 159
K I + Q L W + V + G +
Sbjct: 204 RKLMGELHNGADFGKLAITYSADPQALKGGNMGWGKLQEIPTLFAEHLVNAKKGIIVGPI 263
Query: 160 EM-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK--RIKDAEESRL 210
++ + ++++V E R +L +Q + +D + R
Sbjct: 264 RSGVGFHILKVNDIRGASQSVSVTEVHARHILLKPSVVMTDDQARTKLASIAQDIKSGRT 323
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
+ + L + G + P F++ LLK ++ + P + G
Sbjct: 324 KFADEAKHLSQDPGSALQ--GGDLGWASPDIYDPAFRDALLKLNKGEISAPVHSAFGWHL 381
Query: 270 IAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
I + D R + A + + + K + ++++LR+ A
Sbjct: 382 IQLLDTRQVDKTDAAQKNRAYRMLFNRKFAEEAQTWMQELRAQA 425
>gi|148261608|ref|YP_001235735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum
JF-5]
gi|146403289|gb|ABQ31816.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum
JF-5]
Length = 427
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/287 (16%), Positives = 96/287 (33%), Gaps = 13/287 (4%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------ 67
++ ++ + + + A ++ I +NG VIT+ D++ R L L
Sbjct: 3 SFVSYAALIGLAAGLLAPGAPARAQTASIAAVVNGTVITNADVAARTRLFALSAGLPTTS 62
Query: 68 -INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L+ +ELI ++L+ Q IE++ + + + L L
Sbjct: 63 ATLQRLKPQITRELIDQSLQLQAIERNKVVVPEAKIAAALKRVNEANHLPPGSLQKKLAA 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLF 185
GI + Q W DV++ +I A + MK I +Y I +
Sbjct: 123 AGIPLSTLVSQFRTQIGWTDVLRKKLGPDLRPTAADIAAEEAAMKKEIGKTQYHIAEIFI 182
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHP 244
+ + +R D +LR +F+ ++ G ++ L P
Sbjct: 183 PVEN---PADVANARRFADVVIRQLRAGAPFPVVAAQFSQSQSALTGGDRGWVQPDLLDP 239
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +++K ++P G E + R G +
Sbjct: 240 AVRRIVEKMPVGAISDPVRVAGGFEIVNQLGIRQFGVGQRTTLSIRQ 286
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 7/162 (4%)
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR----IKDAEESRLRLPKDCN 217
EI + + + +P K G + ++ A R L C
Sbjct: 264 EIVNQLGIRQFGVGQRTTLSIRQVFLPFTKPFAGGQPDAQQLGVLQHANALRGTL-HSCA 322
Query: 218 KLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275
++E + V + + + F+ LL + P V+ G+ + +C +
Sbjct: 323 EVEAANAAAGSVQKSNPGPVDLTTVRPAAFRKLLSSLPLGQPSEPLVSSSGIAIVMVCKR 382
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ K + ++ + L +A I +
Sbjct: 383 ETSKIGLPGKKAIEEMLINRRVSLEAQRLMDTLHRDAEIRIF 424
>gi|194429871|ref|ZP_03062383.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli B171]
gi|194412090|gb|EDX28400.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli B171]
Length = 428
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWSRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWSRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|323975779|gb|EGB70875.1| ppic-type ppiase domain-containing protein [Escherichia coli
TW10509]
Length = 428
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SVPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|264680840|ref|YP_003280750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
gi|262211356|gb|ACY35454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
Length = 475
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 14/266 (5%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------KLQKINGELEKIAVQEL 80
V+ + + I +N E IT+ ++ R+ + EL + ++ L
Sbjct: 59 APVAAQGVRSADYIVAVVNSEPITNNEVRARMERVAQNVTEQGGQLPSQSELARQVLERL 118
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
IVE ++ QE + +GI D+ TV+ AR S L +GI + F+ +
Sbjct: 119 IVERVQLQEAKDTGINIDNMTVDQAVANVARQNNTDKAGLVSRLKAEGISEAQFRSEIRN 178
Query: 141 QSIWPDV----VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
Q + V V + +++ + K+ + +L ++P+N
Sbjct: 179 QMLMQRVRERDVDGRVKVGEADIDRYLKDQKRPGDAAAGAAANLGHILITVPENASPAVV 238
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE-SDLHPQFQNLLKKSQ- 254
++ R D + S + + G A + SD F + S
Sbjct: 239 AEREAKAKQAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRPMSDYPELFSQQVGNSAV 298
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGG 280
P+ + G + + +K G
Sbjct: 299 GAIVGPFRSGAGFHVLKVLEKSQAGA 324
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 7/189 (3%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F Q + ++ +V F G +++ Q + + + R +L ++
Sbjct: 286 PELFSQQVGNSAV-GAIV-GPFRSGAGFHVLKVLEKSQAGAPVYITQNHARHILLTV--G 341
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+ KR++D + +L + SK + G + P+F+ +
Sbjct: 342 DGMTEAQAAKRLEDYKRRVEAGQATFQQLAQEFSKDGSARNGGDLGWSSPGQFVPEFERV 401
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKK 307
L +NP V++ GV I + ++R E + + K E+ ++K+
Sbjct: 402 LDNLQPGQISNPVVSRFGVHLIQLIERRQEKLTEREQREMVRNVVRERKAEQDYETWLKE 461
Query: 308 LRSNAIIHY 316
LR A + Y
Sbjct: 462 LRGKAFVEY 470
>gi|78485996|ref|YP_391921.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
gi|121956485|sp|Q31F26|SURA_THICR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|78364282|gb|ABB42247.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
Length = 451
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 116/281 (41%), Gaps = 14/281 (4%)
Query: 19 YFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLK--LQ------KI 68
+ I+F + P ++ + + R+ +N +I ++ + L K LQ
Sbjct: 11 KLISILFILTPFFAWSAPQETLIDRVVAVVNDNIILKSELDAEVNLAKQDLQARNIPVTN 70
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD-KQ 127
EL + ++I+E L+ Q I + GI + + + A+ L+ + L+ Q
Sbjct: 71 PEELASKVLDKIILERLQLQRINQLGIKIADDELFSQIQEIAKQNNLTVIELRDRLNMSQ 130
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-TVREYLIRTVLFS 186
G F++ + Q ++ + + + + K E E+ Q+ + + EY + ++ S
Sbjct: 131 KNGFESFRERIRQQMLFQKLREVEVLSKTQVTEDEVSNFIQRQALVQSDVEYHLGHIMVS 190
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQ 245
+P++ +Q K+ ++R D +++ +++ + G +L +
Sbjct: 191 LPESATPDQRDASKQKAQEILQKIRTGGDFSQMAVRYSEGSKALQGGDLGWLGIDQIPTF 250
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
F + L + + T++ + G I + KR+ +I +
Sbjct: 251 FNDALNQLEIGETSDVIRSPVGFHIIQLQGKRNKNSQIVKQ 291
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 59/154 (38%), Gaps = 5/154 (3%)
Query: 165 ANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
K+ + V++Y + R +L S Q ++ ++ S + K
Sbjct: 279 QGKRNKNSQIVKQYHLYRFILLSEDAQNKQQPSPTLVKLAESLNSLESFKQLNEKYSDIP 338
Query: 224 SKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ ++ + G + ++ P++ Q + + P+ T+KG + + RD +
Sbjct: 339 ASVN--ANGNLGWQTAKEMSPEYYQAIEALQPGHAAKPFATEKGWVILFLDGIRDQDLSL 396
Query: 283 ALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
K + Q K + ++++L+ A+I
Sbjct: 397 KDKRKQAMQTLRMKKANESYEIWLRRLKDEALID 430
>gi|115352813|ref|YP_774652.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
gi|115282801|gb|ABI88318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
Length = 452
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 115/300 (38%), Gaps = 22/300 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 RGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q + V ++
Sbjct: 154 KLREREVDGKITVSDAEVVNYIASQRGPSAAQQQDLRFQHIFIKAPTNAPQAEIEVAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+A + D KL K S+ +D G + L + + K
Sbjct: 214 AEALLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E + + D+R G A ++ + K E + ++ +R
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G +++++D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 321 GQARQQLQDIR-RQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQ 379
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + D+R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 380 DGQISQPVRTEYGYHLIQVIDRRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 439
Query: 313 IIHY 316
+ Y
Sbjct: 440 YVQY 443
>gi|320182962|gb|EFW57830.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri CDC
796-83]
Length = 428
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGDDFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ GD+ K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGDDFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|107023645|ref|YP_621972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116690730|ref|YP_836353.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
gi|170734072|ref|YP_001766019.1| SurA domain-containing protein [Burkholderia cenocepacia MC0-3]
gi|122070635|sp|Q1BTQ6|SURA_BURCA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|105893834|gb|ABF76999.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116648819|gb|ABK09460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
gi|169817314|gb|ACA91897.1| SurA domain [Burkholderia cenocepacia MC0-3]
Length = 452
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 QGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRGRLEAQGVPWSIFTNDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q ++
Sbjct: 154 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
DA + + D +L K S+ +D G + S L + K
Sbjct: 214 ADALLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E + + D+R G A
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGASAA 298
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 76/184 (41%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G ++++ D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 321 GQARQQLVDIRN-QVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQ 379
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + ++R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 380 DGQISQPIRTEYGYHLIQVLNRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 439
Query: 313 IIHY 316
+ Y
Sbjct: 440 YVQY 443
>gi|333010545|gb|EGK29978.1| chaperone surA [Shigella flexneri VA-6]
Length = 428
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R+NA
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRANA 421
>gi|157159524|ref|YP_001456842.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli HS]
gi|157065204|gb|ABV04459.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli HS]
Length = 428
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDVFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|206559288|ref|YP_002230049.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia J2315]
gi|198035326|emb|CAR51201.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia J2315]
Length = 442
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 24 QGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRGQVLNQMVLERI 83
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + + L+ QG+ + F +
Sbjct: 84 QVQKAKDDGIRVDDATVQATLQRLAQANGMTLDQYRARLEAQGVPWSIFTNDARTELTLS 143
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q ++
Sbjct: 144 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQKK 203
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNP 260
+A + + D +L K S+ +D G + S L + K
Sbjct: 204 AEALLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVEAASKLRPGQVNPT 263
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E + + D+R G A
Sbjct: 264 LIRVPDGFEIVRLVDRRQSQGASAA 288
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 70/183 (38%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 253 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGK--SE 310
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
G ++++ D ++ G ++ + P+F+ + Q
Sbjct: 311 GQARQQLVDIRNQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQD 370
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + ++R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 371 GQISQPIRTEYGYHLIQVLNRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 430
Query: 314 IHY 316
+ Y
Sbjct: 431 VQY 433
>gi|299531915|ref|ZP_07045315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
gi|298720090|gb|EFI61047.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
Length = 475
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 14/266 (5%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------KLQKINGELEKIAVQEL 80
V+ + + I +N E IT+ ++ R+ + EL + ++ L
Sbjct: 59 APVAAQGVRSADYIVAVVNSEPITNNEVRARMERVAQNVTEQGGQLPSQSELARQVLERL 118
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
IVE ++ QE + +GI D+ TV+ AR S L +GI + F+ +
Sbjct: 119 IVERVQLQEAKDTGINIDNMTVDQAVANVARQNNTDKAGLVSRLKAEGISEAQFRSEIRN 178
Query: 141 QSIWPDV----VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
Q + V V + +++ + K+ + +L ++P+N
Sbjct: 179 QMLMQRVRERDVDGRVKVGEADIDRYLKDQKRPGDAAAGAAANLGHILITVPENASPAVV 238
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE-SDLHPQFQNLLKKSQ- 254
++ R D + S + + G A + SD F + S
Sbjct: 239 AEREAKAKQAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRPMSDYPELFSQQVGNSAV 298
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGG 280
P+ + G + + +K G
Sbjct: 299 GAIVGPFRSGAGFHVLKVLEKSQAGA 324
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 7/189 (3%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F Q + ++ +V F G +++ Q + + + R +L ++
Sbjct: 286 PELFSQQVGNSAV-GAIV-GPFRSGAGFHVLKVLEKSQAGAPVYITQNHARHILLTV--G 341
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+ KR++D + +L + SK + G + P+F+ +
Sbjct: 342 DGMTEAQAAKRLEDYKRRVEAGQATFQQLAQEFSKDGSARNGGDLGWSSPGQFVPEFERV 401
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKK 307
L+ +NP V++ GV I + ++R E + + K E+ ++K+
Sbjct: 402 LENLQPGQISNPVVSRFGVHLIQLIERRQEKLTEREQREMVRNVVRERKAEQDYETWLKE 461
Query: 308 LRSNAIIHY 316
LR A + Y
Sbjct: 462 LRGKAFVEY 470
>gi|15799738|ref|NP_285750.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
EDL933]
gi|15829312|ref|NP_308085.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. Sakai]
gi|16128047|ref|NP_414595.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str.
K-12 substr. MG1655]
gi|24111499|ref|NP_706009.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri 2a str.
301]
gi|26245979|ref|NP_752018.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli CFT073]
gi|30061620|ref|NP_835791.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri 2a str.
2457T]
gi|74310672|ref|YP_309091.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella sonnei Ss046]
gi|82542659|ref|YP_406606.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii Sb227]
gi|89106937|ref|AP_000717.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K-12
substr. W3110]
gi|91209115|ref|YP_539101.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UTI89]
gi|110804119|ref|YP_687639.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella flexneri 5 str.
8401]
gi|117622343|ref|YP_851256.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli APEC O1]
gi|157155530|ref|YP_001461225.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli E24377A]
gi|168751687|ref|ZP_02776709.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4113]
gi|168756884|ref|ZP_02781891.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4401]
gi|168762820|ref|ZP_02787827.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4501]
gi|168766748|ref|ZP_02791755.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4486]
gi|168776976|ref|ZP_02801983.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4196]
gi|168781757|ref|ZP_02806764.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4076]
gi|168785111|ref|ZP_02810118.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC869]
gi|170021589|ref|YP_001726543.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli ATCC
8739]
gi|170079716|ref|YP_001729036.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str.
K-12 substr. DH10B]
gi|170682162|ref|YP_001742174.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli SMS-3-5]
gi|188493538|ref|ZP_03000808.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli 53638]
gi|191169148|ref|ZP_03030907.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli B7A]
gi|191174100|ref|ZP_03035614.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli F11]
gi|193066223|ref|ZP_03047276.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli E22]
gi|193070992|ref|ZP_03051921.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli E110019]
gi|194434546|ref|ZP_03066804.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Shigella
dysenteriae 1012]
gi|194439697|ref|ZP_03071767.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli 101-1]
gi|195937729|ref|ZP_03083111.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. EC4024]
gi|208807378|ref|ZP_03249715.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4206]
gi|208812243|ref|ZP_03253572.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4045]
gi|208818190|ref|ZP_03258510.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4042]
gi|209398433|ref|YP_002268663.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4115]
gi|209917245|ref|YP_002291329.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli SE11]
gi|215485217|ref|YP_002327648.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O127:H6
str. E2348/69]
gi|217325032|ref|ZP_03441116.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. TW14588]
gi|218552638|ref|YP_002385551.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli IAI1]
gi|218556994|ref|YP_002389907.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli S88]
gi|218687931|ref|YP_002396143.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli ED1a]
gi|218693525|ref|YP_002401192.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 55989]
gi|218698475|ref|YP_002406104.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli IAI39]
gi|218703314|ref|YP_002410833.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UMN026]
gi|227885046|ref|ZP_04002851.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 83972]
gi|238899458|ref|YP_002925254.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
BW2952]
gi|253774915|ref|YP_003037746.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254037470|ref|ZP_04871547.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|254160178|ref|YP_003043286.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B str.
REL606]
gi|254791192|ref|YP_003076029.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. TW14359]
gi|256020107|ref|ZP_05433972.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella sp. D9]
gi|256025370|ref|ZP_05439235.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia sp. 4_1_40B]
gi|260842290|ref|YP_003220068.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str.
12009]
gi|260853267|ref|YP_003227158.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str.
11368]
gi|260866207|ref|YP_003232609.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str.
11128]
gi|261226813|ref|ZP_05941094.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255216|ref|ZP_05947749.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O157:H7 str.
FRIK966]
gi|291280879|ref|YP_003497697.1| Chaperone surA precursor [Escherichia coli O55:H7 str. CB9615]
gi|293403128|ref|ZP_06647225.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli
FVEC1412]
gi|293408148|ref|ZP_06651988.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B354]
gi|293417931|ref|ZP_06660553.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B185]
gi|293476717|ref|ZP_06665125.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B088]
gi|297516939|ref|ZP_06935325.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli OP50]
gi|298378656|ref|ZP_06988540.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli
FVEC1302]
gi|300900923|ref|ZP_07119058.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1]
gi|300919606|ref|ZP_07136098.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1]
gi|300928648|ref|ZP_07144167.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1]
gi|300948657|ref|ZP_07162741.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1]
gi|300956983|ref|ZP_07169235.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1]
gi|300981029|ref|ZP_07175306.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1]
gi|300984196|ref|ZP_07176924.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1]
gi|301024798|ref|ZP_07188436.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1]
gi|301048439|ref|ZP_07195466.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1]
gi|301648380|ref|ZP_07248116.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1]
gi|306815347|ref|ZP_07449496.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli NC101]
gi|307136656|ref|ZP_07496012.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli H736]
gi|307311493|ref|ZP_07591135.1| Peptidylprolyl isomerase [Escherichia coli W]
gi|309796042|ref|ZP_07690454.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7]
gi|312966176|ref|ZP_07780402.1| chaperone surA [Escherichia coli 2362-75]
gi|312970148|ref|ZP_07784330.1| chaperone surA [Escherichia coli 1827-70]
gi|331640505|ref|ZP_08341653.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli H736]
gi|331645163|ref|ZP_08346274.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli M605]
gi|331661095|ref|ZP_08362027.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA206]
gi|331671573|ref|ZP_08372371.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA280]
gi|331681439|ref|ZP_08382076.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli H299]
gi|332281260|ref|ZP_08393673.1| survival protein surA [Shigella sp. D9]
gi|81174735|sp|P0ABZ8|SURA_ECO57 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|81174736|sp|P0ABZ7|SURA_ECOL6 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|81174737|sp|P0ABZ6|SURA_ECOLI RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; AltName: Full=Survival protein A;
Flags: Precursor
gi|81174738|sp|P0ABZ9|SURA_SHIFL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|121956477|sp|Q326I0|SURA_SHIBS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|121956482|sp|Q3Z5V6|SURA_SHISS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|122070645|sp|Q1RGE4|SURA_ECOUT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|12512748|gb|AAG54358.1|AE005182_7 survival protein [Escherichia coli O157:H7 str. EDL933]
gi|26106376|gb|AAN78562.1|AE016755_62 Survival protein surA precursor [Escherichia coli CFT073]
gi|1786238|gb|AAC73164.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str.
K-12 substr. MG1655]
gi|13359514|dbj|BAB33481.1| survival protein [Escherichia coli O157:H7 str. Sakai]
gi|24050252|gb|AAN41716.1| survival protein [Shigella flexneri 2a str. 301]
gi|30039862|gb|AAP15596.1| survival protein [Shigella flexneri 2a str. 2457T]
gi|73854149|gb|AAZ86856.1| survival protein [Shigella sonnei Ss046]
gi|81244070|gb|ABB64778.1| survival protein [Shigella boydii Sb227]
gi|85674304|dbj|BAB96620.2| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K12
substr. W3110]
gi|91070689|gb|ABE05570.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli UTI89]
gi|110613667|gb|ABF02334.1| survival protein [Shigella flexneri 5 str. 8401]
gi|115511467|gb|ABI99541.1| survival protein [Escherichia coli APEC O1]
gi|157077560|gb|ABV17268.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli E24377A]
gi|169756517|gb|ACA79216.1| SurA domain [Escherichia coli ATCC 8739]
gi|169887551|gb|ACB01258.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli str.
K-12 substr. DH10B]
gi|170519880|gb|ACB18058.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli SMS-3-5]
gi|187767718|gb|EDU31562.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4196]
gi|188014319|gb|EDU52441.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4113]
gi|188488737|gb|EDU63840.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli 53638]
gi|189000667|gb|EDU69653.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4076]
gi|189356117|gb|EDU74536.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4401]
gi|189363909|gb|EDU82328.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4486]
gi|189366936|gb|EDU85352.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4501]
gi|189375016|gb|EDU93432.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC869]
gi|190900823|gb|EDV60613.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli B7A]
gi|190905594|gb|EDV65219.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli F11]
gi|192926148|gb|EDV80789.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli E22]
gi|192955722|gb|EDV86196.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli E110019]
gi|194417199|gb|EDX33310.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Shigella
dysenteriae 1012]
gi|194421382|gb|EDX37399.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli 101-1]
gi|208727179|gb|EDZ76780.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4206]
gi|208733520|gb|EDZ82207.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4045]
gi|208738313|gb|EDZ85995.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4042]
gi|209159833|gb|ACI37266.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. EC4115]
gi|209746874|gb|ACI71744.1| survival protein [Escherichia coli]
gi|209746876|gb|ACI71745.1| survival protein [Escherichia coli]
gi|209746878|gb|ACI71746.1| survival protein [Escherichia coli]
gi|209746880|gb|ACI71747.1| survival protein [Escherichia coli]
gi|209746882|gb|ACI71748.1| survival protein [Escherichia coli]
gi|209910504|dbj|BAG75578.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE11]
gi|215263289|emb|CAS07604.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
O127:H6 str. E2348/69]
gi|217321253|gb|EEC29677.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli O157:H7 str. TW14588]
gi|218350257|emb|CAU95940.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
55989]
gi|218359406|emb|CAQ96945.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
IAI1]
gi|218363763|emb|CAR01424.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli S88]
gi|218368461|emb|CAR16197.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
IAI39]
gi|218425495|emb|CAR06277.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
ED1a]
gi|218430411|emb|CAR11278.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
UMN026]
gi|222031887|emb|CAP74625.1| chaperone surA [Escherichia coli LF82]
gi|226840576|gb|EEH72578.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|227837875|gb|EEJ48341.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli 83972]
gi|238861990|gb|ACR63988.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
BW2952]
gi|242375892|emb|CAQ30573.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
BL21(DE3)]
gi|253325959|gb|ACT30561.1| Peptidylprolyl isomerase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972079|gb|ACT37750.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli B
str. REL606]
gi|253976288|gb|ACT41958.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
BL21(DE3)]
gi|254590592|gb|ACT69953.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli
O157:H7 str. TW14359]
gi|257751916|dbj|BAI23418.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str.
11368]
gi|257757437|dbj|BAI28934.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str.
12009]
gi|257762563|dbj|BAI34058.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str.
11128]
gi|260450738|gb|ACX41160.1| SurA domain protein [Escherichia coli DH1]
gi|281177270|dbj|BAI53600.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE15]
gi|281599414|gb|ADA72398.1| Chaperone surA precursor [Shigella flexneri 2002017]
gi|284919836|emb|CBG32891.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase)
[Escherichia coli 042]
gi|290760752|gb|ADD54713.1| Chaperone surA precursor [Escherichia coli O55:H7 str. CB9615]
gi|291321170|gb|EFE60612.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B088]
gi|291430043|gb|EFF03057.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli
FVEC1412]
gi|291430649|gb|EFF03647.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B185]
gi|291472399|gb|EFF14881.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli B354]
gi|294492943|gb|ADE91699.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Escherichia
coli IHE3034]
gi|298280990|gb|EFI22491.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli
FVEC1302]
gi|299880288|gb|EFI88499.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1]
gi|300299732|gb|EFJ56117.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1]
gi|300306726|gb|EFJ61246.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1]
gi|300316273|gb|EFJ66057.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1]
gi|300355586|gb|EFJ71456.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1]
gi|300409065|gb|EFJ92603.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1]
gi|300413352|gb|EFJ96662.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1]
gi|300451883|gb|EFK15503.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1]
gi|300463317|gb|EFK26810.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1]
gi|301073515|gb|EFK88321.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1]
gi|305851009|gb|EFM51464.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli NC101]
gi|306908472|gb|EFN38970.1| Peptidylprolyl isomerase [Escherichia coli W]
gi|307551900|gb|ADN44675.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli ABU 83972]
gi|307629629|gb|ADN73933.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UM146]
gi|308120284|gb|EFO57546.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7]
gi|309700266|emb|CBI99554.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase)
[Escherichia coli ETEC H10407]
gi|310337646|gb|EFQ02757.1| chaperone surA [Escherichia coli 1827-70]
gi|312289419|gb|EFR17313.1| chaperone surA [Escherichia coli 2362-75]
gi|312944661|gb|ADR25488.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O83:H1
str. NRG 857C]
gi|313646568|gb|EFS11029.1| chaperone surA [Shigella flexneri 2a str. 2457T]
gi|315059279|gb|ADT73606.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia coli W]
gi|315134749|dbj|BAJ41908.1| chaperone surA precursor [Escherichia coli DH1]
gi|315285117|gb|EFU44562.1| PPIC-type PPIASE domain protein [Escherichia coli MS 110-3]
gi|315298427|gb|EFU57682.1| PPIC-type PPIASE domain protein [Escherichia coli MS 16-3]
gi|315616170|gb|EFU96789.1| chaperone surA [Escherichia coli 3431]
gi|320190424|gb|EFW65074.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. EC1212]
gi|320197500|gb|EFW72114.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli
WV_060327]
gi|320200427|gb|EFW75013.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli EC4100B]
gi|320647458|gb|EFX16253.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H-
str. 493-89]
gi|320652792|gb|EFX21030.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H-
str. H 2687]
gi|320658181|gb|EFX25910.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320663490|gb|EFX30774.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O55:H7
str. USDA 5905]
gi|323166105|gb|EFZ51884.1| chaperone surA [Shigella sonnei 53G]
gi|323171213|gb|EFZ56861.1| chaperone surA [Escherichia coli LT-68]
gi|323176362|gb|EFZ61954.1| chaperone surA [Escherichia coli 1180]
gi|323181750|gb|EFZ67163.1| chaperone surA [Escherichia coli 1357]
gi|323190264|gb|EFZ75540.1| chaperone surA [Escherichia coli RN587/1]
gi|323380164|gb|ADX52432.1| SurA domain protein [Escherichia coli KO11]
gi|323935106|gb|EGB31473.1| ppic-type ppiase domain-containing protein [Escherichia coli E1520]
gi|323939725|gb|EGB35927.1| ppic-type ppiase domain-containing protein [Escherichia coli E482]
gi|323945684|gb|EGB41732.1| ppic-type ppiase domain-containing protein [Escherichia coli H120]
gi|323950947|gb|EGB46824.1| ppic-type ppiase domain-containing protein [Escherichia coli H252]
gi|323955251|gb|EGB51024.1| ppic-type ppiase domain-containing protein [Escherichia coli H263]
gi|323960002|gb|EGB55648.1| ppic-type ppiase domain-containing protein [Escherichia coli H489]
gi|323970727|gb|EGB65981.1| ppic-type ppiase domain-containing protein [Escherichia coli TA007]
gi|324008401|gb|EGB77620.1| PPIC-type PPIASE domain protein [Escherichia coli MS 57-2]
gi|324012311|gb|EGB81530.1| PPIC-type PPIASE domain protein [Escherichia coli MS 60-1]
gi|324017678|gb|EGB86897.1| PPIC-type PPIASE domain protein [Escherichia coli MS 117-3]
gi|324118405|gb|EGC12299.1| ppic-type ppiase domain-containing protein [Escherichia coli E1167]
gi|326345227|gb|EGD68970.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. 1125]
gi|326346920|gb|EGD70654.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. 1044]
gi|331040251|gb|EGI12458.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli H736]
gi|331045920|gb|EGI18039.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli M605]
gi|331052137|gb|EGI24176.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA206]
gi|331071418|gb|EGI42775.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA280]
gi|331081660|gb|EGI52821.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli H299]
gi|332097929|gb|EGJ02902.1| chaperone surA [Shigella dysenteriae 155-74]
gi|332098944|gb|EGJ03895.1| chaperone surA [Shigella boydii 3594-74]
gi|332103612|gb|EGJ06958.1| survival protein surA [Shigella sp. D9]
gi|332341385|gb|AEE54719.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli UMNK88]
gi|332762289|gb|EGJ92556.1| chaperone surA [Shigella flexneri 2747-71]
gi|332762614|gb|EGJ92879.1| chaperone surA [Shigella flexneri 4343-70]
gi|332764896|gb|EGJ95124.1| chaperone surA [Shigella flexneri K-671]
gi|332768842|gb|EGJ99021.1| peptidyl-prolyl cis-trans isomerase [Shigella flexneri 2930-71]
gi|333009456|gb|EGK28912.1| chaperone surA [Shigella flexneri K-218]
gi|333011437|gb|EGK30851.1| chaperone surA [Shigella flexneri K-272]
gi|333021676|gb|EGK40925.1| chaperone surA [Shigella flexneri K-227]
gi|333022418|gb|EGK41656.1| chaperone surA [Shigella flexneri K-304]
Length = 428
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|254247257|ref|ZP_04940578.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia PC184]
gi|124872033|gb|EAY63749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia PC184]
Length = 454
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 36 QGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ + + L+ QG+ + F + +
Sbjct: 96 QVQKAKDDGIRIDDATVQATLQRLAQANGMTLDQYRGRLEAQGVPWSIFTNDARTELMLS 155
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q ++
Sbjct: 156 KLREREVDGKITVSDAEVANYIASQRGPNASQQQDLRFQHIFIKAPTNAPQADIEAAQKK 215
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
DA + + D +L K S+ +D G + S L + K
Sbjct: 216 ADALLQQAKSGADFERLAKNNSEANDAKKGGDLGFKSPSALPADVVDAASKLRPGQVNPT 275
Query: 261 -YVTQKGVEYIAICDKRDLGGEIAL 284
G E + + D+R G A
Sbjct: 276 LIRVPDGFEIVRLVDRRQSQGASAA 300
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 70/183 (38%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 265 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGK--SE 322
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
G ++++ D ++ G ++ + P+F+ + Q
Sbjct: 323 GQARQQLIDIRNQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQD 382
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + ++R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 383 GQISQPIRTEYGYHLIQVLNRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 442
Query: 314 IHY 316
+ Y
Sbjct: 443 VQY 445
>gi|78224732|ref|YP_386479.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
gi|78195987|gb|ABB33754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
Length = 333
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 59/319 (18%), Positives = 108/319 (33%), Gaps = 19/319 (5%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----------RIALLK 64
++ T + I + S + +RI +N E+IT + K R
Sbjct: 1 MIKTLITATLVLIATLPSPSHAEVVNRILAVVNDEIITSYAVEKEKATILKEAERQQPPP 60
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ L++ A+ LI + L +Q++ + I V R LS E S L
Sbjct: 61 PPESLVHLDETALNRLIDKKLVEQKVRELDIKVSEEEVRQAIEDVKRQNKLSQESLVSAL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
QG+ + +K + Q +V + K E E+ + + R
Sbjct: 121 ANQGLSFDQYKVQIREQLERLRLVSQEVRSKIQVGEREMREYYEANPGRFGGEENFRARN 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLES 240
+ F + + +Q R KD +L + S + G +
Sbjct: 181 IYFKLDEKMPADQVKKIMTTALTVLHEARDGKDFAELARQHSDDPAAKNTGGDLGTFRKG 240
Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTK 296
D+ P+F+ L+K ++ G+ + + + R G KA + K
Sbjct: 241 DILPEFEESLIKMKPGEVSDLIYVSGGLHIVKL-EARFAGTPKPFEQVKAEVEDILYRKK 299
Query: 297 IEKHEAEYVKKLRSNAIIH 315
E+ ++V LR A I
Sbjct: 300 SEERFNQWVADLRKGAAIE 318
>gi|146310266|ref|YP_001175340.1| peptidyl-prolyl cis-trans isomerase SurA [Enterobacter sp. 638]
gi|145317142|gb|ABP59289.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter sp.
638]
Length = 428
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ +V S+ + + ++ +N V+ + D++ + +KL L
Sbjct: 7 LLLGIAMVANTSFAAPQVVDKVAAVVNNGVVLESDVNGMMQSVKLNSGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ ++ ++ + S L GI
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKVTDEQLDQAIANISKQNNMTLDQMRSRLAYDGISYA 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTILPQEVDQLAKQVGNQNDASTELNLSHILVPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF-QN 248
+Q + + + R D KL S G+ + +L F Q
Sbjct: 187 PTSDQAAEAESQARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSIFGQA 246
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D+R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDRR 274
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 91/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+++ ++ E+ + +T V+ Q S E
Sbjct: 129 RNQIRKEMLISEVRNNEVRRR-VTILPQEVDQLAKQVGNQNDASTELNLSHILVPLPENP 187
Query: 119 ----------DFSSFLDKQ---------GIGDNHFKQYLAI-QSIWPDV----------- 147
S +++ I + +Q L Q W +
Sbjct: 188 TSDQAAEAESQARSIVEQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSIFGQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + +NI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDRRGQSQNISVTEVHARHILLK--PSPIMTDDQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+++ K S+ + G + P F++ L+K ++
Sbjct: 306 KMEQIAADIKSGKTSFANAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSTFGWHLIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASA 421
>gi|320179614|gb|EFW54563.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii ATCC
9905]
Length = 428
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTAFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|237704199|ref|ZP_04534680.1| surA [Escherichia sp. 3_2_53FAA]
gi|226902111|gb|EEH88370.1| surA [Escherichia sp. 3_2_53FAA]
Length = 428
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG--FV 198
+ G +++ + + KNI+V E R +L Q +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKL 307
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNT 257
++ D + + + + S + G + P F++ L + ++
Sbjct: 308 EQIAADIKSGKTTFAAAAKEFSQDPSSANQ--GGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|326405098|ref|YP_004285180.1| putative peptidyl-prolyl cis-trans isomerase SurA [Acidiphilium
multivorum AIU301]
gi|325051960|dbj|BAJ82298.1| putative peptidyl-prolyl cis-trans isomerase SurA [Acidiphilium
multivorum AIU301]
Length = 427
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/287 (16%), Positives = 94/287 (32%), Gaps = 13/287 (4%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------ 67
++ ++ + + + A + I +NG VIT+ D++ R L L
Sbjct: 3 SFVSYAALIGLAAGLLAPGAPARAQTVSIAAVVNGTVITNADVAARTRLFALSAGLPTTS 62
Query: 68 -INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L+ +ELI + L+ Q IE++ + + + L L
Sbjct: 63 ATLQRLKPQITRELIDQALQLQAIERNKVVVPEAKIAAALKRVNEANHLPPGSLQKKLAA 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLF 185
GI + Q W DV++ +I A + MK I +Y I +
Sbjct: 123 AGIPLSTLVSQFRTQIGWTDVLRKKLGPDLRPTAADIAAEEAAMKKEIGKTQYHIAEIFI 182
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESDLHP 244
+ + +R D +LR +F+ ++ G ++ L P
Sbjct: 183 PVEN---PADVANARRFADVVIRQLRAGAPFPVVAAQFSQSQSALTGGDRGWVQPDLLDP 239
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ +++K ++P G E + R G +
Sbjct: 240 AVRRIVEKMPVGAISDPVRVAGGFEIVNQLGIRQFGVGQRTTLSIRQ 286
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 7/162 (4%)
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR----IKDAEESRLRLPKDCN 217
EI + + + +P K G + ++ A R L C
Sbjct: 264 EIVNQLGIRQFGVGQRTTLSIRQVFLPFTKPFAGGQPDAQQLGVLQHANALRGTL-HSCA 322
Query: 218 KLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275
++E + V + + + F+ LL + P V+ G+ + +C +
Sbjct: 323 EVEAANAAAGSVQKSNPGPVDLTTVRPAAFRKLLSSLPLGQPSEPLVSSSGIAIVMVCKR 382
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ K + ++ + L +A I +
Sbjct: 383 ETSKIGLPGKKAIEEMLINRRVSLEAQRLMDTLHRDAEIRIF 424
>gi|222056791|ref|YP_002539153.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
gi|221566080|gb|ACM22052.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
Length = 320
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 58/319 (18%), Positives = 109/319 (34%), Gaps = 18/319 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-ALLKLQKINGE 71
+ YF + + I P + + + +N +VIT ++ K ++K + G
Sbjct: 1 MNKFLLYFAVSVLFICPAAAKGELITA--VAAIVNDDVITTLEVQKETDQIIKEMEKKGP 58
Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L KIA+ LI + L +Q+I++ I + + L+ E +
Sbjct: 59 AETPDKAALRKIALDRLIDKKLVEQKIKELDIKVPEEELRQSIEDVKKQNNLTQEALVAA 118
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIR 181
L QG+ +K L Q ++ + K E EI + N E + R
Sbjct: 119 LAGQGLSFEQYKTQLREQLERLRLMSQEVRSKIQVGEREIREYYEANHNRYGEEEFFRAR 178
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+ F + + +++ R KD +L + S G +
Sbjct: 179 HIFFKVGKDAPESEAAKVMTTATQVLQEARSGKDFAELARQFSDDPAAKKDGGDLGTFKK 238
Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTK 296
D+ + + + ++P T G I + K +KA + K
Sbjct: 239 GDMIGEIEAAVSGMKPGEVSDPVKTAAGFHIIKLEERSKGKPRPFEEVKAEIEDLLYKKK 298
Query: 297 IEKHEAEYVKKLRSNAIIH 315
E+ ++V LR A I
Sbjct: 299 SEERFNQWVNDLRKGAAIE 317
>gi|315293370|gb|EFU52722.1| PPIC-type PPIASE domain protein [Escherichia coli MS 153-1]
Length = 428
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+ + K S+ + G + P F++ L + ++
Sbjct: 306 KREQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|218547503|ref|YP_002381294.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia fergusonii
ATCC 35469]
gi|218355044|emb|CAQ87650.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Escherichia
fergusonii ATCC 35469]
gi|324112544|gb|EGC06521.1| ppic-type ppiase domain-containing protein [Escherichia fergusonii
B253]
Length = 428
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 102/268 (38%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D++ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVNGLLQSVKLNAAQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQILERLIMDQILLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRISILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL +++ + G+ + +L F
Sbjct: 187 PSSDQVNEAESQARAIVDQARNGADFGKLAISYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDVVGPIRSGVGFHILKVNDLR 274
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 87/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+I+ ++ E+ + I+ V Q
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ISILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 116 SAEDFSSFLDKQ----------------GIGDNHFKQYLAI-QSIWPDV----------- 147
S++ + + I + +Q L Q W +
Sbjct: 188 SSDQVNEAESQARAIVDQARNGADFGKLAISYSADQQALKGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V G +++ + +NI+V E R +L + + +
Sbjct: 248 STAKKGDVVGPIRSGVGFHILKVNDLRGGSQNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|172061669|ref|YP_001809321.1| SurA domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171994186|gb|ACB65105.1| SurA domain protein [Burkholderia ambifaria MC40-6]
Length = 452
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 115/300 (38%), Gaps = 22/300 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 RGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q + V ++
Sbjct: 154 KLREREVDGKITVSDAEVVNYIASQRGPSASQQQDLRFQHIFIKAPTNAPQAEIEVAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+A + D KL K S+ +D G + L + + K
Sbjct: 214 AEALLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E + + D+R G A ++ + K E + ++ +R
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G +++++D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 321 GQARQQLQDIR-RQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQ 379
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + D+R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 380 DGQISQPVRTEYGYHLIQVIDRRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 439
Query: 313 IIHY 316
+ Y
Sbjct: 440 YVQY 443
>gi|91790684|ref|YP_551636.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
gi|122070654|sp|Q121Q4|SURA_POLSJ RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|91699909|gb|ABE46738.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
Length = 473
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 100/294 (34%), Gaps = 22/294 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----------NGELEKIAVQELIVETLKK 87
+ I +N E IT+ ++ R L++ ++ EL ++ LI + +
Sbjct: 66 QADFIVAVVNSEPITNSEV--RTKLVRTEQQIIQQGSPLPPRRELVPQVLERLISDKAQL 123
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
Q +G+ D N V AR +S ++ L GI + F+ L + + +
Sbjct: 124 QLARSAGMRVDDNAVEAAVQTVARQNQISVDELRRRLKADGIAYSQFESDLRDELLVSRL 183
Query: 148 VKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + L+ E +I ++ ++ + +L ++P+N Q +
Sbjct: 184 RQREVDLRVTVTEQDIDQFLREQEGGTELSSLALNLAQILVAVPENATPGQVAALQAKAQ 243
Query: 205 AEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYV 262
+ R D +F+ + G P F K + P
Sbjct: 244 QVMDKARGGADFAALANEFSDSPTRGTGGLMGLREADRYPPLFVESTKSLKVGGLAGPIR 303
Query: 263 TQKGVEYIAICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ G + + +KR G ++ + +P + E E + LR
Sbjct: 304 SGAGFHILKVIEKRQAGMPGSVITQTHARHILLRLSPKQGETAATEKLAALRKR 357
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/310 (11%), Positives = 90/310 (29%), Gaps = 58/310 (18%)
Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ D+ + + +L++ +L ++ I + L++QE G S +N + A
Sbjct: 171 ESDLRDELLVSRLRQREVDLRVTVTEQDIDQFLREQEG---GTELSSLALNLAQILVAVP 227
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------NDFMLKYGNLEME--- 162
+ ++ K + + + G E +
Sbjct: 228 ENATPGQVAALQAKA----QQVMDKARGGADFAALANEFSDSPTRGTGGLMGLREADRYP 283
Query: 163 ------------------------------IPANKQKMKNITVREYLIRTVLFSIPDNKL 192
I + M + + R +L + +
Sbjct: 284 PLFVESTKSLKVGGLAGPIRSGAGFHILKVIEKRQAGMPGSVITQTHARHILLRLSPKQG 343
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK----IHDVSIGKAQYLLESDLHPQFQN 248
+ + R R+ A + G + P+F+
Sbjct: 344 ETAA-----TEKLAALRKRILAGQADFAALARENSEDASAKQGGDLGWANPGMFVPEFEK 398
Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVK 306
++ + N ++P V++ GV I + ++R+ + + K E+ + +
Sbjct: 399 VMNGLAPNQISDPLVSRFGVHLIQVLERREAQMSQRDQREMARNVLRGKKQEEAYVLWAQ 458
Query: 307 KLRSNAIIHY 316
++R A + Y
Sbjct: 459 EVRGRAYVEY 468
>gi|303256196|ref|ZP_07342212.1| peptidyl-prolyl cis-trans isomerase SurA [Burkholderiales bacterium
1_1_47]
gi|331001252|ref|ZP_08324878.1| SurA protein [Parasutterella excrementihominis YIT 11859]
gi|302860925|gb|EFL84000.1| peptidyl-prolyl cis-trans isomerase SurA [Burkholderiales bacterium
1_1_47]
gi|329568979|gb|EGG50775.1| SurA protein [Parasutterella excrementihominis YIT 11859]
Length = 453
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 93/250 (37%), Gaps = 10/250 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK--LQKIN------GELEKIAVQELIVETLKKQEIE 91
RI +N +VIT+ + +RI + L++ N L + +I+E + +Q+
Sbjct: 48 DRIAAVVNHDVITEIQLQQRIHQVATNLRRRNIPLPPMDNLRDQTLDRMILERIIEQKAR 107
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+GI D N +N Q A N GL+ L GI FK + + + + + D
Sbjct: 108 DTGIRIDDNMLNGAIEQIATNNGLTVPQLEKKLAADGISVPSFKSEIRSELLTQRLRERD 167
Query: 152 FMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESR 209
K E EI K + EY + ++ S P+N + + +R A E
Sbjct: 168 VDDKIQIPESEIDQYLKDQSGPGKRMEYRLSRIVISFPENPTKAEVEAAQRTASRALEQA 227
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269
R K++ + G ++ L P L+ + P +
Sbjct: 228 QRGADFSQLAAKYSVTPEAMEGGVMGWVPAGKLPPFVVQALQNHKAGDIIPLQAGNSFQI 287
Query: 270 IAICDKRDLG 279
+ + RD G
Sbjct: 288 LKLTGVRDPG 297
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 92/300 (30%), Gaps = 44/300 (14%)
Query: 54 GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT-------------FDSN 100
+I + +L++ + + + + I + LK Q +
Sbjct: 152 SEIRSELLTQRLRERDVDDKIQIPESEIDQYLKDQSGPGKRMEYRLSRIVISFPENPTKA 211
Query: 101 TVNYFFVQHARNTGLSAE---DFSSFLDKQGIGDNHFKQYLAIQSIW------------- 144
V + A A+ DFS K + + + W
Sbjct: 212 EVEAA-QRTASRALEQAQRGADFSQLAAKYSVTPEAMEGGV---MGWVPAGKLPPFVVQA 267
Query: 145 ------PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
D++ + L++ + + VR+ +R ++ P N + +
Sbjct: 268 LQNHKAGDIIPLQAGNSFQILKLTGVRDPGEQAQQGVRQTHVRHIMMR-PSNVTPEKVVI 326
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256
+R+ + + + D L + S G +L D+ P+ + L K S
Sbjct: 327 -QRLNEIKSRLDKGDGDFQTLARLHSADPSGTRGGDLGWLYPGDVPPEMEQQLDKLSVGE 385
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P T G + D+R G + K+ ++ ++LRS A +
Sbjct: 386 ISEPIRTPYGWHIFQVLDRRTKSGINERQREQAREALREQKLGDAVLDWERRLRSEAYVE 445
>gi|187733861|ref|YP_001878866.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii CDC
3083-94]
gi|187430853|gb|ACD10127.1| chaperone/peptidyl-prolyl cis-trans isomerase SurA [Shigella boydii
CDC 3083-94]
Length = 428
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A ++R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQVRNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 87/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+I+ ++ E+ + IT V Q
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 116 SAEDFSSFLDKQGIGDNHFK--------------QYLA---IQSIWPDV----------- 147
+++ + + + + A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQVRNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ D + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPDSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|218665253|ref|YP_002427402.1| survival protein SurA [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517466|gb|ACK78052.1| survival protein SurA [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 436
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 98/260 (37%), Gaps = 23/260 (8%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---------LEKIAVQELIVET 84
++ ++ +N +IT + +R+ ++ + L + +Q++I++
Sbjct: 25 QNTQNLDKVVAVVNDNIITSMQLEQRVGAVRARLQTQNPNAMPPEDILRRQVLQQMILQD 84
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAI 140
++ Q ++GI D T++ A+ L+ + L QG F + + +
Sbjct: 85 IELQIAHRAGIKVDKATLDQAISNLAQANHLTPDQLRQALANQGQSWERFTHDLEDRILV 144
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ V+N + E+ Q++K + + ++ + +PDN + +
Sbjct: 145 DRLMQQEVENRVHIGPD----EVKTFAQQLKEMGGVSFDLQQIFIPLPDNPTPDAVGAAR 200
Query: 201 RIKDAEESRLRLPKD--CNKLEKFASKIHDVS-IGKAQYLLESDLHPQ-FQNLLKKSQNN 256
R DAE++R + ++ S D G+ ++ +L P Q LL+
Sbjct: 201 R--DAEQARDHVLAGERFGRVATQVSSGRDALQGGRLGWIKAGELPPAVAQTLLQLKVGE 258
Query: 257 TTNPYVTQKGVEYIAICDKR 276
+ G + D +
Sbjct: 259 ISPVIPGPTGFHIFKLLDVK 278
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 5/150 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
K TV E ++ ++ +LQ + I+ A +S R + +
Sbjct: 278 KHGQPTVTEVKTAMIVLRAGNSLQLQEAEARAQDIQQALQSGTRFSELARSYSQDPRTA- 336
Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALK 285
+ G+ ++ L + LL ++P + + +R E +
Sbjct: 337 -ANGGEMGWVAPGQLPDSLERTLLTLQPGGVSSPIRVGNAIYILHSQAQRQQAVEEKQIM 395
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A Q + + E+ +++R A +
Sbjct: 396 AAARMQLYNRIVHERMDEWQRRIRDGAYVE 425
>gi|304311712|ref|YP_003811310.1| Peptidyl-prolyl cis-trans isomerase [gamma proteobacterium HdN1]
gi|301797445|emb|CBL45665.1| Peptidyl-prolyl cis-trans isomerase [gamma proteobacterium HdN1]
Length = 439
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 94/253 (37%), Gaps = 13/253 (5%)
Query: 50 VITDGDISKRIALLKLQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+I ++ R +++Q +L+ ++ +I E+ + Q EK G+ D N
Sbjct: 48 IILQSELLNRTRQIRIQIAKRGTEAPDEAKLQAQVLERMITESAELQLAEKMGVRVDDNA 107
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+N AR LS E F + ++ +G+ +++ + + + + + +
Sbjct: 108 INEALANIARQNNLSLEQFQNVIEHEEGMTFASYREQVRREMTAHQLQQRRVASRIKISD 167
Query: 161 MEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+I A K +Y + +L ++ D+ K + D +L+ D
Sbjct: 168 QDIDAFLASDLGKENLAPDYHLGHILIAVHDDSDAASIDQAKAMADEVYRQLKSGADFAA 227
Query: 219 -LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
+++ + G + L F +++ + + + P + G I I + R
Sbjct: 228 TAVRYSGDDKALEGGDLGWRKAGQLPTLFADVVVNMHRGDISAPIRSPSGFHIIKILETR 287
Query: 277 DLGGEIALKAYLS 289
+ +A +
Sbjct: 288 GGTEMLVPQAQVR 300
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + V + +R +L + + AE+ R RL ++ A
Sbjct: 284 LETRGGTEMLVPQAQVRHILIKPNEIRSDADAH-----ALAEDIRRRLQQNKGDFAALAK 338
Query: 225 KIHDVSI-----GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278
D + G ++ + P+F+ ++ + + P+ TQ G + + ++R
Sbjct: 339 TYSDDTGSALEGGSLGWVNPGVMVPEFEKVMNSEKIGTISQPFRTQFGWHILEVTERRKQ 398
Query: 279 GGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315
K + Q K ++ A +++++R +A +
Sbjct: 399 DMTSEFKRNRARQMLFKRKFDEDLATWLREVRQDAYVE 436
>gi|300821942|ref|ZP_07102086.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7]
gi|300905457|ref|ZP_07123223.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1]
gi|300923997|ref|ZP_07139998.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1]
gi|301305055|ref|ZP_07211156.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1]
gi|301330176|ref|ZP_07222838.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1]
gi|331666290|ref|ZP_08367171.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA271]
gi|331680626|ref|ZP_08381285.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli H591]
gi|300402673|gb|EFJ86211.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1]
gi|300419766|gb|EFK03077.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1]
gi|300525542|gb|EFK46611.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7]
gi|300839662|gb|EFK67422.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1]
gi|300843816|gb|EFK71576.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1]
gi|315255671|gb|EFU35639.1| PPIC-type PPIASE domain protein [Escherichia coli MS 85-1]
gi|331066501|gb|EGI38378.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA271]
gi|331072089|gb|EGI43425.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli H591]
Length = 428
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|171317315|ref|ZP_02906511.1| SurA domain [Burkholderia ambifaria MEX-5]
gi|171097514|gb|EDT42352.1| SurA domain [Burkholderia ambifaria MEX-5]
Length = 452
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 115/300 (38%), Gaps = 22/300 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE------LEKIAVQELIVETL 85
+ ++ + +N +VIT ++ +R+ L+ +LQ+ N L + ++++E +
Sbjct: 34 RGAQLADEVVAVVNNDVITGRELDQRVGLIARRLQQQNAPVPPADQLRAQVLNQMVLERI 93
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ + GI D TV + A+ G++ E + + L+ QG+ + F + +
Sbjct: 94 QVQKAKDDGIRIDDATVQSTLQRLAQANGMTLEQYRARLEAQGVPWSVFTSDARTELMLS 153
Query: 146 DVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + K + E+ A+++ ++ + + P N Q + V ++
Sbjct: 154 KLREREVDGKITVSDAEVVNYIASQRGPSASQQQDLRFQHIFIKAPTNAPQAEIEVAQKK 213
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+A + D KL K S+ +D G + L + + K
Sbjct: 214 AEALLQQATSGADFEKLAKNNSEANDAKKGGDLGFKAPGALPAEVVDAASKLRPGQVNPT 273
Query: 261 -YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E + + D+R G A ++ + K E + ++ +R
Sbjct: 274 LIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGKSEGQARQQLQDIRRQ 333
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SKLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGTSAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
G +++++D ++ D K + S+ S G ++ + P+F+ + Q
Sbjct: 321 GQARQQLQDIR-RQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQ 379
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+ P T+ G I + D+R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 380 DGQISQPVRTEYGYHLIQVIDRREAEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSS 439
Query: 313 IIHY 316
+ Y
Sbjct: 440 YVQY 443
>gi|118581988|ref|YP_903238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter
propionicus DSM 2379]
gi|118504698|gb|ABL01181.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter
propionicus DSM 2379]
Length = 321
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/291 (16%), Positives = 103/291 (35%), Gaps = 16/291 (5%)
Query: 41 RIRTTINGEVITDGDISKRIA-LLKLQKINGE--------LEKIAVQELIVETLKKQEIE 91
+ +N E+IT +++ L++ + G + + A+ L+ + L +Q+I+
Sbjct: 23 AVAAIVNDEIITLYEVNHEAQPLIREGEKKGSMNDEERKRIRRAALDGLVEKKLVEQKIK 82
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I + +N R L E L QG+ + +K L Q +V +
Sbjct: 83 ELNIKIGDDEINQAIDDVKRQNNLDQEGLVKALASQGLSYDQYKSQLREQLERLRLVSME 142
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E E+ A N+ + R + F + + +
Sbjct: 143 VRSRIQVGESEVRAYYNENLATYSEDETFRARHIFFKTNEKAPAEEIKRTMNTALMVLAE 202
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266
+ KD +L + S+ G + D+ P+ Q +L Q + T G
Sbjct: 203 AKSGKDFAELARTYSEDPAAKKDGGDLGSFKKGDMQPELEQAILGMKQGEVSELVYTPLG 262
Query: 267 VEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + + ++K+ + K E+ ++ ++R+ A I
Sbjct: 263 FHLIKLEARTPGTPKPLESVKSEIEETIYRKKSEERFKKWATEMRAKASIE 313
>gi|331650947|ref|ZP_08351975.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli M718]
gi|331051401|gb|EGI23450.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli M718]
Length = 428
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAVPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|254787082|ref|YP_003074511.1| chaperone SurA precursor [Teredinibacter turnerae T7901]
gi|237683982|gb|ACR11246.1| chaperone SurA precursor [Teredinibacter turnerae T7901]
Length = 428
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 105/289 (36%), Gaps = 12/289 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+ + + + + + SY M R+ ++ VIT ++ RIA + +
Sbjct: 1 MTSIFVSVLAVFALALSLPSYSQPQMLDRVVVIVDKSVITQSELDSRIANITQRAAQAGM 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L+K + +LI ETL+ ++ GI +N + G E F+ +
Sbjct: 61 RLPGRDVLQKQVLDQLISETLQLNMAKRYGIEISDADLNGAIQNIKASRGWDDETFAREI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
+ + F++ L + V + + E EI + +Y +
Sbjct: 121 HAEAANMHEFRENLRREITLQQVSQGVVRGRIRISEQEISNFLKSADAQFWISPDYRLGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+L +P + Q ++ +A +L + ++ +S + G + +D
Sbjct: 181 ILIPLPPAPSKEQTEAAEKRAEAIYQQLVNGANFGEMAIAESSGPSALKGGDLGFRKSAD 240
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
L F + + + + P +Q G + + DKR ++ +A +
Sbjct: 241 LPTLFAEIAPTLEVGDVSKPARSQAGFHILKLMDKRGETKQVVSQAKVR 289
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K+ V + +R +L + + + +++ E ++ D +L K S+
Sbjct: 274 DKRGETKQVVSQAKVRHILLK--PSAILPSDKARAKLEQMREQIIKGEADFAELAKDNSE 331
Query: 226 IHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GE 281
S G + +F ++ ++ + P+ TQ G + + D+R E
Sbjct: 332 DIGSKMSGGDLGWAEPDTFVGEFAQTIRDTKIGEISEPFQTQFGWHILEVLDRRQEDLTE 391
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A++A T + E +++++R +A I
Sbjct: 392 EAIRAKARQVLTSRRFEDETQVWLQEMRDDAFIE 425
>gi|237729350|ref|ZP_04559831.1| peptidyl-prolyl cis-trans isomerase SurA [Citrobacter sp. 30_2]
gi|226909079|gb|EEH94997.1| peptidyl-prolyl cis-trans isomerase SurA [Citrobacter sp. 30_2]
Length = 428
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 97/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L + G+ +
Sbjct: 67 RHQILERLIMDQILLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAQDGLSYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + +V N+ + L E+ A Q +N E + +L +P+N
Sbjct: 127 TYRSQIRKEMTISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + R D KL S G+ + +L F
Sbjct: 187 PTSDQVNAAESQARSVVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIIGPIRSGVGFHILKVNDMR 274
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/312 (11%), Positives = 92/312 (29%), Gaps = 59/312 (18%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--- 113
R L + +E+ + ++ E+ + +T V+ Q
Sbjct: 113 QMRSRLAQDGLSYSTYRSQIRKEMTISEVRNNEVRRR-VTILPQEVDALAQQVGNQNDAS 171
Query: 114 --------------GLSAEDFSSFLDKQ----------------GIGDNHFKQYLAI-QS 142
+++ ++ + I + +Q L Q
Sbjct: 172 TELNLSHILIPLPENPTSDQVNAAESQARSVVDEARNGSDFGKLAITYSADQQALKGGQM 231
Query: 143 IWPDVVK------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
W + + G +++ + + ++I+V E R +L
Sbjct: 232 GWGRIQELPGIFAQALSTAKKGDIIGPIRSGVGFHILKVNDMRGQSQSISVTEVHARHIL 291
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + +++ K S+ + G +
Sbjct: 292 LK--PSPIMTDQQARLKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWAAADIF 349
Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKH 300
P F++ L K ++ + P + G I + D R++ A + + + K +
Sbjct: 350 DPAFRDALTKLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEE 409
Query: 301 EAEYVKKLRSNA 312
A ++++ R++A
Sbjct: 410 AATWMQEQRASA 421
>gi|300816090|ref|ZP_07096313.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1]
gi|300531297|gb|EFK52359.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1]
Length = 428
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 L-KKSQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSAAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 SAAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|221135224|ref|ZP_03561527.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola sp.
HTCC2999]
Length = 431
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 102/274 (37%), Gaps = 14/274 (5%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKINGE--- 71
+ ++I C+ VS + A + ++ ++ VI + +I++ IA +K
Sbjct: 1 MKFLGILIGCLWLSVSVSAMAQTELDKVSVIVDQGVILESEINELIATVKESAKKNNQSL 60
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L A++ LI++ L+ Q E+ GI + A+N + + + + +
Sbjct: 61 PSDRALRTQAIERLILDNLQMQMAERMGIQVSDPQLEQTIANIAKNQNSTMDQLRAGIAQ 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVL 184
G+ + +++ + + I +V + + + EI + + + EY + +L
Sbjct: 121 AGLDYDSYRETVRKELITGEVRRANVRRRIYITPQEISSLVALIEEQGNEQAEYRLGHIL 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLH 243
P + + + L D K +S + G +L + +
Sbjct: 181 IGFPPEPTDADITSARERAEKVLNLLNSGSDFAKIAIASSSGPKALDGGDMGWLNINSMP 240
Query: 244 PQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F +++ K + P + G + I + R
Sbjct: 241 TLFAEVVQGKEADELIGPIRSGAGFHILKIQETR 274
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ ++ + E R +L + + + ++ V+ +++ + L D L K S
Sbjct: 271 QETRGIEVAKLEEINARHIL--VKPSIILSEQKVETMLQEFKAQVLEGTADFADLAKAHS 328
Query: 225 KIHDVSI--GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGG 280
+ ++ G+ + S P F++ L+K ++ + P + G I + D+R D
Sbjct: 329 EDPGSAVKGGELGFADPSLYVPAFKDALVKLEKDEISEPIRSVHGWHLIQLIDRRVDDIT 388
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K + +++++R A I
Sbjct: 389 DRKKQDKAYQLIFNRKFAEETDAWLREMREEAFIE 423
>gi|311280964|ref|YP_003943195.1| SurA domain-containing protein [Enterobacter cloacae SCF1]
gi|308750159|gb|ADO49911.1| SurA domain protein [Enterobacter cloacae SCF1]
Length = 428
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ +V S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDNTL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKVSDEQLDQAIASIAKQNNMTMDQMRSRLANDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRSQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQMGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + + R D KL S G+ + +L F
Sbjct: 187 PTSDQVSEAEAQARSVVEQARGGADFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G I + D R
Sbjct: 247 LSTAKKGDIIGPIRSGVGFHVIKVNDLR 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 92/296 (31%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+I+ ++ E+ + IT V+ Q
Sbjct: 129 RSQIRKEMIISEVRNNEVRRR-ITVLPQEVDALAKQMGNQNDASTELNLSHILIPLPENP 187
Query: 116 SAEDFSSFLDKQ----------------GIGDNHFKQYLAI-QSIWPDVVK--------- 149
+++ S + I + +Q L Q W + +
Sbjct: 188 TSDQVSEAEAQARSVVEQARGGADFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQAL 247
Query: 150 ---------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD--NKLQNQGFV 198
G +++ + + + I+V E R +L + Q + +
Sbjct: 248 STAKKGDIIGPIRSGVGFHVIKVNDLRGQSQTISVTEVHARHILLKPSPIMSDDQARAKL 307
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++ D + + K +L + + G + P F++ ++K S+
Sbjct: 308 EQVAADIKSGKTTFEKAAKELSQDPGSANQ--GGDLGWATPDIYDPSFRDAVMKLSKGQV 365
Query: 258 TNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ + A K K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIQLLDTRNVDRTDAAQKDKAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|301019757|ref|ZP_07183903.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1]
gi|331661424|ref|ZP_08362348.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA143]
gi|300399094|gb|EFJ82632.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1]
gi|331061339|gb|EGI33302.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Escherichia coli TA143]
Length = 428
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVSNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 90/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q + S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVSNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|283835117|ref|ZP_06354858.1| peptidylprolyl cis-trans isomerase SurA [Citrobacter youngae ATCC
29220]
gi|291069416|gb|EFE07525.1| peptidylprolyl cis-trans isomerase SurA [Citrobacter youngae ATCC
29220]
Length = 428
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 97/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L + G+ +
Sbjct: 67 RHQILERLIMDQILLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAQDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + +V N+ + L E+ A Q +N E + +L +P+N
Sbjct: 127 TYRSQIRKEMTISEVRNNEVRRRVTILPQEVDALAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + R D KL S G+ + +L F
Sbjct: 187 PTSDQVNAAESQARSVVDEARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIIGPIRSGVGFHILKVNDMR 274
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/312 (11%), Positives = 91/312 (29%), Gaps = 59/312 (18%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--- 113
R L + +E+ + ++ E+ + +T V+ Q
Sbjct: 113 QMRSRLAQDGLNYSTYRSQIRKEMTISEVRNNEVRRR-VTILPQEVDALAQQVGNQNDAS 171
Query: 114 --------------GLSAEDFSSFLDKQ----------------GIGDNHFKQYLAI-QS 142
+++ ++ + I + +Q L Q
Sbjct: 172 TELNLSHILIPLPENPTSDQVNAAESQARSVVDEARNGSDFGKLAITYSADQQALKGGQM 231
Query: 143 IWPDVVK------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
W + + G +++ + + ++I+V E R +L
Sbjct: 232 GWGRIQELPGIFAQALSTAKKGDIIGPIRSGVGFHILKVNDMRGQSQSISVTEVHARHIL 291
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + +++ K S+ + G +
Sbjct: 292 LK--PSPIMTDQQARLKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWAAADIF 349
Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKH 300
P F++ L K ++ + P + G I + D R + A + + + K +
Sbjct: 350 DPAFRDALTKLNKGQMSAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEE 409
Query: 301 EAEYVKKLRSNA 312
A ++++ R++A
Sbjct: 410 AATWMQEQRASA 421
>gi|197334077|ref|YP_002155047.1| chaperone SurA [Vibrio fischeri MJ11]
gi|197315567|gb|ACH65014.1| chaperone SurA [Vibrio fischeri MJ11]
Length = 437
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 94/255 (36%), Gaps = 12/255 (4%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQELIVETL 85
+ R+ ++ V+ DI + +K+ L + +++LIV+T+
Sbjct: 22 AAPVELDRVVAIVDEGVVLQSDIDTSLKTVKINAQEKGQPLPDEAVLREQVLEKLIVDTI 81
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ EK GI D + A+ ++ QG+ +F++ + +
Sbjct: 82 QSQQAEKMGIRIDDTRLEAALNDIAKENNMTLAQLQQKTAAQGLPYANFREQIRKEIAAS 141
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + L E+ + Q + T +Y I + + D Q ++
Sbjct: 142 EARNAQVRRRINILPQEVESLAQLLAEETQATVQYKISHIQLRVEDGATQTDKEALEKQA 201
Query: 204 DAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPY 261
+ RL+ D + ++ + G ++ + ++ F + + + +N+ P+
Sbjct: 202 EDLTERLKQGADFATMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQITGQGKNSIIGPF 261
Query: 262 VTQKGVEYIAICDKR 276
+ G + I D +
Sbjct: 262 RSGVGFHILKIDDVK 276
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 57/151 (37%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ + V E R +L + + + Q+ + + + + + S+
Sbjct: 277 GLETVAVTEVNARHILIKT--SVIMSDEGAQRLLNTIIDDIKSGKETFADMAQRYSQDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + P+F++ ++ + P+ T G + ++R + + A+
Sbjct: 335 SAANDGELGFQTPDLYVPEFKHQVETLPVGQISAPFKTVHGWHIAEVLERRQVDRTDAAM 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + +++++R++A +
Sbjct: 395 KNKAYRILLNRKFNEEAGAWLQEIRASAYVE 425
>gi|283783842|ref|YP_003363707.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase)
[Citrobacter rodentium ICC168]
gi|282947296|emb|CBG86841.1| chaperone precursor (peptidyl-prolyl cis-trans isomerase)
[Citrobacter rodentium ICC168]
Length = 428
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNASQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ AR ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIARQNNMTLDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A Q +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRVTILPQEVEALAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+Q + + + R D KL +++ + G+ + +L F
Sbjct: 187 PTSDQVSEAEAQARSIVDQARSGSDFGKLAIAYSADQQALKGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDVVGPIRSGVGFHILKVNDMR 274
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + +T V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-VTILPQEVEALAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
S +D+ G + K +A Q W +
Sbjct: 188 TSDQVSEAEAQARSIVDQARSGSDFGKLAIAYSADQQALKGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V G +++ + + ++I+V E R +L + + ++
Sbjct: 248 STAKKGDVVGPIRSGVGFHILKVNDMRGQNQSISVTEVHARHILLK--PSPIMTDQQARQ 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWAAADIFDPAFRDALTRMNKGQI 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRSVDKTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASA 421
>gi|158521718|ref|YP_001529588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus
oleovorans Hxd3]
gi|158510544|gb|ABW67511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus
oleovorans Hxd3]
Length = 316
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 113/309 (36%), Gaps = 18/309 (5%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL----LKLQKINGE-------- 71
+ + + RI +N E+I ++ K +AL ++ +++ +
Sbjct: 4 AGTLTSCRADTEAEVVDRIVAFVNQEIILLSELEKAMALYETAIRERQLPADTEKEMLYR 63
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + LI L +Q ++ G+T D V+ + R+ + ED L ++G
Sbjct: 64 ARQEMIDHLIDRRLIQQRADELGVTVDDREVDDAMERMKRSMLFTDEDLRQSLAEKGYTL 123
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPD 189
++ L Q + V+ + K ++I A + R+Y +R ++ +
Sbjct: 124 EGYRNELREQILRQRVLTLEVKSKVVVTPVDIQAYYETHPEEYSAGRQYHLRNIIMRVDK 183
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ + RL+ + +++ G + DL PQ +
Sbjct: 184 DMPDESKKTISEMMQKIHDRLQAGESFETLASQYSQSSFAEKGGDLGFFALEDLAPQLRE 243
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYV 305
+++ Q T T G + + + + ++ KA + + +E+ ++V
Sbjct: 244 AIEELQAGEFTPVLDTPLGYQILYLEEIQEKPAVSLEKATDEIREKLYEDLLEERFEKWV 303
Query: 306 KKLRSNAII 314
+LR + I
Sbjct: 304 TELREKSHI 312
>gi|320172859|gb|EFW48091.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella dysenteriae CDC
74-1112]
Length = 428
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V ++ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNHEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNHEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|260596477|ref|YP_003209048.1| peptidyl-prolyl cis-trans isomerase SurA [Cronobacter turicensis
z3032]
gi|260215654|emb|CBA27953.1| Chaperone surA [Cronobacter turicensis z3032]
Length = 440
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 114/310 (36%), Gaps = 18/310 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72
+L+ +V S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 19 LLLGITLVVNTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNANQAGQQLPDDSTL 78
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ + ++ A+ ++ + S L G+ N
Sbjct: 79 RHQILERLIMDQIMLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 138
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + E+E A + +N E + +L +P+N
Sbjct: 139 TYRAQIRKEMIISEVRNNEVRRRVTILPQEVETLAEQVGNQNDASTELNLSHILIPLPEN 198
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + + R D KL S G+ + +L F
Sbjct: 199 PTADQVSEAETQARSIIDQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSVFAQA 258
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
L + + P + G I + D R + ++ + +P ++ +
Sbjct: 259 LSTAKKGDVIGPIRSGVGFHIIKVNDLRGQSQTVSVTEVHARHILLKPSPIMTDQQARQK 318
Query: 305 VKKLRSNAII 314
++++ A I
Sbjct: 319 LEEI--AADI 326
Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 88/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+I+ ++ E+ + +T V Q
Sbjct: 141 RAQIRKEMIISEVRNNEVRRR-VTILPQEVETLAEQVGNQNDASTELNLSHILIPLPENP 199
Query: 116 SAEDFSSFLDKQ----------------GIGDNHFKQYLAI-QSIWPDV----------- 147
+A+ S + I + +Q L Q W +
Sbjct: 200 TADQVSEAETQARSIIDQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSVFAQAL 259
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V G +++ + + + ++V E R +L + + ++
Sbjct: 260 STAKKGDVIGPIRSGVGFHIIKVNDLRGQSQTVSVTEVHARHILLK--PSPIMTDQQARQ 317
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++++ + + S+ + G + P F++ L+ S+
Sbjct: 318 KLEEIAADIKSGKTTFAQAAREFSQDPGSANQGGDLGWAAADIYDPAFRDALMNLSKGQM 377
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R A + + + K + A ++++ R++A
Sbjct: 378 STPVHSSFGWHLIELLDTRKSDRTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASA 433
>gi|156935427|ref|YP_001439343.1| peptidyl-prolyl cis-trans isomerase SurA [Cronobacter sakazakii
ATCC BAA-894]
gi|156533681|gb|ABU78507.1| hypothetical protein ESA_03285 [Cronobacter sakazakii ATCC BAA-894]
Length = 428
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GEL 72
+L+ +V S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGITLVVNTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNANQAGQQLPDDSTL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQILERLIMDQIMLQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + E+E A + +N E + +L +P+N
Sbjct: 127 TYRAQIRKEMIISEVRNNEVRRRVTILPQEVETLAEQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + + R D KL S G+ + +L F
Sbjct: 187 PTADQVSEAEAQARSIIDQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSVFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G I + D R
Sbjct: 247 LSTAKKGDVIGPIRSGVGFHIIKVNDLR 274
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 88/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+I+ ++ E+ + +T V Q
Sbjct: 129 RAQIRKEMIISEVRNNEVRRR-VTILPQEVETLAEQVGNQNDASTELNLSHILIPLPENP 187
Query: 116 SAEDFSSFLDKQ----------------GIGDNHFKQYLAI-QSIWPDV----------- 147
+A+ S + I + +Q L Q W +
Sbjct: 188 TADQVSEAEAQARSIIDQARNGGDFGKLAITYSADQQALKGGQMGWGRIQELPSVFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V G +++ + + + ++V E R +L + + ++
Sbjct: 248 STAKKGDVIGPIRSGVGFHIIKVNDLRGQSQTVSVTEVHARHILLK--PSPIMTDQQARQ 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++++ + + S+ + G + P F++ L+ S+
Sbjct: 306 KLEEIAADIKSGKTTFAQAAREFSQDPGSANQGGDLGWAAADVYDPAFRDALMSLSKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R A + + + K + A ++++ R++A
Sbjct: 366 STPVHSSFGWHLIELLDTRKSDRTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASA 421
>gi|209519024|ref|ZP_03267832.1| SurA domain protein [Burkholderia sp. H160]
gi|209500536|gb|EEA00584.1| SurA domain protein [Burkholderia sp. H160]
Length = 478
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 116/303 (38%), Gaps = 24/303 (7%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFC-IVPIVSYKSWA--------MSSRIRTTINGEVITDGD 55
VF ++ ++L T L+ +P+ S ++ A I +N VIT +
Sbjct: 22 VFVAIMKQLRLATLAAGLVAAASFLPVASVQAQALGGNGGGQTVDTIAAVVNNGVITQRE 81
Query: 56 ISKRIALL--KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ +R L+ +L + N L + + ++++E ++ Q+ ++ GIT D V
Sbjct: 82 LDERAGLIAHRLNQQNAPVPPMDQLRQQVLTQMVLERIQLQKAKEDGITIDDTAVERTLE 141
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--- 164
+ A+ ++ + + ++ QG+ F + + + + K + E+
Sbjct: 142 RLAQANNMTLAMYRARIEAQGVPWTTFTNDARTELTLSRLREKEVDSKITVTDAEVANYI 201
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A+++ + ++ + P N + ++ + + + D KL K S
Sbjct: 202 ASQRGPGAGQTNDLHMQHIFVKAPLNAPETDIEAAQKKAEGLLAEAKGGADFEKLAKNNS 261
Query: 225 KIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
+ D S G +L S L P+F + T G E + + ++R G
Sbjct: 262 QAPDASKNGGDLGFLAPSKLPPEFVKAASGLRPGEINPDLIRTNDGFEIVRLVERRAGQG 321
Query: 281 EIA 283
+
Sbjct: 322 NSS 324
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 81/219 (36%), Gaps = 11/219 (5%)
Query: 106 FVQHARNTGLSAEDFSS-----FLDKQGIGDNHFKQY--LAIQSIWPDVVKNDFMLKYGN 158
F + A+N + + + FL + K L I PD+++ + +
Sbjct: 253 FEKLAKNNSQAPDASKNGGDLGFLAPSKLPPEFVKAASGLRPGEINPDLIRTNDGFEIVR 312
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
L + + +R +L + ++ ++++ D +
Sbjct: 313 LVERRAGQGNSSDAPKLVQTHVRHILLRV--GDGLSEPQARQKLLDIRSQIAAGGEFEKF 370
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
++ G ++ + P+F+ + Q N ++P ++ G I + +RD
Sbjct: 371 ARTYSQDGSSSQGGDLGWISPGETVPEFERAMNSLQDNQISDPVRSEYGYHLIQVLGRRD 430
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G IA + L+ Q K E+ A+++++LR A +
Sbjct: 431 AEGSIAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 469
>gi|320642095|gb|EFX11446.1| peptidyl-prolyl cis-trans isomerase SurA [Escherichia coli O157:H7
str. G5101]
Length = 428
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I + N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEARNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ + E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEARNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|59710895|ref|YP_203671.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Vibrio fischeri
ES114]
gi|75507097|sp|Q5E863|SURA_VIBF1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|59478996|gb|AAW84783.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Vibrio fischeri
ES114]
Length = 437
Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 94/255 (36%), Gaps = 12/255 (4%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQELIVETL 85
+ R+ ++ V+ DI + +K+ L + +++LIV+T+
Sbjct: 22 AAPVELDRVVAIVDEGVVLQSDIDTSLKTVKINAQEKGQPLPDEAVLREQVLEKLIVDTI 81
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ EK GI D + A+ ++ QG+ +F++ + +
Sbjct: 82 QSQQAEKMGIRIDDTRLEAALNDIAKENNMTLAQLQQKTAAQGLPYANFREQIRKEIAAS 141
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + L E+ + Q + T +Y I + + D Q ++
Sbjct: 142 EARNAQVRRRINILPQEVESLAQLLAEETQATVQYKISHIQLRVEDGATQADKEALEKQA 201
Query: 204 DAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPY 261
+ RL+ D + ++ + G ++ + ++ F + + + +N+ P+
Sbjct: 202 EDLTERLKQGADFATMAYTYSKGPKALQGGDWGWMRKEEMPTIFADQITGQGKNSIIGPF 261
Query: 262 VTQKGVEYIAICDKR 276
+ G + I D +
Sbjct: 262 RSGVGFHILKIDDVK 276
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 57/151 (37%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ + V E R +L + + + Q+ + + + + + S+
Sbjct: 277 GLETVAVTEVNARHILIKT--SVIMSDEGAQRLLNTIIDDIKSGKETFADMAQRYSQDPG 334
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + P+F++ ++ + P+ T G + ++R + + A+
Sbjct: 335 SAANDGELGFQTPDLYVPEFKHQVETLPVGQISAPFKTVHGWHIAEVLERRQVDRTDAAM 394
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + +++++R++A +
Sbjct: 395 KNKAYRILLNRKFNEEAGAWLQEIRASAYVE 425
>gi|197116616|ref|YP_002137043.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter
bemidjiensis Bem]
gi|197085976|gb|ACH37247.1| peptidylprolyl cis-trans isomerase, PpiC-type, SurA family
[Geobacter bemidjiensis Bem]
Length = 317
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 103/297 (34%), Gaps = 17/297 (5%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETL 85
+ S I +N E+IT ++ K L++QK L A+ L+ L
Sbjct: 21 STAKQVSGIAAIVNDEIITTQELDK--EYLQIQKDADKVPGSDKSGLRGAALNRLVERKL 78
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+Q+I + I V + L+ E+ L QG+ ++ L Q
Sbjct: 79 IEQKIRELNINVSDEEVRLAIEDVKKQNNLTQENLEQALVTQGLTLAQYRTQLKEQMERL 138
Query: 146 DVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + K E E+ Y R + F + + +
Sbjct: 139 RLMSQEVRSKVQVGEREMREYYQANIAAYGGSEVYSARHIFFKVDKKGGAGELSKAETRA 198
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+ ++ R +D L K S + G ++D+ P+ + + ++
Sbjct: 199 NEVLAKARAGEDFAALAKKYSDDPAAAKDGGDLGTFKKADMLPEIGDTVSAMKPGEVSSI 258
Query: 261 YVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ G+ I + K+ G +K + K ++ A++VK+LR+ A I
Sbjct: 259 VRSPAGLHIIKLEGKKQDAGRPFEQVKDSIEDTLYKKKSDERFAQWVKELRAGAAIE 315
>gi|241662025|ref|YP_002980385.1| SurA domain-containing protein [Ralstonia pickettii 12D]
gi|240864052|gb|ACS61713.1| SurA domain protein [Ralstonia pickettii 12D]
Length = 500
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 48/293 (16%), Positives = 101/293 (34%), Gaps = 21/293 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALL----KLQKINGELEK----IAVQELIVETLKKQEIE 91
+ +N +VIT ++ R L+ + Q +++LI+E ++ Q +
Sbjct: 92 DEVVAVVNTDVITRRELLNRADLVERTFRAQNRPLPPRADLLGEVLEQLILERVQAQTAK 151
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---- 147
+SGI V+ A+ LS S L G+ + ++ L + + +
Sbjct: 152 ESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLKDAGMTYDKYRDDLRQEILLARLRERE 211
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V + + G ++ + ++Y + +L + + + ++ +
Sbjct: 212 VDSKVQVYDGEIDNYLAQQGGGTAPAGEQQYNVAQILVPVAEGATDAEKAAARKKAEGLL 271
Query: 208 SRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNT-TNPYVTQ 264
+ + D KL + S D + G+ L F N ++ + +
Sbjct: 272 KQAQGGADFAKLARDNSGAQDAAQGGELGLRPIGRLPAVFANAVVDMKAGQVASQVVESP 331
Query: 265 KGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + DKR G IA K ++ + PT + LR
Sbjct: 332 AGYHVIKLLDKRAPGTAIAAKVQQTQVRHILIKTGPTMSADDARRQLVGLRDR 384
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
V++ +R +L + ++++ + + + +++ +
Sbjct: 350 AAKVQQTQVRHILIKTGPTMSADDA--RRQLVGLRDRIVHGYDFGDAARRYSQDGSAGAG 407
Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYL 288
G+ ++ L P+F+ + + + + P +Q GV I + +R ++ G+ + Y
Sbjct: 408 GELGWVSPGQLVPEFEQAMNQLKPGDVSQPVQSQFGVHLIQVEGRREAEVSGDR-QRDYA 466
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K++ +++++LR +A + Y
Sbjct: 467 RSVIREQKVQAAYEDWLRELRDSAHVEY 494
>gi|323157883|gb|EFZ43986.1| chaperone surA [Escherichia coli EPECa14]
Length = 356
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
>gi|300939470|ref|ZP_07154132.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1]
gi|300455691|gb|EFK19184.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1]
Length = 428
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARTIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARTIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|145640428|ref|ZP_01796012.1| stationary-phase survival protein SurA [Haemophilus influenzae
R3021]
gi|145275014|gb|EDK14876.1| stationary-phase survival protein SurA [Haemophilus influenzae
22.4-21]
Length = 162
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
++ K + + +EY +R +L + N L N +K++ +
Sbjct: 1 MLKEAKEKGTAQKVMGKEYEVRHILLKL--NPLLNDAQAKKQLAKIRSDIIAGKTTFADA 58
Query: 220 EKFASK--IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
SK + + G Y PQF Q ++K Q + P+ T+ G + + R
Sbjct: 59 ALKYSKDYLSGANGGSLGYAFPETYAPQFAQTVVKSKQGVISAPFKTEFGWHILEVTGVR 118
Query: 277 DLGGEIALKAYLS---AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
D G++ +AY + T+++ ++VK LR A I Y+
Sbjct: 119 D--GDLTAEAYTQKAYERLVNTQLQDATNDWVKALRKRANIQYF 160
>gi|82775458|ref|YP_401805.1| peptidyl-prolyl cis-trans isomerase SurA [Shigella dysenteriae
Sd197]
gi|309787287|ref|ZP_07681899.1| chaperone surA [Shigella dysenteriae 1617]
gi|121956480|sp|Q32K41|SURA_SHIDS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|81239606|gb|ABB60316.1| survival protein [Shigella dysenteriae Sd197]
gi|308924865|gb|EFP70360.1| chaperone surA [Shigella dysenteriae 1617]
Length = 428
Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLNQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|39995126|ref|NP_951077.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Geobacter sulfurreducens PCA]
gi|39981888|gb|AAR33350.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA]
gi|298504156|gb|ADI82879.1| peptidylprolyl cis-trans isomerase, PpiC-type, SurA family
[Geobacter sulfurreducens KN400]
Length = 321
Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats.
Identities = 64/319 (20%), Positives = 115/319 (36%), Gaps = 19/319 (5%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKIN--- 69
++ L + ++ + S S + SRI +N E++T D KR L + ++
Sbjct: 1 MIKRLIPLSLAVVLTLPSLSSAEVVSRILAVVNDEIVTSYAVDKEKRALLKEAERQQPPP 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L+++A+ LI + L +Q+I + I V R LS E + L
Sbjct: 61 DPKSLANLDEVALNRLIDKKLVEQKIRELDIRVGEEEVRQAIEDVKRQNKLSQEALVAAL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
QG+ + +K + Q +V + K E E+ K K + R
Sbjct: 121 ANQGLSFDQYKAQIKEQLERLRLVSQEVRSKIQVGEREMREYYEANKAKFGAEDIFRARN 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLES 240
+ F + D Q + KD +L + S + G +
Sbjct: 181 IYFKLDDKMSAEQVKKVMTTAMTVLHEAQSGKDFAELARQYSDDPAAKGNGGDLGTFRKG 240
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTK 296
D+ P+F+ L + ++ T G+ + + ++R LG KA + K
Sbjct: 241 DILPEFEEQLTRMQPGEVSDLIYTATGLHIVKL-EERSLGTPKPFEQVKAEVEDLVYRKK 299
Query: 297 IEKHEAEYVKKLRSNAIIH 315
E ++V LR A I
Sbjct: 300 SEDRFNQWVADLRKGAAIE 318
>gi|323964847|gb|EGB60314.1| ppic-type ppiase domain-containing protein [Escherichia coli M863]
gi|327255033|gb|EGE66636.1| chaperone surA [Escherichia coli STEC_7v]
Length = 428
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 98/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKIN-----GEL 72
+L+ ++ S+ + + ++ +N V+ + D+ + + L Q L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ N
Sbjct: 67 RHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + + E + +L +P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQYDASTELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
+Q + A + R D KL S + G+ + +L F
Sbjct: 187 PTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQA 246
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 247 LSTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 129 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQYDASTELNLSHILIPLPENP 187
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 188 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 248 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 306 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 366 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 421
>gi|71281900|ref|YP_271172.1| peptidyl-prolyl cis-trans isomerase SurA [Colwellia psychrerythraea
34H]
gi|122070643|sp|Q47VK0|SURA_COLP3 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|71147640|gb|AAZ28113.1| peptidyl-prolyl cis-trans isomerase SurA [Colwellia psychrerythraea
34H]
Length = 433
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 96/275 (34%), Gaps = 13/275 (4%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
+ + I I S ++ + R+ +N V+ + +++ + +K Q
Sbjct: 4 RIKALLLASSLIITTITSVQAKEELLDRVAAIVNTGVVLESEVNDLLVNIKQQAKKNNQS 63
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L + +LI ++L Q ++ GI ++ AR L+ F +
Sbjct: 64 LPSDKALRIQVMDKLINDSLLSQMGQRMGIQISDAQLDQTLNNMAREDKLTLAQFRQQVI 123
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTV 183
+G +++ + I+ + +V +N + E+ K ++ EY + +
Sbjct: 124 DEGTSYEKYRENVRIELVSGEVSRNSVRRRIFVSPQEVDNLLKVMKEQSSNNVEYHLGHI 183
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDL 242
L P + Q K L D K+ +S + G + +++
Sbjct: 184 LIEFPADASQEDLAAAKTRATKVVELLNDGSDFAKIAITSSGDANALKGGDLGWKNINEM 243
Query: 243 HPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
F L+ K ++ P T G + + D R
Sbjct: 244 PTLFSELINDKPKDTIVGPIRTGLGYSIVKVLDIR 278
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 45/152 (29%), Gaps = 3/152 (1%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ K + V E +L P L ++ + ++ +
Sbjct: 278 RGRKVVEVEEVKASHILIK-PSIILSDEKAKSLLQGFLNQIDAGEATFEELAKEHSEGPT 336
Query: 228 DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
V G + + P F L + P+ + G I + D+R + L
Sbjct: 337 SVRGGDLGWADPKNYDPAFTEALATMKKGGYHKPFRSSFGWHIIKLEDRRMVDATSQLNE 396
Query: 287 YLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K ++K+ R A I +
Sbjct: 397 NRAYQILFNRKYGMESTRWLKETRDEAYIEIF 428
>gi|262198047|ref|YP_003269256.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum
DSM 14365]
gi|262081394|gb|ACY17363.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum
DSM 14365]
Length = 349
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 110/302 (36%), Gaps = 18/302 (5%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-----------QKINGELEKIAVQEL 80
+ ++ + R+ +N VI ++ R+A L + +L + E+
Sbjct: 45 ATRTALVLDRVAAVVNDSVILTSELDARLAPLTAGLANINDERERARRGEQLRSQQLDEM 104
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E L QE KS + D V+ + + GL ++ L +QG +++ +
Sbjct: 105 ISEELVVQEARKSKLNVDDKEVSAALAEIKQQNGLDDTQLAAALAQQGYSMQAYRKEVER 164
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM--KNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q + + + + ++ M ++ V + ++ L S+P N
Sbjct: 165 QLLHRRAINMLVRPRVTVTDEDVRVRYDTMSRRSAAVSKVRLKHALLSLPPNPSNELLAE 224
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLL-KKSQN 255
K A +R + + S + S G ++ + +++ ++ +
Sbjct: 225 AKSKAAAIVEAVRGGASFDDQARQYSDDINTRDSGGDLGWIERGSIATEWEVIVFSMEEG 284
Query: 256 NTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P G+ + K DL A+K L ++ +++K ++++LR A
Sbjct: 285 EVRGPVSGPGGLHVFYVEELAKSDLEEFDAVKEQLQSEIYREEMDKEITAWLQELRDKAF 344
Query: 314 IH 315
I
Sbjct: 345 ID 346
>gi|226946688|ref|YP_002801761.1| peptidyl-prolyl cis-trans isomerase SurA [Azotobacter vinelandii
DJ]
gi|226721615|gb|ACO80786.1| Peptidyl-prolyl cis-trans isomerase SurA [Azotobacter vinelandii
DJ]
Length = 432
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 92/253 (36%), Gaps = 12/253 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELE--------KIAVQELIVETLKKQEIE 91
RI I+ +V+ + +R+ ++ + ++ LI+E+++ Q
Sbjct: 33 DRIVAIIDNDVVMQTQLDRRLREVEQTIAKRGAQLPPRDQLVSQVLERLILESIQLQMGS 92
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
++GI + A+ GL+ E F + L + G+ + ++ + + I V +
Sbjct: 93 RAGIRIGDEELAQAMATIAQRNGLTLEQFQAALARDGLSFDEAREQVRREMIISRVRQRV 152
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + E+ K E+ + + +PD Q ++ +
Sbjct: 153 VADRIQISDHEVQNFLASDLGKLQLSEEFRLANITIPLPDGAPPEQIQAAEQQVLEIYRQ 212
Query: 210 LRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
L D +L ++ + G+ + + L P F NL+ + T P T G
Sbjct: 213 LSDGADFAQLAITRSAGETALEGGEIGWRRAAQLPPPFDNLVSQLPVGGVTEPVRTPGGY 272
Query: 268 EYIAICDKRDLGG 280
I + +KR
Sbjct: 273 IIIKLLEKRGGSA 285
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 59/155 (38%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
K+ E +R +L + + +R+ + R+ +D +L K S
Sbjct: 278 LEKRGGSAQIRDEVHVRHILIKPSEIRTDIDA---RRLIERIHERILNGEDFAELAKSFS 334
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ + G ++ + L P+F+ ++ K+ + P+ + G + + +R
Sbjct: 335 EDPGSALNGGDLNWIDPNALVPEFREMMAKTPAGELSPPFKSPFGWHVLEVLGRRATDSS 394
Query: 282 IALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
++ + K ++ +++++R A +
Sbjct: 395 TQVREQQAMNVLRNRKYDEELQSWLRQIRDEAYVE 429
>gi|187927495|ref|YP_001897982.1| SurA domain [Ralstonia pickettii 12J]
gi|309779803|ref|ZP_07674558.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Ralstonia sp. 5_7_47FAA]
gi|187724385|gb|ACD25550.1| SurA domain [Ralstonia pickettii 12J]
gi|308921380|gb|EFP67022.1| chaperone SurA (Peptidyl-prolyl cis-trans isomerase surA) (PPIase
surA) (Rotamase surA) [Ralstonia sp. 5_7_47FAA]
Length = 500
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 100/293 (34%), Gaps = 21/293 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALL----KLQKINGELEK----IAVQELIVETLKKQEIE 91
+ +N +VIT ++ R L+ + Q +++LI+E ++ Q +
Sbjct: 92 DEVVAVVNTDVITRRELLNRADLVERTFRAQNRPLPPRADLLGEVLEQLILERVQAQTAK 151
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---- 147
+SGI V+ A+ LS S L G+ + ++ L + + +
Sbjct: 152 ESGIRVSDADVDRAVESVAQRNNLSVPQLKSKLKDAGMTYDKYRDDLRQEILLARLRERE 211
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V + + G ++ + ++Y + +L + + + ++ +
Sbjct: 212 VDSKVQVYDGEIDNYLAQQGGGTAPAGEQQYNVAQILVPVAEGATDAEKAAARKKAEGLL 271
Query: 208 SRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNT-TNPYVTQ 264
+ + D KL + S D + G+ L F N ++ + +
Sbjct: 272 KQAQGGADFAKLARDNSGAQDAAQGGELGLRPIGRLPAVFANAVVDMKAGQVASQVVESP 331
Query: 265 KGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + +KR IA K ++ + PT + LR
Sbjct: 332 AGYHVIKLLEKRASSTAIAAKVQQTQVRHILIKTGPTMSADDARRQLVGLRDR 384
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
V++ +R +L + ++++ + + + +++ +
Sbjct: 350 AAKVQQTQVRHILIKTGPTMSADDA--RRQLVGLRDRIVHGYDFGDAARRYSQDGSAGAG 407
Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYL 288
G+ ++ L P+F+ + + + + P +Q GV I + +R ++ G+ + Y
Sbjct: 408 GELGWVSPGQLVPEFEQAMNQLKPGDVSQPVQSQFGVHLIQVEGRREAEVSGDR-ERDYA 466
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K++ +++++LR +A + Y
Sbjct: 467 RSVIREQKVQAAYEDWLRELRDSAHVEY 494
>gi|238028597|ref|YP_002912828.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia glumae BGR1]
gi|237877791|gb|ACR30124.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia glumae BGR1]
Length = 451
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 117/316 (37%), Gaps = 23/316 (7%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKING------ 70
+ + + + ++ + +N +VIT ++ +R+ L+ +L++
Sbjct: 19 SLLSVTPAVAQALGSNGATLADEVVAVVNNDVITGRELDQRVDLIARRLRQQKAPVPPID 78
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
EL + ++++E ++ Q+ ++ GI D V + A +S + + + L+ +G+
Sbjct: 79 ELRMQVLNQMVLERIQVQKAKEDGIVVDDAMVQATLQRLAAANNMSLDQYRARLEAEGVP 138
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSI 187
N F + + + + + K + E+ A+++ + ++ + + +
Sbjct: 139 WNIFVSDARTELMLSRLREKEVDSKITVSDAEVASYIASQRGPNAGSQQDLRLEHIFVAA 198
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQ 245
P N + Q ++ + + P D +L K S+ D S G + L
Sbjct: 199 PQNAPETQIDAARKKAEGLLKQALAPGADFERLAKNNSEAKDAKSGGDLGFKPPGSLPAD 258
Query: 246 -FQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPT 295
Q + + G E + + D+R G A ++ +
Sbjct: 259 VVQAVAQLRPGQVNPALIRVPDGFEIVRLVDRRPAQGTSAASPKIVQTHVRHILLRVGEG 318
Query: 296 KIEKHEAEYVKKLRSN 311
K E + + +R+
Sbjct: 319 KSEAQARQQLIDIRNK 334
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 75/183 (40%), Gaps = 6/183 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L PA + + + +R +L + + K ++
Sbjct: 264 AQLRPGQVNPALIRVPDGFEIVRLVDRRPAQGTSAASPKIVQTHVRHILLRVGEGK--SE 321
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ 254
++++ D ++ D + S+ S G ++ + P+F+ + Q
Sbjct: 322 AQARQQLIDIRN-KVEAGGDFASFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQ 380
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNA 312
+NP T+ G I + +RD G I + ++ Q K E+ A+++++LR ++
Sbjct: 381 DGQISNPVRTEYGYHLIQVLGRRDAEGSIQQQMDIARQAIGQRKAEQAYADWLRELRDSS 440
Query: 313 IIH 315
+
Sbjct: 441 YVQ 443
>gi|323143364|ref|ZP_08078052.1| PPIC-type PPIASE domain protein [Succinatimonas hippei YIT 12066]
gi|322416882|gb|EFY07528.1| PPIC-type PPIASE domain protein [Succinatimonas hippei YIT 12066]
Length = 457
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 92/279 (32%), Gaps = 12/279 (4%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-------KLQK 67
+ L + + I + +N ++I ++ + Q
Sbjct: 13 MFGKRIALALTAALGIAFNANAQTLDTTAAVVNNDIILTSELDAMQKEMAANFASRGQQV 72
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
K A+++LI ++L Q+ G+ + ++ Q A G+S + +
Sbjct: 73 SPVNARKAALEQLITKSLILQQARTHGLNLNDMQLDQALEQFAARNGVSVKTLLDQMGP- 131
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
G+ + ++ I +V +N + + E+ + +K + E Y + ++
Sbjct: 132 GLSEAAQRERFREDLIIGEVRRNQVRNRIKISDSEVKLLAKNLKQLGSVEPSYHLSQLIV 191
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLH- 243
+ N Q D ++ LR D N L + G Y+ ES +
Sbjct: 192 PLAANATSAQVQRAVNTVDKIKADLRKGADFNDLAALYTQGSLAAQGGDLGYIPESRVPV 251
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
P +LLK P + G+ I D +
Sbjct: 252 PFLPSLLKSKPGAVIGPIRSPYGLHLIKYVGVTDGAVKT 290
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 6/146 (4%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-- 231
T+ Y +L + + + + L+ + K S+ +I
Sbjct: 290 TITMYDASHILLTTSIVYPDETAVKE--LNLLRDEILKGAISFSDAAKNFSEDPGSAING 347
Query: 232 GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLS 289
G Y P F +++ + P + G I + D + DL + + +
Sbjct: 348 GDLGYATPDRYDPAFAAAMVRLKPGEISEPVRSSFGYHLIKLNDIKTDLDSDASYEDQAR 407
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + ++LR A IH
Sbjct: 408 NLIFERLFREESIAWERELRDTAYIH 433
>gi|256828792|ref|YP_003157520.1| SurA domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577968|gb|ACU89104.1| SurA domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 305
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/313 (19%), Positives = 117/313 (37%), Gaps = 21/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQK---- 67
+K VL + A RI +NGE+IT D+ ++I L Q
Sbjct: 1 MKKFGVRAVLTFSLFFVLAGLGQAAQLVDRIVAVVNGEIITFQDLQQQIRLSVGQTPDPA 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
++ + +I + + +QE ++ I + V+ Q LS EDF L Q
Sbjct: 61 TAEKIAPQVLDGMIDDVILRQEAQRLKIEVSDSEVDNEIRQFKARRRLSEEDFERTLRLQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ FK+ ++ K + EI A ++ ++ E ++ + +
Sbjct: 121 GLTPEQFKERSREDITKHKMLGYMVRRKVVVTQEEIDAYMEQNRSELTTERIVDVQMLVL 180
Query: 188 PDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
D + N + + EE+ R K + + + +L
Sbjct: 181 VDEERANSLWKSLSEGEVSLEEAVERYSIG--------PKAENGVMRDVSWR---ELAEP 229
Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEA 302
+++ L+ S + P++ Q + + D+RD + A++ + K+E+
Sbjct: 230 WRDGLRNLSAGELSKPFLVQDKWVILKLLDRRDGVRQEDAAVEEEVREAIMRPKLEERFK 289
Query: 303 EYVKKLRSNAIIH 315
EY+ LRS AII
Sbjct: 290 EYMNGLRSKAIIQ 302
>gi|52840553|ref|YP_094352.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52627664|gb|AAU26405.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 446
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L+ + + + ++ +N VIT +++ ++ L K Q I
Sbjct: 18 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 77
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ
Sbjct: 78 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 137
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
GI ++Q + + + V + ++ + I Y ++ ++
Sbjct: 138 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTSGRIENSNLTYHLKNIVI 197
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
+ + Q K + ++++ +D ++L + +S + G ++L
Sbjct: 198 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 257
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
F + ++ P G I +
Sbjct: 258 VFAKEVVHMKVGQVAGPIRAGNGFHLIKL 286
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + + + +R +L + + ++ Q +
Sbjct: 271 VAGPIRAGNGFHLIKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQ---VNNIY 327
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQ 264
+++ KD + K S V G ++ +L P+F+ + + + P TQ
Sbjct: 328 RQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQ 387
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G I + +R A K + K + + + LRS A I
Sbjct: 388 YGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYI 438
>gi|261823065|ref|YP_003261171.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium wasabiae
WPP163]
gi|261607078|gb|ACX89564.1| Peptidylprolyl isomerase [Pectobacterium wasabiae WPP163]
Length = 431
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 97/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + ++ + + ++ ++ V+ + D++ + +KL L
Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
LI++ + Q +K GI ++ A +S + S L +G+ N
Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLDQAITNIAAQNRMSLDQLKSQLAYEGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + + E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRVTVLPQEVDTLAKQIANQTGENDELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q Q + + + ++ D KL S G+ + ++ F
Sbjct: 187 PTQQQVDEAENLATSLVKQISEGADFGKLAITYSSDSQALKGGQMGWGKLQEIPTLFAER 246
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L ++Q P + G + + D R
Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIR 274
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/328 (15%), Positives = 105/328 (32%), Gaps = 66/328 (20%)
Query: 48 GEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+ IT+ R++L +L+ +E+++ ++ E+ + +T
Sbjct: 97 DQAITNIAAQNRMSLDQLKSQLAYEGLNYNTYRNQIRKEMLISEVRNNEVRRR-VTVLPQ 155
Query: 101 TVNYFFVQHARNT------GLS-----------------AEDFSSFLDKQ---------- 127
V+ Q A T LS AE+ ++ L KQ
Sbjct: 156 EVDTLAKQIANQTGENDELNLSHILIPLPENPTQQQVDEAENLATSLVKQISEGADFGKL 215
Query: 128 GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNLEMEIPANKQ 168
I + Q L Q W + V G +++ +
Sbjct: 216 AITYSSDSQALKGGQMGWGKLQEIPTLFAERLTQAQKGQVVGPIRSGVGFHILKVNDIRG 275
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
K+++V E R +L I + + Q ++ D + D K S+
Sbjct: 276 GNKSVSVTETHARHIL--IKPSVVMTDSQAQAKLADVAQQIKNGSTDFAAQAKLLSQDPG 333
Query: 229 VS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+ G + P F++ LLK + + P + G I + D R + A +
Sbjct: 334 SANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPVHSSFGWHLIQLLDTRQVDKTDAAQ 393
Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + K + ++++ R+ A
Sbjct: 394 KEQAYRMIFNRKFAEEAQTWMQEQRAAA 421
>gi|283850614|ref|ZP_06367901.1| SurA domain protein [Desulfovibrio sp. FW1012B]
gi|283573857|gb|EFC21830.1| SurA domain protein [Desulfovibrio sp. FW1012B]
Length = 330
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/335 (16%), Positives = 119/335 (35%), Gaps = 40/335 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+ L ++++ + + + + ++ +NG++IT D++ R+A L LQ+ G
Sbjct: 1 MPRLPKICLMLVLLVALTTTAWATQLVDKVVAVVNGKLITMFDVNARLADL-LQRTQGVS 59
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
EL + ++ +I + L +QE + ++ ++ + + L+ + F
Sbjct: 60 MRPDDPQAAELRRQVLESMINDILIEQEAARLKVSISETELDSQIDEIKKKNNLTQQQFV 119
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYL 179
+ L+K+G+ F++ + + S+ ++ K + EI K K T + L
Sbjct: 120 AELNKEGMTLKDFRERMRLDSVKKRLLGFMVHRKVLVTDDEIRDYYEKNKGALPTAKSIL 179
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQ 235
P + K A++ R ++ K A K G
Sbjct: 180 G-------PKVSGTIGFIMVATKKQADDLRAQITSGSLKFSDAAKKYSIGPGRDQGGDLG 232
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA----------- 283
+ DL P ++ LK + P + + + A
Sbjct: 233 DVQAKDLAPPLRDALKSVPAGQVSPPVMLDGKAVLLVLRTGAASTPAPAAPAPTPAGGPS 292
Query: 284 ---LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K +K EY+ LRS A+I
Sbjct: 293 FEGARDQIQEMLYKQKFDKLFQEYIDNLRSKAVIE 327
>gi|54293303|ref|YP_125718.1| hypothetical protein lpl0351 [Legionella pneumophila str. Lens]
gi|81679326|sp|Q5WZN0|SURA_LEGPL RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|53753135|emb|CAH14582.1| hypothetical protein lpl0351 [Legionella pneumophila str. Lens]
Length = 429
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L+ + + + ++ +N VIT +++ ++ L K Q I
Sbjct: 1 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ
Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
GI ++Q + + + V + ++ + I Y ++ ++
Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVDQYLKTAGRIENSNLTYHLKNIVI 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
+ + Q K + ++++ +D ++L + +S + G ++L
Sbjct: 181 PLSEEPTTRQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
F + ++ P G I +
Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKL 269
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + + + +R +L + + ++ Q +
Sbjct: 254 VAGPIRAGNGFHLIKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQ---VNNIY 310
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQ 264
+++ KD + K S V G ++ +L P+F+ + + + P TQ
Sbjct: 311 RQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQ 370
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G I + +R A K + K + + + LRS A I
Sbjct: 371 YGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYI 421
>gi|119474853|ref|ZP_01615206.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma
proteobacterium HTCC2143]
gi|119451056|gb|EAW32289.1| peptidyl-prolyl cis-trans isomerase SurA [marine gamma
proteobacterium HTCC2143]
Length = 440
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 122/317 (38%), Gaps = 19/317 (5%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIA--LLKL 65
S I+ LTT ++FC+ I + S ++ ++ +V+ ++ +R+A + +
Sbjct: 16 SRLIRSLTTLMASLLFCLPTIAAPDSNRGQALDQVIAIVDDDVVLASELQERVAQVVANI 75
Query: 66 QKINGEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
Q+ E+ + + +LI+E ++ Q ++G+ +N ++ A+ L+ +
Sbjct: 76 QQQGKEVPPLPEIRQSLMDQLILENIQMQLAVRAGVRISDAQLNDSMLRIAQQNQLTLDQ 135
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVRE 177
F LD G+ ++ + + + V + + + + EI + + +T +
Sbjct: 136 FRQALDADGLSYAGTREQIRKEMMLQRVQQGNVNQRVQITDQEITNFLDSDEGAALTAPD 195
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
Y + L +P + K + R++ + ++ A+ + + +
Sbjct: 196 YRMLHTLIPLPSSASSADITAAKVRAEKLYLRVQEGESYEEV--LATTPFETT--DLGWR 251
Query: 238 LESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTP 294
+DL +L + T P + G + + D R G A ++ +++
Sbjct: 252 KAADLPSLIADLTTTMAKDETAEPVQSPSGFHLVKLADSRGEGELIPQAKVRHILLKSSA 311
Query: 295 TKIEKHEAEYVKKLRSN 311
+ E LR
Sbjct: 312 IRDEAATEALAISLRQQ 328
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 61/159 (38%), Gaps = 9/159 (5%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + + + + +R +L + + + + ++ D +L +
Sbjct: 285 VKLADSRGEGELIPQAKVRHILLK---SSAIRDEAATEALAISLRQQIIDGADFGELARE 341
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--D 277
S+ + G + L +FQ ++ +++ N+ + P+ +Q G + + ++R D
Sbjct: 342 YSEDIGSALEGGDLGWSSPGQLVGEFQKVMDQAEINDISAPFTSQFGWHILQVLERRDKD 401
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ +I + K +++K+R A + +
Sbjct: 402 VTDDI-RRNITRNYLHKRKFGDELETWLQKIRDEAYVDF 439
>gi|296282383|ref|ZP_06860381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Citromicrobium
bathyomarinum JL354]
Length = 492
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 99/287 (34%), Gaps = 22/287 (7%)
Query: 44 TTINGEVITDGDISKRIALL----KLQKINGE----LEKIAVQELIVETLKKQEIEKSGI 95
+NG VIT DI R+AL+ + ++I + L ++ LI ETL+ Q +
Sbjct: 102 AKVNGTVITGTDIDHRVALVLAASERKEIPADQLQALRMQVLRNLIDETLQIQAAAAQDM 161
Query: 96 TFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
S VN + A+ G + + FL G K+ + + W +++ +
Sbjct: 162 EVSSEEVNQRYAILAQQNFGSNPQQMDKFLIAAGSSPATLKRQIQGEIAWQMLLRRNVAP 221
Query: 155 KYGNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRL 212
E+ +++K + EY + + + P+ + ++ +
Sbjct: 222 FINVSAEEVNDTIERLKTSRGQEEYRLAEIYLSATPETAATVEANAEQIMDQIRAG---- 277
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271
+F+ G ++ L Q + K + P G +
Sbjct: 278 GSFQAYARQFSESTTASVGGDLGFVRLGTLPGQMAEVATKMTPGQLVGPVPIPGGYVIML 337
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKI-EKHEAEYVKKLRSNAIIHYY 317
+ DKR + A LS + + + R+NA + +
Sbjct: 338 LLDKRQVLTADPRDAVLSLKQIAITFPQGTSQD-----RANARVEEF 379
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 9/183 (4%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+A + +V + + + + + + ++ + + P Q++
Sbjct: 314 VATKMTPGQLVGPVPIPGGYVIMLLLDKRQVLTADPRDAVLSLKQIAITFPQGTSQDRAN 373
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNN 256
+ + + + C + A + S+ + DL PQ Q +L+
Sbjct: 374 A---RVEEFANAIGTIRGCGDANRVAESV-GASVVDNDSITVRDLPPQLQASLMDLQVGQ 429
Query: 257 TTNPY-VTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
TT P+ Q GV + +C + D + GE + + +I K +++ LR +AI
Sbjct: 430 TTPPFGSMQDGVRVLLLCGRDDPEVNGEPDFDQIM-DRIEEERISKRAQRFLRDLRDDAI 488
Query: 314 IHY 316
I Y
Sbjct: 489 IEY 491
>gi|27065591|pdb|1M5Y|A Chain A, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
gi|27065592|pdb|1M5Y|B Chain B, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
gi|27065593|pdb|1M5Y|C Chain C, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
gi|27065594|pdb|1M5Y|D Chain D, Crystallographic Structure Of Sura, A Molecular Chaperone
That Facilitates Outer Membrane Porin Folding
Length = 408
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 84/237 (35%), Gaps = 12/237 (5%)
Query: 52 TDGDIS---KRIALLKLQKIN-----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ D+ + + L Q L ++ LI++ + Q +K G+ ++
Sbjct: 18 LESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLD 77
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A+ ++ + S L G+ N ++ + + I +V N+ + L E+
Sbjct: 78 QAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEV 137
Query: 164 P--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
A + +N E + +L +P+N +Q + A + R D KL
Sbjct: 138 ESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAI 197
Query: 222 FASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
S + G+ + +L F L + + P + G + + D R
Sbjct: 198 AHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLR 254
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 89/296 (30%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-------------- 118
+E+I+ ++ E+ + IT V Q S E
Sbjct: 109 RNQIRKEMIISEVRNNEVRRR-ITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENP 167
Query: 119 ----------DFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ +D+ G + K +A Q W +
Sbjct: 168 TSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQAL 227
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + KNI+V E R +L + + +
Sbjct: 228 STAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLK--PSPIMTDEQARV 285
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+++ K S+ + G + P F++ L + ++
Sbjct: 286 KLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQM 345
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 346 SAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 401
>gi|295675486|ref|YP_003604010.1| SurA domain protein [Burkholderia sp. CCGE1002]
gi|295435329|gb|ADG14499.1| SurA domain protein [Burkholderia sp. CCGE1002]
Length = 477
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 104/282 (36%), Gaps = 15/282 (5%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE--- 71
FV + + S I +N VIT ++ +R+ L+ +L + N
Sbjct: 42 AASFVPVASVQAQALGGNSGQTVDTIAAVVNNGVITQRELDERVGLIAHRLNQQNAPVPP 101
Query: 72 ---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L + + ++++E ++ Q+ ++ GI D V + A+ + + + ++ QG
Sbjct: 102 TDQLRQQVLTQMVLERIQLQKAKEDGINIDDAAVQRTLERLAQANNMPLAMYRARIEAQG 161
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLF 185
+ F + + + + K + E+ A+++ + ++ +
Sbjct: 162 VPWATFSNDARTELTLSRLREKEVDSKITVTDAEVANYIASQRGPGAGQTSDLHMQHIFV 221
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLH 243
S P N + ++ + + D KL K S+ D S G +L S L
Sbjct: 222 SAPLNAPETDIEAAQKKAQGLLAEAKGGADFGKLAKANSQAPDASKNGGDLGFLAPSKLP 281
Query: 244 PQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIA 283
P+F + + T G E + + ++R G A
Sbjct: 282 PEFVKAASTLRPGEISPDLIRTNDGFEIVRLVERRAGQGTSA 323
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 4/180 (2%)
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L I PD+++ + + L + + +R +L + Q++
Sbjct: 291 LRPGEISPDLIRTNDGFEIVRLVERRAGQGTSADAPKLVQTHVRHILLRV--GDGQSEPQ 348
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++++ D ++ G ++ + P+F+ + Q
Sbjct: 349 ARQKLIDIRNQIAAGGDFAKFAHTYSQDGSSSQGGDLGWISPGETVPEFERAMNALQDGQ 408
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
+ P ++ G I + +RD G IA + L+ Q K E+ A+++++LR A +
Sbjct: 409 ISEPVRSEYGYHLIQVLGRRDAEGSIAQQMDLARQAIGQRKAEQAYADWLRELRDTAYVE 468
>gi|253698853|ref|YP_003020042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
gi|251773703|gb|ACT16284.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
Length = 317
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 17/291 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI--------NGELEKIAVQELIVETLKKQEIE 91
S I +N E+IT ++ K L++QK L A+ L+ L +Q+I
Sbjct: 27 SGIAAIVNDEIITTLELDK--EYLQIQKEADKVPASDKSGLRGAALNRLVERKLIEQKIR 84
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I V + L+ E+ L QG+ ++ L Q ++ +
Sbjct: 85 ELNINVSDEEVRLAIEDVKKQNNLTQENLEQALATQGMTFAQYRIQLKEQLERLRLMSQE 144
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
K E E+ + R + F + + + + ++
Sbjct: 145 VRSKVQVGEREMREYYQANIAAYGGSEVFSARHIFFKVDKKGGAGELSKAEARANEVLAK 204
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKG 266
R +D L K S + G ++D+ P+ + + ++ + G
Sbjct: 205 ARAGEDFAALAKQYSDDPAAAKDGGDLGTFKKADMLPEIGDTVAAMQPGEVSSVVRSPSG 264
Query: 267 VEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ I + K+ G +K + K ++ A++VK+LR++A I
Sbjct: 265 LHIIKLEGKKQDAGRPFEEVKDSIEDTLYKKKSDERFAQWVKELRASAAIE 315
>gi|90409117|ref|ZP_01217239.1| diadenosinetetraphosphatase [Psychromonas sp. CNPT3]
gi|90309791|gb|EAS37954.1| diadenosinetetraphosphatase [Psychromonas sp. CNPT3]
Length = 413
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 16/268 (5%)
Query: 35 SWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKI---NGELEKIAVQELIVETLK 86
S +I +N EVI D+ + R LK+Q+ +L + + +LI ++L+
Sbjct: 1 STEHLDQIEAIVNQEVILSSDVKRMEKDIRARYLKMQQALPSKQKLRQQILDKLINDSLQ 60
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
Q E+ G+ D+ V+ Q + G + + L ++G F + + +
Sbjct: 61 LQVAERMGLRLDNAQVDQTIQQILKKEGKNIAQYQQELSRKGQSYQAFSDSVRNELTINE 120
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + + E EI Q++ ++ +L N Q++ K
Sbjct: 121 IRQMQVRQRLNISEQEINLMVQRLNKDGKKNTQFHFIHILLKTDPNAPL---HAQQQAKK 177
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ---NLLKKSQNNTTNPY 261
+ + + +++ + G + ++ F + LK + + P+
Sbjct: 178 IMQRLAQGESASSLARQYSQGPKALDGGDWGWRTVDEIPSLFADKFDELKTKKGDILGPF 237
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLS 289
T+ G+ I + DK+ + L+
Sbjct: 238 KTRLGLSIIQVSDKKGIKNTTTLEVNAR 265
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 11/169 (6%)
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F + G +++ K KN T E R +L I N + + + + + L
Sbjct: 237 FKTRLGLSIIQVSDKKGI-KNTTTLEVNARHIL--IKSNIILSDKKAKLLLNTYRQEILE 293
Query: 212 LPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
+ +L + S+ ++ G + + P+F++ + + + P+ T G
Sbjct: 294 GKANFAELARAHSQDPGSAVKGGNLGWADPNMYVPEFRDRAQSLRIGEISKPFHTMHGWH 353
Query: 269 YIAICDKRDLGGEIALKAYLSAQ---NTPTKIEKHEAEYVKKLRSNAII 314
+ + +KR + KA + ++ ++R A I
Sbjct: 354 ILEVLEKRQ--ADTTEKASKQKAYSILYKQRFPAEVYAWMNEIRQEAYI 400
>gi|85058404|ref|YP_454106.1| peptidyl-prolyl cis-trans isomerase SurA [Sodalis glossinidius str.
'morsitans']
gi|121956483|sp|Q2NVX4|SURA_SODGM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|84778924|dbj|BAE73701.1| survival protein SurA precursor [Sodalis glossinidius str.
'morsitans']
Length = 431
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 98/270 (36%), Gaps = 13/270 (4%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE------- 71
F+L + + NG ++ + ++ ++ +K
Sbjct: 6 TFILGLALCANGALAAPQVVDKVAAVVDNG-IVLESEVDNMLSTVKHGAQEANQQLPDDT 64
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + LI++ + Q +++ IT ++ A +S + S L GI
Sbjct: 65 TLRRQILDRLIMDNIILQLAQRTNITISDEQLDQAIGNIAAQNHMSLDQLRSRLPYDGID 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIP 188
N ++ + + + +V + + L E+ + Q + E+ + +L +P
Sbjct: 125 YNTYRTQIRKEMLIAEVRNGEVRRRVTILPQEVESLAQQIAAQTGNGAEFNLSHILIPLP 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQ 247
+N Q+Q + + + + + D KL +++ + G+ + +L F
Sbjct: 185 ENPTQDQLDKAEELATSIVEQSKSGADFGKLAITYSADAQALKGGQMGWGKLEELPSLFA 244
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L+ +Q + P + G + + D R
Sbjct: 245 ARLQGAQKGSIVGPIRSGVGFHILKVNDIR 274
Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 84/296 (28%), Gaps = 59/296 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+E+++ ++ E+ + +T V Q A T
Sbjct: 129 RTQIRKEMLIAEVRNGEVRRR-VTILPQEVESLAQQIAAQTGNGAEFNLSHILIPLPENP 187
Query: 116 SAEDFSSF-------LDKQGIGDNHFKQYLA----------IQSIWPDV----------- 147
+ + +++ G + K + Q W +
Sbjct: 188 TQDQLDKAEELATSIVEQSKSGADFGKLAITYSADAQALKGGQMGWGKLEELPSLFAARL 247
Query: 148 -------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ G +++ + + + V E R ++ + + +
Sbjct: 248 QGAQKGSIVGPIRSGVGFHILKVNDIRGGDQKVAVTEVHARHIMLRT--SVVMTDQQARA 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+++D K S+ + G + P F+N L+ +
Sbjct: 306 KLEDIAAQIKSGRISFAAAAKQLSEDPGSANQGGDLGWSSADAFDPAFRNALMHLKKGEI 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + ++++ R++A
Sbjct: 366 STPVHSSFGWHLIQLIDTRQVDRTDAAQKDRAYRLLFNRKFAEEAQTWMQEQRASA 421
>gi|118590091|ref|ZP_01547494.1| hypothetical protein SIAM614_11273 [Stappia aggregata IAM 12614]
gi|118437063|gb|EAV43701.1| hypothetical protein SIAM614_11273 [Stappia aggregata IAM 12614]
Length = 132
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--EKIAVQELIVET 84
+ ++ S A I+ +N ITD DIS+R L+ + + +K A +EL+ +
Sbjct: 2 LAAPLATPSHAA---IKIIVNDVPITDYDISQRARLITMTQRKSASIAKKQAEEELVDDQ 58
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
+K E E+ GI + V+ F ARN +S S L G+ + K+ L Q W
Sbjct: 59 VKLAEAERVGIDVSKSEVDNAFNNIARNVKMSPAQLSKALRSGGVQPDTLKERLKAQLAW 118
Query: 145 PDVVKNDFMLKYGN 158
V+++ F +
Sbjct: 119 NQVLRSRFSGRIEV 132
>gi|152995084|ref|YP_001339919.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp.
MWYL1]
gi|150836008|gb|ABR69984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp.
MWYL1]
Length = 416
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 105/285 (36%), Gaps = 14/285 (4%)
Query: 16 LTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70
L ++F LIIF + + + + I ++ + I + DI R ++K + G
Sbjct: 3 LFSFFSLIIFALASVQTLHAAPTKIDGISAIVDSKPILESDIMSRFQIVKDRVPGGVMTD 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ + ++I E L+ K G+ S+ V+ + A+N L + + L +GI
Sbjct: 63 NIHRQIQNQMIDEALQVNYARKVGMRASSSEVDNAILGVAKNMNLDLQGLKNVLADKGIN 122
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIP 188
+++ + + + ++ + + E EI +IT + +R ++
Sbjct: 123 YERYREQIEQEILINNIKREIVKKRIAISEQEIDDYLSSDTSITKEKDQVHLRHIIIR-A 181
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
N + ++ + + + + + G + + L P F
Sbjct: 182 SNPEEAAAKIKTIAGKIHSENDFVQQAIENSDGQFA----IEGGDLGWRPLNQLPPLFVR 237
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
L+ + P + G + + +KR ++ L+ ++
Sbjct: 238 ALESEKGPLIGPLQSNAGFHLLWVIEKR--SPDVTLQQQTKTRHI 280
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K+ ++ R +L + + Q K + D +L D +L K S+
Sbjct: 263 EKRSPDVTLQQQTKTRHILVRANEIRNMEQ---TKVLADELYKKLENGADFAQLAKEYSE 319
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GE 281
+ G ++ + P+F+ ++KK+ + + P+ TQ G + + +R+ +
Sbjct: 320 DQGSTLQGGDLGWVTLGAMVPEFEEVMKKTNIGDISKPFRTQFGWHILQVEGRREADISD 379
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ T K + ++ +LR++A I
Sbjct: 380 KVKRSNAERALTAQKQDIVLGNWLDELRADAFID 413
>gi|89898918|ref|YP_521389.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
gi|121956453|sp|Q223E5|SURA_RHOFD RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|89343655|gb|ABD67858.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
Length = 459
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/319 (15%), Positives = 109/319 (34%), Gaps = 21/319 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKINGE 71
++ + + + + A + I +N E IT+ ++ +L+ G
Sbjct: 26 LRPSSATVGAGVLAPARVPAATGLA-ADYIVAVVNSEPITNNEVRAALQRVLQQLAQQGN 84
Query: 72 LE-------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ + ++ LI E + Q +SGI D ++ AR L+ + L
Sbjct: 85 PQVDSKTLVRQVLERLINEKAQLQLARESGIAADEAAIDQAEQNIARQNQLTVAELRRRL 144
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
++G F+ L Q + + + + + E+EI +Q+ V++ +
Sbjct: 145 TQEGGVPGQFRNQLRDQILLTRLREREVEPRARVSELEIDQFLREQQSSTPAVQQINLAQ 204
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD----VSIGKAQYLL 238
VL S+PD Q + +R R +D L + S D + G+
Sbjct: 205 VLVSVPDTATPVQVTALQARAQRALARARAGEDFVTLVREFSDASDKASLANGGELGLRT 264
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL-----GGEIALKAYLSAQN 292
P F + + + + G + + +K+ + ++ +
Sbjct: 265 ADRYPPLFLEATHNLAVGEISALVRSGAGFHILKVLEKKSAALPAMTVTQSRARHILLRV 324
Query: 293 TPTKIEKHEAEYVKKLRSN 311
+P E + + + +
Sbjct: 325 SPQLTESAARDKLNEFKKR 343
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 51/159 (32%), Gaps = 11/159 (6%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + +TV + R +L + ++ E + R+
Sbjct: 300 LEKKSAALPAMTVTQSRARHILLRVSPQLTESAA-----RDKLNEFKKRVAAGQADFAAL 354
Query: 223 ASKIH----DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
A G + P+F+ ++ + + P V++ GV I + ++R
Sbjct: 355 ARDHSQDGSAAQGGDLGWANPGMFVPEFEAVMNSLTPGQISEPLVSRFGVHLIQLMERRQ 414
Query: 278 LGGEIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + A K+++ + + +R A +
Sbjct: 415 ATLSPQEQREAVRAMLHEKKLDEAYISWAQDVRGRAYVE 453
>gi|126664692|ref|ZP_01735676.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17]
gi|126631018|gb|EBA01632.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17]
Length = 481
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 87/249 (34%), Gaps = 12/249 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALL--KLQKINGEL------EKIAVQELIVETLKKQEIE 91
++ ++ +VI ++ RI + +LQ L ++ + +LI E+++ Q
Sbjct: 63 DQVVAIVDDDVILATELDARINSIVTRLQSQETTLPPRSLLQERVLDQLITESVQLQMAG 122
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K G+ N +N V A G+S E F L +G+ ++ + + + V +
Sbjct: 123 KMGMRISDNELNETMVSIAGRNGMSLEQFEQQLANEGVSYRDAREQIRNELLTSRVQQRQ 182
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ + E+ +Q + R I + VQ AE R +
Sbjct: 183 VGSRIRVTDREVENYQQAQQAGGGNTAEYRLAYIFIETEDPSSDASVQTARSKAEALRQQ 242
Query: 212 LPKD---CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
+ + + + + G + +ES L ++ + G
Sbjct: 243 IVEGRDFRAVAVAESDASNALEGGDMGWRVESQLPSLVAPVVPDLVVGQPSEVLQNSSGF 302
Query: 268 EYIAICDKR 276
+ + ++R
Sbjct: 303 HLVMVMEQR 311
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 60/155 (38%), Gaps = 7/155 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS- 224
+ + V++ +R +L + + + + +++D +L+ D +L K S
Sbjct: 310 QRGGEQQKLVQQNRVRHIL--VQPSDAITEAEAEDKVRDL-FEKLQNGADFAELAKAESD 366
Query: 225 -KIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLG-GE 281
+ G ++ + P+F+ ++ + P +Q G + + ++R +
Sbjct: 367 DTVSGSDGGNLGWVNPGQMVPEFEQAMQNATVGQIEGPVRSQFGWHLLQVQERRQKDMSD 426
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ K E +++++R A + +
Sbjct: 427 EFRESETRQTLYQRKFENELQNWLREIRDEAFVEF 461
>gi|122070648|sp|Q5ZYR3|SURA_LEGPH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 429
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L+ + + + ++ +N VIT +++ ++ L K Q I
Sbjct: 1 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ
Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
GI ++Q + + + V + ++ + I Y ++ ++
Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTSGRIENSNLTYHLKNIVI 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
+ + Q K + ++++ +D ++L + +S + G ++L
Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
F + ++ P G I +
Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKL 269
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + + + +R +L + + ++ Q +
Sbjct: 254 VAGPIRAGNGFHLIKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQ---VNNIY 310
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQ 264
+++ KD + K S V G ++ +L P+F+ + + + P TQ
Sbjct: 311 RQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQ 370
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G I + +R A K + K + + + LRS A I
Sbjct: 371 YGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYI 421
>gi|114331215|ref|YP_747437.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
eutropha C91]
gi|114308229|gb|ABI59472.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
eutropha C91]
Length = 424
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 42/250 (16%), Positives = 91/250 (36%), Gaps = 12/250 (4%)
Query: 40 SRIRTTINGEVITDGD--------ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
RI +N EVIT + I + LEK ++ LI++ ++ Q +
Sbjct: 21 DRIVAVVNEEVITQQETNELLQNTIQQLQKQNIQLPSMEVLEKQLLERLIIKRIQLQRAK 80
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ G++ N ++ + ++ L+ ++F L ++G + F+ + + + + + +
Sbjct: 81 EVGLSVSDNDLDQTLRRIVQDNHLTMDEFRQVLLQEGTNLSLFRDEIRDEILMSRLKEQE 140
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E EI Q EY I +L + + Q + + +A
Sbjct: 141 INSRVNVTESEIDNFLENQANSPAANEEYRIAHILVQTSEQMDEAQINTRHKRAEAAYED 200
Query: 210 LRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267
LR ++ S D G+ + + F LL+ T + G
Sbjct: 201 LRQGISFAQVSAEYSDATDAMQGGELGWRPLGQIGSPFAELLLQMQPGEITPVVRSPIGF 260
Query: 268 EYIAICDKRD 277
+ + ++R
Sbjct: 261 HILKLLERRQ 270
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/314 (12%), Positives = 98/314 (31%), Gaps = 60/314 (19%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-------- 110
R LL+ E+++ LK+QEI S + + ++ F A
Sbjct: 110 RQVLLQEGTNLSLFRDEIRDEILMSRLKEQEI-NSRVNVTESEIDNFLENQANSPAANEE 168
Query: 111 ---------RNTGLSAEDFSSFLDKQGIGDNHFKQYLA-----------------IQSIW 144
+ + ++ + +Q ++ + W
Sbjct: 169 YRIAHILVQTSEQMDEAQINTRHKRAEAAYEDLRQGISFAQVSAEYSDATDAMQGGELGW 228
Query: 145 PDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVRE-YLIRTVLF 185
+ + G +++ +Q+ K++T+ E + +L
Sbjct: 229 RPLGQIGSPFAELLLQMQPGEITPVVRSPIGFHILKLLERRQQEKSVTIIEQTHAQHILI 288
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHP 244
+ + + ++ D R+ D ++ K S+ + G ++ D P
Sbjct: 289 KVSEIISEEDAH---QLIDQIMERIHNGADFMEMAKAHSEDASASAGGDLGWVSPGDTVP 345
Query: 245 QFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEA 302
+F+ + + P T G I + ++R + + + K +
Sbjct: 346 EFEQAMNALLPGQISQPVRTSFGWHLIKVIERRSQDVSEQKQRETARKTIHARKADAVTQ 405
Query: 303 EYVKKLRSNAIIHY 316
E++++LR A + Y
Sbjct: 406 EWLQQLRDQAYVEY 419
>gi|227327727|ref|ZP_03831751.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 431
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 97/268 (36%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + ++ + + ++ ++ V+ + D++ + +KL L
Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
LI++ + Q +K GI ++ A +S + S L +G+ +
Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLDQAITNIAAQNRMSLDQLKSQLAYEGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + + E + +L +P+N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVDTLAKQIATQTGENDELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q Q + + + ++ D KL S G+ + ++ F
Sbjct: 187 PTQQQVDEAENLATSLVKQINEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAER 246
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L ++Q P + G + + D R
Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIR 274
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/328 (15%), Positives = 105/328 (32%), Gaps = 66/328 (20%)
Query: 48 GEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+ IT+ R++L +L+ +E+++ ++ E+ + IT
Sbjct: 97 DQAITNIAAQNRMSLDQLKSQLAYEGLNYSTYRNQIRKEMLISEVRNNEVRRR-ITVLPQ 155
Query: 101 TVNYFFVQHARNT------GLS-----------------AEDFSSFLDKQ---------- 127
V+ Q A T LS AE+ ++ L KQ
Sbjct: 156 EVDTLAKQIATQTGENDELNLSHILIPLPENPTQQQVDEAENLATSLVKQINEGADFGKL 215
Query: 128 GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNLEMEIPANKQ 168
I + Q L Q W + V G +++ +
Sbjct: 216 AITYSADSQALKGGQMGWGKLQEIPTLFAERLTQAQKGQVVGPIRSGVGFHILKVNDIRG 275
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
K+++V E R +L I + + Q ++ + + D K S+
Sbjct: 276 GNKSVSVTETHARHIL--IKPSVVMTDSQAQAKLAEVAQQIKNGSTDFASQAKLLSQDPG 333
Query: 229 VS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+ G + P F++ LLK + + P + G I + D R + A +
Sbjct: 334 SANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPVHSSFGWHLIQLLDTRQVDKTDAAQ 393
Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + K + ++++ R+ A
Sbjct: 394 KEQAYRMIFNRKFAEEAQTWMQEQRAAA 421
>gi|148358511|ref|YP_001249718.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella pneumophila
str. Corby]
gi|296105860|ref|YP_003617560.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella pneumophila
2300/99 Alcoy]
gi|148280284|gb|ABQ54372.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella
pneumophila str. Corby]
gi|295647761|gb|ADG23608.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella pneumophila
2300/99 Alcoy]
Length = 429
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L+ I + + ++ +N VIT +++ ++ L K Q I
Sbjct: 1 MFKRIALVCALFSGICFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ
Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
GI ++Q + + + V + ++ + I Y ++ ++
Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTAGRIENSNLTYHLKNIVI 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
+ + Q K + ++++ +D ++L + +S + G ++L
Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
F + ++ P G I +
Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKL 269
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + + + +R +L + + ++ Q +
Sbjct: 254 VAGPIRAGNGFHLIKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQ---VNNIY 310
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQ 264
+++ KD + K S V G ++ +L P+F+ + + + P TQ
Sbjct: 311 RQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQ 370
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G I + +R A K + K + + + LRS A I
Sbjct: 371 YGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYI 421
>gi|307609120|emb|CBW98563.1| hypothetical protein LPW_03901 [Legionella pneumophila 130b]
Length = 429
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L+ + + + ++ +N VIT +++ ++ L K Q I
Sbjct: 1 MFKRIALVCALFSGVCFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ
Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
GI ++Q + + + V + ++ + I Y ++ ++
Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKTAGRIENSNLTYHLKNIVI 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
+ + Q K + ++++ +D ++L + +S + G ++L
Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
F + ++ P G I +
Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKL 269
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + + + +R +L + + ++ Q +
Sbjct: 254 VAGPIRAGNGFHLIKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQ---VNNIY 310
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQ 264
+++ KD + K S V G ++ +L P+F+ + + + P TQ
Sbjct: 311 RQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQ 370
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G I + +R A K + K + + + LRS A I
Sbjct: 371 YGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYI 421
>gi|54296347|ref|YP_122716.1| hypothetical protein lpp0376 [Legionella pneumophila str. Paris]
gi|81679579|sp|Q5X877|SURA_LEGPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|53750132|emb|CAH11524.1| hypothetical protein lpp0376 [Legionella pneumophila str. Paris]
Length = 429
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 98/269 (36%), Gaps = 12/269 (4%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L+ I + + ++ +N VIT +++ ++ L K Q I
Sbjct: 1 MFKRIALVCALFSGICFAEGKQLLDKVVAIVNDNVITSSELNAQVELSKKQIIAQNMQMP 60
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L K +Q LI L+ Q +++GIT ++ ++ + A + L+ + KQ
Sbjct: 61 DESVLRKQVLQHLIDVDLEMQMAKQNGITIENAEIDEAIEKIAASNHLNLSQMRDEITKQ 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLF 185
GI ++Q + + + V + ++ + I Y ++ ++
Sbjct: 121 GISWQEYRQNIRKEMLISRVQQKAVGKDIIVTNEQVEQYLKNAGRIENSNLTYHLKNIVI 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
+ + Q K + ++++ +D ++L + +S + G ++L
Sbjct: 181 PLSEEPTTKQLQRAKIEAENLLNKIKKGEDFSRLAIEESSGEFALEGGDLGERHLAELPE 240
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
F + ++ P G I +
Sbjct: 241 VFAKEVVHMKVGQVAGPIRAGNGFHLIKL 269
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 7/171 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + + + +R +L + + ++ Q +
Sbjct: 254 VAGPIRAGNGFHLIKLVAVGGENQRHVITQTHVRHILLKPDASMVPSEAIKQ---VNNIY 310
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQ 264
+++ KD + K S V G ++ +L P+F+ + + + P TQ
Sbjct: 311 RQIQSGKDFALMAKQYSLDAASAVKGGDLGWVNPGELVPEFEKTMNSLPLHKVSKPVKTQ 370
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G I + +R A K + K + + + LRS A I
Sbjct: 371 YGWHLIEVIARRQKDDSEAFKKQQVRQFLQQRKFVEAVQNWQQHLRSQAYI 421
>gi|124265396|ref|YP_001019400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylibium
petroleiphilum PM1]
gi|124258171|gb|ABM93165.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylibium
petroleiphilum PM1]
Length = 437
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 103/300 (34%), Gaps = 13/300 (4%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIA 76
F + + I ++ E++T+ ++ +R+A L+ + EL +
Sbjct: 22 FVANAVAQPSPVRSADYIVAIVDRELVTNAEVQQRLAALRREAAQSGQALPPDDELRRRM 81
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI E + +SG+ D ++ A ++ L + GI + F+
Sbjct: 82 LDTLIDERAQLSAARESGVRIDEAELDRTVGNVAAQNRITLAQLRERLQRDGIEFSRFRS 141
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQ 195
L Q + V + + + + E+ + ++ + +L +P+ + +
Sbjct: 142 NLRDQLLLERVREREVQSRIKISDSEVETLLASRASGVAPPQFNVAQLLIGVPEGAGEAE 201
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
++ + + R R +D +L S G L F + ++ +
Sbjct: 202 LAQRRVLAEQALQRARGGEDFARLVNELSTGSKEQGGALGLRTLDRLPDLFADAVRDLRG 261
Query: 256 NTTNPYVTQK--GVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P V Q G + + ++RD G ++ + + + + + +
Sbjct: 262 GAIVPQVLQSGAGFHVLKVVERRDGGMMVPQTRARHILLRTSAQLTQSAAVARLAEFKQQ 321
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 59/297 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS----------- 121
+L++E ++++E++ I + V A G++ F+
Sbjct: 140 RSNLRDQLLLERVREREVQSR-IKISDSEVETLLASRAS--GVAPPQFNVAQLLIGVPEG 196
Query: 122 ---SFLDKQGIGDNHFKQYLAIQSIWPDVVKN--------------DFMLKYGNLEMEIP 164
+ L ++ + Q + +V + + +L +
Sbjct: 197 AGEAELAQRRVLAEQALQRARGGEDFARLVNELSTGSKEQGGALGLRTLDRLPDLFADAV 256
Query: 165 ANKQKMK-----------------------NITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + + V + R +L Q+ R
Sbjct: 257 RDLRGGAIVPQVLQSGAGFHVLKVVERRDGGMMVPQTRARHILLRTSAQLTQSAAVA--R 314
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTN 259
+ + ++ +L + S+ + G+ + P+F+ +K N ++
Sbjct: 315 LAEFKQQVDSGKASFAQLARENSEDGSAAQGGELGWASPGQFVPEFEEAMKALGINQVSD 374
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P V++ GV I + ++R + + + + K E E+ + +R+ A +
Sbjct: 375 PVVSRFGVHLIQVLERRSVPVDRKQQREIARNVLREQKFESAYQEWARDVRARAYVE 431
>gi|24375136|ref|NP_719179.1| survival protein surA [Shewanella oneidensis MR-1]
gi|81744686|sp|Q8EB95|SURA_SHEON RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|24349906|gb|AAN56623.1|AE015799_10 survival protein surA [Shewanella oneidensis MR-1]
Length = 434
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 110/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKAANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR ++ +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+GI + +++ L + ++ + + EI +Q MK++ EY
Sbjct: 121 ASEGISFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + +A RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPTSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ + + P T G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKKGDIIGPIKTGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + L + S+
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKF----EDLARQYSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ + S P+F L S + + P+ T G + ++R
Sbjct: 332 DPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTHGWHITQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R++A I +
Sbjct: 392 QFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427
>gi|300310041|ref|YP_003774133.1| parvulin-like peptidyl-prolyl cis-trans isomerase [Herbaspirillum
seropedicae SmR1]
gi|124483574|emb|CAM32660.1| Parvulin-like peptidyl-prolyl [Herbaspirillum seropedicae]
gi|300072826|gb|ADJ62225.1| parvulin-like peptidyl-prolyl cis-trans isomerase protein
[Herbaspirillum seropedicae SmR1]
Length = 496
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 96/249 (38%), Gaps = 12/249 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELE--------KIAVQELIVETLKKQEIE 91
I +N EVIT +++ R+A + + ++ + V+ +IVE + Q +
Sbjct: 90 DSIMVVVNNEVITRQEVADRLASVVKRMSAQNVQLPPRDQLVRQLVERMIVERAQAQMAK 149
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
++GI D ++ + A LS F + L+ +G+ F++ + + + + + +
Sbjct: 150 ENGIVVDDAMLDRAMQRIADQNKLSMAQFRTRLEAEGMNYASFREEIRREILSQRLRERE 209
Query: 152 FMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
K E E+ N +E I +L +P+N +Q ++ + +
Sbjct: 210 VDNKVVVTESEVDNYLAAEANAGGQRQELDIAQILIRVPENATPDQLAQRRERAEDVLRQ 269
Query: 210 LRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
L+ D K S D S G + L F + + K Q + + G
Sbjct: 270 LKTGADFAKTAAAYSDASDALSGGDLGWRPADRLPQLFLDGVAKLQDGQVSGLLKSGNGF 329
Query: 268 EYIAICDKR 276
+ + +R
Sbjct: 330 HILKLVGRR 338
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYL 237
+R +L + N++ ++++ + +E +L K S + G ++
Sbjct: 354 HVRHILIKV--NQVVTAAEAKRKLTELKERLDHGSATFEELAKLYSNDLSASKGGDLGWV 411
Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTP 294
D P+F+ + + + P T G I + +++ D E A +A A
Sbjct: 412 YPGDTVPEFERAMDQLKPGEVSQPIETPFGYHLIQVVERKTDDASKERARQAARQA-IRE 470
Query: 295 TKIEKHEAEYVKKLRSNAIIHY 316
KI++ ++++++R A + Y
Sbjct: 471 RKIDEATEDWMRQIRDRAYVEY 492
>gi|253689994|ref|YP_003019184.1| Peptidylprolyl isomerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756572|gb|ACT14648.1| Peptidylprolyl isomerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 431
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 96/268 (35%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + ++ + + ++ ++ V+ + D++ + +KL L
Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
LI++ + Q +K GI + A +S + S L +G+ N
Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLEQAITNIAAQNRMSLDQLKSQLAYEGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + + E + +L +P+N
Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRVTVLPQEVDTLAKQIANQTGENDELNLSHILIPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q Q + + + ++ D KL S G+ + ++ F
Sbjct: 187 PTQQQVDEAENLATSLVKQISEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAER 246
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L ++Q P + G + + D R
Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIR 274
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 54/345 (15%), Positives = 111/345 (32%), Gaps = 70/345 (20%)
Query: 35 SWAMSSRIRTTINGE----VITDGDISKRIALLKLQKING-------ELEKIAVQELIVE 83
M+ ++ + E IT+ R++L +L+ +E+++
Sbjct: 80 ILQMAQKMGIQVTDEQLEQAITNIAAQNRMSLDQLKSQLAYEGLNYNTYRSQIRKEMLIS 139
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNT------GLS-----------------AEDF 120
++ E+ + +T V+ Q A T LS AE+
Sbjct: 140 EVRNNEVRRR-VTVLPQEVDTLAKQIANQTGENDELNLSHILIPLPENPTQQQVDEAENL 198
Query: 121 SSFLDKQ----------GIGDNHFKQYLAI-QSIWPDV------------------VKND 151
++ L KQ I + Q L Q W + V
Sbjct: 199 ATSLVKQISEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAERLTQAQKGQVVGP 258
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
G +++ + K+++V E R +L I + + Q ++ D +
Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHIL--IKPSVVMTDSQAQAKLADVAQQIKN 316
Query: 212 LPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
D K S+ + G + P F++ LLK + + P + G
Sbjct: 317 GSTDFAAQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPIHSSFGWH 376
Query: 269 YIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
I + D R + A + + + K + ++++ R++A
Sbjct: 377 LIQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRASA 421
>gi|329114153|ref|ZP_08242915.1| Chaperone SurA [Acetobacter pomorum DM001]
gi|326696229|gb|EGE47908.1| Chaperone SurA [Acetobacter pomorum DM001]
Length = 454
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 84/268 (31%), Gaps = 17/268 (6%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAV 77
+ I IN +T D+ R L L L +
Sbjct: 37 AATQQTATPAQPEPDDMILAVINSIPLTKRDVDNRGKLFALSTGLPLTPDLMARLRPQII 96
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++LI E L+ QEI I + R G+ L + G+
Sbjct: 97 RQLIDERLRTQEILSRHINVPPEQIAGAITNIERRNGMPEGTLREHLAQDGVSLTTLIDQ 156
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSI--PDNKLQN 194
+ +Q W V++ + + +I + +K EY + + + P + +
Sbjct: 157 IRVQIGWIQVLRQELGARSRVSAQDIAQRQAALKREEGRTEYELAEIFVKVEDPRHDQEE 216
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
F I++ + +F+ + G ++ E +L P ++++
Sbjct: 217 LDFTNTVIQELR----KGAPFPIVAAQFSQSQTALDGGSMGWVQEDELDPAVVQVVRQMP 272
Query: 255 ---NNTTNPYVTQKGVEYIAICDKRDLG 279
+NP G I + KR +G
Sbjct: 273 VGVGAISNPIKVPGGYVIITLNGKRVIG 300
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F P + + ++ A + ++ C ++E + + L+P
Sbjct: 316 FDTPLDPQHITPQQESTLQKAMQV-IQNTHSCTEMEALNKAEGEKRPTDPGEMPLERLNP 374
Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
Q Q+LL + + P V++ G++ + +C K++ + ++ Q ++E+ +
Sbjct: 375 QMQSLLADLPEGKVSRPLVSRDGIDLLMVCTKKEKNFSNRSPSEIADQLMNERVEQAARQ 434
Query: 304 YVKKLRSNAIIHYY 317
L AII +
Sbjct: 435 LDSDLHRRAIIDKH 448
>gi|258405810|ref|YP_003198552.1| SurA domain-containing protein [Desulfohalobium retbaense DSM 5692]
gi|257798037|gb|ACV68974.1| SurA domain protein [Desulfohalobium retbaense DSM 5692]
Length = 311
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 114/303 (37%), Gaps = 22/303 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGEL--------EKI 75
V + RI +NGE+IT +++++ + + G L +K
Sbjct: 14 FCSAVPATGEQVVDRIVAVVNGEIITLFELNQKADPVVERFRSQQPGSLTEDRIEEIKKR 73
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+Q ++ L +QE E+ + + V + G E L +G+ + F+
Sbjct: 74 VLQTMVDNMLLRQEAERLEMEIEDAEVQDRIEEMKTQRGWDDERLDQMLANEGLDRSSFE 133
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +V K EI + + +E + L ++P
Sbjct: 134 KNIREDLMRRRLVGAMVRRKVVVTNEEIQTFYKDNQEQFAQEKKVDLRLLAVPSVDKAK- 192
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-Q 254
+++RI D + ++F+ G ++ +DL PQ++ +L+ +
Sbjct: 193 -QLRQRITDGD------LDFAQAAKQFSQGPAAGQGGDLGWVKWADLAPQWKEVLRSTSP 245
Query: 255 NNTTNPYVTQKGVEYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T P+ Q + + D K + A++ ++ K EK Y+++LR A
Sbjct: 246 GSMTEPFSLQGQTAILYLEDMQKGQVQPLSAVRDRIADTLRGPKFEKQLETYLQRLRDKA 305
Query: 313 IIH 315
++
Sbjct: 306 VVD 308
>gi|258542094|ref|YP_003187527.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256633172|dbj|BAH99147.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256636229|dbj|BAI02198.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|256639284|dbj|BAI05246.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|256642338|dbj|BAI08293.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|256645393|dbj|BAI11341.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|256648448|dbj|BAI14389.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|256651501|dbj|BAI17435.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654492|dbj|BAI20419.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-12]
Length = 454
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 84/268 (31%), Gaps = 17/268 (6%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-------NGELEKIAV 77
+ I IN +T D+ R L L L +
Sbjct: 37 AATQQTATPAQPEPDDMILAVINSIPLTKRDVDNRGKLFALSTGLPLTPDLMARLRPQII 96
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++LI E L+ QEI I + R G+ L + G+
Sbjct: 97 RQLIDERLRTQEILSRHINVPPEQIAGAITNIERRNGMPEGTLREHLAQDGVSLTTLIDQ 156
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSI--PDNKLQN 194
+ +Q W V++ + + +I + +K EY + + + P + +
Sbjct: 157 IRVQIGWIQVLRQELGARSRVSAQDIAQRQAALKREEGRTEYELAEIFVKVEDPRHDQEE 216
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
F I++ + +F+ + G ++ E +L P ++++
Sbjct: 217 LDFTNTVIQELR----KGAPFPIVAAQFSQSQTALDGGSMGWVQEDELDPAVVQVVRQMP 272
Query: 255 ---NNTTNPYVTQKGVEYIAICDKRDLG 279
+NP G I + KR +G
Sbjct: 273 VGVGAISNPIKVPGGYVIITLNGKRVIG 300
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F P + + ++ A + ++ C ++E + + L+P
Sbjct: 316 FDTPLDPQHITPQQESTLQKAMQV-IQNTHSCTEMEALNKAEGEKRPTDPGEMPLERLNP 374
Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
Q Q+LL + + P V++ G++ + +C K++ + ++ Q ++E+ +
Sbjct: 375 QMQSLLADLPEGKVSRPLVSRDGIDLLMVCTKKEKNFSNRSPSEIADQLMNERVEQAARQ 434
Query: 304 YVKKLRSNAIIHYY 317
L AII +
Sbjct: 435 LDSDLHRRAIIDKH 448
>gi|42521061|ref|NP_966976.1| hypothetical protein WD1266 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410802|gb|AAS14910.1| hypothetical protein WD_1266 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 399
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALL-----KLQKINGELEKIAVQELIVETLKKQEIE 91
A I +NGE I++ DI KRI + E + ++ELI E + E +
Sbjct: 36 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIIIINEAQ 95
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ I + ++ + + L A + +++K I ++ + Q +W +++
Sbjct: 96 RLNIKLSNEELDNAIMLFLTQSFKLKANEVDQYIEKHNIDLGILRKQIKCQLLWGKIIEV 155
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK------LQNQGFVQKRIKD 204
+ + E+ K++ + +YLI F IPD K + + R D
Sbjct: 156 RIVPFINISDKEVDDVKRQTEKP---DYLITFQEFIIPDQKDKDVYGIAEDLVKKLRNSD 212
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIG 232
ES +++ K L + K+ V G
Sbjct: 213 NPESPIKMRKATVNLSQLKGKLKSVLEG 240
>gi|50122778|ref|YP_051945.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium
atrosepticum SCRI1043]
gi|81693097|sp|Q6D0E2|SURA_ERWCT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|49613304|emb|CAG76755.1| survival protein [Pectobacterium atrosepticum SCRI1043]
Length = 431
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 96/268 (35%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + ++ + + ++ ++ V+ + D++ + +KL L
Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
LI++ + Q +K GI ++ A +S + S L +G+ N
Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLDQAITNIAAQNRMSIDQLKSQLANEGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + + E + +L +P+N
Sbjct: 127 TYRSQIRKEMLISEVRNNEVRRRVTVLPQEVDTLAKQIANQTGENDELNLSHILLPLPEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q Q + + + ++ D KL S G+ + ++ F
Sbjct: 187 PTQQQVDEAENLATSLVKQISEGADFGKLAITYSSDSQALKGGQMGWGKLQEIPTLFAER 246
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L + Q P + G + + D R
Sbjct: 247 LTQVQKGQVVGPIRSGVGFHILKVNDIR 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/328 (15%), Positives = 105/328 (32%), Gaps = 66/328 (20%)
Query: 48 GEVITDGDISKRIALLKLQKINGEL-------EKIAVQELIVETLKKQEIEKSGITFDSN 100
+ IT+ R+++ +L+ +E+++ ++ E+ + +T
Sbjct: 97 DQAITNIAAQNRMSIDQLKSQLANEGLNYNTYRSQIRKEMLISEVRNNEVRRR-VTVLPQ 155
Query: 101 TVNYFFVQHARNT------GLS-----------------AEDFSSFLDKQ---------- 127
V+ Q A T LS AE+ ++ L KQ
Sbjct: 156 EVDTLAKQIANQTGENDELNLSHILLPLPENPTQQQVDEAENLATSLVKQISEGADFGKL 215
Query: 128 GIGDNHFKQYLAI-QSIWPDV------------------VKNDFMLKYGNLEMEIPANKQ 168
I + Q L Q W + V G +++ +
Sbjct: 216 AITYSSDSQALKGGQMGWGKLQEIPTLFAERLTQVQKGQVVGPIRSGVGFHILKVNDIRG 275
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
K+++V E R +L I + + Q ++ D + D K S+
Sbjct: 276 GNKSVSVTETHARHIL--IKPSVVMTDSQAQAKLADVAQQIKNGSTDFAAQAKLLSQDPG 333
Query: 229 VS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+ G + P F++ LLK + + P + G I + D R + A +
Sbjct: 334 SANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPIHSSFGWHLIQLLDTRQVDKTDAAQ 393
Query: 286 AYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + K + ++++ R+ A
Sbjct: 394 KEQAYRMIFNRKFAEEAQTWMQEQRAAA 421
>gi|119775949|ref|YP_928689.1| survival protein surA [Shewanella amazonensis SB2B]
gi|119768449|gb|ABM01020.1| survival protein surA [Shewanella amazonensis SB2B]
Length = 434
Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 105/312 (33%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------Q 66
+K + + S + R+ +N ++ + +I + +K Q
Sbjct: 1 MKPCKKLIFAALAMTMGFQSLAAPQPLDRVAVQVNDGIVLESEIQNMMDTVKKNALAAGQ 60
Query: 67 KINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ + L ++ LI+ L+ Q E+ G+ ++ AR ++ +
Sbjct: 61 TLPSDDALRTQVIERLILTRLQLQMAERVGLHIGDLQLDQAIENIAREQKMTVAQMQQAI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+G+ +++ L + ++ + + EI +Q K++ EY
Sbjct: 121 QAEGMSFAQYREQLREEITLGEIQRIQVQRRIQVSPQEINNLVKMIEEQGNKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLL 238
I +L +P N + + A RL D +S + G Y+
Sbjct: 178 IGHILIEVPSNPTSAELESASKRAQAVMDRLNSGNDFRSIAIAASSGPKALEGGVWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ ++ P + G + I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVIGDAKKDAIIGPIKSGSGFHILKIMDIRGLQTREIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E+ +
Sbjct: 298 ILSEERAKAMLD 309
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 53/152 (34%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ + E R +L + + ++ + + + + S+
Sbjct: 276 RGLQTREIEEVRARHILLK--PSPILSEERAKAMLDQFVTQIKSGEAKFADIARQYSEDP 333
Query: 228 DVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G+ + + P+F +L + S + + P+ T G + + +KR
Sbjct: 334 GSATKGGELGWAEPNIYVPEFAQMLGQLSLDEISAPFRTAHGWHIVQLEEKRKTDATEKF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315
+ Q K + ++ ++RS A I
Sbjct: 394 NTNRAHQLIFRRKFNEELQGWLDEIRSEAHID 425
>gi|311696171|gb|ADP99044.1| survival protein surA [marine bacterium HP15]
Length = 446
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 90/249 (36%), Gaps = 12/249 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ-KINGE-------LEKIAVQELIVETLKKQEIE 91
++ ++ +VI ++ RI + + G LE+ + +LI E+++ Q +
Sbjct: 32 DQVVAIVDEDVILQTELEARINTITSRLGAQGTALPPRQVLEERVLDQLITESIQMQMAD 91
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
++G+ N +N A G+S F + L+ +G+ N ++ + + + V +
Sbjct: 92 RAGMRISDNELNETMANIAERNGMSLPQFENQLEAEGVTYNQAREQIRKEMLTSRVQQRQ 151
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ + E+ + ++ R + + ++ V + AE R
Sbjct: 152 VGNRVRVTDREVENYLESLEARGGNNAQYRLAYIFVSVDDPSDEAEVDAAREKAERLRSE 211
Query: 212 LPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
+ + + + + G + E L ++ + ++ G
Sbjct: 212 IANGRDFREVAVAESDASNALEGGDMGWRAEGQLPSLVAPVVPELPVGEPSDVLENNSGF 271
Query: 268 EYIAICDKR 276
+ + DKR
Sbjct: 272 HLVMVMDKR 280
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 57/156 (36%), Gaps = 9/156 (5%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + ++++ +R +L + +Q R +L+ + L + S
Sbjct: 279 KRGGEQQQMIQQHRVRHILVRPSEATTDSQAETVIR---DLYQQLQNGASFSALAREYSD 335
Query: 226 --IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGG 280
+ G ++ + P F Q +L P+ +Q G + + ++R D+ G
Sbjct: 336 DPVSGSDGGNLGWVSPGQMVPAFEQAMLDADIGELRGPFRSQFGWHILQVQERRQKDISG 395
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ A K E +++++R A + +
Sbjct: 396 D-VRDAEARQAIYRRKFETELQNWLQEIRDEAFVEF 430
>gi|330993926|ref|ZP_08317856.1| Chaperone surA [Gluconacetobacter sp. SXCC-1]
gi|329758872|gb|EGG75386.1| Chaperone surA [Gluconacetobacter sp. SXCC-1]
Length = 462
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 15/264 (5%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQEIEKSG 94
I T+NG V+T D+ R L L + L V++LI E L+ QE+
Sbjct: 67 IIATVNGAVLTKRDVDTRGRLFALSSGLDVSDDVMQRLRPQIVRQLIDEKLRMQEMLDRH 126
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I + + G+ + L + G+ + +Q W V++ +
Sbjct: 127 INVPIQQIADAIAGIEQRNGMPQNALRNKLAEDGVSLTTLIDQIRVQLGWTQVLRQETGE 186
Query: 155 KYGNLEMEIPANKQKMKNITV-REYLIRTVLFSI--PDNKLQNQGFVQKRIKDAEESRLR 211
+ +I + +K EY+I + + P + F + I++ +
Sbjct: 187 RGRITAADIEQRTEALKREDGKPEYMISEIFVPVEDPRHTENELKFTETIIQELRQG-AP 245
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
P +F+ + G ++ E L PQ ++ +K +NP G
Sbjct: 246 FP---VVAAQFSQGQSALDGGMMGWMQEDGLDPQVVDVARKMPDGAISNPIRVAGGYVIA 302
Query: 271 AICDKRDLGGEIALKAYLSAQNTP 294
I ++R +G ++A + P
Sbjct: 303 TIAERRTVGHQMATILSIRQAFFP 326
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 62/155 (40%), Gaps = 6/155 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP---KDCNKLEK 221
A ++ + + IR F P + + + K ++ + C+++E
Sbjct: 305 AERRTVGHQMATILSIRQAFF--PFDAPLDPENATDQQKATLDAANTFSGEARSCDQVEA 362
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
K+ + L+ + L+PQ + +L+ N + P V+ G+ + +C + +
Sbjct: 363 QNKKLGEKHPTDPGELMLNHLNPQMREILEPLPVNKASKPLVSIDGILVLMVCSREERNI 422
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + ++ ++E+ + + L+ AII
Sbjct: 423 AVQTPSQIADHLLNERVEQTSRQLNRDLQRRAIID 457
>gi|149907522|ref|ZP_01896269.1| survival protein surA [Moritella sp. PE36]
gi|149809192|gb|EDM69121.1| survival protein surA [Moritella sp. PE36]
Length = 428
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 42/316 (13%), Positives = 110/316 (34%), Gaps = 23/316 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI--------SKRIALLKLQK 67
+ + + + + + +N EVI D+ ++ +
Sbjct: 1 MLKTLLSGVIVVTSWQAQAELTKLDEVIAIVNEEVILASDVNTLTRSVTARATKAGQTLP 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L + A+ +LI+++L+ Q +K G+ + + A+ + E +
Sbjct: 61 SQEVLTQQALDKLIIDSLQLQMAKKMGMRISNAQLEDTLNNIAKGDNQTVEQLRQSVVAD 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLF 185
G N +K+ + Q + +V + + + ++ + R+Y + ++
Sbjct: 121 GGDFNDYKEEIRTQILTNEVQRMQMRRRITISDQDVDNLIAIIDEQGQKNRQYRVNHIML 180
Query: 186 SIPDNKL-QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+P+ +Q +I D + N ++ + G ++ +++
Sbjct: 181 RVPNEADNATMEALQTKIADIQTQLNAGEPFANLALALSAGPKALDGGDWGWMNINEMPT 240
Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ---------NTP 294
F + + + P + G+ I + D R G E L ++A+ +
Sbjct: 241 LFAEAVTNAKKGDIIGPIRSGAGLHIIQVSDMR--GVETVLTKEVNARHILIKPSVILSD 298
Query: 295 TKIEKHEAEYVKKLRS 310
K + EY+ +++S
Sbjct: 299 DKAQSLLNEYLTRIKS 314
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 12/159 (7%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
++ + ++ + +E R +L P L + K E R+ + +
Sbjct: 268 QVSDMRGVETVLTKEVNARHILIK-PSVILSDD----KAQSLLNEYLTRIKSGDAEFAEL 322
Query: 223 ASKIHD-----VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
A D V G+ + + P F+ L + + + + G + + D+R
Sbjct: 323 AKAYSDDTGSAVKGGELGWADPNIYVPAFKLALQDLKKGEISPTFRSSHGWHIVQLIDRR 382
Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ A + + + ++ +L+ A I
Sbjct: 383 TQDTTDKANRQKAWQLLYNRRAAEESQSWLNELKQEAYI 421
>gi|85710398|ref|ZP_01041462.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1]
gi|85687576|gb|EAQ27581.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1]
Length = 448
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 98/284 (34%), Gaps = 17/284 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQKI-------NGELEKIAVQELIVETLKKQEIEKSGIT 96
+NG VIT DI +R+AL+ L ++ LI ETLK Q I
Sbjct: 59 AVVNGFVITGTDIDQRVALVTNASEVEVSDAERQRLRVQVLRNLIDETLKIQAARAQEIG 118
Query: 97 FDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ V + Q A G + E +L G K+ + + W ++++ +
Sbjct: 119 VERAEVEQTYQQLAAQNFGQNPERMDEYLASIGSSPAALKRQIEGEIAWENLIRRNISPF 178
Query: 156 YGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E+ ++++ EY + + + + + +RI + E+
Sbjct: 179 VNVSAEEVTGVLERLEEARGTEEYRLGEIYMNATEENREAVIQNMQRIMEQLEAGGSFV- 237
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273
+F+ V G +L + L + ++ P G I +
Sbjct: 238 --AYARQFSEASTAVQGGDTGFLRLATLPGPMADAARQMQPGQLVGPIAIPGGFTIIYMI 295
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
D+R + + LS + ++ + + +NA I +
Sbjct: 296 DRRQVLTADPRDSVLSLKQISIAFDQGTS----EAEANAKIEEF 335
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 7/181 (3%)
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
A Q +V + + I + + ++ + SI ++ ++
Sbjct: 271 ARQMQPGQLVGPIAIPGGFTIIYMIDRRQVLTADPRDSVLSLKQI--SIAFDQGTSEAEA 328
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNT 257
+I++ ++ + CN+ E A + ++ + L Q QN+L Q T
Sbjct: 329 NAKIEEFGLF-IQSLRSCNEAE-TARSVLGATVVTNDQIQARQLPEQLQNILLNMQVGQT 386
Query: 258 TNPYVT-QKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T P+ + Q+GV + +C + + + +I K Y++ LR++A I
Sbjct: 387 TPPFGSAQEGVRVLMLCGRDEPEDSGTPTFQTVMTNIESERINKRAQRYLRDLRNDAYIE 446
Query: 316 Y 316
Y
Sbjct: 447 Y 447
>gi|227357298|ref|ZP_03841655.1| chaperone SurA protein [Proteus mirabilis ATCC 29906]
gi|227162561|gb|EEI47550.1| chaperone SurA protein [Proteus mirabilis ATCC 29906]
Length = 445
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 93/248 (37%), Gaps = 12/248 (4%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEK 92
R+ +N V+ + D+++ + +++ N L + ++ L+++ + Q ++
Sbjct: 40 RVSAIVNNGVVLESDVNRMLQTVQMNAKNAGQEMPDEQVLRQQILERLVMDNIILQMAQQ 99
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
I V A L+ E L GI N ++Q + + + +V N+
Sbjct: 100 MQIDIPEAAVESTIQGIAAENNLTLEQLKKRLAADGIAYNDYRQDIRKEMMLAEVRNNEV 159
Query: 153 MLKYGNLEMEIP-ANKQKMKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ L E+ KQ + + + +L + +N + +++ + +++L
Sbjct: 160 RRRITILPQEVDSLAKQIESQASQSIDLNLSHILIPLSENPSPAEIEKAQQVVNRIKNQL 219
Query: 211 RLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
+ D KL S + G + +L F L +Q P + G+
Sbjct: 220 KNGADFGKLAATYSADPQALNGGNMGWASIDELPTIFAKQLANAQKGEIVGPLQSGVGLH 279
Query: 269 YIAICDKR 276
I + D R
Sbjct: 280 IIKVNDIR 287
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 6/164 (3%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
G +++ + K ++V E R +L + + N +++
Sbjct: 273 QSGVGLHIIKVNDIRGASKTVSVTEVKARHILLK--SSPIMNDEQAYAKLQKISADIRSG 330
Query: 213 PKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
K S+ ++ + + + P F++ L++ ++N + P + G
Sbjct: 331 KISFADAAKEYSEDPGSALRGGELGWSMPDIYDPAFRDALMRLNKNELSQPVRSNFGWHL 390
Query: 270 IAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
I + D R + A + + K + ++++LR+ A
Sbjct: 391 IELEDTRSVDKTDAANKEQAYRLLFNRKFNEEVQNWMQELRAGA 434
>gi|291616238|ref|YP_003518980.1| SurA [Pantoea ananatis LMG 20103]
gi|291151268|gb|ADD75852.1| SurA [Pantoea ananatis LMG 20103]
gi|327392689|dbj|BAK10111.1| chaperone SurA precursor [Pantoea ananatis AJ13355]
Length = 431
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 99/269 (36%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------E 71
+++ + ++ + + ++ +N V+ + D+ ++ +K Q
Sbjct: 6 MLILGVALSANTAFAAPQVVDKVAAVVNNGVVLESDVDSMMSTVKSQAKQAGQQLPDDKT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ I++ + Q +K+G+ ++ A +S + S L G+
Sbjct: 66 LRHQILEREIMDAIILQLGDKAGLQITDQQLDQAIQNIAAQNRMSVDQLRSRLAYDGMNY 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
N ++ + + + +V N+ + L E+ A + +N E I +L +P+
Sbjct: 126 NTYRAQIRKEMLISEVRNNEVRRRVTILPQEVDTLAQQVGAQNTQGTEMNISHILLPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q Q Q+++ + L+ D KL S G + +L F
Sbjct: 186 NPTQQQVDDQEKLAKQLITELKGGADFGKLAVTYSADSQALKGGNMGWAKIEELPTLFAQ 245
Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 246 ALTTAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 4/149 (2%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + KN++V E R +L P + + K + A + R ++F+
Sbjct: 274 RGESKNVSVTEVHARHILLK-PSPIMTDDQARAKLEQIAADIRSGKTTFAAAAKQFSDDP 332
Query: 227 HDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G + P F++ LL+ + T+ P + G I + D R + A
Sbjct: 333 GSANQGGDLGWTSPEVFDPAFRDALLRLKKGETSQPVHSSFGWHLIQLLDTRQVDKTDAA 392
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R+ A
Sbjct: 393 QKERAYRMLFNRKFAEEAQTWMQEQRAGA 421
>gi|258593267|emb|CBE69606.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [NC10
bacterium 'Dutch sediment']
Length = 351
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 63/322 (19%), Positives = 127/322 (39%), Gaps = 24/322 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-------KRIALLKL 65
L+T +L +F + + RI +N +VIT D+ +RI L
Sbjct: 32 ASLMTVILLLSVFAASGADAV----ILDRIVAVVNDDVITLTDVQEEGIQAIRRIVRETL 87
Query: 66 QKINGEL----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
L E+ + ELI+ L+ QE K I + + + GL S E+
Sbjct: 88 GAERERLLRSTERQILDELILRRLQLQEATKEKIETAPAEIQSAIEELKKRNGLASDEEL 147
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREY 178
+ L ++ + + F++ +A Q + +V K L+ E+ +++ + + ++
Sbjct: 148 RAALSREQLSEEQFRKGIADQVMLTKLVARRVRAKVVVLDEEVQQYYEQRQDQFREIPQF 207
Query: 179 LIRTVLFSIPDNKLQNQGF-VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
IR +L + P + +KRI++A+ + + +++A S G+ +
Sbjct: 208 KIRHLLVATPPQATPGELSRAKKRIEEAQTLLKKGTQFATVAKQYAEGPLASSSGEVWTM 267
Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNT 293
+L P+ Q L + T G I + ++ + L + + L A
Sbjct: 268 KHGELAPELEQAALALPIGQPSGIITTPAGFHLIVVEERVPGQTLSFDQVKER-LRALLF 326
Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315
K E E+++ LR+ A +
Sbjct: 327 EQKTETKFKEWIESLRTKANVE 348
>gi|197286178|ref|YP_002152050.1| peptidyl-prolyl cis-trans isomerase SurA [Proteus mirabilis HI4320]
gi|194683665|emb|CAR44613.1| chaperone SurA protein (peptidyl-prolyl cis-trans isomerase)
[Proteus mirabilis HI4320]
Length = 436
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 93/248 (37%), Gaps = 12/248 (4%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEK 92
R+ +N V+ + D+++ + +++ N L + ++ L+++ + Q ++
Sbjct: 31 RVSAIVNNGVVLESDVNRMLQTVQMNAKNAGQEMPDEQVLRQQILERLVMDNIILQMAQQ 90
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
I V A L+ E L GI N ++Q + + + +V N+
Sbjct: 91 MQIDIPEAAVESTIQGIAAENNLTLEQLKKRLAADGIAYNDYRQDIRKEMMLAEVRNNEV 150
Query: 153 MLKYGNLEMEIP-ANKQKMKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ L E+ KQ + + + +L + +N + +++ + +++L
Sbjct: 151 RRRITILPQEVDSLAKQIESQASQSIDLNLSHILIPLSENPSPAEIEKAQQVVNRIKNQL 210
Query: 211 RLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
+ D KL S + G + +L F L +Q P + G+
Sbjct: 211 KNGADFGKLAATYSADPQALNGGNMGWASIDELPTIFAKQLANAQKGEIVGPLQSGVGLH 270
Query: 269 YIAICDKR 276
I + D R
Sbjct: 271 IIKVNDIR 278
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 6/164 (3%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
G +++ + K ++V E R +L + + N +++
Sbjct: 264 QSGVGLHIIKVNDIRGASKTVSVTEVKARHILLK--SSPIMNDEQAYAKLQKISADIRSG 321
Query: 213 PKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
K S+ ++ + + + P F++ L++ ++N + P + G
Sbjct: 322 KISFADAAKEYSEDPGSALRGGELGWSMPDIYDPAFRDALMRLNKNELSQPVRSNFGWHL 381
Query: 270 IAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
I + D R + A + + K + ++++LR+ A
Sbjct: 382 IELEDTRSVDKTDAANKEQAYRLLFNRKFNEEVQNWMQELRAGA 425
>gi|302877391|ref|YP_003845955.1| SurA domain [Gallionella capsiferriformans ES-2]
gi|302580180|gb|ADL54191.1| SurA domain [Gallionella capsiferriformans ES-2]
Length = 440
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 103/278 (37%), Gaps = 17/278 (6%)
Query: 51 ITDGDISKRIAL----LKLQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
IT ++++R+ + LK Q LE ++ +I E L+ Q +++G+ D +
Sbjct: 49 ITRLELNERLRMVVSQLKKQGTPLPEGAVLETQVLERMIAEMLQAQFAKENGVRVDDTQL 108
Query: 103 NYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ + A+ S +F + L+ G+ F++ + + + + + + K +
Sbjct: 109 DMAITRIAQQNNFPSLVEFMAKLESDGVNVKKFREEIRAEIVSTRLREREVESKLVISDT 168
Query: 162 EIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ + EY + +L +P+ + + D ++L D +++
Sbjct: 169 EVDNYLSNKSKMGLDNDEYHLAHILVVVPEQASAEKIRAARERADQAFAQLSGGADFSQV 228
Query: 220 EKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
S D G + + P F N L+ T + G + + +KR
Sbjct: 229 SAGFSDAKDALKGGDLGWRAGDRIPPAFMNELQNLKPGQNTAVLRSPSGFHILKLVEKRG 288
Query: 278 LGGEIAL----KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + ++ + + E + + +++
Sbjct: 289 GSAPVVITQTHARHILIKTSEIVTEAEAKKQLLEIKQR 326
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 55/152 (36%), Gaps = 3/152 (1%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + + + R +L + + + +K++ + ++ + ++++
Sbjct: 286 KRGGSAPVVITQTHARHILIKTSE--IVTEAEAKKQLLEIKQRIDGGAGFAEQAKRYSQD 343
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
G +L P+F+ + K Q TQ G I + +R+ E
Sbjct: 344 GSAQQGGDLDWLSPGQTVPEFEGAINKLQVGQMGMVQTQFGWHLIQVLARRNTDVSEQQK 403
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K E+ +++++LR A + Y
Sbjct: 404 RQQARVSIGTFKSEELYQDWLRQLRDRAFVEY 435
>gi|238755738|ref|ZP_04617071.1| Chaperone surA [Yersinia ruckeri ATCC 29473]
gi|238706030|gb|EEP98414.1| Chaperone surA [Yersinia ruckeri ATCC 29473]
Length = 433
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 4/211 (1%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L ++ LI++ ++ Q +K GIT ++ A ++ + S L +G+
Sbjct: 64 ATLRHQILERLIMDNIQLQMAQKMGITVSDEALDKAIADIAAQNRMTTDQMRSRLAAEGL 123
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSI 187
+ ++ + + + +V N+ + L E+ A + + E + +L +
Sbjct: 124 NYSTYRAQIRKEMLTSEVRNNEVRRRVNILPQEVESLAKQISAQTGDDAELNLSHILIPL 183
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF 246
P+N Q Q + + + L+ D KL S G+ + +L F
Sbjct: 184 PENPSQQQVDTAEDLAKNLVAELKKGADFGKLAIANSADSQALKGGQMGWGKLQELPTLF 243
Query: 247 QNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
LK + + + P + G + + D R
Sbjct: 244 AERLKTTSKGDIVGPIRSGVGFHILKVNDIR 274
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/342 (12%), Positives = 104/342 (30%), Gaps = 68/342 (19%)
Query: 36 WAMSSRIRTTINGEV----ITDGDISKRIALLKLQKIN-------GELEKIAVQELIVET 84
M+ ++ T++ E I D R+ +++ +E++
Sbjct: 81 LQMAQKMGITVSDEALDKAIADIAAQNRMTTDQMRSRLAAEGLNYSTYRAQIRKEMLTSE 140
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFL---------DKQGIGDNHF 134
++ E+ + + V Q + TG AE + S L + ++
Sbjct: 141 VRNNEVRRR-VNILPQEVESLAKQISAQTGDDAELNLSHILIPLPENPSQQQVDTAEDLA 199
Query: 135 KQYLA------------------------IQSIWPDV------------------VKNDF 152
K +A Q W + +
Sbjct: 200 KNLVAELKKGADFGKLAIANSADSQALKGGQMGWGKLQELPTLFAERLKTTSKGDIVGPI 259
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
G +++ + + K+I+V E R +L P + + K A + +
Sbjct: 260 RSGVGFHILKVNDIRGENKSISVTEVHARHILLK-PSVVMTDDQARAKLQAAANDIKNGK 318
Query: 213 PKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
++ ++ + + G + P F++ LLK + + P + G I
Sbjct: 319 VTFADEAKRLSEDSGSAIQGGDLGWASPDIYDPAFRDALLKLKKGEISAPVHSSFGWHLI 378
Query: 271 AICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSN 311
+ D R + A + + + K + ++++ R+
Sbjct: 379 QLLDTRQVDRTDAAQKDRAYRMLFNRKFAEEAQTWMQEQRAA 420
>gi|328952685|ref|YP_004370019.1| SurA domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328453009|gb|AEB08838.1| SurA domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 316
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 113/311 (36%), Gaps = 11/311 (3%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------K 67
L + + + + I +N EVIT ++ + + ++ K
Sbjct: 2 RLIASLLFCACLAILPDGMAAAKIVDEIVAQVNDEVITLSELEQAMKYIQANPAAGAKVK 61
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDK 126
N + A++ LI L K+E ++ GIT + + G + ++ S L K
Sbjct: 62 NNQAFRRQALEMLIDRKLAKEEAKRYGITVPEKEIKKTVDDIKQKYGFTDDETLSKALAK 121
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G+ +Q L Q ++ + K + EI ++ I+ +
Sbjct: 122 DGMTMEQLRQQLIEQIQQDRLMLSTVRSKVKVSDAEIQQFYEQRYRQADNRVHIKIINLP 181
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL-EKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + + + R + +KL E ++ +V G Y+ +SD+ P+
Sbjct: 182 VAAGSSAEEQEEVRALAERILIQARRGESFDKLMETYSKSTPNVPGGDLGYIRQSDIDPR 241
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAE 303
F L + P G + I + D + + +A + ++ K +E
Sbjct: 242 FFEFLSNLRPGEIVPLRAPFGFQIIKMVDAKVGKAKSLSEARGEIEQILIREQMAKLFSE 301
Query: 304 YVKKLRSNAII 314
Y++ +R A I
Sbjct: 302 YLQSIRQKAHI 312
>gi|254480950|ref|ZP_05094196.1| SurA N-terminal domain family protein [marine gamma proteobacterium
HTCC2148]
gi|214038745|gb|EEB79406.1| SurA N-terminal domain family protein [marine gamma proteobacterium
HTCC2148]
Length = 425
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 111/313 (35%), Gaps = 14/313 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKING 70
IK + L + ++ M ++ + ++I ++ +R+ + +
Sbjct: 3 IKAMLLGTCLTASALATGLARAETQMLDQVIAVVEDDIIMASELRERMTSVTENISTRGV 62
Query: 71 E------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
E L + + LI+E+++ Q+ + G+ +N + A GLS + F L
Sbjct: 63 EMPPEDVLIRETLDRLILESIQMQKGARVGVRISDTQLNGAMQRVAAQNGLSLDQFRMAL 122
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
++QG ++ + + I V + + + E E+ ++ + +T EY I
Sbjct: 123 EQQGQSYQVMREQIRKELIIQRVQQGNVNQRIEITEQEVENFLATEEGQKLTQPEYQIMH 182
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
L ++ + + + +++ A ++ + G + DL
Sbjct: 183 ALLAVSPGAPAAEVERAEAYVTRLLEEISAGAPFDEVVS-APGPYNFTGGNLGWRKLDDL 241
Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEK 299
F ++ T + G + + D+R ++ ++ + + +
Sbjct: 242 PSLFSDVAPGLSKGKTTLVKSDSGFHLVHMADRRGGENMMVSQTKVRHILVKPSEIMTDG 301
Query: 300 HEAEYVKKLRSNA 312
V L++ A
Sbjct: 302 QAKALVTSLKARA 314
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 107/307 (34%), Gaps = 58/307 (18%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R+AL + + + + +ELI++ +++ + + I V F L+
Sbjct: 119 RMALEQQGQSYQVMREQIRKELIIQRVQQGNVNQR-IEITEQEVENFLATEEGQ-KLTQP 176
Query: 119 DF--------------SSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------D 151
++ ++ +++ + ++ + + +VV
Sbjct: 177 EYQIMHALLAVSPGAPAAEVERAEAYVTRLLEEISAGAPFDEVVSAPGPYNFTGGNLGWR 236
Query: 152 FMLKYGNLEMEIP----------------------ANKQKMKNITVREYLIRTVLFSIPD 189
+ +L ++ A+++ +N+ V + +R +L +
Sbjct: 237 KLDDLPSLFSDVAPGLSKGKTTLVKSDSGFHLVHMADRRGGENMMVSQTKVRHILVKPSE 296
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
Q K + + ++R +D L + S+ + G + + P+F+
Sbjct: 297 IMTDGQA---KALVTSLKARAEDGEDFADLAREYSEDIGSAQEGGDLGWTDPGQMVPEFE 353
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYV 305
++ + ++P +Q G + + D+RD + A K K ++ ++
Sbjct: 354 QTMQITAVGEISDPVKSQFGWHVLEVLDRRDEDMTDTATKNMAMNYLHNRKYQEELDAWL 413
Query: 306 KKLRSNA 312
+++R A
Sbjct: 414 RQIRDEA 420
>gi|241765841|ref|ZP_04763778.1| SurA domain protein [Acidovorax delafieldii 2AN]
gi|241364240|gb|EER59412.1| SurA domain protein [Acidovorax delafieldii 2AN]
Length = 466
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 102/305 (33%), Gaps = 18/305 (5%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIA 76
+ + + + + I +N E +T+ ++ R ++ Q L +
Sbjct: 46 YTLPAPGTGSALRSADFIVAVVNSEPVTNNEVRARAVRVEQQMAQQGSPLPPRDLLAREV 105
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ LIVE ++ Q + GI D V A+ +S ++ L GI F++
Sbjct: 106 LERLIVEKIQLQLAREGGIRVDDYAVGQAEESVAKQNRVSVDEMHRRLAADGISKERFRE 165
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKLQ 193
L Q + + + D + ++++ +Q + + E + +L +P+N
Sbjct: 166 ELRNQLLLLRLRERDVQSRVRVSDLDVDQYLREQQAGADASKLEINLGHILVVVPENATP 225
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLK 251
Q ++ ++R +D + + S + S G F +
Sbjct: 226 QQVEERRVRAQQAADKVRAGEDFAAVAREFSDAAEAKTSGGLLGLRPADRYPELFVSATA 285
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYVK 306
+ P + G + + DK G ++ + P E A +
Sbjct: 286 QLPLGGIAGPVRSPAGFHVLKLVDKTSAGVPTVAIQSHARHILLRTGPQLTESAAAARLA 345
Query: 307 KLRSN 311
R
Sbjct: 346 DYRRR 350
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 5/148 (3%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS- 230
+ R +L + R+ D L D +L + S+
Sbjct: 316 PTVAIQSHARHILLRT--GPQLTESAAAARLADYRRRVLAGQADFAELAREHSQDGSAKQ 373
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL- 288
G + P+F+ + + + P V++ GV I + ++R+ + +
Sbjct: 374 GGDLGWSNPGRYVPEFEQAMNALKPGDVSEPLVSRFGVHLIQLLERRETKLTQREQRDMA 433
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K+E+ A ++++LR A + Y
Sbjct: 434 RDTVREKKVEEAFANWMQELRGRAYVEY 461
>gi|312797257|ref|YP_004030179.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI
454]
gi|312169032|emb|CBW76035.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia
rhizoxinica HKI 454]
Length = 512
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 115/305 (37%), Gaps = 22/305 (7%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEK------IAVQEL 80
++S+++ RI +N +VIT ++ R+ L+ +LQ+ L + ++
Sbjct: 92 ALLSHQAGQEVDRIVAVVNNDVITRRELDLRMGLITRRLQQQGAPLPSPDQLQLQVLNQM 151
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
++E ++ Q ++ GI D T+ + + A+ +S + + + L+ +G+ + F
Sbjct: 152 VLERIQLQRAKEDGIVVDDATLQHTLARLAQANNMSLDMYRARLEAEGVPWSVFSADARN 211
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + + + + + E+ A+++ ++ +L N Q +
Sbjct: 212 ELLLSKLREKEVDSRITVSDAEVANYIASQRGPMQRVQQDLRFEHILIKAALNAPQTEIE 271
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQN 255
++ R ++ +L K S+ D S G + S L Q +
Sbjct: 272 AARQKASELLKRALASENFARLAKDNSQAPDASKGGDLGFRSTSALPEAMTQAASQLRPG 331
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGE--------IALKAYLSAQNTPTKIEKHEAEYVK 306
T +G E + + D+R G ++ + + E + +
Sbjct: 332 QVNPEVLRTPEGFEIVRLVDRRVSSGMGSEAPRLVQTHARHILIRIGEGQPEPAARQKLV 391
Query: 307 KLRSN 311
+LR
Sbjct: 392 ELREQ 396
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 72/183 (39%), Gaps = 4/183 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P+V++ + L ++ + + + R +L I + + +
Sbjct: 326 SQLRPGQVNPEVLRTPEGFEIVRLVDRRVSSGMGSEAPRLVQTHARHILIRIGEGQPEPA 385
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
++++ + E N ++ G ++ + P+F+ + +
Sbjct: 386 A--RQKLVELREQIEAGGDFANFAHTYSQDGSASQGGDLGWISPGETVPEFERAMNNLKD 443
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + +R+ G +A + ++ Q K E+ A+++++LR +A
Sbjct: 444 GEISQPIRTEYGYHLIQVMGRREAQGSVAQQQEIARQAIGQRKAEQAYADWLRQLRDSAY 503
Query: 314 IHY 316
+ Y
Sbjct: 504 VQY 506
>gi|227114234|ref|ZP_03827890.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 431
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 96/268 (35%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+++ + ++ + + ++ ++ V+ + D++ + +KL L
Sbjct: 7 LILGLALSASTAFAAPQVVDKVAAVVDNSVVLESDVNSLLQSVKLNAQQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
LI++ + Q +K GI +N A +S + S L +G+ N
Sbjct: 67 RHQITDRLIMDNIILQMAQKMGIQVTDEQLNQAITNIAAQNRMSLDQLKSQLAYEGLNYN 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDN 190
++ + + + +V N+ + L E+ A + + E + +L + +N
Sbjct: 127 TYRNQIRKEMLISEVRNNEVRRRITVLPQEVDTLAKQIATQTGENDELNLSHILIPLSEN 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL 249
Q Q + + + ++ D KL S G+ + ++ F
Sbjct: 187 PTQQQVDEAENLATSLVKQINEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAER 246
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
L ++Q P + G + + D R
Sbjct: 247 LTQAQKGQVVGPIRSGVGFHILKVNDIR 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/345 (15%), Positives = 110/345 (31%), Gaps = 70/345 (20%)
Query: 35 SWAMSSRIRTTINGE----VITDGDISKRIALLKLQKING-------ELEKIAVQELIVE 83
M+ ++ + E IT+ R++L +L+ +E+++
Sbjct: 80 ILQMAQKMGIQVTDEQLNQAITNIAAQNRMSLDQLKSQLAYEGLNYNTYRNQIRKEMLIS 139
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNT------GLS-----------------AEDF 120
++ E+ + IT V+ Q A T LS AE+
Sbjct: 140 EVRNNEVRRR-ITVLPQEVDTLAKQIATQTGENDELNLSHILIPLSENPTQQQVDEAENL 198
Query: 121 SSFLDKQ----------GIGDNHFKQYLAI-QSIWPDV------------------VKND 151
++ L KQ I + Q L Q W + V
Sbjct: 199 ATSLVKQINEGADFGKLAITYSADSQALKGGQMGWGKLQEIPTLFAERLTQAQKGQVVGP 258
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
G +++ + K+++V E R +L I + + Q ++ + +
Sbjct: 259 IRSGVGFHILKVNDIRGGNKSVSVTETHARHIL--IKPSVVMTDSQAQAKLAEVAQQIKN 316
Query: 212 LPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
D K S+ + G + P F++ LLK + + P + G
Sbjct: 317 GSTDFASQAKLLSQDPGSANQGGDLGWASPDMYDPAFRDALLKLKKGEISQPVHSSFGWH 376
Query: 269 YIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
I + D R + A + + + K + ++++ R+ A
Sbjct: 377 LIQLLDTRQVDKTDAAQKEQAYRMIFNRKFAEEAQTWMQEQRAAA 421
>gi|99035882|ref|ZP_01314934.1| hypothetical protein Wendoof_01000229 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 413
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALL-----KLQKINGELEKIAVQELIVETLKKQEIE 91
A I +NGE I++ DI KRI + E + ++ELI E + E +
Sbjct: 50 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIIIINEAQ 109
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ I + ++ + + L A + +++K I ++ + Q +W +++
Sbjct: 110 RLNIKLSNEELDNAIMLFLTQSFKLKANEVDQYIEKHNIDLGILRKQIKCQLLWSKIIEV 169
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK------LQNQGFVQKRIKD 204
+ + E+ K++ + +YLI F IPD K + + R D
Sbjct: 170 RIVPFINISDKEVDDVKRQTEKP---DYLITFQEFIIPDQKDKDVYGIAEDLVKKLRNSD 226
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIG 232
ES +++ K L + K+ V G
Sbjct: 227 NPESPIKMRKATVNLSQLKGKLKSVLEG 254
>gi|114778682|ref|ZP_01453494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mariprofundus
ferrooxydans PV-1]
gi|114551044|gb|EAU53606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mariprofundus
ferrooxydans PV-1]
Length = 570
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 96/256 (37%), Gaps = 15/256 (5%)
Query: 36 WAMSSR---IRTTINGEVITDGDISKRIALLKLQKING---------ELEKIAVQELIVE 83
A + I +N E IT + + ++ Q EL + ++ LIV+
Sbjct: 16 PAQAEEFDSIAAVVNNEAITCSQVDQDAQIMLTQLHQSGSTFIPAASELNQRSLDGLIVK 75
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
TL+KQE K + ++ A + L+ + + +++QG+ + ++ L Q +
Sbjct: 76 TLQKQEARKLELKVSDEELDDAIKNVAASNNLTPDQLKAAVEQQGMHYDEYRSNLREQIL 135
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+V K E + +K RE + + S+P Q V ++
Sbjct: 136 KNKLVNVAVRSKIQVSEEAVQEYYRKYLEHPKPRREVKLAQLFLSLPSEPTPEQLAVTRQ 195
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
+L KD ++ S+ D G + ++ + +F + L+ ++P
Sbjct: 196 KIRNIHQQLLAGKDFAQMVAIYSESPDRQQQGVMGWFMQGGVAQRFASALEMPVGQISDP 255
Query: 261 YVTQKGVEYIAICDKR 276
+ G + + +R
Sbjct: 256 IRSPSGFHILKVLAER 271
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 6/150 (4%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC---NKLEKFASKIHD 228
++ E R +L +P ++ +A L+ D + ++ +
Sbjct: 279 GVSYDEVHARHILLKVPSYADAATKAKIRQRAEAISHDLQGASDAQFAVRAKEDSQGPSA 338
Query: 229 VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALK 285
G + + + P F+ T+ P + G I I +R + A +
Sbjct: 339 ERGGDLGWFKKGAMVPAFEKAAFAMKPGETSGPVESPFGFHIIRIVARRHIDPNSLQAHR 398
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ T + ++ ++ LR+ A I
Sbjct: 399 DQIQQILTNVETQEQLPRWIASLRAEANID 428
>gi|300715281|ref|YP_003740084.1| hypothetical protein EbC_06930 [Erwinia billingiae Eb661]
gi|299061117|emb|CAX58224.1| uncharacterized protein [Erwinia billingiae Eb661]
Length = 431
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 99/269 (36%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------E 71
+++ + ++ + + ++ +N V+ + D+ + +K Q
Sbjct: 6 MLILGAALTASTAFAAPQVVDKVAAVVNNGVVLESDVDGMMQSVKSQAQQAGQQLPDDKT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L V+ L+++ + Q ++SGI ++ A ++ + S L G+
Sbjct: 66 LRHQIVERLVMDNILLQMAKQSGIQVTDAQLDGAIQNIAAQNKMTPDQLRSRLAYDGMNY 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
+++ + + +V N+ + L E+ + + +N E + +L +P+
Sbjct: 126 GTYREQIRREMTISEVRNNEVRRRVTILPQEVDSLSKQVASQNNASTELNLSHILLPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF-Q 247
N Q Q Q+ + S+ + D KL S G + +L F Q
Sbjct: 186 NPTQQQVDDQETLAKQLVSQSKSGADFGKLAITYSADPQALKGGNMGWGKIQELPSLFAQ 245
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L+ + + P + G + + D R
Sbjct: 246 ALVTAKKGDIIGPIRSGVGFHILKVNDVR 274
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 106/357 (29%), Gaps = 61/357 (17%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
++ L +L+ + + I+ +T + R+A + G
Sbjct: 70 IVERLVMDNILLQMAKQSGIQVTDAQLDGAIQNIAAQNKMTPDQLRSRLAYDGM--NYGT 127
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFL------ 124
+ +E+ + ++ E+ + +T V+ Q A S E + S L
Sbjct: 128 YREQIRREMTISEVRNNEVRRR-VTILPQEVDSLSKQVASQNNASTELNLSHILLPLPEN 186
Query: 125 --DKQGIGDNHFKQYLAIQ-------------------------SIWPD----------- 146
+Q + L Q W
Sbjct: 187 PTQQQVDDQETLAKQLVSQSKSGADFGKLAITYSADPQALKGGNMGWGKIQELPSLFAQA 246
Query: 147 VVKNDFMLKYGNLEM-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+V G + ++ + + +N++V E R +L + + +
Sbjct: 247 LVTAKKGDIIGPIRSGVGFHILKVNDVRGESQNVSVTEVHARHILLK--PSPVMTDEQAR 304
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNN 256
++++ + K S+ + G + P F++ L+K +
Sbjct: 305 QKLEQVVADINSGKTTFAEEAKQLSQDPGSANQGGDLGWSSPEMYDPAFRDALMKLKKGQ 364
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R + A + + + K + ++++ R+ A
Sbjct: 365 LSAPVHSSFGWHLIQLLDTRQVDKTDAAQKERAYRLLFNRKFAEEAQTWMQEQRAAA 421
>gi|221069847|ref|ZP_03545952.1| SurA domain protein [Comamonas testosteroni KF-1]
gi|220714870|gb|EED70238.1| SurA domain protein [Comamonas testosteroni KF-1]
Length = 475
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 97/265 (36%), Gaps = 18/265 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALL--------KLQKINGELEKIAVQELIVE 83
+ + + I +N E IT+ ++ R+A + EL + ++ LIVE
Sbjct: 62 AAQGVRSADYIVAVVNSEPITNNEVRARMARVAQNVTEQGGQLPSQSELARQVLERLIVE 121
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
++ QE +GI D+ V+ AR S L +GI + F+ + Q +
Sbjct: 122 RVQLQEARDTGINVDNLAVDQAVANVARQNSTDRAGLVSRLKAEGISEAQFRAEIRSQML 181
Query: 144 WPDV----VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
V V + +++ + K+ + + +L ++P+N + V+
Sbjct: 182 MQRVRERDVDGRVKVTEADIDRYLKEQKRPGEAAAGAAANLGHILITVPENA--SPAVVE 239
Query: 200 KRIKDAEESRLRL---PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255
+R A+++ P + +F+ + G SD F + +
Sbjct: 240 EREARAKQAAEAARKNPDFIAAVREFSDVPNGQGGGAMGMRAMSDYPELFVQQVGNAAVG 299
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGG 280
P+ + G + + +K G
Sbjct: 300 AIVGPFRSGAGFHVLKVLEKSQSGA 324
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 5/168 (2%)
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F G +++ Q + + + R +L ++ + + KR++D +
Sbjct: 305 FRSGAGFHVLKVLEKSQSGAPVYITQNHARHILLTVGEG--MTEAQAAKRLEDYKRRVEA 362
Query: 212 LPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
+L + SK + G + P+F+ +L +NP V++ GV
Sbjct: 363 GQATFQQLAQEFSKDGSARNGGDLGWSSPGQFVPEFERVLDSLQPGQISNPVVSRFGVHL 422
Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + ++R E + + K E+ ++K+LR A + Y
Sbjct: 423 IQLIERRQEKLTEREQREMVRNVVRERKAEQDYETWLKELRGKAFVEY 470
>gi|319786209|ref|YP_004145684.1| SurA domain [Pseudoxanthomonas suwonensis 11-1]
gi|317464721|gb|ADV26453.1| SurA domain [Pseudoxanthomonas suwonensis 11-1]
Length = 442
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/321 (14%), Positives = 108/321 (33%), Gaps = 26/321 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQKI 68
+ L+ F+ + V+ + A RI + +VI ++ + + Q
Sbjct: 3 RRLSAIFLAASALLSLPVAGVAQAQQQLQPVERIAAIVEEDVILQSELDLALRNVMAQYA 62
Query: 69 NGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
E LE+ ++ L++ L+ + GI VN A+ GL+ +
Sbjct: 63 GRESQLPPRPVLERQVLERLVLTRLQVARARQQGIRVSEQEVNQAVAMIAQQNGLTLDGL 122
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L G+ F++ L + + + F+ + E EI A + + R+Y +
Sbjct: 123 RQRLASDGLSFEEFRRSLNEEITVQRL-RQGFIQRINVSEGEIDAALAREATGS-RQYRL 180
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+L ++PD Q +R + +++ + + G +
Sbjct: 181 AHILVALPDGATAEQITTGQRKVEGILNVINKGEMDFAAAAVRYSDSPNALEGGDLGWRS 240
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-------AYLSA 290
++ F Q +L+ P G + + + + RD + + ++
Sbjct: 241 LDEIPSAFAQQILQLQPGEIFGPVRGPSGFQLLRLTEVRD-SAQAPAQTVTEYHVRHILV 299
Query: 291 QNTPTKIEKHEAEYVKKLRSN 311
+ + + LR+
Sbjct: 300 RVNDRQDAATARAKIDTLRAR 320
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-- 231
TV EY +R +L + D + + D +R+ D ++ + AS+ +
Sbjct: 288 TVTEYHVRHILVRVND---RQDAATARAKIDTLRARIAGGADFQEVAREASEDNSTRGQG 344
Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLS 289
G + P+F + + + P+ T G I +R+ + +A +
Sbjct: 345 GDLGWFPADAYGPEFGGQVTALEDGQVSQPFRTDAGWHIIERVARRETDVTDDNRRAQIR 404
Query: 290 AQNTPTKIEKHEAEYVKKLRSNA 312
K+E+ Y++++R A
Sbjct: 405 DTIGRRKLEEEYERYLQEMRGEA 427
>gi|209693973|ref|YP_002261901.1| chaperone SurA precursor [Aliivibrio salmonicida LFI1238]
gi|208007924|emb|CAQ78055.1| chaperone SurA precursor [Aliivibrio salmonicida LFI1238]
Length = 436
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 98/275 (35%), Gaps = 11/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K F+ + ++ I + + R+ ++ V+ DI + +K+
Sbjct: 1 MKNWKIPFISSLLLMLTINVHAAPVELDRVIAIVDEGVVLQSDIETSLKTVKINAQEKGQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++T++ Q+ EK GI D + A++ ++
Sbjct: 61 PLPEENVLREQVLEKLILDTIQSQQAEKMGIRIDDTRLEEALNNIAKDNKMTLAQLQQKA 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
QG+ F++ + + + + L E+ A + +Y I
Sbjct: 121 ASQGLAYADFREQIRKEIAASEARNAQVRRRINILPQEVESLALLLSEETQATVQYKISH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ + ++K+ + E + ++ + G ++ + ++
Sbjct: 181 IQLRTDGATQAEKEALEKQALELTERLKQGADFATMAYTYSKGPKALQGGDWGWMRKEEM 240
Query: 243 HPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
F + + + +++ P+ + G I I D +
Sbjct: 241 PTIFADQITGQGKSSIIGPFRSGVGFHIIKIDDVK 275
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 65/189 (34%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS--IP 188
F + Q + F G ++I K ++ + V E R +L +
Sbjct: 241 PTIFADQITGQG--KSSIIGPFRSGVGFHIIKIDDVK-GLETVAVTEVNARHILVKTSVI 297
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ + + + D E + + + + G+ + P+F++
Sbjct: 298 MSDEGAERLLNQITSDIESGKETFAAMAQRYSQDPGSA--AANGELGFQTPDLYVPEFKH 355
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + ++R + + A+K K + +++
Sbjct: 356 QVEILPVGQISKPFKTVHGWHIAEVLERRQVDRTDAAMKNKAYRILMNRKFNEESGAWLQ 415
Query: 307 KLRSNAIIH 315
++R++A +
Sbjct: 416 EIRASAYVE 424
>gi|144897576|emb|CAM74440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 421
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 101/283 (35%), Gaps = 16/283 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKL------- 65
+ + VL ++ S A + R+ IN E I+ D+ R+ L +
Sbjct: 1 MFSRIVLTCATAALALTLWSGAQAQMLDRVVAVINDEAISYRDVEARVRLALVSSNIPDS 60
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
Q+ + ++++I E L+ QE ++ I + V+ + + + S L
Sbjct: 61 QEARQRVVPQVLRKMIDERLQLQEAQRLSIVLSNADVDGAIATIEQQSRMPRGALLSNLA 120
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVL 184
+QG+ ++ + W +V + E E+ Q + + RE +
Sbjct: 121 RQGVDPARVREQIRADLTWMRLVTRVIGPQIRIGEEEVNDRLQSLADRQGLREVRAAEIF 180
Query: 185 FSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ ++ + +R+++ +F+ + G ++ + +
Sbjct: 181 LPVESPDQEAEARAMGERLQEGLRQGTSFQSL---ARQFSRSPTSSNGGLLGWVSQGMVD 237
Query: 244 PQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+ +L+ + T+ T G + + + R +G + +
Sbjct: 238 DEVAAVLETLDRGQTSQLVRTSTGFYLLQVLETRIIGQSVNAE 280
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 43/325 (13%), Positives = 96/325 (29%), Gaps = 54/325 (16%)
Query: 44 TTINGEVITDGDISKRI---ALLKLQKINGELEKIAVQELIVETLKKQEIEKS---GITF 97
++G I + R+ ALL G +++ + + + + I
Sbjct: 95 ADVDG-AIATIEQQSRMPRGALLSNLARQGVDPARVREQIRADLTWMRLVTRVIGPQIRI 153
Query: 98 DSNTVNYFFVQHARNTGL-------------SAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
VN A GL S + + +Q + QS+
Sbjct: 154 GEEEVNDRLQSLADRQGLREVRAAEIFLPVESPDQEAEARAMGERLQEGLRQGTSFQSLA 213
Query: 145 PDVVKNDFMLKYG--------NLEMEIPANKQKMKNITVRE--------YLIRTVLFSIP 188
++ G ++ E+ A + + + YL++ + I
Sbjct: 214 RQFSRSPTSSNGGLLGWVSQGMVDDEVAAVLETLDRGQTSQLVRTSTGFYLLQVLETRII 273
Query: 189 DN----------------KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ + + + + R K C + + A+K
Sbjct: 274 GQSVNAEDSTVTVARMTLPVPAGAPPKADLMERAFALTRNAKSCAEFDALATKAGAPLPP 333
Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSA 290
+ + +L P+ + ++ + N P T +G+ +C ++D A +
Sbjct: 334 RQGPVRIGELPPELKGMVAGMAANQVGVPMDTPQGIMVPMVCSRQDAMVVSPPTAEQVRR 393
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
Q + + Y++ LR A I
Sbjct: 394 QIEDERRDMLSRRYLRNLRRAAFID 418
>gi|83312815|ref|YP_423079.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magneticum AMB-1]
gi|82947656|dbj|BAE52520.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magneticum AMB-1]
Length = 421
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 93/269 (34%), Gaps = 11/269 (4%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEK- 74
+ + + + RI +N E+I+ D+ R+ L + + + +E
Sbjct: 5 AAIVLSALLVACIPLRPSAAQEVDRIAAVVNDEIISIRDLDARLKLAITVSGLPDNIESR 64
Query: 75 -----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+++++ E ++ QE + + ++ V + L K G+
Sbjct: 65 RRAVPQVLRKMVDERVQAQEAARLRVAAGADEVARGVANVENQNRMPPGSLLPSLAKAGV 124
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIP 188
+ K + IW ++ E EI + + + E+++ + +
Sbjct: 125 DPDAVKDQIKADIIWVKLIMRTLQPTIRVGEDEITERIETLRQQFGQPEFMLAEIFLPV- 183
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
D+ Q + + + E+ R P +F+ + G +L + L +
Sbjct: 184 DSPRQEEESKRLGERLIEQLRAGAP-FQALARQFSQSGTANNGGVLGWLSAAALEDDIRE 242
Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ + + + T G +A+ DKR
Sbjct: 243 TVSRLDKGQVSGLVRTGTGYAILALIDKR 271
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 55/157 (35%), Gaps = 8/157 (5%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
I N++ + I V F +P + K + R C++++
Sbjct: 268 IDKRVAGESNVSDPKLNISQVFFPVPPGSPPISQLMAKAAELTANVR-----SCDEMDDL 322
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRD--LG 279
K++ G+ + S L +++ + + P K + + +C + +
Sbjct: 323 GRKLNSEQSGRRDGVTLSVLPQNIRSVASSLPLHKASAPINMGKALLVLMVCSRDENVSK 382
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G + + + ++E Y++ LR A I +
Sbjct: 383 GGLPSREAMRRTIEEERLEMLAKRYLRDLRRAAFIDF 419
>gi|254468048|ref|ZP_05081454.1| chaperone SurA, putative [beta proteobacterium KB13]
gi|207086858|gb|EDZ64141.1| chaperone SurA, putative [beta proteobacterium KB13]
Length = 428
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 14/273 (5%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQ 66
++ IK++ +L+ F V S+ RI +N +VIT D+++ + ALL Q
Sbjct: 2 INYLIKIIFFLCLLVNFSFV-----SSYQELDRIVAIVNKDVITHNDLTEGVDKALLFFQ 56
Query: 67 KINGEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ + E EK + ELI + + + E I ++ ++ ++
Sbjct: 57 QNSIEPPEESIIEKKVLDELIEQKIIEGYAEDWNIKASQEDIDSLIQNILSANQITLDEL 116
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
S L +QG + + L+ + I V + K E EI +K+KM I + +
Sbjct: 117 KSNLKQQGSSYDKLLKSLSYEIILKKVKNREISSKLNISEYEIKKHKEKMAKIRPDVFDL 176
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L + ++++ + +L+ +F+ G L +S
Sbjct: 177 SHILIKFSSEPTAEEKKEKRKLGEEIFDKLKTDDFAKIAYEFSDSPDANEGGSLGKLKQS 236
Query: 241 DLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+L F + L S + P+ + G+ I I
Sbjct: 237 ELPEIFIDKLNNLSAGEYSTPFESNNGIHIIKI 269
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 51/143 (35%), Gaps = 4/143 (2%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+++Y I+ ++ + ++ + + E +K++ + G+
Sbjct: 285 IKKYFIKHIVLKTSEVASEDDVIKKLKRYKNEIDSG--ADFSVIAKKYSEDFSAANGGEI 342
Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQN 292
++ E L +F L QN + P+ T G I D + + + + +
Sbjct: 343 GWINEGLLDQEFDKQLSIIDQNEVSQPFKTDLGWHIIQYTDSKFEDLASENIDNKIKYEL 402
Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315
+ E ++ L+S + I
Sbjct: 403 INERTELLYQDWFSALKSESFIE 425
>gi|121611714|ref|YP_999521.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
gi|121556354|gb|ABM60503.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
Length = 482
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/297 (16%), Positives = 103/297 (34%), Gaps = 19/297 (6%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELEK----IAVQELIVETL 85
+ + I +N E +T+ ++ R+ A + Q + + ++ LI+E +
Sbjct: 69 SATGWADFIVAVVNSEPVTNNEVRSRLVRAEAQIARQGASMPSREWLAHEVLERLILERV 128
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ +SGI D + AR G++ E F + L++ GIG F+ L Q +
Sbjct: 129 QLQQARESGIRVDDFALAQAEQGVARQNGMTLEQFYARLERDGIGKERFRAELRDQLLEQ 188
Query: 146 DV----VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ V + +++ + A E + VL +P++ Q ++
Sbjct: 189 RLREREVDARVQVSEQDIDQYLHAEPPAGAQAKPMEINLGHVLVLVPEDATPAQVAERRA 248
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
RLR D + + S + + G F + + +
Sbjct: 249 RAQQAAERLRSGADFATVAREFSDAPEGQRAGGMLGLRPVDRYPELFVSSTRGLPVGSLV 308
Query: 259 NPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P + G + + + + + ++ + P E AE + R
Sbjct: 309 GPVRSPAGFHLLKVEQRVIAGQPATVLQSHARHILLRTGPRMSETAAAERLADYRRR 365
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 6/158 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + TV + R +L ++ +R+ D L D L +
Sbjct: 322 VEQRVIAGQPATVLQSHARHILLRT--GPRMSETAAAERLADYRRRVLAGQADFAALARE 379
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G + P+F+ L+ + + P VT+ GV I + ++R
Sbjct: 380 HSQDDGSAKKGGDLGWANPGQYVPEFEQALQALQPGDISAPLVTRFGVHLIELLERRQAS 439
Query: 280 GEIALKAYLSAQNT-PTKIEKHEAEYVKKLRSNAIIHY 316
+ ++ Q K+++ + + LR+ A + Y
Sbjct: 440 LTAREQRDMARQAVREKKLDQAYISWTQDLRARAYVEY 477
>gi|117921645|ref|YP_870837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
ANA-3]
gi|117613977|gb|ABK49431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
ANA-3]
Length = 434
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 111/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR ++ +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ + +++ L + ++ + + EI +Q MK++ EY
Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + +A RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPSSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ + + P + G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + L + S+
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKF----EDLARQYSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ + S P+F L S + + P+ T G + ++R
Sbjct: 332 DPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTHGWHITQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R++A I +
Sbjct: 392 QFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427
>gi|308051066|ref|YP_003914632.1| peptidylprolyl isomerase [Ferrimonas balearica DSM 9799]
gi|307633256|gb|ADN77558.1| Peptidylprolyl isomerase [Ferrimonas balearica DSM 9799]
Length = 428
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 102/307 (33%), Gaps = 18/307 (5%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------ALLKLQKI 68
+L + + ++ + + +N VI +I +R+ AL Q++
Sbjct: 2 ILRQLLMGAMAALMFGQALAQPQPLDEVAVLVNDGVILKSEIDERMTSVKRGALQAGQQL 61
Query: 69 NGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ L + LI E+L+ Q E+ G+ ++ AR G++ + ++
Sbjct: 62 PSDAALRTQVIDRLIAESLQLQMAERMGLVISDIQLDQTLENMAREQGMTLQGLRQEIES 121
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVL 184
G +++ + + V + + EI + + + E+ + +L
Sbjct: 122 DGTNYAAYREQIRREITIGQVQRIQVQRRVQISPQEINTLVEMINEQGLQDAEFHVGHIL 181
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+ ++ + R E +S + G ++ +++
Sbjct: 182 I----DFGGDETAARARADKVLELLEGGADFAQTALAASSGPKALEGGDWGFMNINEMPT 237
Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKH 300
F ++ + + P + G I I D R + + ++ + +P E
Sbjct: 238 LFAEVVKDAKKGDIIGPIKSGAGFHIITIYDTRGQEVQEVAEVNARHILLKPSPILSEDM 297
Query: 301 EAEYVKK 307
+ +
Sbjct: 298 AKTLLDE 304
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ + V E R +L + + ++ + + + D +L + S
Sbjct: 270 RGQEVQEVAEVNARHILLK--PSPILSEDMAKTLLDEFMADVKDGKADFGELAREHSDDP 327
Query: 228 D--VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G + + P F++ L + + P+ + G + + D+R
Sbjct: 328 GSAARGGDLGWADPNMYVPAFRDTLARLKVGEYSEPFRSSHGWHVVQLLDRRVTDATDQA 387
Query: 285 KAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
+ + Q K + + +++R+ A I
Sbjct: 388 NSDRAYQLLFRRKFGEQVNAWQEEMRAAAYIE 419
>gi|149927949|ref|ZP_01916199.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
gi|149823388|gb|EDM82621.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
Length = 456
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 99/259 (38%), Gaps = 12/259 (4%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETL 85
A I +N ++IT ++++++AL++ Q EL K + ++++
Sbjct: 47 SGAAAIDGIVAVVNTDIITRSELNRQVALIERQMSRRGAPLPDRIELRKQVLDRMVMDRA 106
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ Q+ E+ GI + + + A GLS EDF + L ++G+ F++ + +
Sbjct: 107 QLQKAEEVGIRIEEAQIEAAMARVADQNGLSLEDFLARLQEEGVSPARFREEVRSEITLG 166
Query: 146 DVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + + + + EI A + E +L P + +
Sbjct: 167 RLREREVEARIQVSDAEIQNYLAARTKGGAAPNQPEVNWVQLLVKAPSDASGATLNQARG 226
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
+A E L+ K + + ++ G+ + + F L K+Q N
Sbjct: 227 KVEAIEKALKDGKTVEAIVQTNPELAIDGTGQMGWSGFDAVPTLFSEFLSKAQLNAVQTI 286
Query: 262 VTQKGVEYIAICDKRDLGG 280
+ G + + ++R+ G
Sbjct: 287 RSPNGFHVLKVLERRESGA 305
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 5/158 (3%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+E + + + V + R +L I + ++R+ A E + L
Sbjct: 298 LERRESGAALDSTPVTQTRARHIL--IRPGPDITEAEARRRLNFALEQLQGGAATFDTLA 355
Query: 221 KFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
K S+ S G +L D P+F + + + + + ++ G I + ++R
Sbjct: 356 KRYSQDGSASKGGDLGWLYPGDTVPEFEREMNQLGIGGVSPVFQSRFGFHIIQVVERRQQ 415
Query: 279 GG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E + K E+ E++++LR I
Sbjct: 416 AASEERQRQAARQAIRANKSEESYQEWLRQLRDATFIE 453
>gi|74318356|ref|YP_316096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus
denitrificans ATCC 25259]
gi|121956487|sp|Q3SGF9|SURA_THIDA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|74057851|gb|AAZ98291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus
denitrificans ATCC 25259]
Length = 436
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 86/250 (34%), Gaps = 11/250 (4%)
Query: 42 IRTTINGEVITDGDISKR----IALLKLQKINGELE----KIAVQELIVETLKKQEIEKS 93
I +N EVIT +++KR + L Q K ++ ++ E +Q +
Sbjct: 38 IVAVVNDEVITRQELAKRYDEVVRNLSRQNTPLPPRNVLEKQLLERMVTELALQQHARNT 97
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ D V + A L + L+K+G + + + + + + D
Sbjct: 98 GVRADPTLVERALQRIAAQNKLDMAGLQAALEKEGQTLDGMRNTIRNELLIARARERDVD 157
Query: 154 LKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + EI Q + EY +L S+P+N Q ++ + ++L
Sbjct: 158 NRISVSDAEIDGYLQTQAQQGAETEYNFSHILVSVPENASPEQIRERRARAEDILAQLAA 217
Query: 213 PKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYI 270
D +L S D G + L F LK + + G +
Sbjct: 218 GADFAQLSASHSDAPDALKGGNFGWRASGKLPALFVEALKPMQPGEISPLLRSGNGFHIL 277
Query: 271 AICDKRDLGG 280
+ DKR L
Sbjct: 278 KLVDKRGLDA 287
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 61/153 (39%), Gaps = 6/153 (3%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++V + R +L N++ ++ + R+ +E R+ ++L + S+
Sbjct: 282 KRGLDATLSVTQTHARHILIKT--NEITSEADARNRLLQLKE-RIDNGVKFDELARLHSE 338
Query: 226 IHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
S G ++ D P F+ + + P + G I + ++RD
Sbjct: 339 DASASKGGDLGWINPGDTVPDFEKAMNALQPGEVSAPVQSPFGWHLIQVLERRDQDVTQE 398
Query: 284 LKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
+ ++ Q K E+ ++V+++R A +
Sbjct: 399 RQKLMARQAIRERKAEEAFQDWVRQIRDAAYVE 431
>gi|114048604|ref|YP_739154.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7]
gi|121956474|sp|Q0HS08|SURA_SHESR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|113890046|gb|ABI44097.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7]
Length = 434
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 110/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR ++ +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ +++ L + ++ + + EI +Q MK++ EY
Sbjct: 121 ESEGLSFGQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + +A RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPNSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ + + P + G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + L + S+
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKF----EDLARQYSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ + S P+F L S + + P+ T G + ++R
Sbjct: 332 DPGSATKGGELGWAEPSIYVPEFAQTLNSLSPDQISEPFRTTHGWHITQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R++A I +
Sbjct: 392 QFNTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427
>gi|160901465|ref|YP_001567047.1| SurA domain-containing protein [Delftia acidovorans SPH-1]
gi|160367049|gb|ABX38662.1| SurA domain [Delftia acidovorans SPH-1]
Length = 475
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 106/298 (35%), Gaps = 18/298 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGE------LEKIAVQELIVE 83
+ + I +N E +T+ ++ R+A + + + G+ L + ++ LIVE
Sbjct: 62 AKAGVRSADYIVAVVNSEPVTNNEVRARMARVAQNIAEQGGQMPPEALLAREVLERLIVE 121
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ QE + +G+ D V+ AR GL S L +G+ + F++ L Q
Sbjct: 122 KAQLQEAKDTGLRVDDYAVDQALTNVARQNGLDKAGLQSRLRAEGVNEKQFREELRRQIT 181
Query: 144 WPDV----VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V + +++ + + + + +L S+P+N + +
Sbjct: 182 LQRLRERDVDGRVRVTDADIDRYLAEQRSGGADKAPAAVNLGHILISVPENASPAEVAER 241
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKS-QNNT 257
+ R D + K S + D G A + D F + ++ Q
Sbjct: 242 EARAKQAAEAARTQGDFLAVVKEFSDVPDGQGGGAMGMRPLDRYPELFTKAVGQTAQGGI 301
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P+ + G + + +K G + ++ + E A+ + +
Sbjct: 302 VGPFRSGAGFHVLKVLEKSQAGMPSVVTQNHARHILLRIGDQMTEADAAKRLADYKRR 359
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 5/168 (2%)
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F G +++ Q V + R +L I D + KR+ D +
Sbjct: 305 FRSGAGFHVLKVLEKSQAGMPSVVTQNHARHILLRIGDQMTEADAA--KRLADYKRRVDS 362
Query: 212 LPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
L + S+ + G + P+F+ +L ++P V++ GV
Sbjct: 363 GQASFESLAREFSQDGSARNGGDLGWASPGQFVPEFEQVLNALQPGQVSDPLVSRFGVHL 422
Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + ++R + + K+E ++++LR A + Y
Sbjct: 423 IQLIERRQAALTPREQRDMVRNVVRERKLETDYQAWLQELRGRAYVEY 470
>gi|113969251|ref|YP_733044.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4]
gi|121956472|sp|Q0HLT0|SURA_SHESM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|113883935|gb|ABI37987.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4]
Length = 434
Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 110/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTMAAPQPIDRVAVQINDGIVLESEITNMIDTVKANARAANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR ++ +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMTVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ +++ L + ++ + + EI +Q MK++ EY
Sbjct: 121 ESEGLSFGQYREQLREEITLGEIQRIQVQRRIQVSPQEITGLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + +A RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPNSEQLEASSKRANAVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ + + P + G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKKGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 54/154 (35%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + + +
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKFEDLARQYSEDPGS 335
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + S P+F L SQ+ + P+ T G + ++R
Sbjct: 336 A--AKGGELGWAEPSIYVPEFAQTLNSLSQDQISEPFRTTHGWHITQLEERRKTDATDQF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R++A I +
Sbjct: 394 NTNRAHQLIFRRKFNEELQNWLDEMRADAYIEVF 427
>gi|298528166|ref|ZP_07015570.1| SurA domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298511818|gb|EFI35720.1| SurA domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 326
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 108/293 (36%), Gaps = 30/293 (10%)
Query: 41 RIRTTINGEVITDGDISKRIA-LLKLQK----------INGELEKIAVQELIVETLKKQE 89
RI +NGE IT D+ KR+ L L + E + ++++I + L +QE
Sbjct: 43 RIVAHVNGESITLFDLEKRVEMFLGLFEDISLDELPPVQQEETRRHVLEQMINDILMRQE 102
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
E+ I + + + +N ++ E+F L QG+ +K + + V+
Sbjct: 103 AERYQIEVRNREIQEHIERVKQNNNMNQEEFEQHLRAQGLSLEDYKDQIRDSMLRQRVMN 162
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
K I +EY + + K+ + V R+++AE
Sbjct: 163 IMVQRKTVVTSDRI------------KEYYEDNIQDFKKERKVHLKVLVVPRVEEAETLL 210
Query: 210 LRLPKD----CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
++ + E ++ G + + P+++ LK + P+ Q
Sbjct: 211 DKIKEGEYQFAEAAENYSQGPGASEGGDIGMVRWDRMRPEWREALKNMEAGEISEPFAMQ 270
Query: 265 KGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + D G ++ + + +EK EY++ LR A+I
Sbjct: 271 GQGVLLRVEEIHDEGAVPLEEVEEEIRDELFDKMLEKRFDEYIQGLRDRAVID 323
>gi|167590259|ref|ZP_02382647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ubonensis Bu]
Length = 452
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 103/299 (34%), Gaps = 22/299 (7%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLK 86
++ + +N +VIT ++ +R+ L+ + + ++++E ++
Sbjct: 35 GAQLTDEVVAVVNNDVITGRELDQRVGLISRRLKQQNAPVPPLDQMRAQVLNQMVLERIQ 94
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
Q+ + GI D V + A+ G++ + + + ++ QG+ + F + +
Sbjct: 95 VQKAKDDGIRIDDAAVQSTLQRLAQANGMTLDQYRARIEAQGVPWSVFTGDARTELMLSK 154
Query: 147 VVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + + K + E+ A+++ ++ + + P + Q ++
Sbjct: 155 LREREVDSKITVSDAEVASYIASQRGPSASQQQDLRFQHIFVKAPTSAPQADIEAAQKKA 214
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNP- 260
DA + + D +L K S+ D G + L +
Sbjct: 215 DALLKQAQSGADFERLAKNNSEADDAKKGGDLGFKSPGALPADVVAAASQLRPGQVNPTL 274
Query: 261 YVTQKGVEYIAICDKRDLGGEIALK--------AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G E + + D+R G A ++ + K E + + +R
Sbjct: 275 IRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGKSEGQARQQLIDIRKQ 333
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 70/182 (38%), Gaps = 4/182 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +++ + L + + + +R +L + + K ++
Sbjct: 263 SQLRPGQVNPTLIRVPDGFEIVRLVDRRQSQGASAAAPKIVQTHVRHILLRVGEGK--SE 320
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ- 254
G ++++ D + ++ G ++ + P+F+ + Q
Sbjct: 321 GQARQQLIDIRKQVEAGGDFAKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNNLQD 380
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAI 313
+ P T+ G I + ++R+ G + + ++ Q K E+ A+++++LR ++
Sbjct: 381 GQVSIPVRTEYGYHLIQVLERRESEGSVQQQMDIARQAIGQRKAEQAYADWLRELRDSSY 440
Query: 314 IH 315
+
Sbjct: 441 VQ 442
>gi|300724849|ref|YP_003714174.1| peptidyl-prolyl cis/trans isomerase [Xenorhabdus nematophila ATCC
19061]
gi|297631391|emb|CBJ92088.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Xenorhabdus
nematophila ATCC 19061]
Length = 434
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 83/247 (33%), Gaps = 8/247 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ LI++ + Q + IT T++ A LS L GI
Sbjct: 67 LRHQILERLIMDDIVLQMANRMQITIPDQTLDSAIAGIAAQNHLSLAQLKQNLVADGISF 126
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPD 189
+ ++ + + +V N+ + L E+ + + +N E I +L +P+
Sbjct: 127 DTYRNQIRKEMTISEVRNNEVRRRITILPQEVDSLTNQLEGQNNQDTELNISHILIPLPE 186
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q Q + S L+ D KL S G + +L F
Sbjct: 187 NPNQAQVEKAETTVRNILSELKNGVDFGKLAITYSGDTQALKGGNMGWNKLQELPSLFTE 246
Query: 249 LLKKS-QNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPTKIEKHEAE 303
L+ + + P + G + + D R + ++ + +P +
Sbjct: 247 QLQSAYKGQIIGPIRSGVGFHILKVNDTRGGNRSVAVTEVNARHILLKTSPVMNDDQARS 306
Query: 304 YVKKLRS 310
+ KLR
Sbjct: 307 ELMKLRE 313
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 6/150 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ +++ V E R +L + + N + + E L K K S+
Sbjct: 275 RGGNRSVAVTEVNARHILLKT--SPVMNDDQARSELMKLREEILSGKTTFEKAAKEYSED 332
Query: 227 HDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G+ + L S P F++ L K Q + P + G I + D R + A
Sbjct: 333 PGSAMRGGELGWNLPSAYDPAFRDALTKLQKGEISQPVHSAFGWHVIQLLDSRKVDKTDA 392
Query: 284 LKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++LR++A
Sbjct: 393 AQKDRAYRLLFNRKFNEEAQSWMQELRASA 422
>gi|167561603|ref|ZP_02354519.1| survival protein SurA, putative [Burkholderia oklahomensis EO147]
Length = 452
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 111/290 (38%), Gaps = 15/290 (5%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQK 67
S + L T + + + +++ + +N +VIT ++ +R+ L+ +LQ+
Sbjct: 12 SGLVASLITVAPAASAQALRALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQQ 71
Query: 68 INGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L + ++++E ++ Q + GI D+ TV + A+ G+ + +
Sbjct: 72 QKAPVPPIDQLRAQVLNQMVLERIQIQRAKDDGIVVDNATVQATLGRLAQANGMPLDQYK 131
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREY 178
+ ++ QG+ + F + + + + + + K + E+ A+++ + ++
Sbjct: 132 ARIEAQGVPWDVFVRDARTELMLSKLREKEVDGKITVSDAEVASYIASQRGPNAGSQQDL 191
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-SIGKAQY 236
+ + P + Q V ++ + + L D +L K S+ D G +
Sbjct: 192 RLEHIFVKAPTSAPQADIDVAQKKAEGLLQQALASGADFERLAKNNSEADDAKKGGDLGF 251
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYV-TQKGVEYIAICDKRDLGGEIAL 284
S L + + K V G E + + D+R A
Sbjct: 252 KSPSSLPSDVVDAVSKLRPGQVNPTLVRVPDGFEIVRLVDRRASQSVSAA 301
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 74/184 (40%), Gaps = 8/184 (4%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +V+ + L + + + + +R +L + + K ++Q
Sbjct: 266 SKLRPGQVNPTLVRVPDGFEIVRLVDRRASQSVSAASPKIVQTHVRHILLRVGEGKSESQ 325
Query: 196 GFVQKRIKDAEESR-LRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS 253
R + + R + D K + S+ S G ++ + P+F+ +
Sbjct: 326 A----RQQLIDIRRQVEAGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSL 381
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSN 311
Q +NP T+ G I + +RD G + + ++ Q K E+ ++++++LR +
Sbjct: 382 QDGQVSNPVRTEYGYHLIQVLGRRDAEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDS 441
Query: 312 AIIH 315
+ +
Sbjct: 442 SYVQ 445
>gi|303245475|ref|ZP_07331759.1| SurA domain protein [Desulfovibrio fructosovorans JJ]
gi|302493324|gb|EFL53186.1| SurA domain protein [Desulfovibrio fructosovorans JJ]
Length = 339
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 107/310 (34%), Gaps = 35/310 (11%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVE 83
+ + R+ +NG++IT D+ R+A L +Q+ G EL + ++ +I +
Sbjct: 33 ATQLVDRVVAVVNGKLITLFDLDSRVAEL-VQRTQGISFAPGDPRAEELRRQVLESMIND 91
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L +QE + I ++ + + L+ F + L K+G+ F++ + ++
Sbjct: 92 ILIEQEAARLKINVSETELDSQIDELKKKNNLTQAQFQAELAKEGLTLKEFRKRMREDNM 151
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ K + EI +K K L T P + K
Sbjct: 152 KKRLLGFMVHRKVLVTDDEIRDYYEKHKAT-----LSTTKSILGPKVSGNISFIMVPTKK 206
Query: 204 DAEESRLRLPKDC----NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
AEE R ++ + KF+ G + DL P ++ L +
Sbjct: 207 QAEELRQKIGAGTITFADAARKFSIGPGRDQGGDLGDVQVKDLAPPLRDALTAVPAGQVS 266
Query: 259 NPYVTQKGVEYIAIC-DKRDLGGEIAL------------KAYLSAQNTPTKIEKHEAEYV 305
P + + + K + + + K +K +Y+
Sbjct: 267 QPVMLDGKAVLLKLRTGKNAAPAKTPQPAPSAGPSFESVRNQIQEMLYKQKFDKLFQDYM 326
Query: 306 KKLRSNAIIH 315
LRS A+I
Sbjct: 327 DNLRSKAVIE 336
>gi|301059205|ref|ZP_07200143.1| SurA N-terminal domain protein [delta proteobacterium NaphS2]
gi|300446695|gb|EFK10522.1| SurA N-terminal domain protein [delta proteobacterium NaphS2]
Length = 324
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 122/315 (38%), Gaps = 21/315 (6%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKR------IALLKLQK 67
+T FVL+ + + A R+ +N +V+T +++ R +A L++
Sbjct: 4 STIFVLMFLFVGANAFLQGKANGEIYNRVVAIVNADVVTLYELNTRLTQMTGMAPDALKR 63
Query: 68 ING----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ E+ + ++ LI E + ++I++ I + V+ R ++ ED +
Sbjct: 64 KSESQYLEMRRKVLEMLIEEKIAIEKIKEMKINVPQSEVDAAIETLKRENDMTQEDLVAG 123
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIR 181
L QG+ + +++ L + ++ + K + E+ A K+ + +
Sbjct: 124 LKAQGLSLDEYRKRLKTELERRRLINYEVRSKIIITDEEVQAYYDTHKDNYSTKGKVHLA 183
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLES 240
+ D + + +R D +++ ++ +F++ G S
Sbjct: 184 MIFLKQEDPGNREEARALRRKADQIIGKIKAGENFGTLAAQFSNGPGAKDGGDLGVFNIS 243
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTK 296
+L+ + + S P V G++ I + +K D GGE + + + + K
Sbjct: 244 ELNSEMAASIKDLSSGEIGTPIVRPNGIQIIKVVEK-DEGGEKSFEKVKNAIRSTLYREK 302
Query: 297 IEKHEAEYVKKLRSN 311
+ + ++K LR
Sbjct: 303 MNQAYDAWIKDLREK 317
>gi|171060582|ref|YP_001792931.1| SurA domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778027|gb|ACB36166.1| SurA domain [Leptothrix cholodnii SP-6]
Length = 464
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 113/311 (36%), Gaps = 14/311 (4%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71
L+ + +L + S + I +N E++T+ ++ +R+ L+ +
Sbjct: 37 LVVSLLMLGLAPASGSAQEGSRQNADYIVAVVNRELVTNSEVQQRVERLEQEAARANAQV 96
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L++ + +LI E + +SG+ D ++ A L+ + L
Sbjct: 97 PSRDALQRDVLDQLIDERAQLGVARESGLRIDDAELDRTVASVAAQNQLTVAEMRERLRA 156
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVL 184
G+ F+ L + + + + + + ++ +I +Q+ K+ E+ I +L
Sbjct: 157 DGLDYPRFRDNLRDRLLLERLREREVQARLRIVDADIENWLVQQREKSGASNEFNIAQIL 216
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
++P+N ++ + RLR +D KL S + G+ L
Sbjct: 217 IAVPENANVADTAARRAVAVNVLQRLRAGEDFGKLVLELSDASKANGGELGLRRGDALPD 276
Query: 245 QFQNLLKKSQNNTTNPYVTQK--GVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKH 300
F ++ P V + G + + +++D I ++ + P ++
Sbjct: 277 LFVEAVQPLLAGEVAPQVVRSGAGFHVLKLIERKDATLSIPQTRARHILLRPGPGLSQET 336
Query: 301 EAEYVKKLRSN 311
+ + R
Sbjct: 337 VIARLAEFRQR 347
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 59/152 (38%), Gaps = 5/152 (3%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
++K +++ + R +L +Q V R+ + + L +L + S+
Sbjct: 308 ERKDATLSIPQTRARHILLR--PGPGLSQETVIARLAEFRQRILGGRARFEELARQFSED 365
Query: 227 HDVSIG-KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G + P+F+ + + P V++ GV I + ++R + ++
Sbjct: 366 GSAAGGGDLGWAAPGQFVPEFEQAMQDLQPGGLSAPVVSRFGVHLIQLIERRQVSLDVRQ 425
Query: 285 KAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K E+ E+ + +R+ A +
Sbjct: 426 QREVARNALREQKYEETYLEWSRDVRARAYVE 457
>gi|152999582|ref|YP_001365263.1| SurA domain-containing protein [Shewanella baltica OS185]
gi|160874201|ref|YP_001553517.1| SurA domain-containing protein [Shewanella baltica OS195]
gi|217974467|ref|YP_002359218.1| SurA domain-containing protein [Shewanella baltica OS223]
gi|151364200|gb|ABS07200.1| SurA domain protein [Shewanella baltica OS185]
gi|160859723|gb|ABX48257.1| SurA domain [Shewanella baltica OS195]
gi|217499602|gb|ACK47795.1| SurA domain protein [Shewanella baltica OS223]
gi|315266433|gb|ADT93286.1| SurA domain [Shewanella baltica OS678]
Length = 434
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 112/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKTANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR +S +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMSVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ + +++ L + ++ + + EI + +Q MK++ EY
Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITSLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + + RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPTSEQLESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ ++ + P + G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKTGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 57/156 (36%), Gaps = 10/156 (6%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + L + S+
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKF----EDLARQYSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ + S P+F L + + + P+ T G + ++R
Sbjct: 332 DPGSATKGGELGWAEPSIYVPEFAQTLNSLKTDQISEPFRTTHGWHITQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K + ++ ++RS+A I +
Sbjct: 392 QFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEIF 427
>gi|117925616|ref|YP_866233.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp.
MC-1]
gi|117609372|gb|ABK44827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetococcus sp.
MC-1]
Length = 442
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 108/271 (39%), Gaps = 14/271 (5%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE-----L 72
V +I ++ I + GE+I + +I+ R ++K + + L
Sbjct: 13 MVSMILLSTLTKPVEAGVPLDGIAAVVEGEIILESEIADQLRAQVMKFSRAGEQVDVALL 72
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ + ++ L+ Q+ ++ GI V+ + A++ +S E F L ++G+G +
Sbjct: 73 RRRVLDGAVMRVLRAQKAKQLGINLKDADVDGAVQRMAQHNNVSVEQFKMMLAREGVGFD 132
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITV-REYLIRTVLFSI 187
+ + Q +++ + + E+ A +Q + I E I+ +L S+
Sbjct: 133 SYLSSIRDQLYVQQIIRQVILPSVRVSDEEVQDLYKATRQDPEKIGGEPELRIKQILLSV 192
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF 246
P+N L ++ + S+LR + + + ++ G + +L Q
Sbjct: 193 PENALIHRVREISDKAKSLVSQLRGGASFARLASEHSDDPSGLNGGDMGWFKRGELQAQI 252
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
++L+ K + P T +G + ++R
Sbjct: 253 EDLVFKLEDGAISEPVRTTQGFHIFMVAERR 283
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 54/164 (32%), Gaps = 6/164 (3%)
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E + + + + V+ Y R +L + N + + +
Sbjct: 279 VAERRVQQHFGQSEGDHVKVY-ARHILLKVAPNSDAQTSAQVRNQLEKLRREIEAGASFA 337
Query: 218 KLEKFASKIHDVSIGKAQYLLESD--LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
++ K S+ + + P F+++ + P + G I +
Sbjct: 338 EVAKRYSQDDGSAQKGGDLGGFGRGVMVPSFEDVAFFLKPGVVSEPVRSPFGWHLIEVTK 397
Query: 275 KRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + K L+ + KI+ ++++ LR ++ + Y
Sbjct: 398 REEQKADTMDEAKKELTVRLREAKIKARYTQWLRDLRLSSFVDY 441
>gi|58698186|ref|ZP_00373108.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630920|ref|YP_002727711.1| hypothetical protein WRi_012370 [Wolbachia sp. wRi]
gi|58535336|gb|EAL59413.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592901|gb|ACN95920.1| hypothetical protein WRi_012370 [Wolbachia sp. wRi]
Length = 381
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALL-----KLQKINGELEKIAVQELIVETLKKQEIE 91
A I +NGE I++ DI KRI + E + ++ELI E + E +
Sbjct: 18 ATEIEIVADVNGEPISNLDIEKRINFINSLFGTQSVNQKEAKPQVLRELIDEIVIINEAQ 77
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ I + ++ + + L A + +++K I ++ + Q +W +++
Sbjct: 78 RLNIKLSNEELDNAIMLFLTQSFKLKANEVDQYIEKHNIDLGILRKQIKCQLLWSKIIEV 137
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK------LQNQGFVQKRIKD 204
+ + EI K++ + YLI F IPD K + + R +
Sbjct: 138 RIVPFINISDKEINDVKRQTEKPN---YLITFQEFIIPDQKDKDVYGIAEDLVKKLRNSN 194
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIG 232
ES +++ K L + K+ V G
Sbjct: 195 NPESPIKMRKATVNLSQLKGKLKSVLEG 222
>gi|304410420|ref|ZP_07392038.1| SurA domain protein [Shewanella baltica OS183]
gi|307304512|ref|ZP_07584262.1| SurA domain protein [Shewanella baltica BA175]
gi|304350904|gb|EFM15304.1| SurA domain protein [Shewanella baltica OS183]
gi|306911914|gb|EFN42338.1| SurA domain protein [Shewanella baltica BA175]
Length = 434
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 112/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKTANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR +S +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMSVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ + +++ L + ++ + + EI + +Q MK++ EY
Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITSLVKLIQEQGMKDV---EYK 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + + RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPTSEQLESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ ++ + P + G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKTGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 57/156 (36%), Gaps = 10/156 (6%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + L + S+
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKF----EDLARQYSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ + S P+F L + + + P+ T G + ++R
Sbjct: 332 DPGSATKGGELGWAEPSIYVPEFAQTLNSLKTDQISEPFRTTHGWHITQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K + ++ ++RS+A I +
Sbjct: 392 QFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEIF 427
>gi|114564239|ref|YP_751753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
frigidimarina NCIMB 400]
gi|121956468|sp|Q07YK0|SURA_SHEFN RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|114335532|gb|ABI72914.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
frigidimarina NCIMB 400]
Length = 434
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 106/312 (33%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K ++ + S + R+ IN +I + +I+ ++ +K
Sbjct: 1 MKHSKKIIFALLALAMSNTSMAAPMPLDRVSVQINDGIILESEITNMVSTVKANAKAANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q E+ G+ ++ A+ ++ +
Sbjct: 61 TLPSDDALRTQVIERLILTHLQMQMAERIGLQIGDLQLDQTIENIAKEQKVTVAQMQQTI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G + +++ L + ++ + + EI +Q +K++ E+
Sbjct: 121 ESEGTSFSQYREQLRQEVTLGEIQRIQVQRRIQVSPQEISGLVKLIQEQGLKDV---EFQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLL 238
I +L +P N Q R + RL D + +S + G ++
Sbjct: 178 IGHILIEVPSNPTSEQLEGASRRAEIVLKRLNNGDDFRSTAIASSSGPKALEGGIWDFMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTP 294
+++ F ++ + + P + G I + D R E ++ + +P
Sbjct: 238 INEMPTLFAEVISNAKKGDIIGPIKSGSGFHIIKVVDTRGLQTQEVEEVKSRHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E +
Sbjct: 298 ILSEDRAKAMLA 309
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ V E R +L + + ++ + + + D KL S+
Sbjct: 276 RGLQTQEVEEVKSRHILLK--PSPILSEDRAKAMLANFLAQVRAGDADFAKLATQYSEDP 333
Query: 228 D--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + S P+F L Q + P+ T G + + +R
Sbjct: 334 GSAAKGGELGWADPSMYVPEFTQTLASLQEGQYSEPFRTTHGWHVVQLESRRKTDATEQF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315
+ + Q K + ++ ++RS A I
Sbjct: 394 NSNRAHQLIFRRKFNEELQNWLDEMRSEAYIE 425
>gi|308185631|ref|YP_003929762.1| survival protein SurA precursor [Pantoea vagans C9-1]
gi|308056141|gb|ADO08313.1| survival protein SurA precursor [Pantoea vagans C9-1]
Length = 431
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 96/269 (35%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------E 71
+++ I ++ + + ++ +N V+ + D+ + +K Q
Sbjct: 6 MLILGVAISANTAFAAPQVVDKVAAVVNNGVVLESDVDGMMGTVKSQAQQAGQQLPDDKT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ I++ + Q EK+GI ++ A +S + S L G+
Sbjct: 66 LRHQILERQIMDNIILQMGEKAGIQISDEQLDQAIQNIAAQNRMSLDQLRSRLAYDGMNY 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
+ ++ + + +V N+ + L E+ AN+ +N E + +L +P+
Sbjct: 126 SVYRSQIRKEMTIAEVRNNEVRRRVTILPQEVDTLANQIGSQNSQGTELNVSHILLPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q Q Q+ + L+ D K+ S G + +L F
Sbjct: 186 NPTQQQVDEQETLAKQLVGELKNGADFGKMAVTYSADSQALKGGNMGWGKIEELPTLFAQ 245
Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 246 ALATAKKGDIVGPVRSGVGFHILKVNDLR 274
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + KN++V E R +L P L + + + A + R ++++
Sbjct: 274 RGESKNVSVTEVHSRHILLK-PSPILTDDQARAQLEQIAADIRSGKTTFAAAAKQYSDDP 332
Query: 227 HDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G + P F++ LL+ + T+ P + G I + D R + A
Sbjct: 333 GSANQGGDLGWTSPEVFDPAFRDALLRLKKGQTSQPVHSSFGWHLIQLLDTRQVDKTDAA 392
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R++A
Sbjct: 393 QKERAYRMLFNRKFAEEAQTWMQEQRASA 421
>gi|270157914|ref|ZP_06186571.1| chaperone SurA [Legionella longbeachae D-4968]
gi|289163812|ref|YP_003453950.1| peptidyl-prolyl cis-trans isomerase SurA [Legionella longbeachae
NSW150]
gi|269989939|gb|EEZ96193.1| chaperone SurA [Legionella longbeachae D-4968]
gi|288856985|emb|CBJ10799.1| putative peptidyl-prolyl cis-trans isomerase SurA [Legionella
longbeachae NSW150]
Length = 431
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 104/274 (37%), Gaps = 13/274 (4%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------- 66
+ ++ IF V + ++ M ++ +N VIT+ +++K++ L K Q
Sbjct: 1 MYKKIALICIFFSVVMGIAQAKQMLDKVVAVVNDGVITESELNKQVELSKKQILAQKMQL 60
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L K +Q LI L+ Q +K+G+T D +N + A ++ + +
Sbjct: 61 PEESVLRKQVLQHLIDVDLQLQMAKKNGLTVDDTELNQAIEKIASANHVTLTQLREEIVR 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI---TVREYLIRTV 183
QG+ + +++ + + + + + ++ + I + Y I+ +
Sbjct: 121 QGMSWDEYRENIRKEMLLSHLQQKAVGRDAMVTSEQVEQYLKTEGGIVDRSALTYRIQNI 180
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDL 242
+ + + Q K + S+++ D ++L + +S + G +++
Sbjct: 181 VIPLGEEPTSEQVKKAKNKAELLLSKIKKGDDFSRLAIENSSGEFALEGGDLGERHLAEI 240
Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
F + ++K P G + I +
Sbjct: 241 PELFAKEVVKMKVGQVAGPLRAGNGFQLIKLVSI 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 7/169 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ + + ++ + + +R +L N L Q R
Sbjct: 256 VAGPLRAGNGFQLIKLVSIGGENQHHIITKTHVRHILLKPDPNMLPEDAKKQVR---NIY 312
Query: 208 SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
+++ KD + K S V G ++ L P+F+ + K N + P +Q
Sbjct: 313 QQIKAGKDFALMAKQYSLDSASAVKGGDLGWVSPGVLVPEFEKAMDKLAINEISPPVKSQ 372
Query: 265 KGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
G I + ++ A K + K + + + +R++A
Sbjct: 373 FGWHLIQVLGRKQEDDSEAFKVQKVRQFLQQRKFAEAVQNWQQHIRTDA 421
>gi|188532873|ref|YP_001906670.1| peptidyl-prolyl cis-trans isomerase SurA [Erwinia tasmaniensis
Et1/99]
gi|188027915|emb|CAO95772.1| Peptidyl-prolyl cis-trans isomerase, survival protein [Erwinia
tasmaniensis Et1/99]
Length = 431
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 79/210 (37%), Gaps = 4/210 (1%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ L+++ + Q+ +++G+ ++ A+ LS + S L G+
Sbjct: 65 TLRHQILERLVMDNILLQKAKQAGLQVSDAQLDQAIANIAQQNKLSIDQLRSRLAYDGMN 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIP 188
+++ + + +V ++ + L E+ A + +N E I +L +
Sbjct: 125 YATYREQIRQEMATSEVRNSEVRRRVSILPQEVDSLAEQMASQNSAGTELNISHILLPLS 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF- 246
+N Q Q Q+++ S R D KL S G + +L F
Sbjct: 185 ENPTQQQVDDQEKLARQLTSEARSGADFAKLAIANSADAQALKGGNMGWGRLQELPSLFA 244
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
Q L+ + + P + G + + D R
Sbjct: 245 QALVTAKKGDIIGPIRSGVGFHILKVNDMR 274
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 84/296 (28%), Gaps = 43/296 (14%)
Query: 55 DISKRIALLKLQKINGELE----KIAVQELIVETL-KKQEIEKSGI---------TFDSN 100
I + +A +++ V L + + + I
Sbjct: 131 QIRQEMATSEVRNSEVRRRVSILPQEVDSLAEQMASQNSAGTELNISHILLPLSENPTQQ 190
Query: 101 TVNYF--FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----------- 147
V+ + + S DF+ K W +
Sbjct: 191 QVDDQEKLARQLTSEARSGADFAKLAIANSADAQALKG---GNMGWGRLQELPSLFAQAL 247
Query: 148 VKNDFMLKYGNLEM-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
V G + ++ + ++I+V E R +L + + ++
Sbjct: 248 VTAKKGDIIGPIRSGVGFHILKVNDMRGDNQSISVTEVHARHILLK--PSPIMTDDQARQ 305
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+++ + K S+ + G + P F++ LL+ +
Sbjct: 306 KLQQVAAEIKSGKLTFSDAAKQLSQDPGSANQGGDLGWSSAEVFDPAFRDALLRLKKGQI 365
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
++P + G I + D R + A K + + K + ++++ R+ A
Sbjct: 366 SDPVHSSFGWHLIELMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAA 421
>gi|317046868|ref|YP_004114516.1| SurA domain-containing protein [Pantoea sp. At-9b]
gi|316948485|gb|ADU67960.1| SurA domain protein [Pantoea sp. At-9b]
Length = 431
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 10/252 (3%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ I++++ Q EK+G+ ++ A ++ + S + GI
Sbjct: 65 TLRHQILERQIMDSIVLQMGEKAGLQISDQQLDEAIQNIAGQNHMTLDQLRSRIAYDGIN 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIP 188
N ++ + + + +V N+ + L E+ A + +N E + +L +P
Sbjct: 125 YNEYRAQIRKEMMISEVRNNEVRRRVTILPQEVDTLAKQIGSQNTQGTELNVSQILLPLP 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQ 247
+N Q Q Q+ + L+ D KL S G + +L F
Sbjct: 185 ENPTQQQVDDQEALARQLVGELKKGADFGKLAVTYSADPQALKGGNMGWSKIEELPSLFS 244
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEA 302
L +Q + P + G + + D R ++ ++ + +P +
Sbjct: 245 QALATAQKGDVVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPILTDDQAR 304
Query: 303 EYVKKLRSNAII 314
++++ A I
Sbjct: 305 AKLEEI--AADI 314
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 6/150 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + KNI+V E R +L + + + ++++ K S
Sbjct: 274 RGESKNISVTEVHARHILLK--PSPILTDDQARAKLEEIAADIRSGKITFAAAAKQYSDD 331
Query: 227 HDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G + P F++ L++ + T+ P + G I + D R + A
Sbjct: 332 PGSANQGGDLGWTSPEVFDPAFRDALMRLQKGQTSQPVHSSFGWHLIQLLDTRQVDKTDA 391
Query: 284 LKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R++A
Sbjct: 392 AQKERAYRLLFNRKFAEEAQTWMQEQRASA 421
>gi|120599971|ref|YP_964545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
W3-18-1]
gi|146292095|ref|YP_001182519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
putrefaciens CN-32]
gi|120560064|gb|ABM25991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
W3-18-1]
gi|145563785|gb|ABP74720.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
putrefaciens CN-32]
gi|319425391|gb|ADV53465.1| outer membrane protein maturation factor, peptidyl-prolyl cis-trans
isomerase, SurA [Shewanella putrefaciens 200]
Length = 434
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 101/279 (36%), Gaps = 18/279 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEIVSMIGTVKANAKAANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR +S +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKMSVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ + +++ L + ++ + + EI + +Q MK++ EY
Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEISSLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + + RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPTSEQLEASSKRANIVLERLKNGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+++ F +L ++ + P + G I I D R
Sbjct: 238 INEMPTLFAEVLSGAKTGDIIGPIKSGAGFHIIKIMDSR 276
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 52/154 (33%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L + + + +++ +K + + +
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSDDRAKAMLEQFLKQIRAGEAKFEDLARQYSEDPGS 335
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + + P+F L + + P+ T G + ++R
Sbjct: 336 A--AKGGELGWADPNIYVPEFAQTLSSLAIDQISEPFRTTHGWHITQLEERRKTDATDQF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K + ++ ++RS+A I +
Sbjct: 394 NSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEVF 427
>gi|332140206|ref|YP_004425944.1| survival protein surA [Alteromonas macleodii str. 'Deep ecotype']
gi|327550228|gb|AEA96946.1| survival protein surA [Alteromonas macleodii str. 'Deep ecotype']
Length = 427
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 104/273 (38%), Gaps = 15/273 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDIS------KRIALLKLQKIN 69
F++ + ++S+ S A R+ ++ V+ + +I KR A Q++
Sbjct: 2 KFIIRALMLGALLSFNSIAQEVVLDRVAVIVDQGVVLESEIDALVQEVKRNAAANDQQLP 61
Query: 70 GE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ L A++ LI ++L+ Q E+ GI + A N + E + L +
Sbjct: 62 SDRALRTQAIERLITKSLQLQMAERMGIRISDPQLEQTIGNIASNQNATVEQLRAQLAAE 121
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLF 185
GI + +++ + + I +V + + + E+E + + + EY + +L
Sbjct: 122 GIAYDDYREDIREEIIMGEVRRANVRRRVYITPQEIETLVDLMEQQGAQQAEYRLGHILI 181
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHP 244
P + D + L D K+ +S ++ G +L + +
Sbjct: 182 GFPPEPTDEDIQAARERADKVIALLESGSDFAKIAIASSSGNEALEGGDMGWLNINAMPT 241
Query: 245 QFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F ++ K ++ P + G + + D R
Sbjct: 242 LFAEAIQNKDKDALVGPIRSGAGFHILKVLDTR 274
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVL--FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ +TV E R +L SI ++ + + + + ++ + + +
Sbjct: 274 RGIEKVTVEEVNSRHILVKPSIILSEDKAKAMLTRFKEELKNGEAEFADLAKEHSEDPGS 333
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIA 283
G+ + + P+F+ L + ++P T G I + D+R D +
Sbjct: 334 AL--RGGELGWSDPGNYVPEFKEALSQLEPGEYSDPVRTVHGWHLIQLIDRRMDDATDKR 391
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + +++++R A +
Sbjct: 392 KEDKAYQLIFNRKFSEETENWLREMRDAAYVE 423
>gi|186475166|ref|YP_001856636.1| SurA domain-containing protein [Burkholderia phymatum STM815]
gi|184191625|gb|ACC69590.1| SurA domain protein [Burkholderia phymatum STM815]
Length = 463
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 100/283 (35%), Gaps = 14/283 (4%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------- 70
+ + + S I +N VIT ++ R+ L+ +
Sbjct: 21 SILLAGPAHAQALNGSGSAQTVDTIAAVVNNGVITQRELDMRVGLITKRLNQQHAPIPPA 80
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+L + + ++++E ++ Q+ + GIT D TV + A+ L + + + ++ QG+
Sbjct: 81 DQLRQQVLNQMVLERIQLQKAREDGITVDDATVQRTLERLAQANNLQLDMYRARIEAQGV 140
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFS 186
F + I + + + K + E+ A+++ + + +
Sbjct: 141 PWTTFMGDAKTELILSRLREKEVDSKVTVSDAEVANYIASQRGPTAGLASDLHLEHIFLK 200
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQ 245
P N Q + +A + KL K S+ D S G + S L +
Sbjct: 201 APLNASQTDIEAAQAKANALLQEALKGDNFGKLAKSNSQAPDASKGGDLGFQAPSRLPAE 260
Query: 246 FQNLLKKSQNNTTNP--YVTQKGVEYIAICDKRDLGGEIALKA 286
F + NP T G E + + ++R G + +
Sbjct: 261 FVTAAATLRPGQVNPSVIRTNDGFEIVRLVERRSGQGSASADS 303
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+E + + + +R +L + ++ ++++ + + D
Sbjct: 287 VRLVERRSGQGSASADSTKLVQTHVRHILLRV--GDGMSEPQARQKLLEIRQEIEAGQGD 344
Query: 216 CNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
+K + S+ S G ++ + P+F+ + Q N + P ++ G I +
Sbjct: 345 FDKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSLQDNQISQPVRSEYGYHLIQVL 404
Query: 274 DKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIHY 316
+R+ G ++ + L+ Q K E+ A+++++LR A + Y
Sbjct: 405 GRREAEGSVSQQMDLARQAIGQRKAEQAYADWLRELRDTAYVDY 448
>gi|332531190|ref|ZP_08407103.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis
ATCC 19624]
gi|332039297|gb|EGI75710.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis
ATCC 19624]
Length = 447
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/327 (13%), Positives = 107/327 (32%), Gaps = 25/327 (7%)
Query: 10 SDFIKLLTTYFVLIIFCIV----PIVSYKSWAMSSRIRTTINGEVITDG----DISKRIA 61
S ++L T +L + S + I +N E IT+ ++++ +
Sbjct: 5 SVLGRVLCTAMLLAVLGAAQAQGTPAPPPSVRSADYIVAVVNSEPITNAQVNAEVARALR 64
Query: 62 LLKLQKINGE----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
L Q+ L + + +LI E + Q + G+ D +V+ AR L+
Sbjct: 65 QLAAQRRPAPEGQALRRQVLDQLINERAQLQLAREMGLKIDEPSVDQAEQNVARQNQLTV 124
Query: 118 EDFSSFLDKQ-GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA----NKQKMKN 172
+ +Q G+ + L Q + + + + + + ++ +Q+ N
Sbjct: 125 TQLREQVQQQDGMTTQALRARLKEQLLLTRLREREVDARVKVSDADVEQYLSEQQQRNSN 184
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD--AEESRLRLPKDCNKLEKFASKIHDVS 230
+ I +L ++P++ +R + A +R + + + +
Sbjct: 185 PASQLIHIAHILVAVPEDASATFQLESQRKAEQIARRAREKGADFAALARELSDAADRAN 244
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD-----LGGEIAL 284
G+ F N ++ + P + G + + ++R +
Sbjct: 245 GGQLGLRAGDRYPALFTNAVRTLAVGEISEPVRSGAGFHVLKLIERRQPAPAPQTVTQSR 304
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
++ + E + + R
Sbjct: 305 ARHILLIPSAQLSEAQARDKLNDFRRR 331
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 57/156 (36%), Gaps = 5/156 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
I + TV + R +L + ++ + ++ D D L +
Sbjct: 288 IERRQPAPAPQTVTQSRARHILLI--PSAQLSEAQARDKLNDFRRRIQSGDTDFATLARQ 345
Query: 223 ASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG- 279
S+ + G + P+F+N++ + + + P +++ GV I + ++R
Sbjct: 346 NSQDGSAAQGGDLGWASPGMFVPEFENVMNQLAPGQISEPLISRFGVHLIQLLERRQATL 405
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E + + K+ + +++ R+ A +
Sbjct: 406 NEREQRELVRNMLRERKMAEAYDNWIRDTRARAYVE 441
>gi|167568839|ref|ZP_02361713.1| survival protein SurA, putative [Burkholderia oklahomensis C6786]
Length = 449
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 112/296 (37%), Gaps = 15/296 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 3 KTLRFAAVASGLVASLITVAPAASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 62
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 63 ARRLQQQKAPVPPIDQLRAQVLNQMVLERIQIQRAKDDGIVVDNATVQATLGRLAQANGM 122
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 123 PLDQYKARIEAQGVPWDVFVRDARTELMLSKLREKEVDGKITVSDAEVASYIASQRGPNA 182
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P + Q V ++ + + L D +L K S+ D
Sbjct: 183 GSQQDLRLEHIFVKAPTSAPQADIDVAQKKAEGLLQQALASGADFERLAKNNSEADDAKK 242
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV-TQKGVEYIAICDKRDLGGEIAL 284
G + S L + + K V G E + + D+R A
Sbjct: 243 GGDLGFKSPSSLPSDVVDAVSKLRPGQVNPTLVRVPDGFEIVRLVDRRASQSVSAA 298
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 74/184 (40%), Gaps = 8/184 (4%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L + P +V+ + L + + + + +R +L + + K ++Q
Sbjct: 263 SKLRPGQVNPTLVRVPDGFEIVRLVDRRASQSVSAASPKIVQTHVRHILLRVGEGKSESQ 322
Query: 196 GFVQKRIKDAEESR-LRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKS 253
R + + R + D K + S+ S G ++ + P+F+ +
Sbjct: 323 A----RQQLIDIRRQVEAGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNSL 378
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSN 311
Q +NP T+ G I + +RD G + + ++ Q K E+ ++++++LR +
Sbjct: 379 QDGQVSNPVRTEYGYHLIQVLGRRDAEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDS 438
Query: 312 AIIH 315
+ +
Sbjct: 439 SYVQ 442
>gi|114768927|ref|ZP_01446553.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [alpha
proteobacterium HTCC2255]
gi|114549844|gb|EAU52725.1| Probable PpiC-type peptidyl-prolyl cis-trans isomerase [alpha
proteobacterium HTCC2255]
Length = 297
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 115/301 (38%), Gaps = 11/301 (3%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
FIK++T +L P + + ++ +N ++IT+ +IS+RI +L++
Sbjct: 3 FIKIMTAILLL-----SPFTAMAQSTNTFKVAVEVNDQIITNYEISQRIKMLEIFGAKSV 57
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K + LI E L + G +++ ++ A+ L+ +D ++LD + +
Sbjct: 58 SKKEVINSLINERLYTYSANELGALPNNSEIDKGLDDFAKRGNLNKKDLLAYLDTRNVSQ 117
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
Y+ V++ F+ + ++ + ++ + I + N
Sbjct: 118 ETLLAYITSGLTQRKVIQKKFVNNIIISQSDVASAIDLEGLLSKDNFNIVEYIEIKFLNL 177
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
L + K+ + ++ +C L+ K ++S+ +DL N L
Sbjct: 178 LSD-----KKSLKYLNTINKMVDNCLDLQSEVKKYENISL-IVHKKRSNDLQKNILNELN 231
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
N T K Y+ + R+ + L + +I K Y++KL+
Sbjct: 232 NLDINETKVVKNLKNEHYLLMLCSRNSEMDKNTIETLRNKIFNNRINKIGKAYIQKLKGE 291
Query: 312 A 312
A
Sbjct: 292 A 292
>gi|254447632|ref|ZP_05061098.1| chaperone SurA [gamma proteobacterium HTCC5015]
gi|198262975|gb|EDY87254.1| chaperone SurA [gamma proteobacterium HTCC5015]
Length = 442
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 114/312 (36%), Gaps = 18/312 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-------ISKRIALLKLQKI 68
+ +++ F ++ + +RI ++ ++I + + + RI
Sbjct: 4 MIARLLILFFLFATPLAQAEPQVLARIAAVVDTDIILEQEMLDELSRVKARIQASGQTPP 63
Query: 69 NGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
E L++ ++ LIV+ ++ Q ++ GI D +N + A G+S F + ++ +
Sbjct: 64 PDEILKRQVLEHLIVKEVQMQAADRVGINVDDTFLNEQLQRIASENGMSLAQFKAKIESE 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFS 186
G+ +++ L + + + + E E+ Q EY + +L
Sbjct: 124 GMDYVEYREMLREEMKIQQLRQRTVYDRVVVSEQEVDDYLAQNPVGSESVEYQLGHILVG 183
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQ 245
P+ Q ++ D +++ ++L + + G +L + +
Sbjct: 184 TPEAATPEQVDTARKEADNLYEQIKQGARFSQLALSHSDGQRALDGGDLGWLPQGRVPSL 243
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT-----PTKIEK 299
F ++ Q + P + G + + R G E + + A++ ++
Sbjct: 244 FLEAIESLQKGQVSRPIRSPSGFHLVQLKGVR--GDERRVIQQVRARHILLTPNAVLSDE 301
Query: 300 HEAEYVKKLRSN 311
+ + +LR
Sbjct: 302 QARQKIAELRRR 313
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 58/155 (37%), Gaps = 5/155 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + +++ R +L + N + + +++I + + + +L K S
Sbjct: 272 KGVRGDERRVIQQVRARHILLT--PNAVLSDEQARQKIAELRRRIVEADESFAELAKAHS 329
Query: 225 KIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-E 281
+ G + + P F+ +++ N + P+ + G + + ++R +
Sbjct: 330 IDGSAAQGGDLGWAAPREYVPAFRQVVETLPLNTLSEPFRSDFGWHIVEVLERRQYDETD 389
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + K + E ++++LR + Y
Sbjct: 390 EYRRGMARQELRKMKASEEEELWLRRLRDQTYVEY 424
>gi|296116659|ref|ZP_06835269.1| peptidyl-prolyl cis-trans isomerase [Gluconacetobacter hansenii
ATCC 23769]
gi|295976871|gb|EFG83639.1| peptidyl-prolyl cis-trans isomerase [Gluconacetobacter hansenii
ATCC 23769]
Length = 461
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 15/279 (5%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQE 79
+ I +NG V+T D+ R L L L V++
Sbjct: 51 ATAEAADTGPQTEDSIVAIVNGSVLTKRDVDTRGRLFALSSGLDVSKDVMVRLRPQIVRQ 110
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI E L+ + + + I + + G+ + L + I +
Sbjct: 111 LIDERLRMEAMLERHINVPVAQIAAAISGIEQRNGMPENSLRNRLAQDSISLTTLIDQIR 170
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSI--PDNKLQNQG 196
+Q W V++ + + EI +K +Y+I + + P +
Sbjct: 171 VQVGWSQVLRMETGSRGRITATEIQQRTDALKREDGKPQYMISEIFVPVEDPHHPETELK 230
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255
F + I++ E P +F+ + G + E L P+ + +K
Sbjct: 231 FTETIIQELREG-APFPIV---AAQFSQSQSALEGGLLGWTQEDSLDPEVVEVARKMPDG 286
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
+NP G + ++R +G E+A + P
Sbjct: 287 AISNPIRVAGGYVIATVNNRRTVGHEMATILNIHQAFLP 325
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
P N ++ ++ A + ++ K C+++E K + L L+PQ +
Sbjct: 329 PLNPQDPSDQQKQTLQQASDLAGKV-KSCDEMETLNKKFGEKHPTDPGELRVDRLNPQMR 387
Query: 248 NLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+L+ ++P V+ G+ I +C + + + + ++ Q ++E+ + +
Sbjct: 388 EVLEHLQPGQASHPLVSMDGIALIMVCKREERNVALQTPSEIADQLLNERVEQTSRQLDR 447
Query: 307 KLRSNAIIH 315
L A+I
Sbjct: 448 DLHRRAVID 456
>gi|239996025|ref|ZP_04716549.1| survival protein surA [Alteromonas macleodii ATCC 27126]
Length = 427
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 103/268 (38%), Gaps = 12/268 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQKINGE--L 72
L++ ++ S M R+ ++ V+ + +I KR A Q++ + L
Sbjct: 7 ALMLGALLSFNSVAQEVMLDRVAVIVDQGVVLESEIDALVQDVKRNAEANNQQLPSDRAL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
A++ LI ++L+ Q E+ GI + A N + E+ + L +GI +
Sbjct: 67 RTQAIERLITKSLQLQMAERMGIRISDPQLEQTISNIAANQNATIEELRAQLAAEGIAYD 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+++ + + I +V + + + E+E + + + T EY + +L P
Sbjct: 127 DYREDIREEVIMGEVRRANVRRRVYITPQEIETLIDLMEQQGATQAEYRLGHILIGFPPE 186
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ D S L D K+ +S ++ G +L + + F
Sbjct: 187 PTDEDIQSARERADKVISLLESGSDFAKIAIASSSGNEALEGGDMGWLNINAMPTLFAEA 246
Query: 250 LK-KSQNNTTNPYVTQKGVEYIAICDKR 276
++ K ++ P + G + + D R
Sbjct: 247 IQNKDKDALVGPIRSGAGFHILKVLDTR 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ +TV E R +L + + + ++ + + +E D +L K S+
Sbjct: 274 RGIEKVTVEEVNSRHIL--VKPSIILSEDKAKAMLNRFKEEVKNGEADFAELAKEHSEDP 331
Query: 228 DVSIG--KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIA 283
++ + + ++ P+F++ L + + P T G I + ++R D +
Sbjct: 332 GSALRGGELGWSDPNNYVPEFKDALAQLEPGEFSEPVRTVHGWHLIQLIERRIDDATDKR 391
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + +++++R A +
Sbjct: 392 KEDKAYQLIFNRKFSEETENWLREMRDAAYVE 423
>gi|91794237|ref|YP_563888.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
denitrificans OS217]
gi|121956465|sp|Q12K61|SURA_SHEDO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|91716239|gb|ABE56165.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
denitrificans OS217]
Length = 434
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 106/314 (33%), Gaps = 15/314 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K ++ + + R+ IN +I + +I +A ++
Sbjct: 1 MKHSKKIVTALLALAMSQTVMAAPVALDRVSVQINDGIILESEIGNMLATVRANANKSNQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q E+ G+ ++ A++ L+ L
Sbjct: 61 TLPSEQALRTQVIERLILTRLQLQMAERIGLQIGDLQLDQTIESIAKDQKLTVSQLQQQL 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
+ G+ + +++ L + ++ + + EI + + + E+ I
Sbjct: 121 ENDGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEISGLVKLMQEQGLKEVEFQIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKAQYLLESD 241
+L +P Q + + RL +D + +S + G Y+ ++
Sbjct: 181 ILIDVPSEPSSEQLEASSKRANIVLKRLNEGEDFRSTAIASSSGPKALEGGIWDYMNINE 240
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKI 297
+ F ++ ++ + P + G I + D R L E ++ + +P
Sbjct: 241 MPTLFAEVVNGAKVGDIIGPIKSGSGFHIIKVMDARGLQTKEVEEVKSRHILLKPSPILS 300
Query: 298 EKHEAEYVKKLRSN 311
E+ + +
Sbjct: 301 EERAKAMLVNFQKQ 314
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ V E R +L + + ++ + + + ++ L D +L + S+
Sbjct: 276 RGLQTKEVEEVKSRHILLK--PSPILSEERAKAMLVNFQKQILSGEADFAELARQYSEDP 333
Query: 228 D--VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + P+F L +N + P+ T G + DKR
Sbjct: 334 GSAAKGGELGWSSPDVYVPEFAQTLNSLKENEMSEPFRTTHGWHLTQLMDKRKTDATEQF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K + ++ ++RS+A I +
Sbjct: 394 NSNRAHQLIFRRKFNEELQAWLDEMRSDAYIEVF 427
>gi|326794311|ref|YP_004312131.1| Chaperone surA [Marinomonas mediterranea MMB-1]
gi|326545075|gb|ADZ90295.1| Chaperone surA [Marinomonas mediterranea MMB-1]
Length = 419
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 105/306 (34%), Gaps = 14/306 (4%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----EL 72
+ +L I + + + + + ++ + + + DI+ R ++K + G +
Sbjct: 4 KLFLLLSIVVTMNSPLFAAPKLLDGVVAIVDSQPLLESDINTRFQVIKDRIPGGVMTAGI 63
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ + +LI ET++ ++ GI + + A+ L +QGI +
Sbjct: 64 RRQILNQLIEETVQINYGKRLGIRIPQENTDAAVLNVAQKFSTDLGGLKQLLSRQGIDYS 123
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDN 190
++Q + + + V + + E EI +N E +R ++
Sbjct: 124 RYRQQIENEILINAVKQRVIKDRISITEQEISDFISASQNTQSSKNELHLRHIIV----- 178
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ +N+ +IK N+ ++ + G + S L F +
Sbjct: 179 RAKNETEALAKIKQIASGIASENDFINQAITYSDGQFALEGGDLGWRPVSQLPALFTKAI 238
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYVKK 307
+ P + G + + +KR ++ + Q + E+ + +
Sbjct: 239 NTQKGPLIGPLKSNAGYHLLWVIEKRSANVQLQAQTKTRHILLQPNEIRTEQQTVALINE 298
Query: 308 LRSNAI 313
L A+
Sbjct: 299 LYKRAM 304
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 51/153 (33%), Gaps = 8/153 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
AN Q R L++ + + KR E+ + +
Sbjct: 266 ANVQLQAQTKTRHILLQPNEIRTEQQTVALINELYKRAMSGEDFAGLASEYSDDQGSTLQ 325
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR-DLGGEI 282
G ++ + P F+ ++ ++ + P+ +Q G + + D+R + E
Sbjct: 326 G------GDLGWVKLGMMVPAFEKVMTATKTGAVSKPFRSQFGWHILKVEDRRKEDISES 379
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + + ++ +L+ +A I
Sbjct: 380 VKQQQAEKALVAQKQDFVLSNWLDELKESAFID 412
>gi|315127730|ref|YP_004069733.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas sp.
SM9913]
gi|315016244|gb|ADT69582.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas sp.
SM9913]
Length = 431
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 99/275 (36%), Gaps = 15/275 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
KLLT+ + C ++ + ++ +N VI ++ + +K Q
Sbjct: 5 KLLTSAVLTFSLCQS---AFAAPVEIDKVIGIVNQGVILKSEVDTIVDRVKKQAEKQNQQ 61
Query: 72 ------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L A++ L+ +TL Q E+ G+ + ++ A+ G + D ++
Sbjct: 62 LPKDETLRVQAIERLVNQTLMMQMAERMGLEISDSQLDQTLANMAKEQGGTIADLRRTIE 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM--KNITVREYLIRTV 183
G +++ + + V + + + + EI + M + EY I +
Sbjct: 122 ASGESFQAYREEIRKEITTQQVTRANVDRRIYVSDQEIDNLLKIMDSQGQNAEEYDIGHI 181
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDL 242
L IP + K D L ++ + +S + G+ ++ +++
Sbjct: 182 LIDIPSGAAADDVSSAKTRADKVIELLEDGQEFKRIAISSSSGSKALEGGQLGWMGINEM 241
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F +K K ++ P + G I + D R
Sbjct: 242 PSLFAEAVKGKKKDAIIGPLRSGAGFHIIKVQDVR 276
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + + + E R +L P L + ++ R D +L K S
Sbjct: 273 QDVRGRQVVETTEVKSRHILIK-PSIILSEEKARTMLAGFVKDLRA-GDVDFAELAKEHS 330
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ + G+ + + P F++ LL +N + P+ +Q G + + DKR
Sbjct: 331 QDPGSALKGGQYDWTDPTTYVPAFRDTLLSLDKNEISEPFRSQFGWHIVQLLDKRVADKT 390
Query: 282 IALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K + K ++ + +++R A + +
Sbjct: 391 EQAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427
>gi|239906716|ref|YP_002953457.1| putative peptidyl-prolyl cis-trans isomerase [Desulfovibrio
magneticus RS-1]
gi|239796582|dbj|BAH75571.1| putative peptidyl-prolyl cis-trans isomerase [Desulfovibrio
magneticus RS-1]
Length = 371
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 60/346 (17%), Positives = 118/346 (34%), Gaps = 40/346 (11%)
Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
T+ + + D + + +F ++ + + R+ +NG++IT D++ R+A
Sbjct: 31 TAALAPFMEDTLPQIAKFFGVLALLASLATPAGAAELVDRVVAVVNGKLITLFDVNTRVA 90
Query: 62 LLKLQKIN----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+ Q +L + ++ +I + L + E K +T ++ + +
Sbjct: 91 DMVKQTQGVALKPDDPRLDDLRRQVLESMITDMLIESEANKLKVTVSDTEIDSQIEEIKK 150
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQK 169
LS + F + L K+G+ F+ + + SI ++ K + EI K K
Sbjct: 151 KNNLSQQQFVTELAKEGLTLKQFRDKMRLDSIKKRLLGFMVHRKVLVTDDEIRDYYEKNK 210
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD----CNKLEKFASK 225
+ L P + K AEE R R+ + +KF+
Sbjct: 211 GSLSAAKSVLG-------PKVSGGLGFIMVPNKKQAEELRDRINSGSMSFADAAKKFSIG 263
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI-- 282
G + DL P ++ L + P + G + + E
Sbjct: 264 PGRDQGGDLGDVQIKDLAPPLRSALTAVPPGQVSEPVLLD-GKAVLLVQRTASAPAEKPA 322
Query: 283 -------------ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A K + K +K EY+ LRS A++
Sbjct: 323 APAAAAGSNPSYEAAKEQIQELLYKQKFDKLFQEYIDNLRSKAVVE 368
>gi|319796618|ref|YP_004158258.1| sura domain [Variovorax paradoxus EPS]
gi|315599081|gb|ADU40147.1| SurA domain [Variovorax paradoxus EPS]
Length = 469
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 96/266 (36%), Gaps = 13/266 (4%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELI 81
+ + I +N E IT+ D+ R+ L + GEL ++ ++ LI
Sbjct: 51 ASPSAAPVQRAAEFIVALVNSEPITNTDVQSRVTRLIKENPDAERVPRGELTRLVLERLI 110
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
VE + Q +++GI D ++ AR +S + + +GI F++ L Q
Sbjct: 111 VERAQLQLAKENGIKVDDVAIDQAEQTVARQNEISLVELRRRVAAEGIALADFRKDLRDQ 170
Query: 142 SIWPDVVKNDFMLKYGNLEMEI-----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + + K + E KN ++ + VL +P+N Q
Sbjct: 171 LLLTRLRDREVESKVKISDSEADEYLRDQRNSNTKNAALQNLNLAQVLVVLPENATDAQV 230
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQ- 254
++ R R +D KL + S D + G P F + ++ +
Sbjct: 231 AAAQKKAQGLAERARAGEDFEKLVRENSDSPDRANGGAIGMRSADRYPPLFVDAVQSTAV 290
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGG 280
N P + G + + K +G
Sbjct: 291 NGIAGPVRSSAGFHVLKVLAKAQIGS 316
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 5/157 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + + TV + +R +L ++ + ++ + + D L +
Sbjct: 309 LAKAQIGSLDATVTQTQVRHILLL--NDPKRTTAQAVAQLAEFKRRVQAGTADFAGLARD 366
Query: 223 ASKIHDVS-IGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ G + P+F+ + S ++P V++ GV I + +RD
Sbjct: 367 NSQDASAKEGGDLGWSRPGQFVPEFEEAMDRLSPGQISDPVVSRFGVHLIQVVGRRDSKL 426
Query: 281 EIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + +IE+ +V+++R+ A + Y
Sbjct: 427 TQSEQREAARNVLREQRIEEAFTTWVQEVRARAYVEY 463
>gi|290474826|ref|YP_003467706.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Xenorhabdus
bovienii SS-2004]
gi|289174139|emb|CBJ80926.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Xenorhabdus
bovienii SS-2004]
Length = 416
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 97/276 (35%), Gaps = 17/276 (6%)
Query: 52 TDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ D+ +++ +KL + L ++ LI++ + Q ++ IT ++
Sbjct: 20 LESDVDEQLQSVKLSAKHAGQQIPDEKALRHQILERLIMDDIILQMAKQMQITIPDQVLD 79
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A + ++ L +G+ N ++ + + I +V N+ + L E+
Sbjct: 80 STIANIAAQNHMGLDELKKNLTAEGLNFNTYRNQIRKEMIIAEVRNNEIRRRVTILPQEV 139
Query: 164 PANKQKM--KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
A + + +N E + +L + +N Q Q I + S L+ D KL
Sbjct: 140 EALAKNLSSENNQNTELNVSNILIPLRENPSQAQVEKATAIINKILSELKNGADFGKLAI 199
Query: 222 FASKIHDV-SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR--- 276
S G + +L F L+ + + P + G + I D R
Sbjct: 200 TYSGDTQALKGGNMGWRKLQELPSLFAEQLQSAHKGQIIGPIRSGVGFHILKINDIRGSN 259
Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ ++ + +P + + KLR
Sbjct: 260 MPQVAATEVNARHILLKTSPIMTDDQARSTLMKLRE 295
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 6/153 (3%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
M + E R +L + + + + E L N +
Sbjct: 254 DIRGSNMPQVAATEVNARHILLKT--SPIMTDDQARSTLMKLREEILSGKTTFNAAAEKY 311
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279
S+ + G+ + + S P F++ L+K + + P + G I + D R +
Sbjct: 312 SEDPGTAMRGGELGWNVPSTYAPAFRDALVKLKKGELSQPVHSTFGWHLIQLIDTRKVDR 371
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ A K K+ + +++ LR++A
Sbjct: 372 TDSAQKDNAYRLLLNRKLGEETQNWMQDLRASA 404
>gi|319778501|ref|YP_004129414.1| Survival protein SurA precursor [Taylorella equigenitalis MCE9]
gi|317108525|gb|ADU91271.1| Survival protein SurA precursor [Taylorella equigenitalis MCE9]
Length = 491
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 102/298 (34%), Gaps = 29/298 (9%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ +I +N EVIT GD + R+ L++ + ++ +Q LI E L ++ G+T
Sbjct: 40 ATEQILAVVNDEVITMGDFASRLNTLRISGQH-FSDEAVLQSLIDEKLMDTFAKERGLTV 98
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
V A GL+ E + + I + + + + Q + D+ +
Sbjct: 99 SDQRVAQAIQNIAAQNGLTPEQMKAASSQYNINWDEYLKNIRQQILIEDLKAAIIRDRIN 158
Query: 158 NLEMEIPA-------------------NKQKMKNITVREYL------IRTVLFSIPDNKL 192
+I A + K V +Y ++ + +P+
Sbjct: 159 ITPHDIEAYLAQNPTGLPKGYKEPVKVEPRFEKRQVVEQYFVPKAISLQHIYIRVPEGSS 218
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
K + S++R + +++ + G + D F N K
Sbjct: 219 PETVAAAKAKANEALSKIRKGQKFADVARQYSDGPEAANGGNLGIRMNEDWPALFMNATK 278
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKK 307
+ T+ + G + + ++R L + + + P ++ + E +K+
Sbjct: 279 NVRDGRTSGVFQAANGFHILRVVERRGLVDQRVKTVNVRLPDPPQPQLSEKEKAAIKE 336
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 62/170 (36%), Gaps = 4/170 (2%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V E K + V E +R +L +I + Q +K + A +
Sbjct: 314 VNVRLPDPPQPQLSEKEKAAIKEGPVEVEESHVRHILVAINPV-VDEQKAYEKIVDIANQ 372
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266
+ + + EK++ G +++ P F Q N + P T+ G
Sbjct: 373 LKS-GAEFSDLAEKYSDDTSAPLGGDLSWIVRGSADPAFDQAAFSLPLNQVSEPIRTKFG 431
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKI-EKHEAEYVKKLRSNAIIH 315
+ + ++R L + ++ ++ + + E +++ +LR+ + I
Sbjct: 432 WHIMEVLERRSLDRKSDIRKDVAYEMLYQQQSENILEDWINQLRTQSYIE 481
>gi|304396535|ref|ZP_07378416.1| Peptidylprolyl isomerase [Pantoea sp. aB]
gi|304356044|gb|EFM20410.1| Peptidylprolyl isomerase [Pantoea sp. aB]
Length = 431
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 96/269 (35%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------E 71
+++ I ++ + + ++ +N V+ + D+ ++ +K Q
Sbjct: 6 MLILGVAISANTAFAAPQVVDKVAAVVNNGVVLESDVDGMMSTVKSQAQQAGQQLPDDKT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ I++ + Q +K+G+ ++ A +S + S L G+
Sbjct: 66 LRHQILERQIMDNIILQMGDKAGVQISDEQLDQAIQNIAAQNKMSLDQLRSRLAYDGMNY 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
+ ++ + + +V N+ + L E+ A + +N E + +L +P+
Sbjct: 126 SVYRSQIRKEMTIAEVRNNEVRRRITILPQEVDTLAKQIGSQNSQGTELNVSHILLPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
N Q Q Q+ + L+ D K+ S G + +L F
Sbjct: 186 NPTQQQVDEQETLAKQLVGELKNGADFGKMAVTYSADSQALKGGNMGWGKIEELPTLFAQ 245
Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 246 ALSSAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 59/149 (39%), Gaps = 4/149 (2%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + KN++V E R +L P L ++ + + A + R ++++
Sbjct: 274 RGENKNVSVTEVHSRHILLK-PSPILTDEQARAQLEQIANDIRSGKTTFAAAAKQYSDDP 332
Query: 227 HDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G + P F++ LL+ + T+ P + G I + D R + A
Sbjct: 333 GSANQGGDLGWTSPEVFDPAFRDALLRLKKGQTSQPVHSSFGWHLIQLLDTRQVDKTDAA 392
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R++A
Sbjct: 393 QKERAYRMLFNRKFAEEAQTWMQEQRASA 421
>gi|51246936|ref|YP_066820.1| hypothetical protein DP3084 [Desulfotalea psychrophila LSv54]
gi|50877973|emb|CAG37813.1| hypothetical protein DP3084 [Desulfotalea psychrophila LSv54]
Length = 333
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/319 (16%), Positives = 117/319 (36%), Gaps = 20/319 (6%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------- 66
L T ++ IF ++ + ++ + ++ +N EVIT +++ A +K +
Sbjct: 14 LRTSYLSCIFTLILLSPLQAQVI-DKVVAVVNNEVITLSELNAETAEIKHKITETAPADQ 72
Query: 67 --KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ E + A+ +I + L Q+ +++ + V + LS E F L
Sbjct: 73 QEEAMAEAREGALNSIIDKKLIAQKAKEARVFVSDEEVEGTIAGIQKRASLSREQFIEEL 132
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRT 182
K G+ N ++ + Q + V+ D K E +I +K I + EY +
Sbjct: 133 KKSGLSFNTYQNNIRSQLLQRKVINYDIRSKIVIPESQIREYYEKEYTINAQDGEYYLLQ 192
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ F + ++ + K ++ EK+++ G + D+
Sbjct: 193 IGFDWDKEEAGSKEKTLQFAKRIHAIAVKGQDFGALAEKYSTLPSAKDRGDIGFFAIDDM 252
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI-----ALKAYLSAQNTPTK 296
+ +N + G ++ + +K + A+ +
Sbjct: 253 SENMARAISPLKPGEVSNIIESPAGYQFFKVLSGDQNNSISKAPYATVKEVIQAKLFEIQ 312
Query: 297 IEKHEAEYVKKLRSNAIIH 315
++K + +VK+L+ NA I
Sbjct: 313 MQKDFSSWVKELKENAYIQ 331
>gi|126173223|ref|YP_001049372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS155]
gi|125996428|gb|ABN60503.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS155]
Length = 434
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 112/312 (35%), Gaps = 21/312 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+K + + + + R+ IN ++ + +I+ I +K
Sbjct: 1 MKPSKHLIFALFALAISQPTLAAPQPLDRVAVQINDGIVLESEITNMIDTVKANAKTANQ 60
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ AR +S +
Sbjct: 61 SLPSDSALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQAIENIAREQKISVAQMQQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ +G+ + +++ L + ++ + + EI + +Q MK++ EY
Sbjct: 121 ESEGLSFSQYREQLREEITLGEIQRIQVQRRIQVSPQEITSLVKLIQEQGMKDV---EYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P+N Q + + RL+ +D + +S + G Y+
Sbjct: 178 IGHILIDVPNNPTSEQLESSSKRANIVLERLKSGEDFRRTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ ++ + P + G I I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVINGAKTGDIIGPIKSGAGFHIIKIMDARGLQTKEIEEVRARHILLKPSP 297
Query: 295 TKIEKHEAEYVK 306
E ++
Sbjct: 298 ILSEDRAKAMLE 309
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 57/156 (36%), Gaps = 10/156 (6%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + + +++ +K + L + S+
Sbjct: 276 RGLQTKEIEEVRARHILLKPSPILSEDRAKAMLEQFLKQIRSGEAKF----EDLARQYSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G+ + S P+F L + + + P+ T G + ++R
Sbjct: 332 DPGSATKGGELGWAEPSIYVPEFAQTLNSLKTDQISEPFRTTHGWHITQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + Q K + ++ ++RS+A I +
Sbjct: 392 QFNSNRAHQLIFRRKFNEELQNWLDEMRSDAYIEIF 427
>gi|121606958|ref|YP_984287.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
gi|120595927|gb|ABM39366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
Length = 469
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 95/300 (31%), Gaps = 25/300 (8%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------NGELEKIAVQELIVET 84
+ + I +N E IT+ ++ R LL+ ++ EL ++ +I +
Sbjct: 56 AQQQADFIVVVVNSEPITNNEV--RTKLLRTEQQLKQQSIALPPRSELMPQLLERMISDK 113
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
+ Q + +G D N V AR ++ ++ L GI F+ + + +
Sbjct: 114 AQLQAAQATGFKIDDNAVEGAVQTVARQNQITVDELRRRLKADGIDYAQFRSEIRDELLI 173
Query: 145 PDVVKNDFMLKYGNLEMEIP------ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + + + EMEI K + +L ++P+N Q
Sbjct: 174 SRLRQREVESRINVSEMEIDDYLRSQEGKPGAAGAAPAALNLAEILVAVPENATPEQVAS 233
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
+ R + D + ++ + G+ P F +
Sbjct: 234 LQAKARQVLERAKAGADFAALATEVSAAASRSNGGQIGLRSADRYPPLFVEATQSLPAGG 293
Query: 257 TTNPYVTQKGVEYIAICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P + G + + +KR G ++ + TP E E + +
Sbjct: 294 LAGPVRSAAGFHILKVIEKRQGGLPDAVITQTHARHILLRLTPQLTEAAAVEKLAGFKKR 353
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 58/157 (36%), Gaps = 5/157 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
I + + + + + R +L + + +++ ++ + D L +
Sbjct: 310 IEKRQGGLPDAVITQTHARHILLRL--TPQLTEAAAVEKLAGFKKRIVAGQADFAALARE 367
Query: 223 ASKIHDVS-IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ G ++ P+F+ ++ + N ++P V++ GV + + ++R+
Sbjct: 368 NSQDASAKQGGDLGWVPGGAFVPEFEKVMNALAPNQVSDPLVSRFGVHLVQVLERREAPV 427
Query: 281 EIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + K + + + +R A + +
Sbjct: 428 SPRDQREMVRGMLREKKQNEAYVRWAEDIRGRAYVEF 464
>gi|297180116|gb|ADI16339.1| parvulin-like peptidyl-prolyl isomerase [uncultured bacterium
HF130_01F24]
Length = 436
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 47/315 (14%), Positives = 115/315 (36%), Gaps = 18/315 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-AMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
K L + +F +S + + R+ ++ VI ++ RI L+
Sbjct: 10 KSLAVSIAITVFATFVGLSASAQRVLLDRVIALVDEGVILQSELDIRINDLQQAAARDGR 69
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
E+ ++ LIVE ++ Q E+ I +D +T+N A N+ +S +++ + L
Sbjct: 70 PLPPESEIRDDVLEALIVENIQLQMAEQVSIRYDDDTINRVLSNMAENSNMSFDEYVTAL 129
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
+ G+ ++ + Q + ++ + + E EI N + + + ++ I
Sbjct: 130 ENGGVYLQT-REQVRQQMMIQELQRGMVNRRITITEQEIDNFLNSEMGREVMAPDFFIDH 188
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLES 240
++ + + R +++ + ++ AS+ + I +
Sbjct: 189 MVVVASGTDSDEEKQQKLRFAADLTAQVEEGSNFLQVRAEASESSNFQIQSTDFGWRKAE 248
Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT---K 296
L F ++ ++ + P G I + KR +I + + +
Sbjct: 249 QLPILFSSIVVEMKEGEIAGPIEAGNGYHVIFLAGKRGGTEQIVKQTNIRHIMLSPNEIR 308
Query: 297 IEKHEAEYVKKLRSN 311
E+ +++LR
Sbjct: 309 NEEQTITEIQELRQR 323
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/329 (13%), Positives = 112/329 (34%), Gaps = 44/329 (13%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKINGELEKIAVQELIVET 84
+ + + + + NG V T + +++ + +LQ+ ++ I
Sbjct: 111 LSNMAENSNMSFDEYVTALENGGVYLQTREQVRQQMMIQELQRGMVNRRITITEQEIDNF 170
Query: 85 LKKQEIEKSGITF---------------DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L E+ + + + A + E+ S+FL +
Sbjct: 171 L-NSEMGREVMAPDFFIDHMVVVASGTDSDEEKQQKL-RFAADLTAQVEEGSNFLQVRAE 228
Query: 130 GDNHFKQYL-AIQSIWPD-----------VVKNDFMLKYGNLEMEIP------ANKQKMK 171
+ + W VV+ G +E A K+
Sbjct: 229 ASESSNFQIQSTDFGWRKAEQLPILFSSIVVEMKEGEIAGPIEAGNGYHVIFLAGKRGGT 288
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDV 229
V++ IR ++ S N+++N+ I++ + R+ +D + + S V
Sbjct: 289 EQIVKQTNIRHIMLS--PNEIRNEEQTITEIQELRQ-RILSGEDFAVIARQHSDDATSVV 345
Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAY 287
+ G ++ E + P+F+ +++ +N + P+ + G + +R+ + ++
Sbjct: 346 AGGDLDWVNEGGMPPEFEAVIQVLEENTLSEPFESATGWHIAEVLGRRESDLSQQYTRSQ 405
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K + ++ ++R A + +
Sbjct: 406 AANSLRNRKFDLELQNWMIEIREKAFVEF 434
>gi|167814327|ref|ZP_02446007.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 91]
gi|122070637|sp|Q63X78|SURA_BURPS RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 448
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 111/288 (38%), Gaps = 15/288 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K+ + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 3 KILRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 62
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 63 ARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGM 122
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 123 QLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNA 182
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P N Q V ++ + + L + +L K S+ D
Sbjct: 183 GSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKK 242
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
G + + L + + K G E + + ++R
Sbjct: 243 GGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 290
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|77361548|ref|YP_341123.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas
haloplanktis TAC125]
gi|122070669|sp|Q3IFD3|SURA_PSEHT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|76876459|emb|CAI87681.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas
haloplanktis TAC125]
Length = 431
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 104/275 (37%), Gaps = 15/275 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------ 67
KLLT+ + I C ++ + ++ +N VI ++ + +K Q
Sbjct: 5 KLLTSAVLSISLCQS---AFAAPVEIDKVIGIVNQGVILKSEVDTIVNRVKKQAEEQSQE 61
Query: 68 --INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ L AV+ L+ +TL Q E+ G+ + ++ A+ G S D ++
Sbjct: 62 LPKDETLRVQAVERLVNQTLMMQMAERMGLEISDSQLDQTLASMAKEQGGSIADLRRTIE 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTV 183
G +++ + + V++ + + E E+ + M++ EY I +
Sbjct: 122 GSGESFQAYREEIRKEITTQQVMRANVDRRVYVSEQEVDNLLKIMESQGQNAEEYDIGHI 181
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDL 242
L IP + ++ K D L ++ + +S + G+ ++ +++
Sbjct: 182 LIDIPSDASADEIASAKTRADKVIELLNDEQEFKRIAISSSSGSQALEGGQLGWMGINEM 241
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F +K K Q P + G I + D R
Sbjct: 242 PSLFAEAVKGKKQGAIIGPLRSGAGFHIIKVQDVR 276
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 95/302 (31%), Gaps = 46/302 (15%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+I K I ++ + N + ++ + LK E + G + + + + +
Sbjct: 133 EIRKEITTQQVMRANVDRRVYVSEQEVDNLLKIMESQ--GQNAEEYDIGHILIDIPSDA- 189
Query: 115 LSAEDFSSFLDKQGI------GDNHFKQYLA------------IQSIW----------PD 146
SA++ +S + + FK +A Q W +
Sbjct: 190 -SADEIASAKTRADKVIELLNDEQEFK-RIAISSSSGSQALEGGQLGWMGINEMPSLFAE 247
Query: 147 VVKNDFMLKYGNLEMEIP-------ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
VK + + + + E R +L P L +
Sbjct: 248 AVKGKKQGAIIGPLRSGAGFHIIKVQDVRGRQVVETTETRSRHILIK-PSIILSEEKARS 306
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNN 256
++ R D KL K S+ + G+ + + P F++ LL QN
Sbjct: 307 MLAGFVKDLRAD-KADFAKLAKEYSEDPGSALKGGEYDWADPTSYVPAFRDTLLSLKQNE 365
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P+ +Q G + + D R K + K ++ + +++R A +
Sbjct: 366 ISEPFRSQFGWHIVQLLDTRVADKTEQAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVE 425
Query: 316 YY 317
+
Sbjct: 426 IF 427
>gi|294139570|ref|YP_003555548.1| survival protein surA [Shewanella violacea DSS12]
gi|293326039|dbj|BAJ00770.1| survival protein surA [Shewanella violacea DSS12]
Length = 434
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 112/316 (35%), Gaps = 19/316 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------- 65
+K + + + R+ +N ++ + +I+ + +K
Sbjct: 1 MKPCKHLIIAFLTLASSHMVQAENTPLDRVSVQVNEGIVLESEITNMVTTVKTNASAAGQ 60
Query: 66 -QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ L ++ LIV L+ Q ++ G+ ++ A++ L+ + +
Sbjct: 61 SLPSDQALRTQVIERLIVTRLQMQMADRIGLHIGDLQLDQTIGNIAKDQKLTVDQMKHKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRT 182
+G+ +H+++ L + ++ + + EI + + E+ I
Sbjct: 121 GGEGMSWSHYREQLREEMTLGEIQRIQVQRRIQVSPQEINNLVNMIEEQGLKQTEFQIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA-QYLLESD 241
+L IP++ Q + R++ D + AS G Y+ ++
Sbjct: 181 ILIEIPNDPTSEQLEKASNRANKVLERVKDGGDFRRTAIAASAGPKALEGGIWDYMNINE 240
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKI 297
+ F +L + + P + G I + D R L + + ++ + +P
Sbjct: 241 MPTLFAEVLSDAKKGDIIGPIRSGAGFHIIKVIDARGLQTKEVKEVRSRHILIKPSPILS 300
Query: 298 EKHEA----EYVKKLR 309
E+ ++VK+LR
Sbjct: 301 EERAKAMLDKFVKQLR 316
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 53/153 (34%), Gaps = 4/153 (2%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226
+ ++ V+E R +L P L + K ++ R K++
Sbjct: 276 RGLQTKEVKEVRSRHILIK-PSPILSEERAKAMLDKFVKQLRAGDADFAALAHKYSEDPG 334
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G+ + + P F LK + N+ + P+ + G + + ++R
Sbjct: 335 SAAKGGELGWADPTVYVPAFSQTLKGLNVNDISEPFRSTHGWHIVQLEERRTTDATAKFN 394
Query: 286 AYLSAQNTP-TKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R+ A I +
Sbjct: 395 TNKAHQLIYRRKFNEELQTWLDEMRAEAYIEVF 427
>gi|332994413|gb|AEF04468.1| survival protein surA [Alteromonas sp. SN2]
Length = 426
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 104/273 (38%), Gaps = 15/273 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDIS------KRIALLKLQKIN 69
F++ + ++S+ S+A R+ ++ V+ ++ KR A Q +
Sbjct: 2 KFIIRALLVSAVLSFSSYAQEVMLDRVAVIVDQGVVLQSEVDALMNDVKRNAEANGQDLP 61
Query: 70 GE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ L A++ LI ++L+ Q ++ GI + A N + ++ L +
Sbjct: 62 SDRALRTQAIERLITKSLQLQMAQRMGIQISDPQLEQTIANIAANQNTTVDELRRQLRLE 121
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLF 185
GI +++ + + + +V + + + + E E + + EY + +L
Sbjct: 122 GIAYEDYREDIREEIVMGEVRRANVRRRVYITDQERETLIELMEQQGAEQEEYRLGHILI 181
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHP 244
P + Q + D S L D K+ +S ++ G +L + +
Sbjct: 182 GFPSDPSDEQIDAARERADKVLSLLNSGSDFAKIAIASSSGNEALEGGDMGWLNINAMPT 241
Query: 245 QFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F ++ K+++ P + G + + D R
Sbjct: 242 LFAEAIQGKAKDELVGPIRSGAGFHILKVLDTR 274
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVL--FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ +T+ E R +L SI ++ + + + K E + + +
Sbjct: 274 RGIEKVTIEEVNSRHILVKPSIILSEDKAKAMLVKFRAQLEAGEVEFEDLAKEHSEDPGS 333
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR-DLGGEIA 283
G+ + ++ P F++ L + S ++P + G I + D+R D E
Sbjct: 334 AL--KGGELGWSDPNNYVPAFKDALAQLSAGEYSDPVRSVHGWHLIQLIDRRVDDATERR 391
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + +++++R A I
Sbjct: 392 KEDKAYQLIFNRKFAEETENWLREMRDAAYIE 423
>gi|162149098|ref|YP_001603559.1| peptidyl-prolyl cis-trans isomerase SurA [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787675|emb|CAP57271.1| Peptidyl-prolyl cis-trans isomerase SurA [Gluconacetobacter
diazotrophicus PAl 5]
Length = 459
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 15/255 (5%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQ 88
I I+G ++T D+ R L L + L +++LI E L++
Sbjct: 58 ATSQDAIIAIIDGTLLTRRDVDNRGRLFALSAGLTLSDDVMARLRPQILRQLIDERLRQN 117
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E+ I + + R G+ L + GI + +Q W V+
Sbjct: 118 EMLSRHINVSPDQIAASIADIERRNGMPKNALRDRLAQDGISLTTMIDQIRVQLGWSQVL 177
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQG--FVQKRIKDA 205
+ + + EI ++ +++ +YLI + + D + F Q I++
Sbjct: 178 REEMGTRGRITAAEISQREEALRHEDGKPQYLISEIFIPVDDPRHSEDELKFTQTIIQEL 237
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
P + + + + G ++ E L PQ + K +NP
Sbjct: 238 RNG-APFPIVAAQFSQNQAALEG---GLMGWVQEDSLDPQVVEIAKAMPPGAISNPIRVA 293
Query: 265 KGVEYIAICDKRDLG 279
G + +R +G
Sbjct: 294 GGYVIATLNGRRVIG 308
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 2/135 (1%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ F+ P + + +K A++ + C +LE K D +
Sbjct: 321 FIPFTTPLDPQAPSEQQRDALKQAQQISTTV-HSCPELEAINHKFGDKHPSNPGDVQLER 379
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
++ Q Q +L + ++P V G+ + +C ++ + ++ Q + E+
Sbjct: 380 VNEQMQKVLTGLTPGQASHPLVAPDGIAVLMVCSRQQKNFAQQTPSDIADQLMNERAEQT 439
Query: 301 EAEYVKKLRSNAIIH 315
+ + L AII
Sbjct: 440 SRQLDRDLHRRAIIE 454
>gi|296134602|ref|YP_003641844.1| SurA domain protein [Thiomonas intermedia K12]
gi|295794724|gb|ADG29514.1| SurA domain protein [Thiomonas intermedia K12]
Length = 459
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 16/266 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVE 83
++ S S I + +VITD D+ R+ + Q +L + ++I E
Sbjct: 46 TFSSARTSDGIAAIVGNQVITDYDLQLRVEATRQQAQAAGATLPSAAQLRSQVLNQMIDE 105
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q E+ G+ + +T++ Q A N L+ + S ++K+G+G + ++ L + +
Sbjct: 106 VALAQYAEQIGMGVNQDTLDRAIAQVASNNKLTVPELRSAIEKEGMGWSTYRDQLKREIL 165
Query: 144 WPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + E EI + + Y I + + N + Q K
Sbjct: 166 ISRLRERSMAQLPTVSESEIDEFLSKQDAAAASPQAAYDIAQIFLPVAQNATEAQVAAVK 225
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258
+ DA +++L+ D +L S+ G + L F + ++ +
Sbjct: 226 QKIDAIDAKLKAGADFAQLATQDSQGEGAKRGGDLGMRPANRLPTLFVDTVRNLQPGQIS 285
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G + + + GE A
Sbjct: 286 PVIRSAAGFHILKLL---QVSGETAA 308
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 57/153 (37%), Gaps = 6/153 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + + T + +R ++ S + +++ + + + + +++ + +L
Sbjct: 300 LQVSGETAAPTTAMQSEVREIVLSASTDAQRIRAKAELDSIAQAVQNGKVQFSEKARELS 359
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ G ++L L P L + + + + P V V + + D+
Sbjct: 360 Q--DPATAAKGGALGWVLPGQLDPVLDAALQRLNPGDVSAPIVMGNKVVLLQLVDRAVRP 417
Query: 280 GEIALKAYLSAQNTP-TKIEKHEAEYVKKLRSN 311
E + K L+ + K + E V+ +R+
Sbjct: 418 LEASQKRALAREVLQRQKAAEDFDELVRDVRAR 450
>gi|53718302|ref|YP_107288.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei K96243]
gi|52208716|emb|CAH34652.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei K96243]
Length = 450
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 111/288 (38%), Gaps = 15/288 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K+ + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 5 KILRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 64
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 65 ARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGM 124
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 125 QLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNA 184
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P N Q V ++ + + L + +L K S+ D
Sbjct: 185 GSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKK 244
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
G + + L + + K G E + + ++R
Sbjct: 245 GGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 292
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 289 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 344
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 345 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 404
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 405 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 443
>gi|292489392|ref|YP_003532279.1| survival protein SurA [Erwinia amylovora CFBP1430]
gi|292898389|ref|YP_003537758.1| survival protein A [Erwinia amylovora ATCC 49946]
gi|291198237|emb|CBJ45343.1| chaperone (peptidyl-prolyl cis-trans isomerase) (survival protein
A) [Erwinia amylovora ATCC 49946]
gi|291554826|emb|CBA22684.1| survival protein SurA precursor [Erwinia amylovora CFBP1430]
Length = 431
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 4/210 (1%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ L+++ + Q+ +++G+ ++ A+ +S + S L G+
Sbjct: 65 TLRHQILERLVMDNILLQKAKQAGLQVSDAQLDQAIANIAQQNKMSIDQLRSRLAYDGMN 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIP 188
+++ + + +V ++ + L E+ A++ +N E I +L +P
Sbjct: 125 YASYREQIRKEMATSEVRNSEVRRRVTILPQEVDSLASQLASQNSAGTELNISHILLPLP 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF- 246
+N Q Q Q+ + S + D KL S G + +L F
Sbjct: 185 ENPTQQQVDDQENLAKQLVSEAKGGADFGKLAIAHSADPQALKGGNMGWGRIQELPSLFA 244
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
Q L+ + + P + G + + D R
Sbjct: 245 QALVTAKKGDIIGPVRSGVGFHILKVNDMR 274
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 84/298 (28%), Gaps = 63/298 (21%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+ +E+ ++ E+ + +T V+ Q A
Sbjct: 129 REQIRKEMATSEVRNSEVRRR-VTILPQEVDSLASQLASQNSAGTELNISHILLPLPENP 187
Query: 116 SAEDFSSF--LDKQGIG------------------DNHFKQYLAIQSIWPD--------- 146
+ + L KQ + K W
Sbjct: 188 TQQQVDDQENLAKQLVSEAKGGADFGKLAIAHSADPQALKG---GNMGWGRIQELPSLFA 244
Query: 147 --VVKNDFMLKYGNLEM-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+V G + ++ + ++I+V E R +L P + +
Sbjct: 245 QALVTAKKGDIIGPVRSGVGFHILKVNDMRGDNQSISVTEVHARHILLK-PSPIMTDDQA 303
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQN 255
QK + A + + ++ + + G + P F++ LL+ +
Sbjct: 304 RQKLQQVASDIKSGKLTFSAAAKQLSQDPGSANQGGDLGWSSAEVFDPAFRDALLRLKKG 363
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+P + G I + D R + A K + + K + ++++ R+ A
Sbjct: 364 QIGDPVHSSFGWHLIELMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAA 421
>gi|192358925|ref|YP_001981367.1| peptidyl-prolyl cis-trans isomerase SurA [Cellvibrio japonicus
Ueda107]
gi|190685090|gb|ACE82768.1| peptidyl-prolyl cis-trans isomerase SurA [Cellvibrio japonicus
Ueda107]
Length = 437
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 95/249 (38%), Gaps = 11/249 (4%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L K +++LIVE ++ ++ I+ D ++ + A+ +SA + L +QG+
Sbjct: 78 LNKQILEQLIVERIELGLAKRYDISIDEAEIDQAIARIAQKNQVSAAALEADLKRQGLDM 137
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPD 189
+ ++ L + + + E +I K T +Y I +L S+
Sbjct: 138 SGLREQLRKDLTINQLQQGVVNSRIKISEQDIDNFLASSDGKYATSPDYHIGHILISV-- 195
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLE---KFASKIHDVSIGKAQYLLESDLHPQF 246
+ + V++ A + +L + + ++ + G + + L F
Sbjct: 196 SSSADAEMVEQAENQANDIYKKLQGGADFAQMAISYSKDQAALQGGDIGWRKLAQLPELF 255
Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEA 302
++K S + P+ + G + ++R G ++ + ++ + + ++
Sbjct: 256 GNEMMKLSPGQVSKPFRSGAGFHILKNIEQRGGGAQMVEQTHARHILVKTSEIMDDRQAR 315
Query: 303 EYVKKLRSN 311
E + LR
Sbjct: 316 EKLLGLRER 324
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 60/154 (38%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
++ V + R +L + +++ + ++++ E R+ +D KL + S+
Sbjct: 284 EQRGGGAQMVEQTHARHIL--VKTSEIMDDRQAREKLLGLRE-RILKGEDFAKLARENSE 340
Query: 226 IHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GE 281
S G + P F+ + ++ + + P+ +Q G + + ++R +
Sbjct: 341 DTGSMLSGGDLGWSTPGMFVPAFEEAMAQTGIGDISRPFKSQFGWHILQVLERRQTDMSD 400
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + ++ ++ ++R A +
Sbjct: 401 RMKRNQAANVLRSRRFDEEFQLWLTQIREEAYVE 434
>gi|312173557|emb|CBX81811.1| survival protein SurA precursor [Erwinia amylovora ATCC BAA-2158]
Length = 431
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 4/210 (1%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ L+++ + Q+ +++G+ ++ A+ +S + S L G+
Sbjct: 65 TLRHQILERLVMDNILLQKAKQAGLQVSDAQLDQAIANIAQQNKMSIDQLRSRLAYDGMN 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIP 188
+++ + + +V ++ + L E+ A++ +N E I +L +P
Sbjct: 125 YASYREQIRKEMATSEVRNSEVRRRVTILPQEVDSLASQLASQNSAGTELNISHILLPLP 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF- 246
+N Q Q Q+ + S + D KL S G + +L F
Sbjct: 185 ENPTQQQVDDQENLAKQLVSEAKGGADFGKLAIAHSADPQALKGGNMGWGRIQELPSLFA 244
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
Q L+ + + P + G + + D R
Sbjct: 245 QALVTAKKGDIIGPVRSGVGFHILKVNDMR 274
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 84/298 (28%), Gaps = 63/298 (21%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-----------------GL 115
+ +E+ ++ E+ + +T V+ Q A
Sbjct: 129 REQIRKEMATSEVRNSEVRRR-VTILPQEVDSLASQLASQNSAGTELNISHILLPLPENP 187
Query: 116 SAEDFSSF--LDKQGIG------------------DNHFKQYLAIQSIWPD--------- 146
+ + L KQ + K W
Sbjct: 188 TQQQVDDQENLAKQLVSEAKGGADFGKLAIAHSADPQALKG---GNMGWGRIQELPSLFA 244
Query: 147 --VVKNDFMLKYGNLEM-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+V G + ++ + ++I+V E R +L P + +
Sbjct: 245 QALVTAKKGDIIGPVRSGVGFHILKVNDMRGDNQSISVTEVHARHILLK-PSPIMTDDQA 303
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQN 255
QK + A E + ++ + + G + P F++ LL+ +
Sbjct: 304 RQKLQQVASEIKSGKLTFSAAAKQLSQDPGSANQGGDLGWSSAEVFDPAFRDALLRLKKG 363
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+P + G I + D R + A K + + K + ++++ R+ A
Sbjct: 364 QIGDPVHSSFGWHLIELMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAA 421
>gi|209545159|ref|YP_002277388.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532836|gb|ACI52773.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 452
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 15/255 (5%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQK-------INGELEKIAVQELIVETLKKQ 88
I I+G ++T D+ R L L + L +++LI E L++
Sbjct: 51 ATSQDAIIAIIDGTLLTRRDVDNRGRLFALSAGLTLSDDVMARLRPQILRQLIDERLRQN 110
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E+ I + + R G+ L + GI + +Q W V+
Sbjct: 111 EMLSRHINVSPDQIAASIADIERRNGMPKNALRDRLAQDGISLTTMIDQIRVQLGWSQVL 170
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQG--FVQKRIKDA 205
+ + + EI ++ +++ +YLI + + D + F Q I++
Sbjct: 171 REEMGTRGRITAAEISQREEALRHEDGKPQYLISEIFIPVDDPRHSEDELKFTQTIIQEL 230
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
P + + + + G ++ E L PQ + K +NP
Sbjct: 231 RNG-APFPIVAAQFSQNQAALEG---GLMGWVQEDSLDPQVVEIAKAMPPGAISNPIRVA 286
Query: 265 KGVEYIAICDKRDLG 279
G + +R +G
Sbjct: 287 GGYVIATLNGRRVIG 301
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 2/135 (1%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ F+ P + + +K A++ + C +LE K D +
Sbjct: 314 FIPFTTPLDPQAPSEQQRDALKQAQQISTTV-HSCPELEAINHKFGDKHPSNPGDVQLER 372
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
++ Q Q +L + ++P V G+ + +C ++ + ++ Q + E+
Sbjct: 373 VNEQMQKVLTGLTPGQASHPLVAPDGIAVLMVCSRQQKNFAQQTPSDIADQLMNERAEQT 432
Query: 301 EAEYVKKLRSNAIIH 315
+ + L AII
Sbjct: 433 SRQLDRDLHRRAIIE 447
>gi|167579883|ref|ZP_02372757.1| survival protein SurA, putative [Burkholderia thailandensis TXDOH]
Length = 448
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 108/283 (38%), Gaps = 20/283 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-----AMSSRIRTTINGEVITDGDISKRIALL--KLQ 66
+ V + + P S ++ +++ + +N +VIT ++ +R+ L+ +LQ
Sbjct: 8 AAVAAGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQ 67
Query: 67 KINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ L + ++++E ++ Q + GI D+ TV + A+ G+ + +
Sbjct: 68 QQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMPLDQY 127
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVRE 177
+ ++ QG+ + F + + + + + + K + E+ A+++ ++
Sbjct: 128 KARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNAGAQQD 187
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-SIGKAQ 235
+ + P N Q ++ + + L + +L K S+ D G
Sbjct: 188 LRLEHIFVKAPTNAPQTDIDAAQKKAEGLLQQALASGTNFERLAKSQSEADDAKKGGDLG 247
Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
+ S L + + K G E + + D+R
Sbjct: 248 FKAPSSLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVDRR 290
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
++ A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VDRRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIEAGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQEGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|119944807|ref|YP_942487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas
ingrahamii 37]
gi|119863411|gb|ABM02888.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas
ingrahamii 37]
Length = 439
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 103/274 (37%), Gaps = 19/274 (6%)
Query: 21 VLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKINGE------ 71
+L+ + + + +A +I +N E+I D+ + ++ + N +
Sbjct: 7 ILLPLLFASLAATQVFAEKIPLDKIEAVVNQEIILSSDLQRAQLDIQERYKNSDQTLPSG 66
Query: 72 --LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L K + +LI + L+ Q ++ G+ + + Q A+ GL++E + L+KQG
Sbjct: 67 DKLTKQILDKLITDRLQLQIAQRIGLRINDAQLQQTVQQIAQKEGLTSEQLQAKLEKQGK 126
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F + + ++ + + + + ++ +++ + V
Sbjct: 127 NYAAFVDTIRDELTINEIRQIEVRRRITISDQDVEQMVKRINAEGQKNTQFSFVHLLFKL 186
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA----SKIHDVSIGKAQYLLESDLHPQ 245
+K + Q+ K A++ ++ + A G + +++
Sbjct: 187 DKESSAAEQQRIEKKAQDLVKKIKLG-ANASQLALLNSEGPKASEGGDWGWRTINEMPTL 245
Query: 246 FQNLL---KKSQNNTTNPYVTQKGVEYIAICDKR 276
F + + ++ + P+ + G+ I I DK+
Sbjct: 246 FAGIFNEQQTNKGDVIGPFKSDLGLHIIKIMDKK 279
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K+ +N+ E R +L I N + + QK + + + K L + S+
Sbjct: 277 DKKGAQNVMTVEVNARHIL--IKSNIILSDQKAQKLLTGYRQDIINGKKSFAALAREYSQ 334
Query: 226 IHDVSI--GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
++ G + S P+F+ L L + P+ T G + + +KR+ +
Sbjct: 335 DPGSAVKGGDLGWADPSMYVPEFKELALSLPVGEISQPFRTMHGWHILEVINKRE--SDT 392
Query: 283 ALKAYLSAQ---NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+A + ++ ++R A I +
Sbjct: 393 TEQATKQKAYSLLFQQRFPAEVYAWMNEIRQEAYIKIH 430
>gi|53725016|ref|YP_102044.1| survival protein SurA [Burkholderia mallei ATCC 23344]
gi|67641452|ref|ZP_00440230.1| chaperone SurA [Burkholderia mallei GB8 horse 4]
gi|121598370|ref|YP_994032.1| putative survival protein SurA [Burkholderia mallei SAVP1]
gi|124385555|ref|YP_001028304.1| putative survival protein SurA [Burkholderia mallei NCTC 10229]
gi|126449043|ref|YP_001081948.1| putative survival protein SurA [Burkholderia mallei NCTC 10247]
gi|254176840|ref|ZP_04883497.1| putative survival protein SurA [Burkholderia mallei ATCC 10399]
gi|254203730|ref|ZP_04910090.1| putative survival protein SurA [Burkholderia mallei FMH]
gi|254208705|ref|ZP_04915053.1| putative survival protein SurA [Burkholderia mallei JHU]
gi|81685183|sp|Q62MM4|SURA_BURMA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|52428439|gb|AAU49032.1| survival protein SurA, putative [Burkholderia mallei ATCC 23344]
gi|121227180|gb|ABM49698.1| putative survival protein SurA [Burkholderia mallei SAVP1]
gi|124293575|gb|ABN02844.1| putative survival protein SurA [Burkholderia mallei NCTC 10229]
gi|126241913|gb|ABO05006.1| putative survival protein SurA [Burkholderia mallei NCTC 10247]
gi|147745242|gb|EDK52322.1| putative survival protein SurA [Burkholderia mallei FMH]
gi|147750581|gb|EDK57650.1| putative survival protein SurA [Burkholderia mallei JHU]
gi|160697881|gb|EDP87851.1| putative survival protein SurA [Burkholderia mallei ATCC 10399]
gi|238522391|gb|EEP85835.1| chaperone SurA [Burkholderia mallei GB8 horse 4]
Length = 448
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 110/288 (38%), Gaps = 15/288 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 3 KTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 62
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 63 ARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGM 122
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 123 QLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNA 182
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P N Q V ++ + + L + +L K S+ D
Sbjct: 183 GSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKK 242
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
G + + L + + K G E + + ++R
Sbjct: 243 GGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 290
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGEPVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|294338549|emb|CAZ86878.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase, surA
[Thiomonas sp. 3As]
Length = 472
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 16/266 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVE 83
++ S S I + +VITD D+ R+ + Q +L + ++I E
Sbjct: 59 TFSSARTSDGIAAIVGNQVITDYDLQLRVEATRQQAQAAGATLPSAAQLRSQVLNQMIDE 118
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q E+ G+ + +T++ Q A N L+ + S ++K+G+G + ++ L + +
Sbjct: 119 VALAQYAEQIGMGVNQDTLDRAIAQVASNNKLTVPELRSAIEKEGMGWSTYRDQLKREIL 178
Query: 144 WPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + E EI + + Y I + + N + Q K
Sbjct: 179 ISRLRERSMAQLPTVSESEIDEFLSKQDAAAASPQAAYDIAQIFLPVAQNATEAQVAAVK 238
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258
+ DA +++L+ +L S+ G + L F + ++ +
Sbjct: 239 QKIDAIDAKLKAGAAFAQLATQDSQGEGAKRGGDLGMRPANRLPTLFVDTVRNLQPGQIS 298
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G + + + GE A
Sbjct: 299 PVIRSAAGFHILKLL---QVSGETAA 321
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 57/153 (37%), Gaps = 6/153 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + + T + +R ++ S + +++ + + + + +++ + +L
Sbjct: 313 LQVSGETAAPTTAMQSEVREIVLSASTDAQRIRAKAELDSIAQAVQNGKVQFSEKARELS 372
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ G ++L L P L + + + + P V V + + D+
Sbjct: 373 Q--DPATAAKGGALGWVLPGQLDPVLDAALQRLNPGDVSAPIVMGNKVVLLQLVDRAVRP 430
Query: 280 GEIALKAYLSAQNTP-TKIEKHEAEYVKKLRSN 311
E + K L+ + K + E V+ +R+
Sbjct: 431 LEASQKRALAREVLQRQKAAEDFDELVRDVRAR 463
>gi|260221806|emb|CBA30735.1| hypothetical protein Csp_C25050 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 728
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 93/288 (32%), Gaps = 18/288 (6%)
Query: 42 IRTTINGEVIT----DGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93
I +N E IT ++ + L Q EL ++ ++ +I + + Q +
Sbjct: 11 IVAVVNSEPITFQELSIEVRRVSQQLTQQGQAAPAPEELRRLVLERMINDKAQLQLAREQ 70
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
GI D+ ++ A G+ L K G+ F+ L Q + + +
Sbjct: 71 GIRMDATAIDRAEQNVASQNGVDVLALRQKLAKDGVTVQSFRDGLRDQLTLSRLHEREVE 130
Query: 154 LKYGNLEMEIPANKQKMK----NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
++++ Q+ + + +E I +L +P+ + R
Sbjct: 131 SSIKVSDVDVDRAIQEQQANNTDPFAQELNIAQILIVVPEKANGEEAAALYVKAQRVLQR 190
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVE 268
R +D L K S + G+ L P F N + + T G
Sbjct: 191 ARDGEDFTNLVKEFSAADRNNGGQIGLRRGDRLPPSFVNATQGLKVGEIADVVRTGAGFH 250
Query: 269 YIAICDKRDLGGEI-----ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +++ + ++ +N+P + + R
Sbjct: 251 ILKLVERKAPTRLVQTMVQTRARHILLRNSPQLPQAQAIARLADARQQ 298
>gi|251767814|ref|ZP_02268497.2| putative survival protein SurA [Burkholderia mallei PRL-20]
gi|254360242|ref|ZP_04976512.1| putative survival protein SurA [Burkholderia mallei 2002721280]
gi|148029482|gb|EDK87387.1| putative survival protein SurA [Burkholderia mallei 2002721280]
gi|243061646|gb|EES43832.1| putative survival protein SurA [Burkholderia mallei PRL-20]
Length = 450
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 110/288 (38%), Gaps = 15/288 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 5 KTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 64
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 65 ARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGM 124
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 125 QLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNA 184
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P N Q V ++ + + L + +L K S+ D
Sbjct: 185 GSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKK 244
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
G + + L + + K G E + + ++R
Sbjct: 245 GGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 292
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 289 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 344
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 345 ARTYSQDGSASQGGDLGWISPGEPVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 404
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 405 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 443
>gi|83720338|ref|YP_441133.1| survival protein SurA [Burkholderia thailandensis E264]
gi|257140205|ref|ZP_05588467.1| survival protein SurA, putative [Burkholderia thailandensis E264]
gi|122070640|sp|Q2T116|SURA_BURTA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|83654163|gb|ABC38226.1| survival protein SurA, putative [Burkholderia thailandensis E264]
Length = 448
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 108/283 (38%), Gaps = 20/283 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-----AMSSRIRTTINGEVITDGDISKRIALL--KLQ 66
+ V + + P S ++ +++ + +N +VIT ++ +R+ L+ +LQ
Sbjct: 8 AAVAAGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQ 67
Query: 67 KINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ L + ++++E ++ Q + GI D+ TV + A+ G+ + +
Sbjct: 68 QQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMPLDQY 127
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVRE 177
+ ++ QG+ + F + + + + + + K + E+ A+++ ++
Sbjct: 128 KARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNAGAQQD 187
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-SIGKAQ 235
+ + P N Q ++ + + L + +L K S+ D G
Sbjct: 188 LRLEHIFVKAPTNAPQADIDAAQKKAEGLLQQALASGTNFERLAKSQSEADDAKKGGDLG 247
Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
+ S L + + K G E + + D+R
Sbjct: 248 FKAPSSLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVDRR 290
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
++ A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VDRRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIEAGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|76810003|ref|YP_332285.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1710b]
gi|167718164|ref|ZP_02401400.1| putative survival protein SurA [Burkholderia pseudomallei DM98]
gi|167737195|ref|ZP_02409969.1| putative survival protein SurA [Burkholderia pseudomallei 14]
gi|167822803|ref|ZP_02454274.1| putative survival protein SurA [Burkholderia pseudomallei 9]
gi|167844378|ref|ZP_02469886.1| putative survival protein SurA [Burkholderia pseudomallei B7210]
gi|167901377|ref|ZP_02488582.1| putative survival protein SurA [Burkholderia pseudomallei NCTC
13177]
gi|167909606|ref|ZP_02496697.1| putative survival protein SurA [Burkholderia pseudomallei 112]
gi|167917621|ref|ZP_02504712.1| putative survival protein SurA [Burkholderia pseudomallei BCC215]
gi|226196777|ref|ZP_03792357.1| putative chaperone surA [Burkholderia pseudomallei Pakistan 9]
gi|242314929|ref|ZP_04813945.1| putative chaperone surA [Burkholderia pseudomallei 1106b]
gi|254181756|ref|ZP_04888353.1| putative survival protein SurA [Burkholderia pseudomallei 1655]
gi|254196558|ref|ZP_04902982.1| putative survival protein SurA [Burkholderia pseudomallei S13]
gi|254296203|ref|ZP_04963660.1| putative survival protein SurA [Burkholderia pseudomallei 406e]
gi|122070636|sp|Q3JVW8|SURA_BURP1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|76579456|gb|ABA48931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1710b]
gi|157805631|gb|EDO82801.1| putative survival protein SurA [Burkholderia pseudomallei 406e]
gi|169653301|gb|EDS85994.1| putative survival protein SurA [Burkholderia pseudomallei S13]
gi|184212294|gb|EDU09337.1| putative survival protein SurA [Burkholderia pseudomallei 1655]
gi|225931308|gb|EEH27315.1| putative chaperone surA [Burkholderia pseudomallei Pakistan 9]
gi|242138168|gb|EES24570.1| putative chaperone surA [Burkholderia pseudomallei 1106b]
Length = 448
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 110/288 (38%), Gaps = 15/288 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 3 KTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 62
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 63 ARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGM 122
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 123 QLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNA 182
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P N Q V ++ + + L + +L K S+ D
Sbjct: 183 GSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKK 242
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
G + + L + + K G E + + ++R
Sbjct: 243 GGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 290
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|126441500|ref|YP_001057745.1| putative survival protein SurA [Burkholderia pseudomallei 668]
gi|134279812|ref|ZP_01766524.1| putative survival protein SurA [Burkholderia pseudomallei 305]
gi|217419752|ref|ZP_03451258.1| putative chaperone surA [Burkholderia pseudomallei 576]
gi|226830776|ref|YP_001064989.2| putative survival protein SurA [Burkholderia pseudomallei 1106a]
gi|237810895|ref|YP_002895346.1| chaperone SurA [Burkholderia pseudomallei MSHR346]
gi|254258573|ref|ZP_04949627.1| putative chaperone surA [Burkholderia pseudomallei 1710a]
gi|126220993|gb|ABN84499.1| putative chaperone surA [Burkholderia pseudomallei 668]
gi|134249012|gb|EBA49094.1| putative survival protein SurA [Burkholderia pseudomallei 305]
gi|210148311|gb|ABN91359.2| putative chaperone SurA [Burkholderia pseudomallei 1106a]
gi|217397056|gb|EEC37072.1| putative chaperone surA [Burkholderia pseudomallei 576]
gi|237504702|gb|ACQ97020.1| chaperone SurA [Burkholderia pseudomallei MSHR346]
gi|254217262|gb|EET06646.1| putative chaperone surA [Burkholderia pseudomallei 1710a]
Length = 450
Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 110/288 (38%), Gaps = 15/288 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K + L+ + + + + +++ + +N +VIT ++ +R+ L+
Sbjct: 5 KTLRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLI 64
Query: 64 --KLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+LQ+ L + ++++E ++ Q + GI D+ TV + A+ G+
Sbjct: 65 ARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGM 124
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKN 172
+ + + ++ QG+ + F + + + + + + K + E+ A+++
Sbjct: 125 QLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNA 184
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-S 230
+ ++ + + P N Q V ++ + + L + +L K S+ D
Sbjct: 185 GSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKK 244
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
G + + L + + K G E + + ++R
Sbjct: 245 GGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 292
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 289 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 344
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 345 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 404
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 405 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 443
>gi|239818232|ref|YP_002947142.1| SurA domain protein [Variovorax paradoxus S110]
gi|239804809|gb|ACS21876.1| SurA domain protein [Variovorax paradoxus S110]
Length = 469
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 95/267 (35%), Gaps = 13/267 (4%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQEL 80
P + + I +N E IT+ ++ R+ L + EL ++ ++ L
Sbjct: 50 TAPSTAAPVQRAAEYIVALVNSEPITNTEVQSRVTRLIRENAEAERVPRAELTRLVLERL 109
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E + Q +++GI D ++ AR +S E+ + +GI F+ L
Sbjct: 110 ISERAQLQLAKENGIKVDEVAIDQAEQTVARQNQISVEELRRRVVAEGISQREFRNDLRD 169
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE-----YLIRTVLFSIPDNKLQNQ 195
Q + + + K + E + +N ++ + +L ++P+N + Q
Sbjct: 170 QLLLTRLRDREVESKVKISDAEADEYLRDQRNAPTKDAALQNINLAHLLVAVPENATEAQ 229
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQ 254
++ R R +D KL + S D + G F + +
Sbjct: 230 VATLQQRAQGLAQRARAGEDFAKLVQENSDSPDRANGGAVGMRTADRYPSLFVEATQSTP 289
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGG 280
N P + G + + K LG
Sbjct: 290 VNGIAGPIRSGAGFHVLKVLAKAQLGA 316
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 57/157 (36%), Gaps = 5/157 (3%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRLRLPKDCNKLEK 221
+ + + TV + +R +L ++ + ++ + + R
Sbjct: 309 LAKAQLGATDATVTQTQVRHILLL--NDPKRTTAQAVAQLAEFKRRLQARTADFAGLARD 366
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
+ G + P+F+ + + ++P V++ GV I + +R+
Sbjct: 367 NSQDASAKEGGDLGWSRPGQFVPEFEEAMDRLAPGQISDPVVSRFGVHLIQVVGRRESKL 426
Query: 281 EIALKAY-LSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
A + A ++E+ + +V++ R+ A + Y
Sbjct: 427 TQAEQREAARAVLREQRVEEAFSTWVQETRARAYVEY 463
>gi|167892891|ref|ZP_02480293.1| putative survival protein SurA [Burkholderia pseudomallei 7894]
gi|254187685|ref|ZP_04894197.1| putative survival protein SurA [Burkholderia pseudomallei Pasteur
52237]
gi|157935365|gb|EDO91035.1| putative survival protein SurA [Burkholderia pseudomallei Pasteur
52237]
Length = 448
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 108/277 (38%), Gaps = 15/277 (5%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGE- 71
L+ + + + + +++ + +N +VIT ++ +R+ L+ +LQ+
Sbjct: 14 LVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQQQKAPV 73
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + ++++E ++ Q + GI D+ TV + A+ G+ + + + ++
Sbjct: 74 PPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMQLDQYKARIEA 133
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTV 183
QG+ + F + + + + + + K + E+ A+++ + ++ + +
Sbjct: 134 QGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNAGSQQDLRLEHI 193
Query: 184 LFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD 241
P N Q V ++ + + L + +L K S+ D G + +
Sbjct: 194 FVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKKGGDLGFKSPAS 253
Query: 242 LHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
L + + K G E + + ++R
Sbjct: 254 LPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERR 290
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIESGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|259907387|ref|YP_002647743.1| peptidyl-prolyl cis-trans isomerase SurA [Erwinia pyrifoliae
Ep1/96]
gi|224963009|emb|CAX54492.1| Peptidyl-prolyl cis-trans isomerase, survival protein [Erwinia
pyrifoliae Ep1/96]
gi|283477220|emb|CAY73127.1| survival protein SurA precursor [Erwinia pyrifoliae DSM 12163]
gi|310765112|gb|ADP10062.1| peptidyl-prolyl cis-trans isomerase SurA [Erwinia sp. Ejp617]
Length = 431
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 79/210 (37%), Gaps = 4/210 (1%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L ++ L+++ + Q+ +++G+ ++ A+ +S + S L G+
Sbjct: 65 TLRHQILERLVMDNILLQKAKQAGLQISDAQLDQAIANIAQQNKISVDQLRSRLAYDGMN 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIP 188
+++ + + +V N+ + L E+ A + +N E I +L +P
Sbjct: 125 YASYREQIRKEMATAEVRNNEVRRRVTILPQEVDSLATQLASQNSAGTELNISHILLPLP 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF- 246
+N Q Q Q+ + S + D KL S G + +L F
Sbjct: 185 ENPTQQQVDDQENLAKQLVSEAKGGADFGKLAIANSADPQALKGGNMGWGRIQELPSLFA 244
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
Q L+ + + P + G + + D R
Sbjct: 245 QALVTAKKGDIIGPVRSGVGFHILKVNDMR 274
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/342 (12%), Positives = 95/342 (27%), Gaps = 65/342 (19%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ + I I+ + R+A + + +E+ ++
Sbjct: 87 AGLQISDAQLDQAIANIAQQNKISVDQLRSRLAYDGM--NYASYREQIRKEMATAEVRNN 144
Query: 89 EIEKSGITFDSNTVNYFFVQHARNT-----------------GLSAEDFSSF--LDKQGI 129
E+ + +T V+ Q A + + L KQ +
Sbjct: 145 EVRRR-VTILPQEVDSLATQLASQNSAGTELNISHILLPLPENPTQQQVDDQENLAKQLV 203
Query: 130 G------------------DNHFKQYLAIQSIWPD-----------VVKNDFMLKYGNLE 160
K W +V G +
Sbjct: 204 SEAKGGADFGKLAIANSADPQALKG---GNMGWGRIQELPSLFAQALVTAKKGDIIGPVR 260
Query: 161 M-------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ + ++I+V E R +L P + + QK + A E +
Sbjct: 261 SGVGFHILKVNDMRGDSQSISVTEVHARHILLK-PSPVMTDDQARQKLQQVANEIKSGKL 319
Query: 214 KDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271
+ ++ + + G + P F++ LL+ + +P + G I
Sbjct: 320 TFSDAAKQLSQDPGSANLGGDLGWSSAEVYDPAFRDALLRLKKGQIGDPVHSSFGWHLIQ 379
Query: 272 ICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+ D R + A K + + K + ++++ R+ A
Sbjct: 380 LMDTRKVDKTDAAKKERAYRLLFNRKFAEEAQTWMQEERAAA 421
>gi|167617958|ref|ZP_02386589.1| survival protein SurA, putative [Burkholderia thailandensis Bt4]
Length = 448
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 107/283 (37%), Gaps = 20/283 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-----AMSSRIRTTINGEVITDGDISKRIALL--KLQ 66
+ V + + P S ++ +++ + +N +VIT ++ +R+ L+ +LQ
Sbjct: 8 AAVAAGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQ 67
Query: 67 KINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ L + ++++E ++ Q + GI D+ TV + A+ G+ + +
Sbjct: 68 QQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMPLDQY 127
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVRE 177
+ ++ QG+ + F + + + + + + K + E+ A+++ ++
Sbjct: 128 KARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNAGAQQD 187
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-SIGKAQ 235
+ + P N Q ++ + + L + +L S+ D G
Sbjct: 188 LRLEHIFVKAPTNAPQADIDAAQKKAEGLLQQALASGTNFERLATSQSEADDAKKGGDLG 247
Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNP-YVTQKGVEYIAICDKR 276
+ S L + + K G E + + D+R
Sbjct: 248 FKAPSSLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVDRR 290
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
++ A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VDRRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIEAGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNALQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|218777908|ref|YP_002429226.1| SurA domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759292|gb|ACL01758.1| SurA domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 330
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 119/314 (37%), Gaps = 18/314 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKINGELEK 74
LT F ++ + + S+ + RI +N +VI ++++++A +L G ++
Sbjct: 10 LTALFSTLLTLMTVVPSFAETELVDRIVAIVNTDVIMLSELNEKMAPILAKIDAAGLPDE 69
Query: 75 I-----------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ ++ L +QE EK G+ V+ + + +++ L+ E +
Sbjct: 70 QREKTIYKYREDILNTMVSSLLVEQESEKLGVKVMEGEVDSYLERFKQSSHLTDEALRAQ 129
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIR 181
L+ GI + F+ + ++ + + K + E+ N+ + + Y +R
Sbjct: 130 LEADGISMDLFRNQIHDTILFQKLKTTEVDSKIVITDKEVQDYYNEHIDQYEGKKSYHLR 189
Query: 182 TVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L P+N + Q V+K + + +E +++ S G +
Sbjct: 190 YILLPYPENATEEQKAAVEKTMGEIIAMFKAGESFPALIENVSNEKIGGSGGDLGFFKAG 249
Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKI 297
DL +K + T P G++ + + + ++ + ++
Sbjct: 250 DLTKDLSEKVKIMKPGDITEPMTVDLGLQIFWLEETEMGEGASLEDVRQEIQDLLYNEEV 309
Query: 298 EKHEAEYVKKLRSN 311
+ ++V +L N
Sbjct: 310 KHKYEKWVSELEDN 323
>gi|225023463|ref|ZP_03712655.1| hypothetical protein EIKCOROL_00321 [Eikenella corrodens ATCC
23834]
gi|224943812|gb|EEG25021.1| hypothetical protein EIKCOROL_00321 [Eikenella corrodens ATCC
23834]
Length = 317
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/318 (16%), Positives = 114/318 (35%), Gaps = 22/318 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K+ T L + + S + I + EVIT ++ + +A + Q G
Sbjct: 1 MKMKTLVLALGMSLAFQVASANTVRSVDNIVAVVENEVITQRELDQAVAHTRSQMPRGTQ 60
Query: 71 ----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
EL++ + +L+ ++L Q ++ I V + A + S F + +
Sbjct: 61 VSEQELQRQTLMQLVNQSLLVQAGRRNNIQVPDAEVEAEIARIAASRRQSLAQFEAAQAR 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--------MKNITVREY 178
GI ++ + I V + + E EI A + + +Y
Sbjct: 121 FGIDKTALRRQVRDSMIAQRVQQGQTAGEAKVSEDEINAAIARARAQGITLPQATPKTQY 180
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ +L + + Q + +R+ ++ R +++ + G +L
Sbjct: 181 HAQHILIASQGERAQR---LAQRLA---QNAQRGADFSALARQYSQDGSAANGGDLGWLS 234
Query: 239 ESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPTK 296
E + P+F+ ++ + P TQ G I + + R + ++A + K
Sbjct: 235 EGETVPEFERAMRGLKPGQVSAPVHTQFGWHVIRLVEARTPNTPDARIRAGVHDAIAAQK 294
Query: 297 IEKHEAEYVKKLRSNAII 314
+ +++L N+ I
Sbjct: 295 TQAAMQSLLQQLHQNSFI 312
>gi|170725378|ref|YP_001759404.1| SurA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810725|gb|ACA85309.1| SurA domain [Shewanella woodyi ATCC 51908]
Length = 434
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 111/316 (35%), Gaps = 19/316 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------- 65
+K + A R+ IN ++ + +I+ I +K
Sbjct: 1 MKPCKHLIFAFLALAASHTVQAQTAPLDRVSVQINEGILLESEITGMIKTVKANATAAGQ 60
Query: 66 -QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ L ++ LI+ L+ Q ++ G+ ++ A+ L+ + +
Sbjct: 61 ALPSDSALRTQVIERLIMTRLQMQMADRIGLHIGDLQLDQTIGNIAKEQNLTVDQMQLKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRT 182
++G+ N +++ L + ++ + + EI + + K + E+ I
Sbjct: 121 AEEGMSWNQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKMIEEKGLQEVEFQIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+L +P + Q + + R++ D + +S + G Y+ ++
Sbjct: 181 ILIEVPSSPNSEQLASASKRAETVLKRVKDGADFRRTAIAASSGPKALEGGVWDYMNVNE 240
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKI 297
+ F +L + P + G I + D R L + ++ + +P
Sbjct: 241 MPTLFAEVLGNAKPGDVIGPIRSGAGFHIIKVLDARGLQTKEIDEVRSRHILIKPSPILS 300
Query: 298 EKHEA----EYVKKLR 309
E+ ++VK++R
Sbjct: 301 EERAKAMLDKFVKEIR 316
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 54/157 (34%), Gaps = 6/157 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + ++ + E R +L I + + ++ + + + D L + S
Sbjct: 273 LDARGLQTKEIDEVRSRHIL--IKPSPILSEERAKAMLDKFVKEIRTGDADFAALARQYS 330
Query: 225 KI--HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G+ + S P F L + N + P+ + G + + ++R
Sbjct: 331 EDPGSGAKGGELGWADPSVYVPAFAQTLNALELNEISEPFRSSHGWHIVQLEERRKTDAT 390
Query: 282 IALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++RS A I +
Sbjct: 391 DKFNTNRAHQLIFRRKFNEELQNWLDEMRSEAYIEVF 427
>gi|329296585|ref|ZP_08253921.1| peptidyl-prolyl cis-trans isomerase SurA [Plautia stali symbiont]
Length = 431
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 97/269 (36%), Gaps = 12/269 (4%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------E 71
+++ I ++ + M ++ +N V+ + D+ + +K Q
Sbjct: 6 MLILGVAITANTAFAAPQMVDKVAAVVNNGVVLESDVDNMLRTVKSQAQQAGQQLPDDKT 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++ +++ + Q EK+G+ ++ A +S + S L G+
Sbjct: 66 LRHQFLERQVMDAIILQMGEKAGLQVSDQQLDQAIQSIAAQNRMSVDQLRSRLAYDGMNY 125
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
N ++ + + + +V N+ + L E+ A + +N E I +L +P+
Sbjct: 126 NDYRAQIRKEMLISEVRNNEVRRRVTILPQEVDTLAKQIGSQNTQGTELNISQILLPLPE 185
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF-Q 247
N Q Q Q+ + L+ D KL S G + +L F Q
Sbjct: 186 NPTQQQVDDQEALARQLVGELKGGADFGKLAVTYSADPQALKGGNMGWGKIEELPTLFSQ 245
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L + + P + G + + D R
Sbjct: 246 TLSSAKKGDIVGPIRSGVGFHILKVNDLR 274
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 6/150 (4%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + KNI+V E L R +L + + +++I+ S
Sbjct: 274 RGESKNISVTEVLARHILLK--PSPILTDDQARQKIEQITADIKSGKTTFAAAATQLSDD 331
Query: 227 HDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G + P F++ LLK + + P + G I + D R + A
Sbjct: 332 PGSANQGGDLDWASPEIDDPAFRDALLKLQKGQVSAPVHSSFGWHLIQLLDTRQVDKTDA 391
Query: 284 LKAYLSAQ-NTPTKIEKHEAEYVKKLRSNA 312
+ + + K + ++++ R++A
Sbjct: 392 AQKERAYRLLFNRKFAEEAQTWMQEQRASA 421
>gi|332534336|ref|ZP_08410179.1| survival protein SurA precursor [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036246|gb|EGI72719.1| survival protein SurA precursor [Pseudoalteromonas haloplanktis
ANT/505]
Length = 431
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 100/275 (36%), Gaps = 15/275 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------ 67
KLLT+ + C + + ++ +N VI ++ I +K Q
Sbjct: 5 KLLTSAVLSASLCQSVMAA---PVEIDKVIGVVNQGVILKSEVDTIIDRVKKQAQEQGQQ 61
Query: 68 --INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ L AV+ L+ + L Q E+ G+ + ++ A+ G + D ++
Sbjct: 62 LPKDETLRVQAVERLVNQALMMQMAERMGLQISDSQLDQTLANMAKEQGGTIADLRRTIE 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM--KNITVREYLIRTV 183
G +++ + + V + + E E+ + M + + EY I +
Sbjct: 122 GSGESFQAYREEIRKEITTQQVTRASVDRRIYISEQEVDNLLKIMETQGQSAEEYDIGHI 181
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDL 242
L IP++ ++ K D L ++ + +S + G+ Y+ +++
Sbjct: 182 LIDIPNDATADEIADAKTRADKVIELLNDGQEFKRIAISSSSGSKALEGGQLGYMGINEM 241
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F +K + + P + G I + D R
Sbjct: 242 PSLFAEAVKGQKKGAIVGPLRSGAGFHIIKVQDVR 276
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 6/157 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + ++ + E R +L P L + A++ R D +L K S
Sbjct: 273 QDVRGLQVVETTEVRSRHILIK-PSIILSEEKARSMLAGFAKDLRA-GTADFGELAKEYS 330
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-G 280
+ + G+ + + P F++ LL +N + P+ TQ G + + KR
Sbjct: 331 EDPGSALKGGEYDWTDPTTYVPAFKDTLLSLKENEISEPFRTQFGWHIVQLLGKRVADKT 390
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
E+A + K ++ + +++R A + +
Sbjct: 391 ELAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427
>gi|167835488|ref|ZP_02462371.1| survival protein SurA, putative [Burkholderia thailandensis MSMB43]
Length = 448
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 113/283 (39%), Gaps = 20/283 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-----AMSSRIRTTINGEVITDGDISKRIALL--KLQ 66
+ + V + + P S ++ +++ + +N +VIT ++ +R+ L+ +LQ
Sbjct: 8 AAVASGLVASLITVAPPASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQ 67
Query: 67 KINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ L + ++++E ++ Q + GI D+ TV + A+ G+ + +
Sbjct: 68 QQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMPLDQY 127
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVRE 177
+ ++ QG+ + F + + + + + + K + E+ A+++ + ++
Sbjct: 128 KARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNAGSQQD 187
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDV-SIGKAQ 235
+ + P N Q ++ D + L + +L K S+ D G
Sbjct: 188 LRLEHIFVKAPTNAPQADIDAAQKKADGLLQQALASGANFERLAKSQSEADDAKKGGDLG 247
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNP--YVTQKGVEYIAICDKR 276
+ S L + + K + NP G E + + ++R
Sbjct: 248 FKSPSSLPSDVVDAVSKLRPGEVNPALIRVPDGFEIVRLVERR 290
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKL 219
+E A++ + + + +R +L + + K ++Q R + + R + D K
Sbjct: 287 VERRASQNPAASPKIVQTHVRHILLRVGEGKSESQA----RQQLIDIRRQIEAGGDFEKF 342
Query: 220 EKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ S+ S G ++ + P+F+ + Q +NP T+ G I + +RD
Sbjct: 343 ARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRD 402
Query: 278 LGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
G + + ++ Q K E+ ++++++LR ++ +
Sbjct: 403 AEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQ 441
>gi|254283287|ref|ZP_04958255.1| chaperone SurA [gamma proteobacterium NOR51-B]
gi|219679490|gb|EED35839.1| chaperone SurA [gamma proteobacterium NOR51-B]
Length = 435
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/326 (15%), Positives = 112/326 (34%), Gaps = 18/326 (5%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDIS 57
MT+ T LS L+TT +F ++ +I ++ ++I ++
Sbjct: 1 MTATNITFLSR--ALITTVLTSGMFLNAITAHAQAGDQVQILEQIVAIVDDDIILASELR 58
Query: 58 KRIALLKLQ-KINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
+R+ LK+ + G L + + LI+E+++ Q E+ GI ++ +
Sbjct: 59 ERLDTLKVNIERQGAEMPAEDILVRETLDRLILESIQLQMGERYGIRIPDTQLDEALRRV 118
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NK 167
A N GL+ F L+ +G ++ + + V + + + EI
Sbjct: 119 ASNNGLTLAQFRGALEAEGRSYAEMRESVRKEMTIQRVQQGNVSRNINISDAEIDNYLET 178
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ + +T +Y + L + + + ++ D+ S + +
Sbjct: 179 EAGQELTEPQYRVFQALIPVNSTDSEAERASKEAFVDSALSAILDGQAFESAVSVTQPY- 237
Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALK 285
G + SD+ F ++ T + G + + D R+
Sbjct: 238 AFQGGDLGWRKLSDIPSMFTAIVPTLDRGETGKVESGSGFHLVHVADVRGRERVIAQTKV 297
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSN 311
++ + + + E + LR
Sbjct: 298 RHILVKPSEVRTEAETEQLAADLRQR 323
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/306 (12%), Positives = 103/306 (33%), Gaps = 57/306 (18%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R AL + E+ + +E+ ++ +++ + + I ++ + A L+
Sbjct: 130 RGALEAEGRSYAEMRESVRKEMTIQRVQQGNVSR-NINISDAEIDNYLETEAGQ-ELTEP 187
Query: 119 D-----------------------------FSSFLDKQG----IGDNHFKQYLAIQSIWP 145
S+ LD Q + + W
Sbjct: 188 QYRVFQALIPVNSTDSEAERASKEAFVDSALSAILDGQAFESAVSVTQPYAFQGGDLGWR 247
Query: 146 DV----------VKNDFMLKYGNLEME-----IPANKQKMKNITVREYLIRTVLFSIPDN 190
+ V + G +E + + + + + +R +L + +
Sbjct: 248 KLSDIPSMFTAIVPTLDRGETGKVESGSGFHLVHVADVRGRERVIAQTKVRHIL--VKPS 305
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN 248
+++ + ++ D + RL D +L K S+ + G + + P+F+
Sbjct: 306 EVRTEAETEQLAADLRQ-RLLDGADFAELAKEYSEDIGSAQEGGDLGWTSAGQMVPEFEQ 364
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ +++ ++ P +Q G + + +RD + + ++ K ++ +++
Sbjct: 365 AMAETEVDDIAPPVRSQFGWHVLEVTGRRDKDVSDEMRRNQVANYLHDAKYQEELDAWLR 424
Query: 307 KLRSNA 312
K+R+ A
Sbjct: 425 KIRTEA 430
>gi|292492134|ref|YP_003527573.1| SurA domain protein [Nitrosococcus halophilus Nc4]
gi|291580729|gb|ADE15186.1| SurA domain protein [Nitrosococcus halophilus Nc4]
Length = 425
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 119/312 (38%), Gaps = 16/312 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGE--- 71
+ V ++ + S+ + + RI +N EV+ + ++ + + ++ Q G
Sbjct: 1 MRRLLVAVLAVFWSMGSFGA-TILDRIVAVVNEEVVLESELEQMVHTVQEQLVAKGTPLP 59
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
LE+ ++ L+++ L+ Q ++GI T+N + A + GL+ F L++
Sbjct: 60 PDYMLEQQVLERLVMQQLQLQLAARTGIRVGDETLNQALRRIAEDNGLTLSQFRDVLEQD 119
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLF 185
G F++ + + I + K + + E EI Q+ + +Y + VL
Sbjct: 120 GYNFPSFRENIRRELIISQLHKREVNDRVTVSEAEIDNFLTTQRKRGNQDVQYQLGHVLI 179
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHP 244
++P+ Q + + +LR D K ++ + G + L
Sbjct: 180 AVPEAASPEQLQAARAKGEQLLRQLREGMDFQKAALAYSDGQQALEGGNLGWRKMGQLPT 239
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
F +++ K Q + + G + + D+R ++ + + T +
Sbjct: 240 LFVDVVPKLQVGEISELIRSPSGFHIVKLLDRRGEEQQVVTQTHARHILLRTDELTSNRD 299
Query: 304 ---YVKKLRSNA 312
+ +LR A
Sbjct: 300 ARLRLGQLRQRA 311
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 88/298 (29%), Gaps = 57/298 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL----------------- 115
+ +ELI+ L K+E+ +T ++ F +
Sbjct: 127 RENIRRELIISQLHKREVNDR-VTVSEAEIDNFLTTQRKRGNQDVQYQLGHVLIAVPEAA 185
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQ-----------------SIWPD-------VVKND 151
S E + K ++ + Q W V
Sbjct: 186 SPEQLQAARAKGEQLLRQLREGMDFQKAALAYSDGQQALEGGNLGWRKMGQLPTLFVDVV 245
Query: 152 FMLKYGNLEMEIP----------ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
L+ G + I +++ + V + R +L + + R
Sbjct: 246 PKLQVGEISELIRSPSGFHIVKLLDRRGEEQQVVTQTHARHILLRTDELTSNRDA--RLR 303
Query: 202 IKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTN 259
+ + L+ + + K + G ++ + P+F+ +++ +
Sbjct: 304 LGQLRQRALQGDDFSELAQAHSDDKASALKGGDLGWISPGQMIPRFEEVMRSLDPGEISK 363
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
P+ TQ G + I ++R + KIE+ ++++LR A + Y
Sbjct: 364 PFQTQFGWHVVQILNRRQQNMTEEFNRNRARMEIRQRKIEEELENWLRQLRDEAYVEY 421
>gi|145640429|ref|ZP_01796013.1| thymidylate kinase [Haemophilus influenzae R3021]
gi|145275015|gb|EDK14877.1| thymidylate kinase [Haemophilus influenzae 22.4-21]
Length = 137
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L ++ + + C V++ S A + R+ T++G + + + + G+
Sbjct: 5 ILKSFLLATLGC----VAFTSMAQAEERVVATVDGIPVLESQVRANMG------KKGD-R 53
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ ++I + L ++ +++SG+ D +++ A GL+ F LD QGI N
Sbjct: 54 QSAIDKIIDDILVQKAVQESGVKIDPREIDHIVEDTAARNGLTYGQFLDALDYQGISLNA 113
Query: 134 FKQYLAIQSIWPDVVKNDF 152
F+Q +A Q + V F
Sbjct: 114 FRQQIANQMVMGLYVTKLF 132
>gi|262164102|ref|ZP_06031841.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus VM223]
gi|262027630|gb|EEY46296.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio mimicus VM223]
Length = 388
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 89/209 (42%), Gaps = 7/209 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + +++LI++TL++QE E+ G+ D N +N + A++ + E S + ++G+
Sbjct: 25 LREQVLEKLIIDTLQQQEAERIGVKIDDNRLNDAIKEIAKSNQQTQEQLISSVAQEGLTY 84
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
F++ + + D + L E+ A + +Y I + + +
Sbjct: 85 PEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVEE 144
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ +++ + + L+ D ++ ++ + G ++ + ++ F +
Sbjct: 145 GQDKSEAES---LANKLVGELKHGADFAQMAYTYSKGPKALQGGDWGWMRKEEMPTIFAD 201
Query: 249 LLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+K +++ + P+ + G + I D +
Sbjct: 202 QIKMQNKGSVIGPFRSGVGFHILKIDDVK 230
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q V F G ++I K ++ + V E R +L I
Sbjct: 196 PTIFADQIKMQ--NKGSVIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 250
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 251 IILSDEGAQKQLNEFVQRIKNGEATFGELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 310
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 311 QIETLPVGQISEPFQTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 370
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 371 ELRASAFVE 379
>gi|262189698|ref|ZP_06048066.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae CT
5369-93]
gi|262034418|gb|EEY52790.1| peptidyl-prolyl cis-trans isomerase SurA [Vibrio cholerae CT
5369-93]
Length = 365
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 89/209 (42%), Gaps = 7/209 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + + ++G+
Sbjct: 2 LREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTY 61
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPD 189
F++ + + D + L E+ A + +Y I + + D
Sbjct: 62 PEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDD 121
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ ++ + + + LR D ++ ++ + G ++ + ++ F +
Sbjct: 122 GQDKSAAET---LANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFAD 178
Query: 249 LLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+K +++ + P+ + G + I D +
Sbjct: 179 QIKMQNKGSIIGPFRSGVGFHILKIDDVK 207
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 73/189 (38%), Gaps = 9/189 (4%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + +Q + F G ++I K ++ + V E R +L I
Sbjct: 173 PTIFADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPT 227
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQN 248
+ + QK++ + + +L + S+ + G+ Y P+F++
Sbjct: 228 IILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKH 287
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ T G + + D+R++ + ALK K + + +++
Sbjct: 288 QIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQ 347
Query: 307 KLRSNAIIH 315
+LR++A +
Sbjct: 348 ELRASAFVE 356
>gi|88859123|ref|ZP_01133764.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas
tunicata D2]
gi|88819349|gb|EAR29163.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Pseudoalteromonas
tunicata D2]
Length = 430
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 98/276 (35%), Gaps = 12/276 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQKIN 69
+KL T F ++ + + + ++ T+N V+ +I R+ L
Sbjct: 1 MKLKTLVFTVLCTLGLNLPAVAKEVQIDKVVATVNEGVVLQSEIDTIINRVKSRALTDGQ 60
Query: 70 G-----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L A++ LI + L Q E+ G+ ++ + A+ G + D +
Sbjct: 61 SLPTDDALRLQAIERLINQELLMQMSERMGLQISDAQLDQTLMMMAKEQGGTLADLRKTI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM--KNITVREYLIRT 182
+ G +++ + ++ V++++ + EI + + T EY I
Sbjct: 121 ESSGESYQAYREEMRVEMTTQQVLRSNVERRIYISLQEIENLLTILEQQGQTNEEYDIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESD 241
+L +P + + K + L + ++ +S G+ ++ ++
Sbjct: 181 ILIDLPADGNAQEIEDAKVRAEKVIKLLNEGSEFKRIAIASSGGSKALEGGQLGWMSINE 240
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
+ F +K K P + G I + D R
Sbjct: 241 MPTLFAEAVKGKKAGEIVGPLRSGAGFHIIKVQDIR 276
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 6/152 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ + + E R +L I + + ++ + + + D L K S+
Sbjct: 276 RGRQVVETVEVRSRHIL--IQPSIILSEEKARSMLAGFVKDLKEGKADFATLAKEYSEDQ 333
Query: 228 DVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
+ G+ + S P F++ LL ++ + P+ + G + + DKR
Sbjct: 334 GSALKGGEYDWTDPSTYVPAFRDTLLSLEKDQLSEPFRSNYGWHIVQLLDKRIADKTELA 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIH 315
K + Q K ++ + +++R A I
Sbjct: 394 KRNRAQQMLFNRKFKEESFAWQREMREQAHIE 425
>gi|288940552|ref|YP_003442792.1| SurA domain-containing protein [Allochromatium vinosum DSM 180]
gi|288895924|gb|ADC61760.1| SurA domain protein [Allochromatium vinosum DSM 180]
Length = 446
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 91/250 (36%), Gaps = 7/250 (2%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+L K + LI++ L++Q ++ G+ D T+ A GLS ++ + L+ G
Sbjct: 80 PEQLRKQVLDRLILKHLQQQRAKELGLKVDEATLEEALQGIAGRNGLSLDELKATLEAGG 139
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFS 186
I F++ Q + + + + K E E+ ++ + I + ++ +L +
Sbjct: 140 IRFEDFREDTRSQILSSRLQNQEVVRKIQVSEPEVDRFLAREASRLIEREQVRLQHILIA 199
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQ 245
+P+N Q + RLR D + + + + G + +
Sbjct: 200 LPENPTPEQVKRAEDKAKGLVERLRSGADFAAVAVRESDGRNALEGGDLGWFEMGAVPSL 259
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE---IALKAYLSAQNTPTKIEKHE 301
+L ++ + P + G I + + + E ++ + +
Sbjct: 260 VSDLAYTLAEGEVSEPLRSPSGFHIIRMREIKAAAPEDVTQTRARHILIRTNEIVSDADA 319
Query: 302 AEYVKKLRSN 311
+ + +LR
Sbjct: 320 RQRLLQLRER 329
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 93/300 (31%), Gaps = 59/300 (19%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-----------------T 113
+ + +++ L+ QE+ + I V+ F + A
Sbjct: 144 DFREDTRSQILSSRLQNQEVVR-KIQVSEPEVDRFLAREASRLIEREQVRLQHILIALPE 202
Query: 114 GLSAEDFSSFLDKQGIGDNHFK---QYLAI--------------QSIW------PDVVKN 150
+ E DK + + A+ W P +V +
Sbjct: 203 NPTPEQVKRAEDKAKGLVERLRSGADFAAVAVRESDGRNALEGGDLGWFEMGAVPSLVSD 262
Query: 151 -DFMLKYGNLEMEIP----------ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ L G + + + V + R +L N++ + +
Sbjct: 263 LAYTLAEGEVSEPLRSPSGFHIIRMREIKAAAPEDVTQTRARHILIRT--NEIVSDADAR 320
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NN 256
+R+ E R+ +D L + S + G+ ++ P+F+ +
Sbjct: 321 QRLLQLRE-RIIGGEDFAGLARAHSDDTGSALKGGELGWVDPGKTVPEFEEQMNALAVGA 379
Query: 257 TTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T+ P+ + G + + ++R E L+ K E+ E++++LR A +
Sbjct: 380 TSEPFKSPFGWHILQVEERRQQSANEDILRLKAREALQRRKAEEATEEWLRQLRDEAYVE 439
>gi|332524713|ref|ZP_08400912.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrivivax
benzoatilyticus JA2]
gi|332108021|gb|EGJ09245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrivivax
benzoatilyticus JA2]
Length = 436
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 90/257 (35%), Gaps = 12/257 (4%)
Query: 42 IRTTINGEVITDGDISKRI-ALLKLQKINGE------LEKIAVQELIVETLKKQEIEKSG 94
I +N E +T ++ R+ +L+ +G + K + +LI E SG
Sbjct: 36 IVAIVNQEAVTAAEVESRVQRVLQAAARSGAQPSLEVVRKRVLDDLIEERAIVTYARDSG 95
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I + V+ A L+A+ L G+ F+ L Q + V + +
Sbjct: 96 IRVEDPEVDRAIQSVAAQNQLTADQLRERLRADGLDYARFRANLRDQILIERVREREVYQ 155
Query: 155 KYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + E+ +Q + E I +L +P+ + +K + +R+R
Sbjct: 156 RIRVTDGEVDRYLAQQNIATQADVELNIAQILVIVPEGGDEQVLAARKARAEQALARVRG 215
Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK--GVEY 269
+D + + S+ + G + L F ++ P + + G
Sbjct: 216 GEDFAAVAREISEDANQERGGVIGLRPSARLPDLFVEAVRDVPAGEVKPELVRSGAGFHV 275
Query: 270 IAICDKRDLGGEIALKA 286
+ + ++++ +
Sbjct: 276 LKVVERKETMAVRVTQT 292
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 55/148 (37%), Gaps = 5/148 (3%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-S 230
+ V + R +L + ++ + +R+ + + + + + S+ S
Sbjct: 286 AVRVTQTHARHIL--VRTSERVSPEMAAQRLAEFRRQIVSGQRRFEDVARQYSEDGSAPS 343
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYL 288
G + + P+F+ + + + P ++ GV I + ++RD E ++
Sbjct: 344 GGDLGWFAPGTMVPEFEEAMNRLPIEGVSPPVRSRFGVHLIQVLERRDTAVEARQVREQA 403
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K + E+ K LR + I +
Sbjct: 404 RNVLRERKFDDAYTEWAKDLRDRSYIEF 431
>gi|88704591|ref|ZP_01102304.1| Chaperone surA [Congregibacter litoralis KT71]
gi|88700912|gb|EAQ98018.1| Chaperone surA [Congregibacter litoralis KT71]
Length = 400
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 101/263 (38%), Gaps = 7/263 (2%)
Query: 56 ISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+++ IA + + L + + LI+E ++ Q ++ G+ +N + A G
Sbjct: 26 VNQNIAAQGAEAPPEDVLIRETLDRLILENIQIQMGQRFGVRISDAQLNQAMGRIAAQNG 85
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKN 172
L+ E F+ L+++G ++ + + I V + + + EI + ++ +
Sbjct: 86 LTQEQFAVLLEQEGRSYMEIRENIEREMIIQRVQQGNVNQLIEISDQEIENYLSTEEGQK 145
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ EY I L I + + + + R+R + + + + + G
Sbjct: 146 LVQPEYRIIHALLPISSDTSDAEIEKNRTFSEGLVERIRDGESFEAVMTSVPQEYAFTGG 205
Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYL 288
+ +DL FQ + S+ T + + + G+ + + D+R D+ ++
Sbjct: 206 DLGWRKLADLPSLFQEVAPTLSRGETADVFQSPSGLHIVTMADQRGGGDMTINQTKVRHI 265
Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311
+ + + + +LR
Sbjct: 266 LIEPSEILTDDQARDLAAELRER 288
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A+++ ++T+ + +R +L I +++ + + E R+ +D L + S
Sbjct: 247 ADQRGGGDMTINQTKVRHIL--IEPSEILTDDQARDLAAELRE-RVEAGEDFGDLAREYS 303
Query: 225 KI--HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--DLG 279
+ G + + P+F+N++ ++ + P +Q G + + ++R D+
Sbjct: 304 EDIGSAAEGGDLGWTSPGQMVPEFENMMASTEVGVVSPPVRSQFGWHILEVLERREKDIT 363
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
++ KA + K ++ +++K+R A
Sbjct: 364 EDM-RKAQVREFLHGRKYQEELDAWLRKIRDEA 395
>gi|119504985|ref|ZP_01627062.1| Parvulin-like peptidyl-prolyl isomerase [marine gamma
proteobacterium HTCC2080]
gi|119459271|gb|EAW40369.1| Parvulin-like peptidyl-prolyl isomerase [marine gamma
proteobacterium HTCC2080]
Length = 436
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 38/323 (11%), Positives = 108/323 (33%), Gaps = 13/323 (4%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62
SK + ++ L + ++ + ++ ++ ++I ++ +R+ L
Sbjct: 5 SKAMLMSTLYLPRLAATLATLACIVLAPWANAQIQTLDKVVAIVDDDIILATELQERLLL 64
Query: 63 LKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
++ + L + + LI+E+++ Q + G+ ++ + A +
Sbjct: 65 IQRNIEQRQIDAPPDEVLARETLDRLILESIQLQLANRYGVRIPDAQLDAAMARMASGSN 124
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ E F + ++ G ++ + + + V + + E E+
Sbjct: 125 YTLEQFRAAVEANGQSYLAMREEIRREMMIQRVQQGNVSRNIEISEQEVDNFLSTEAGAE 184
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ + R + + +K ++ QK+ D + + KD + G
Sbjct: 185 MTQPEFRVIQALVEVSKKDSKADRQKKEDFVDGILASILAGKDFPEAVSVIEPYV-FKGG 243
Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSA 290
+ + F ++ + T + G + + D+ R+ E ++
Sbjct: 244 DLGWKKLDAIPSMFAAVIPSLKVGDTAKVASGAGFHLVYLADERGRERLVEQTEVRHILI 303
Query: 291 QNTPTKIEKHEAEYVKKLRSNAI 313
+ T E +LR A+
Sbjct: 304 KPTEVLDEDAAIALATELRQRAM 326
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 95/317 (29%), Gaps = 64/317 (20%)
Query: 52 TDGDISK-RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
++ + + R A+ + + + +E++++ +++ + + I V+ F A
Sbjct: 123 SNYTLEQFRAAVEANGQSYLAMREEIRREMMIQRVQQGNVSR-NIEISEQEVDNFLSTEA 181
Query: 111 RNTGLSAEDF-----------------------------SSFLDKQG-------IGDNHF 134
++ +F +S L + I F
Sbjct: 182 G-AEMTQPEFRVIQALVEVSKKDSKADRQKKEDFVDGILASILAGKDFPEAVSVIEPYVF 240
Query: 135 KQYLAIQSIWPDV-----VKNDFMLKYGNLEMEIPANKQK----------MKNITVREYL 179
K W + + + + A+ + V +
Sbjct: 241 KG---GDLGWKKLDAIPSMFAAVIPSLKVGDTAKVASGAGFHLVYLADERGRERLVEQTE 297
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+R +L + ++ + R +D L K S + G+ +
Sbjct: 298 VRHILIKPTEVLDEDAAIA---LATELRQRAMDGEDFGALAKEYSDDIGSAQEGGELGWT 354
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPT 295
+ P+F + ++ + P +Q G + + +R+ E + +
Sbjct: 355 SPGQMVPEFDATMATTEVGEISYPVKSQFGWHILEVTGRREENIAEQMRRQQVMGYLHDQ 414
Query: 296 KIEKHEAEYVKKLRSNA 312
K ++ +++K+R A
Sbjct: 415 KYDEELEAWLRKIREEA 431
>gi|325295072|ref|YP_004281586.1| SurA domain [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065520|gb|ADY73527.1| SurA domain [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 283
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/299 (17%), Positives = 108/299 (36%), Gaps = 22/299 (7%)
Query: 21 VLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
+L+ F ++ +++ S+A + I +NGE I ++ ++ K A
Sbjct: 4 LLVFFLVMVLLTLPSYAKIVDYIVAVVNGEPILYSELLDYAKTNRI-----NNLKAARDS 58
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYL 138
LI + E + G+ +N +N+G S E+F L K+G+ K+ L
Sbjct: 59 LIERKILLTEAKSEGLAVSDEELNRALENFIKNSGFKSKEEFEKALKKEGLTLEEVKEKL 118
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q + ++ + K ++E+ ++ K VRE V
Sbjct: 119 KEQLLVAKLIGRNVKSKIRVSDIEVEKVCKEKKKKPVREVYYIYV----------KDKQK 168
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
RI + +S + K + + + + G + + L + ++ T
Sbjct: 169 ANRIMEILDSGIPFEKVAKEYSEDKATAQN--GGYLGKVTKGSLIKPLDIAVWSTKPKTY 226
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
T+ G I + + E K + + K +K +Y+ L+S A + Y
Sbjct: 227 KLVETKGGYYIIYV---KKEEIEKCDKNRIREELYVKKFQKALKDYIDSLKSKASVKVY 282
>gi|311233707|gb|ADP86561.1| SurA domain protein [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 112/293 (38%), Gaps = 30/293 (10%)
Query: 41 RIRTTINGEVITDGDISK-------RIALLKLQKINGEL----EKIAVQELIVETLKKQE 89
RI +NGE+IT D+ R L ++ + E + + +I + L QE
Sbjct: 86 RIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSMISDILISQE 145
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
E+ IT + V+ + + + + L+ E F L +QG+ + ++ + + ++
Sbjct: 146 AERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRRGILRHRLLG 205
Query: 150 NDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
K EI K + ++ R+ + V+F D+ V+ +
Sbjct: 206 LMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLVIFPPRDDADALAAQVKSGAMTFAD 265
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
R N + IG + SDL ++++ L + + + ++ +
Sbjct: 266 LAARHSIGPNPQ-------NGGVIGDLLW---SDLSMEWRDTLSELKPGDVSRVFLVEGR 315
Query: 267 VEYIAIC----DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++A + + K+++ EY+ +LRS A+I
Sbjct: 316 KAVLQLVASNEGKGQALDDVAEE--IENILREPKMQERLQEYIGQLRSRAVID 366
>gi|218885391|ref|YP_002434712.1| SurA domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756345|gb|ACL07244.1| SurA domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 320
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/329 (16%), Positives = 116/329 (35%), Gaps = 31/329 (9%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRI--AL 62
SL +L ++ + C+ + A ++I +NGE+IT D+ + L
Sbjct: 1 MRSLLRTFRLAAPVLLVSLACLATVAVVAPRAEQINKIAAVVNGEMITFFDVQAQATPEL 60
Query: 63 LKL---------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
++L Q+ ++ + LI + L QE E+ IT V + + +
Sbjct: 61 MRLGLDRNNPAHQEAVRKVHLQVLDSLISDILMNQEAERWKITVQDGEVENELRKFVQRS 120
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
LS ++F L +QG+ + + + + ++ K + ++ K+
Sbjct: 121 QLSQQEFERQLTQQGLSMDVMRDRVRKGILRHRLLTLMIARKIVITQEDVKKYYDAHKSQ 180
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS----KIHDV 229
V + +R L +AE ++ E+ A+ +
Sbjct: 181 FVTDRTVRLGLVIFAP------------TANAEALADKVRTGQTTFEQLAASESIGPNPG 228
Query: 230 SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
S G L +DL P ++ L T+ + + + + + +A
Sbjct: 229 SGGDIGTLKWTDLAPAWKEALDGLKAGETSPVILVEGRKAMLKLVAVTTGRSQTVEEATP 288
Query: 289 SAQ--NTPTKIEKHEAEYVKKLRSNAIIH 315
+ K+++ EY K+L A+I
Sbjct: 289 EIENILREPKLQERFTEYTKQLHDKAVID 317
>gi|46580310|ref|YP_011118.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|46449727|gb|AAS96377.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
vulgaris str. Hildenborough]
Length = 348
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 112/293 (38%), Gaps = 30/293 (10%)
Query: 41 RIRTTINGEVITDGDISK-------RIALLKLQKINGEL----EKIAVQELIVETLKKQE 89
RI +NGE+IT D+ R L ++ + E + + +I + L QE
Sbjct: 65 RIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSMISDILISQE 124
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
E+ IT + V+ + + + + L+ E F L +QG+ + ++ + + ++
Sbjct: 125 AERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRRGILRHRLLG 184
Query: 150 NDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
K EI K + ++ R+ + V+F D+ V+ +
Sbjct: 185 LMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLVIFPPRDDADALAAQVKSGAMTFAD 244
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
R N + IG + SDL ++++ L + + + ++ +
Sbjct: 245 LAARHSIGPNPQ-------NGGVIGDLLW---SDLSMEWRDTLSELKPGDVSRVFLVEGR 294
Query: 267 VEYIAIC----DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++A + + K+++ EY+ +LRS A+I
Sbjct: 295 KAVLQLVASNEGKGQALDDVAEE--IENILREPKMQERLQEYIGQLRSRAVID 345
>gi|119470578|ref|ZP_01613281.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Alteromonadales
bacterium TW-7]
gi|119446279|gb|EAW27556.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Alteromonadales
bacterium TW-7]
Length = 431
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 102/275 (37%), Gaps = 15/275 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------ 67
KLL + + I C ++ ++ +N VI +++ + +K Q
Sbjct: 5 KLLVSTVLSISLCQN---AFAEPVEIDKVVGIVNQGVILQSEVNSIVDRVKKQAQEQGQQ 61
Query: 68 --INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ L A++ L+ + L Q E+ G+ + ++ A+ G + D ++
Sbjct: 62 LPKDETLRVQAMERLVSQALMMQMAERMGLQISDSQLDQTLANIAKEQGGTISDLRRTVE 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM--KNITVREYLIRTV 183
G +++ + + V + + + E E+ + M + + EY I +
Sbjct: 122 ASGDSFQAYREEIRKEITTQQVTRANVDRRIYISEQEVDNLLKIMASQGQSAEEYDIGHI 181
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDL 242
L IP+ ++ K D L ++ + +S + G+ ++ +++
Sbjct: 182 LIDIPNEATADEISAAKTRADKVIELLNDGQEFKRIAISSSSGSKALEGGQLGWMGINEM 241
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR 276
F +K K ++ P + G I + D R
Sbjct: 242 PSLFAEAVKSKKKDAIVGPLRSGAGFHIIKVQDVR 276
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + ++ + E R +L P L + A++ R D +L K S
Sbjct: 273 QDVRGLQVVETTEVRSRHILIE-PSIILSEEKARNMLAGFAKDLRA-GNADFGELAKEYS 330
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-G 280
+ + G+ + + P F++ LL Q+ + P+ TQ G + + DKR
Sbjct: 331 EDPGSALKGGEYDWTDPTTYVPAFRDTLLSLKQDEISEPFRTQFGWHIVQLLDKRVADKT 390
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
E+A + K ++ + +++R A + +
Sbjct: 391 ELAKRNRAHGMLFNRKFKEESFNWQQEMREQAHVEIF 427
>gi|206890347|ref|YP_002248393.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742285|gb|ACI21342.1| PpiC-type peptidyl-prolyl cis-trans isomerase, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 341
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/317 (17%), Positives = 117/317 (36%), Gaps = 23/317 (7%)
Query: 18 TYFVLIIFCIVPIVSYKSWA-----MSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+F++I+F ++ +K A ++ +N +VIT ++ K + +I
Sbjct: 26 VFFLMIVFFCTQLLIFKLNAEENKFFVDKVIAVVNRDVITWSELYKYMEFTAKDEIKALN 85
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
E+ ++ LI L+ +E EK GI + + + L+ + F
Sbjct: 86 PDEKFKYFKAHEEEFLERLIDTKLQIEEAEKYGIFVTDSEIEGAINDIKKKYALTEQAFL 145
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YL 179
L K+G+ N +K+ L Q I + K + EI ++ + Y
Sbjct: 146 ETLKKEGMSINDYKKMLKEQIIIGRALNTLVKSKIIITDAEINNYIAAHPELSCDDEGYY 205
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ + K +NQ ++ +I + + ++ + + + + G L +
Sbjct: 206 VSQIFLK----KRENQEELKAKINEVFKRLIQGEPFSKVASQMSEDVTAKTGGAIGLLKK 261
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
++ + NL K + P +T+ G+ + G L Y+ + K +
Sbjct: 262 KEIASELSNLFSKMNIGQVSEPMMTEHGIFIFRLDGVCFKKGSEQLVNYVRSLLEDEKFK 321
Query: 299 KHEAEYVKKLRSNAIIH 315
K + + LR A I
Sbjct: 322 KDYKLWTRGLRQRAYIE 338
>gi|120602308|ref|YP_966708.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris DP4]
gi|120562537|gb|ABM28281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris DP4]
Length = 343
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 112/293 (38%), Gaps = 30/293 (10%)
Query: 41 RIRTTINGEVITDGDISK-------RIALLKLQKINGEL----EKIAVQELIVETLKKQE 89
RI +NGE+IT D+ R L ++ + E + + +I + L QE
Sbjct: 60 RIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSMISDILISQE 119
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
E+ IT + V+ + + + + L+ E F L +QG+ + ++ + + ++
Sbjct: 120 AERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRRGILRHRLLG 179
Query: 150 NDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
K EI K + ++ R+ + V+F D+ V+ +
Sbjct: 180 LMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLVIFPPRDDADALAAQVKSGAMTFAD 239
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
R N + IG + SDL ++++ L + + + ++ +
Sbjct: 240 LAARHSIGPNPQ-------NGGVIGDLLW---SDLSMEWRDTLSELKPGDVSRVFLVEGR 289
Query: 267 VEYIAIC----DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K ++A + + K+++ EY+ +LRS A+I
Sbjct: 290 KAVLQLVASNEGKGQALDDVAEE--IENILREPKMQERLQEYIGQLRSRAVID 340
>gi|163750061|ref|ZP_02157304.1| survival protein surA [Shewanella benthica KT99]
gi|161330118|gb|EDQ01100.1| survival protein surA [Shewanella benthica KT99]
Length = 434
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 106/310 (34%), Gaps = 15/310 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K + I+ + ++ R+ IN ++ + +I+ + +K
Sbjct: 1 MKPCKHLIIAILSLAMSHMALAENTTLDRVSVQINEGIVLESEITNMVKTVKANATAAGQ 60
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ A+ L+ E +
Sbjct: 61 SLPSDQALRTQVIERLIMTRLQMQMADRIGLHIGDLQLDQTIGNIAKEQKLTVEQMRQKI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRT 182
+G+ +++ L + ++ + + EI + + E+ I
Sbjct: 121 SNEGMNWGQYREQLREEITLGEIQRIQVQRRIQVSPQEISNLVNMIEEQGLKQIEFQIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA-QYLLESD 241
+L IP+N Q + R++ D ++ AS G Y+ ++
Sbjct: 181 ILIEIPNNPTSEQLEKASNRANTVLDRVKDSGDFRRMAIAASAGPKALEGGIWDYMNINE 240
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTPTKI 297
+ F +L + + P + G I + D R L + ++ + +P
Sbjct: 241 MPTLFAEVLSNAKKGDIIGPIRSGAGFHIIKVIDARGLQTKEVDEVRSRHILVKPSPILS 300
Query: 298 EKHEAEYVKK 307
E+ + K
Sbjct: 301 EERAKAMLDK 310
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226
+ ++ V E R +L + + + ++ + + + D L + S+
Sbjct: 276 RGLQTKEVDEVRSRHIL--VKPSPILSEERAKAMLDKFVKQIRAGDADFAALARQYSEDP 333
Query: 227 -HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + S P F L + N + P+ + G + + ++R
Sbjct: 334 GSGAKGGELGWADPSVYVPAFSQALNELKVNEISEPFRSSHGWHIVQLEERRTTDATDKF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R+ A I +
Sbjct: 394 NTNKAHQLIFRRKFNEELQAWLDEMRAEAYIEVF 427
>gi|254517383|ref|ZP_05129440.1| chaperone SurA [gamma proteobacterium NOR5-3]
gi|219674221|gb|EED30590.1| chaperone SurA [gamma proteobacterium NOR5-3]
Length = 412
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 92/245 (37%), Gaps = 6/245 (2%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + LI+E ++ Q + G+ ++ + A GL+ E F+ L+++G
Sbjct: 57 RETLDRLILENIQIQMGARFGVRISDAQLDQAMARIAGQNGLTPEQFAMLLEQEGRSYGE 116
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNK 191
+Q + + I V + + E EI + ++ + + EY I L I +
Sbjct: 117 IRQNIEREMIIQRVQQGNVNQLIQISEQEIENYLSTEEGQKLVQPEYRIIHALLPITSDT 176
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL- 250
+ + + R+R + + + + S G + DL FQ +
Sbjct: 177 SETEVAQSTAYCETLVERIRSGEPFDAVMASVPPQYVFSGGDLGWRKLDDLPSLFQEVAP 236
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ T + + + G+ + + D+R D+ ++ + + ++ +
Sbjct: 237 TLGRGETADLFQSPSGLHIVTMADQRGGGDMTINQTKVRHILIEPSEILTDEQARALAVE 296
Query: 308 LRSNA 312
L++ A
Sbjct: 297 LKARA 301
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A+++ ++T+ + +R +L + Q + + ++R +D L + S
Sbjct: 259 ADQRGGGDMTINQTKVRHILIEPSEILTDEQA---RALAVELKARAEAGEDFGDLAREYS 315
Query: 225 KI--HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--DLG 279
+ G + + P+F+N + ++ N + P +Q G + + D+R D+
Sbjct: 316 EDIGSAAEGGDLGWTSPGQMVPEFENTMASTEINTISAPVRSQFGWHILEVLDRREKDVT 375
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
++ KA + K ++ +++K+R A
Sbjct: 376 EDM-RKAQVREFLHGRKYQEELDAWLRKIRDEA 407
>gi|167622857|ref|YP_001673151.1| SurA domain-containing protein [Shewanella halifaxensis HAW-EB4]
gi|167352879|gb|ABZ75492.1| SurA domain [Shewanella halifaxensis HAW-EB4]
Length = 434
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 105/309 (33%), Gaps = 15/309 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K +I + + + R+ IN +I + +++ + ++ N
Sbjct: 1 MKRCNQLIFALITLAMSQTIHAAPEPLDRVTVQINEGIILESEVTGMVKTIRANAANAGQ 60
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ A+ ++ + +
Sbjct: 61 KLPSDTALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKMTVAQMKAQI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRT 182
+ +G +++ L + ++ + + EI + + + + E+ I
Sbjct: 121 ESEGTTFAQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKLINEQGLKEVEFQIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESD 241
+L +P + Q + RL+ D +S + G Y+ ++
Sbjct: 181 ILIDVPSDANSQQLEAASKRAAVVMKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINE 240
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKI 297
+ F ++ + P + G I + D R L + + ++ + +P
Sbjct: 241 MPTLFAEVVTDAKTGDIIGPIKSASGFHIIKVMDARGLETKEVKEVKSRHILLKPSPILS 300
Query: 298 EKHEAEYVK 306
E+ +
Sbjct: 301 EERAKSMMD 309
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 50/154 (32%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ V+E R +L + + ++ + + L + S+
Sbjct: 276 RGLETKEVKEVKSRHILLK--PSPILSEERAKSMMDRFLTQVKSGEAKFEDLARQYSEDP 333
Query: 228 D--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + + P F L + + P+ + G + + ++R
Sbjct: 334 GSAAKGGELGWADPNIYVPAFAQELNSLEIGGYSEPFRSTHGWHIVQLEERRTTDATDKF 393
Query: 285 KAYLSAQNTP-TKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R+ A I +
Sbjct: 394 NTNRAHQLIYRRKFNEELQNWLDEMRAEAFIDIF 427
>gi|42521666|ref|NP_967046.1| survival protein SurA precursor [Bdellovibrio bacteriovorus HD100]
gi|39574196|emb|CAE77700.1| survival protein SurA precursor [Bdellovibrio bacteriovorus HD100]
Length = 307
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 103/295 (34%), Gaps = 24/295 (8%)
Query: 40 SRIRTTINGEVITDGD-------------ISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ +N E++ + D + + + K K + LI E +
Sbjct: 13 EKTVAIVNSELVLESDFKDLVKRIPKQGMVDESLLFDKPATSLIGNRKAQLDYLINEKIL 72
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+ EI++ + ++ V + AR +S + + + +QG+ + ++++L
Sbjct: 73 QSEIKRLNLAVTNDRVESELKEMARKNQVSEAELAKVIQQQGVSMDDYRRFLKDSIEKRS 132
Query: 147 VVKNDFMLKYGNLEMEIPAN---KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + + K + + ++ E+ + + F N + +
Sbjct: 133 LMDAEIISKLRISDEDALNEYLKTNPNNRPSIDEFSVSHIFF----NPKKGGAEASIKRA 188
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY- 261
+ +LR ++ L + S+ + + G + P+ + + + N T P
Sbjct: 189 ETVLGKLRSGENFENLAQQFSEDPNFSTGGALGTFKSGEFLPEIEEAISSLKVNETTPIV 248
Query: 262 VTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ G + + K+ K + AQ ++ +++ R + I
Sbjct: 249 KSRMGFHIVKLTGKKLTTDPKFERAKDKIKAQLLENSFKRQLKNWLQTKRDESFI 303
>gi|323697784|ref|ZP_08109696.1| SurA domain [Desulfovibrio sp. ND132]
gi|323457716|gb|EGB13581.1| SurA domain [Desulfovibrio desulfuricans ND132]
Length = 323
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 108/314 (34%), Gaps = 24/314 (7%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-----------LLKLQ 66
+ + + I P+ + + RI IN ++T D+ + + + Q
Sbjct: 6 SLLLGAMLLICPLTAQAEDVVVDRILVKINDSIVTQYDLDQEMKPVYDQIKDRKLTAREQ 65
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + A+ +L+ + L +QEI++ + ++ + L+ E+F + +
Sbjct: 66 TQLEGLRRQALDKLVNDVLIQQEIKRFSVEVSDENIDKEIERVRTERKLTLEEFQQMVAQ 125
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G+ F+ L +++ + K + EI + K+ ++ +
Sbjct: 126 DGLSMEEFRSRLKKLLEKQELIGHMVNSKVVVTDSEIQQEYEARKDDYSMGKMVELAIIL 185
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+P + + + + K K SIG+ + DL +
Sbjct: 186 LPSEVSPVEV-----RERITSGEMTFAEAVAKYSVGPGKESGGSIGELSW---EDLADDW 237
Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYI---AICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
QN LK S + P Q + I + R + E K E
Sbjct: 238 QNALKGVSVGGVSTPLTIQNHQALLSPVKINEDRIVPLEDVRDDIYKD-LMQKKRETVFT 296
Query: 303 EYVKKLRSNAIIHY 316
+Y KL+ +A+I Y
Sbjct: 297 DYFNKLKQSAVIIY 310
>gi|94309382|ref|YP_582592.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus
metallidurans CH34]
gi|121956449|sp|Q1LRA3|SURA_RALME RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|93353234|gb|ABF07323.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Cupriavidus
metallidurans CH34]
Length = 493
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 24/312 (7%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKI 75
+ + S + + +N VIT ++ R ++ Q +L
Sbjct: 66 MMGVPQPSSQPRSQLVDEVVAVVNNSVITRRELLDRADEIESQLRAAKREVPPRPDLLGE 125
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++ L++E ++ Q +++GI V+ A+ +SA + S ++ G+ ++
Sbjct: 126 VLERLVMERVQTQAAQEAGIKVTDQEVDRAIESVAQQNKMSATELRSRVEASGMSWTKYR 185
Query: 136 QYLAIQS----IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDN 190
L Q + V + + G ++ + A + E+ + +L +P++
Sbjct: 186 DELRKQVQVIRLREREVDSKVQVYDGEIDNYLAARNGGQAAASGPTEFNVAQILVRVPED 245
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
Q K + +++ D +L K S+ + S G + L F N
Sbjct: 246 ASDAQKAQLKTKAEGLLKQVQGGADFAELAKANSEAPEASQGGSLGFREIGRLPAVFANA 305
Query: 250 LKKSQNNTTNPYVTQ--KGVEYIAICDKRDLGGEIALKAYLSA--------QNTPTKIEK 299
+ Q P V + G + + KR + A ++ + P E
Sbjct: 306 VVDLQPGAVVPEVLESANGFHVVKLVSKRTAAAQPAASDRIAQTQVRHILIRTGPNMPEA 365
Query: 300 HEAEYVKKLRSN 311
+ +R
Sbjct: 366 EAKRQMATIRDR 377
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A Q + + + +R +L N + ++++ + + +++
Sbjct: 336 AAAQPAASDRIAQTQVRHILIRTGPNMP--EAEAKRQMATIRDRITHGVDFADAARRYSQ 393
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
G+ ++ +L P+F+ + + ++P VTQ GV I + ++R+
Sbjct: 394 DGSASQGGELGWVSPGELVPEFEQAMNRLRPGEISDPVVTQFGVHLIQVENRRETEVSPE 453
Query: 284 LKAYL-SAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ A+ K+ ++V++LRS A + Y
Sbjct: 454 KQRDFARAEVREQKLRAAYDDWVRQLRSAAYVEY 487
>gi|85858737|ref|YP_460939.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB]
gi|85721828|gb|ABC76771.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB]
Length = 322
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 118/320 (36%), Gaps = 18/320 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-----------ISKRIA 61
+K L + L++ ++ + ++ + RI +N E+IT + I
Sbjct: 1 MKKLQIFTFLLLSVLMATLQARA-EIVDRIVAFVNDEIITLHELNTAFEPYRKKIDDSYK 59
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+I E + +I L +QE +KS I V + + + F
Sbjct: 60 GTDKDRIMSETRLTLLNRMIDNLLIEQEAKKSAIAVSDEEVMASIRDNLARRKTTMDAFQ 119
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYL 179
L ++G +K+ + + +++ + K + EI + +
Sbjct: 120 QSLAREGTNFEDYKKEMRDSMVRTRLLRREVRSKVTVNDEEIGEYYRLHREEYEGKDAVK 179
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLL 238
++ +L P N +N + RLR+ + + +F+ G ++
Sbjct: 180 LKHILLLFPGNMDENAKAKLQADAMEILKRLRMGESFDSLAARFSQGPAASDGGNVGFVE 239
Query: 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPT 295
+ + P+ + ++ ++ + G I + D+R G + +A + ++
Sbjct: 240 KGAMLPEVEKAAFSLDRDKISDLIESPVGFHIIKVIDRRGPGLKPIEEVRAEIKSRLEDG 299
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
KIEK ++ +LR+ +++
Sbjct: 300 KIEKKFDSWISELRAKSLVE 319
>gi|327398211|ref|YP_004339080.1| SurA domain-containing protein [Hippea maritima DSM 10411]
gi|327180840|gb|AEA33021.1| SurA domain protein [Hippea maritima DSM 10411]
Length = 287
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 93/281 (33%), Gaps = 26/281 (9%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+I T+NG+ IT ++ ++ +N + E+I + L +Q GI
Sbjct: 28 DKIIATVNGKPITTYELQNLAGFYRVNNLN-----TLLNEVIDDYLIRQYANNMGIIVSD 82
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V + Q A LS ++F + L + I N++K+ + ++ + F+
Sbjct: 83 EDVEKYIQQMAEANNLSEDEFLAKLKESNIDLNYYKEGIKLRLYRIKFARRVFLSSIKIT 142
Query: 160 EMEIPANKQKMK---NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ +I K + ++ + + + ++K K
Sbjct: 143 DKDIENYYNLHKDKFKGKSKVLVLSIITLGDLETAKKVYSLLKK------------GKSF 190
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L S + + L L + LL N T+ + + +
Sbjct: 191 EDLLNKYSTTKESTRKVPIETLNPYLQ---KKLLSLKPNQYTDIIQSAGKFYIVKLLGTE 247
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ +K + +I ++K +R+ + I +
Sbjct: 248 EGES---IKDTIRNTLIDQQITAKLKSWLKMIRARSDIEVF 285
>gi|113866541|ref|YP_725030.1| peptidyl-prolyl cis-trans isomerase (rotamase c)protein [Ralstonia
eutropha H16]
gi|113525317|emb|CAJ91662.1| Peptidyl-prolyl cis-trans isomerase (rotamase c)protein [Ralstonia
eutropha H16]
Length = 491
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 98/296 (33%), Gaps = 24/296 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIE 91
+ +N VIT ++ R ++ Q +L ++ L++E ++ Q +
Sbjct: 80 DEVVAVVNNSVITRRELLDRADEIEGQLRAAGRPVPARADLLGEVLERLVMERVQTQAAQ 139
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----IWPDV 147
++GI ++ A+ L+A + ++ G+ +++ L Q +
Sbjct: 140 EAGIRVTDQEIDRAIESVAQQNRLNATELRRRVEASGMTWTKYREELRKQVQVIRLRERE 199
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V + + G ++ + A + EY + +L +P+N Q Q+ +
Sbjct: 200 VDSKVQVYDGEIDNYLAARGGQGAASGPTEYNVAQILVRVPENASDAQKQAQRAKAEGLL 259
Query: 208 SRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK- 265
+ + D +L + S G + L F N + Q P V +
Sbjct: 260 KQAQGGADFAQLAQANSEGPEAAQGGAMGFREIGRLPALFANAVVDLQAGGVAPQVVESA 319
Query: 266 -GVEYIAICDKRDLGGEI---------ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G + + KR ++ + P E + LR
Sbjct: 320 AGFHVVKLVAKRAAPASSPAAASKITQTQVRHILIRTGPNMPEAEARRQLSTLRDR 375
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+ + +R +L N + ++++ + + ++F+ + G
Sbjct: 344 ITQTQVRHILIRTGPNMP--EAEARRQLSTLRDRITHGGDFADAAKRFSQDGSAQNGGDL 401
Query: 235 QYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQN 292
++ +L P+F+ + + N + P VTQ GV I + ++R+ + A+
Sbjct: 402 GWVSPGELVPEFEQAMSRLRPNEISEPVVTQFGVHLIQVLNRRETEMSPEKQRDFARAEV 461
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316
K+ ++V++LRS A + Y
Sbjct: 462 REQKLRAAYDDWVRQLRSQAYVEY 485
>gi|116750899|ref|YP_847586.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter
fumaroxidans MPOB]
gi|116699963|gb|ABK19151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter
fumaroxidans MPOB]
Length = 326
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/320 (15%), Positives = 112/320 (35%), Gaps = 25/320 (7%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KING 70
+ +L++FC++ + RI +NGE+I ++ +R+ L++ + N
Sbjct: 2 RMAGCVLLVLFCVIAASGRCAADSLDRIVAVVNGEIILYSELQERLQLVQKSLPETRTND 61
Query: 71 ELEKIAVQ-----ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
K A++ ++ E L +QE ++ IT V+ + +S + L
Sbjct: 62 PARKAAIERELLQQMTREKLTEQEAKRLKITVTKKDVDEAIAFVMADHNVSQAQMEARLK 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ------KMKNITVREYL 179
+ G F++ L +++ K E +I A +++ EY
Sbjct: 122 ESGQSMEEFRKVLTKDLERDRLLERVLKSKILISEKQIDAFLSQSPPEVRVEPRGKEEYR 181
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ + P + +KR ++ E +++ G ++
Sbjct: 182 LGIIFL--PASDGAEGKQAEKRAREIREKLKAGEDFAAMARQYSKGPAAQDGGDVGFVSL 239
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA-------LKAYLSAQ 291
+L P +K + N ++ G + D R + A ++ Q
Sbjct: 240 DELAPFIAKNVKDLKINQPSDVVKGGDGYYIFLVTDVRRAEMQAAQNSPATNMRERARRQ 299
Query: 292 NTPTKIEKHEAEYVKKLRSN 311
++ + E++K L S
Sbjct: 300 LYQQEMARRFDEWIKDLESR 319
>gi|163855066|ref|YP_001629364.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii DSM
12804]
gi|163258794|emb|CAP41093.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii]
Length = 516
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 89/282 (31%), Gaps = 32/282 (11%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKI------NGELEKIAV 77
P + + I +N +VIT ++ A L+ L + +
Sbjct: 45 ATAPQPAPQGEQFVDGIAAVVNKDVITLREVESGAARATEDLKHRGIQVPPPDVLRRQVL 104
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
Q LI+E L+KQE ++ GI + ++ A + + ++K G+ ++Q
Sbjct: 105 QSLIMERLQKQEADRLGIRVNDAQIDQAIETIAGRNRIPVAQMRAEIEKSGVTWAQYRQS 164
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPA-------------------NKQKMKNITVR-- 176
L + + + E+ A Q+ T
Sbjct: 165 LGNDIRMNRLRQRAVDSNIIITDAEVDAFLKDRAHNPAAGTGFSGQPAGQRAPQPTQSGP 224
Query: 177 -EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ + +L +P+ ++ ++ + ++L+ D L +S + G
Sbjct: 225 EQVALAQILVRVPEGASSSEVARLRKKAEGLLAQLQQGGDFANLAASSSDGPEALQGGVM 284
Query: 236 YLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
D P + + + + G + + D+
Sbjct: 285 GARPLDGWPDLFIKAIASLQPGQVSGLIQSGNGFHILKVLDR 326
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/149 (11%), Positives = 54/149 (36%), Gaps = 5/149 (3%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ V + R +L + + + ++R++ + + + + S+ +
Sbjct: 356 QGPVQVTQTHARHILIKT--SAVMSDDQARQRLEQIRQRIVNGGASFADMARQYSQDANA 413
Query: 230 -SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286
G ++ ++ P F+ + + P ++ G I + ++R+ + +
Sbjct: 414 PQGGDLGWVNPGEMVPSFEQAMNALPVGGVSQPVLSPFGWHLIQVEERREHDVSDELQRM 473
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ E +++ +LR+ A I
Sbjct: 474 QARQILFERRAEPAFEDWLAQLRNEAYID 502
>gi|127511815|ref|YP_001093012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica
PV-4]
gi|126637110|gb|ABO22753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica
PV-4]
Length = 434
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 111/313 (35%), Gaps = 21/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K ++ + + R+ IN ++ + +I + +LK K N
Sbjct: 1 MKPCKQLIFALLTLAMSHGAMAENVPLDRVTVQINEGIVLESEI---VNMLKTVKANAKA 57
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L ++ LIV L+ Q ++ G+ ++ A+ ++ E
Sbjct: 58 AGQSLPSDKALRTQVIERLIVTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKMTPEMMR 117
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYL 179
++ +G+ + +++ L + ++ + + EI + + + + + EY
Sbjct: 118 EKVEAEGMSWSQYREQLREEITLGEIQRIQVQRRIQVSPQEINSLVKLIEEQGMQQVEYQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLL 238
I +L +P++ Q +A RL+ D + +S + G Y+
Sbjct: 178 IGHILIEVPNSPNSEQLEAASSRANAVLKRLQDNADFKQTAIASSSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F LL + P + G I + D R L + ++ + +P
Sbjct: 238 VNEMPTLFAELLVGAKTGDIIGPVRSGAGFHIIKVMDARGLQTKEIDEVRSRHILIKPSP 297
Query: 295 TKIEKHEAEYVKK 307
E+ + K
Sbjct: 298 ILSEERAKAMLDK 310
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ + E R +L I + + ++ + + R D L + S+
Sbjct: 276 RGLQTKEIDEVRSRHIL--IKPSPILSEERAKAMLDKFAAQLRRGEADFATLARQYSEDP 333
Query: 228 D--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + + P F L + N + P+ + G + + ++R
Sbjct: 334 GSAAKGGELGWADPTVYVPAFAQTLGALKINEISEPFRSSHGWHIVQLEERRKTDATDKF 393
Query: 285 KAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R+ A I +
Sbjct: 394 NTNRAHQLIFRRKFNEELQNWLDEMRAEAYIEVF 427
>gi|317485407|ref|ZP_07944286.1| SurA domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316923366|gb|EFV44573.1| SurA domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 308
Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/320 (15%), Positives = 120/320 (37%), Gaps = 32/320 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--ING 70
+++++T F+L P+ A + + +NGE+IT D+ A +++
Sbjct: 1 MRIVSTAFLLFFLITSPV-----RAAINGVAAVVNGEMITAFDLQAETAPEAMRRGLNPK 55
Query: 71 ELEKIA---------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ + A ++ +I + QE ++ I+ + V+ Q ++ E+F
Sbjct: 56 DPNQAAAIEELTKATLERMINNIILTQEAQRLKISVGDSEVDNEIQQIMSRNKMTPEEFQ 115
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
L Q + F++ + + ++ N K + EI + K + +R
Sbjct: 116 RQLQIQRTTEKDFRERIRSSILRNRLLANMVGRKVIVTKEEIADYYNQHKQTFMNNQKVR 175
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK-DCNKLEKFAS-KIHDVSIGKAQYLLE 239
+ P + +A+ +R+R K + + S G +
Sbjct: 176 FAVIVYPPTEN----------AEAQAARIRSGKLSFEQAARQVSVGPRAQEGGDVGVVDW 225
Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQ--NTPT 295
+ L P +Q+ L + + + + G++ + + G+ +A +
Sbjct: 226 NSLDPTWQDRLSQLKPGDVSGLFEVNNGLKGQLKLLSMESGDGQTLEEATPQIERILREP 285
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
K+++ EY ++LR A++
Sbjct: 286 KLQERFREYSEQLRKRAVVE 305
>gi|87119766|ref|ZP_01075663.1| peptidyl-prolyl cis-trans isomerase SurA [Marinomonas sp. MED121]
gi|86165242|gb|EAQ66510.1| peptidyl-prolyl cis-trans isomerase SurA [Marinomonas sp. MED121]
Length = 416
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 108/307 (35%), Gaps = 21/307 (6%)
Query: 21 VLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIALLKLQ----KINGELE 73
+ + C +++ +++ I I+ + I D DI+ R +++K + KIN +
Sbjct: 4 IATLLCSSLLIASSFSVAATKVDGISAIIDSKAILDSDINTRFSIIKDRVPGGKINDNVR 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + ++I ETL+ + GI N + A L L +QGI +
Sbjct: 64 RQILNQMINETLQTNYANRLGIRISEQEANQAVLNVAAKMKLDLAGLKVALAQQGIDYSI 123
Query: 134 FKQYLAIQS----IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ + + + VV+ ++ +E + +++ KN + +R +L
Sbjct: 124 YRNQIKNEILLGKVKGQVVRQRIIISDQEIEDFLNSDEALAKN--NDQVHLRHILIRDNA 181
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + + K E ++ ++S + G + + L F
Sbjct: 182 SSQSADQILTIKEKITNEQ-----DFIDQAIAYSSGQAALEGGDLGWRPLNQLPLLFIKS 236
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVK 306
L + P + G + + +K+ E ++ + + ++
Sbjct: 237 LNANNGPLYGPIESSAGQHLLWLKEKKTASNALQEQTKSRHILLSANEIRNQTQTKAALE 296
Query: 307 KLRSNAI 313
+ +
Sbjct: 297 AIYQRLM 303
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 52/291 (17%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGL-------------- 115
E+++ +K Q + + I + F A+N
Sbjct: 125 RNQIKNEILLGKVKGQVVRQR-IIISDQEIEDFLNSDEALAKNNDQVHLRHILIRDNASS 183
Query: 116 -SAEDFSSFLDKQGIGDNHFKQYLA----------IQSIWPDV----------VKNDFML 154
SA+ + +K + Q +A W + + +
Sbjct: 184 QSADQILTIKEKITNEQDFIDQAIAYSSGQAALEGGDLGWRPLNQLPLLFIKSLNANNGP 243
Query: 155 KYGNLEMEIPA------NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
YG +E K+ N + R +L S + + Q Q K +A
Sbjct: 244 LYGPIESSAGQHLLWLKEKKTASNALQEQTKSRHILLSANEIRNQTQ---TKAALEAIYQ 300
Query: 209 RLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
RL +D L K S+ + G + + + P+F+ ++K + + P+ +Q
Sbjct: 301 RLMKGQDFATLAKEFSEDKGSALKGGDLDWTAKGTMVPEFEAVMKATSVGEISKPFRSQY 360
Query: 266 GVEYIAICDKR-DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G + + +R + + K + ++++ +L+S A I
Sbjct: 361 GWHILKVEGRRSQDISDKIKQVNAKNTLIARKQDLVLSQWLDELKSTAFID 411
>gi|157960692|ref|YP_001500726.1| SurA domain-containing protein [Shewanella pealeana ATCC 700345]
gi|157845692|gb|ABV86191.1| SurA domain [Shewanella pealeana ATCC 700345]
Length = 434
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 103/309 (33%), Gaps = 15/309 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K ++ + + R+ IN +I + +++ + +K N
Sbjct: 1 MKRCNQLIFALLTLAMSQTIQAAPEPLDRVTVQINEGIILESEVAGMVKTIKANAANAGQ 60
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ A+ ++ + +
Sbjct: 61 KLPSDTALRTQVIERLILTRLQLQMADRIGLHIGDLQLDQTIENIAKEQKITVAQMKAQI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRT 182
+ +G +++ L + ++ + + EI + + + E+ I
Sbjct: 121 ESEGTTFAQYREQLREEITLGEIQRIQVQRRIQVSPQEINNLVKLINEQGLKEVEFQIGH 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESD 241
+L +P + Q + RL+ D +S + G Y+ ++
Sbjct: 181 ILIDVPSDANSQQLEAASKRSATVMKRLKDGDDFRSIAIAASSGPKALEGGIWDYMNINE 240
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKI 297
+ F ++ + P + G I + D R L + + ++ + +P
Sbjct: 241 MPTLFAEVVGDAKTGDIIGPIKSASGFHIIKVMDARGLQTKEVQEVKSRHILLKPSPILS 300
Query: 298 EKHEAEYVK 306
E+ +
Sbjct: 301 EERAKSMMD 309
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 50/154 (32%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ ++ V+E R +L + + ++ + + L + S+
Sbjct: 276 RGLQTKEVQEVKSRHILLK--PSPILSEERAKSMMDRFLAQVKSGEAKFEDLARQYSEDP 333
Query: 228 D--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G+ + + P F L + + P+ + G + + +KR
Sbjct: 334 GSAAKGGELGWADPNIYVPAFSQELNSLEVGAYSEPFRSTHGWHIVQLEEKRTTDATDKF 393
Query: 285 KAYLSAQNTP-TKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R+ A I +
Sbjct: 394 NTNRAHQLIYRRKFNEELQNWLDEMRAEAFIDIF 427
>gi|189423767|ref|YP_001950944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi
SZ]
gi|189420026|gb|ACD94424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi
SZ]
Length = 355
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 94/292 (32%), Gaps = 17/292 (5%)
Query: 41 RIRTTINGEVITDGDI-SKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIE 91
+ +N ++IT ++ + A+++ + G L + + LI + L +Q+I+
Sbjct: 56 GVAAIVNDDIITFREVLRESQAVIQDAQKKGLVDDTARHNLRVMVLDRLIEKLLTEQKIK 115
Query: 92 KSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ GI + + R ++ + L QG ++ L Q +V
Sbjct: 116 ELGIKIGDDEIRQAIDDVKRQNNNMTQSQLEAALKSQGYTFAQYEVQLREQLERLRLVSM 175
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ K E E Q + E + + + + +Q
Sbjct: 176 EVRSKIYVSEKEAEEYYQSHLSSYAEEETFKASHIFIKVDEKAPADQIQQAMNKALKVLF 235
Query: 209 RLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265
R KD +L + S G ++ + +L T
Sbjct: 236 EARQGKDFAQLAREYSDDAAAKKDGGSLGTFKRGEMLADLEKAILPLKPGEVGELVSTPS 295
Query: 266 GVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G+ + + + +KA +S K + ++K+LR+ A I
Sbjct: 296 GLHIVKLDERSSGKVKPFETVKADISDLLYRQKQDSRFTSWMKELRTKASIE 347
>gi|197124851|ref|YP_002136802.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
gi|196174700|gb|ACG75673.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
Length = 336
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 99/294 (33%), Gaps = 18/294 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------------KINGELEKIAVQELIVETLKK 87
R+ +NG+V+T ++ +R A L L K + + A +++ + L
Sbjct: 35 DRVAAIVNGDVVTLQELEQRAAALGLAAADALPAGPARDKARADALRRAFDQVVSDKLFA 94
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
++ ++ I V+ + G + S L +G ++ + + +
Sbjct: 95 EKAKELEIEVTEKQVDDAIEGVKKQNGFTDAQLESALASEGYSMTDYRARIRRELQNFSL 154
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ K E ++ Q E +R + + +
Sbjct: 155 LQYKVAGKIKTSEEDLRNYYQSHPQEFDGEDEVRVRHIFIPFAEGGGAQAEAQARAEGQR 214
Query: 206 EESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVT 263
RL+ +D + + G+ +L +H ++ +
Sbjct: 215 VLQRLKTGEDFGAVAKAVSRGPSAEEGGELGWLKRGTIHRTLEDAAFALKTGEMSGLVEA 274
Query: 264 QKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
GV + + ++R GG+ + + + + E + +YV +LR +A+I
Sbjct: 275 GPGVHILKVEERRRGGGKSFEQARDEIRQRLGEEQAENYRQQYVAELRRDALID 328
>gi|220919569|ref|YP_002494873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219957423|gb|ACL67807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 338
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 99/294 (33%), Gaps = 18/294 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------------KINGELEKIAVQELIVETLKK 87
R+ +NG+V+T ++ +R A L L K + + A +++ + L
Sbjct: 37 DRVAAIVNGDVVTLQELEQRAAALGLAAADALPAGPARDKARADALRRAFDQVVSDKLFA 96
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
++ ++ I V+ + G + S L +G ++ + + +
Sbjct: 97 EKAKELEIEVTEKQVDDAIEGVKKQNGFTDAQLESALASEGYSMTDYRARIRRELQNFSL 156
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ K E ++ Q E +R + + +
Sbjct: 157 LQYKVAGKIKTSEEDLRNYYQSHPQEFDGEDEVRVRHIFIPFAEGGGAQAEAQARAEGRR 216
Query: 206 EESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVT 263
RL+ +D + + G+ +L +H ++ +
Sbjct: 217 VLQRLKTGEDFGAVAKAVSRGPSAEEGGELGWLKRGTIHRTLEDAAFALKTGEMSGLVEA 276
Query: 264 QKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
GV + + ++R GG+ + + + + E + +YV +LR +A+I
Sbjct: 277 GPGVHILKVEERRRGGGKSFEQARDEIRQRLGEEQAENYRQQYVAELRRDALID 330
>gi|110589212|gb|ABG77115.1| peptidyl-prolyl cis-trans isomerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 241
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 4/201 (1%)
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI L+ Q + GIT D T++ ARN +S L+ GI HF++ L
Sbjct: 1 LITNQLQLQTATRLGITVDDATLSRTIASIARNNNISLNRLRETLESDGINFTHFREKLR 60
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGF 197
+ I + + + + + E ++ ++ + + + + I+ +L + P+
Sbjct: 61 REIIINRLRQKEVVNRIVITEQDVRSHMAREAGSSRQRAAFHIQHILIATPEGAAPEDVQ 120
Query: 198 VQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255
+ + LR D + + + + G ++ + + F +L+ +
Sbjct: 121 AARGKAEQLVLELREGADFSSTAIRESDGRQALEGGDLGWIEAARVPSIFTHLMDQLEPG 180
Query: 256 NTTNPYVTQKGVEYIAICDKR 276
+ ++P G I + + R
Sbjct: 181 DISDPVRNASGFHIIKLVEVR 201
>gi|73540204|ref|YP_294724.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
gi|121956447|sp|Q475Q3|SURA_RALEJ RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|72117617|gb|AAZ59880.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
Length = 499
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 16/253 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIE 91
+ +N VIT ++ R ++ Q ++ LI+E ++ Q +
Sbjct: 83 DEVVAVVNNSVITRRELLDRADEIEAQLRTANRPAPPRADLLGEVLERLIMERVQTQAAQ 142
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+GI ++ A+ LSA + ++ G+ ++ L Q + + +
Sbjct: 143 DAGIKVTDQELDRAIESVAQQNRLSATELRRRVEASGMTWTKYRDELRKQVQVIRLRERE 202
Query: 152 FMLKYGNLEMEIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
K + EI Q E+ + +L +P+N Q ++ +
Sbjct: 203 VDSKVQVYDGEIDNYLAARGGQGAAATGPTEFNVSQILVRVPENASDAQKQELQKKAEQL 262
Query: 207 ESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ- 264
+ + D +L + S G + L F N + Q P V +
Sbjct: 263 LKQAQGGADFAQLAQANSQGPEAAQGGAIGFREIGRLPALFANAVVDLQPGAVAPEVVES 322
Query: 265 -KGVEYIAICDKR 276
G + + KR
Sbjct: 323 ANGFHILKLTAKR 335
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+ + +R +L N + ++++ + + ++F+ + G+
Sbjct: 352 ITQTQVRHILIRTGPNMP--EAEARRQLGTLRDRITHGGDFADAAKRFSQDGSAQAGGEL 409
Query: 235 QYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQN 292
++ +L P+F+ + + + P VTQ GV I + ++R+ + A+
Sbjct: 410 GWVSPGELVPEFEQAMNRLRPGEISEPVVTQFGVHLIQVENRRETEMAPEKQRDFARAEI 469
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316
K+ ++V++LRS A + Y
Sbjct: 470 REQKLRAAYDDWVRQLRSQAYVEY 493
>gi|329894605|ref|ZP_08270411.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [gamma proteobacterium IMCC3088]
gi|328922959|gb|EGG30287.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [gamma proteobacterium IMCC3088]
Length = 421
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 116/312 (37%), Gaps = 17/312 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-------LQ 66
+L+ L + C + + + + ++ ++ +VI + ++ +R+ ++K L+
Sbjct: 3 QLVKLAAGLALGCAISG-AQAAVEILDKVIAVVDDDVIMESELQERLIVVKNNITSRGLE 61
Query: 67 KINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ L + + LI+E+++ Q+ + GI + + + A GL+ + F L+
Sbjct: 62 APPEDALVRETLDRLILESIQLQKGVRYGIRIEDQQLAAAVGRLASQNGLTPQQFVDQLE 121
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTV 183
+ G + + I V + + EI A + + Y +
Sbjct: 122 QSGGSYGELLANIEREMIIQRVQGGNVNQRIDITTAEIEAFLDTEEGQQLIQPAYRLIHA 181
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ D+ + + ++ R+ ++ N++ ++ + G ESDL
Sbjct: 182 RLDVSDDIDLDAA---RTYVESLAERINAGEEFNEVIGASTDPYQFKGGDLGIRPESDLP 238
Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--EKH 300
F + Q + P + +I + +KR I + P++I +
Sbjct: 239 SLFAPIAPTMEQGSFAGPIENGRSFHFIYLLEKRGGTQIIPQTSVRHILIKPSEILTNEQ 298
Query: 301 EAEYVKKLRSNA 312
E +LR A
Sbjct: 299 AQELAAELRQRA 310
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 56/147 (38%), Gaps = 5/147 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+ + + +R +L I +++ Q+ + + L + +++ I
Sbjct: 272 RGGTQIIPQTSVRHIL--IKPSEILTNEQAQELAAELRQRALDGEDFADLAREYSEDIGS 329
Query: 229 VS-IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALK 285
G + + P F+ + ++ N T P+ +Q G + + D+RD +I +
Sbjct: 330 AQEGGDLGWASPGQMVPVFEEQMSNAELNAITEPFQSQFGWHILQVMDRRDQDVTQIVNR 389
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
K ++ +++++R A
Sbjct: 390 NRAQDYLHNQKYQEELEAWLQQIRDEA 416
>gi|188591256|ref|YP_001795856.1| peptidyl-prolyl cis-trans isomerase (ppiase), involved in
maturation of outer membrane proteins [Cupriavidus
taiwanensis LMG 19424]
gi|170938150|emb|CAP63136.1| peptidyl-prolyl cis-trans isomerase (PPIase), involved in
maturation of outer membrane proteins [Cupriavidus
taiwanensis LMG 19424]
Length = 489
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 97/297 (32%), Gaps = 26/297 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIE 91
+ +N VIT ++ R ++ Q G +L ++ L++E ++ Q +
Sbjct: 78 DEVVAVVNNSVITRRELLDRADEIESQLRAGGRPVPARADLLGEVLERLVMERVQTQAAQ 137
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----IWPDV 147
+GI V+ A+ ++A + ++ G+ ++ L Q +
Sbjct: 138 DAGIRVTDQEVDRAIESVAQQNQMNAAELRRRVEASGMTWTKYRDELRKQVQVIRLRERE 197
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V + + G ++ + A + EY + +L +P+N Q + +
Sbjct: 198 VDSKVQVYDGEIDNYLAARGGQGAAAGPTEYNMAQILVRVPENASDAQKQALRAKAEGLL 257
Query: 208 SRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265
+ + D +L + +S G + L F N ++ P V +
Sbjct: 258 KQAQDGADFAQLAQASSEGPEAAQGGAMGFREIGRLPALFANAVVDLQPGGV-APQVIES 316
Query: 266 --GVEYIAICDKRDLGGEI---------ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + KR ++ + P E + LR
Sbjct: 317 AAGFHVIKLVAKRAAPASGPAAAGKITQTQVRHILIRTGPNMPEAEARRQLGTLRDR 373
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+ + +R +L N + ++++ + + +F+ + G
Sbjct: 342 ITQTQVRHILIRTGPNMP--EAEARRQLGTLRDRITHGGDFADAARRFSQDGSAQNGGDL 399
Query: 235 QYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-SAQN 292
++ +L P+F+ + + N + P VTQ GV I + ++R+ + A+
Sbjct: 400 GWVSPGELVPEFEQAMSRLRPNEISEPVVTQFGVHLIQVLNRRETELSPEKQRDFARAEV 459
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHY 316
K+ ++V++LRS A + Y
Sbjct: 460 REQKLRAAYDDWVRQLRSQAYVEY 483
>gi|157374105|ref|YP_001472705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis
HAW-EB3]
gi|157316479|gb|ABV35577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis
HAW-EB3]
Length = 434
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 108/313 (34%), Gaps = 21/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + + + R+ IN ++ + +I +L+ K N
Sbjct: 1 MKPCKHFIFAFLTLAMSHTVLAKVEPLDRVAVQINEGIVLESEI---AGMLQTVKANASS 57
Query: 73 EKIAV-----------QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ A+ + LI+ L+ Q ++ G+ ++ A+ L+ +
Sbjct: 58 AEQALPSDQALRTQVIERLIMTRLQMQMADRIGLHIGDLQLDQTISNIAKEQNLTVDQMR 117
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYL 179
+ + ++G+ + +++ L + ++ + + EI + + + + E+
Sbjct: 118 AKIGEEGMSWSQYREQLREEITLGEIQRIQVQRRIQVSPQEINNLVKLIEEQGLQQVEFQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA-QYLL 238
I +L +P + + R++ D + AS G Y+
Sbjct: 178 IGHILIEVPSSPSSEALQKASERANTVLKRIQDGDDFRRTAIAASAGPKALEGGVWDYMN 237
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG---GEIALKAYLSAQNTP 294
+++ F +L ++ + P + G I + D R L + ++ + +P
Sbjct: 238 VNEMPTLFAEVLSGAKTGDVIGPIRSGAGFHIIKVLDARGLQTKEVDEVSSRHILIKPSP 297
Query: 295 TKIEKHEAEYVKK 307
E+ + K
Sbjct: 298 ILSEERAKAMLDK 310
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 4/156 (2%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + ++ V E R +L P L + K E+ R +++
Sbjct: 273 LDARGLQTKEVDEVSSRHILIK-PSPILSEERAKAMLDKFVEQVRAGDADFAALARQYSE 331
Query: 225 KI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G+ + S P F L + + P+ + G + + ++R
Sbjct: 332 DPGSGAKGGELGWADPSVYVPAFAQTLNALEIGEISEPFRSSHGWHIVQLEERRKTDATD 391
Query: 283 ALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++RS A I +
Sbjct: 392 KFNTNRAHQLIFRRKFNEELQNWLDEMRSEAYIEVF 427
>gi|237809111|ref|YP_002893551.1| SurA domain-containing protein [Tolumonas auensis DSM 9187]
gi|237501372|gb|ACQ93965.1| SurA domain protein [Tolumonas auensis DSM 9187]
Length = 436
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/313 (12%), Positives = 115/313 (36%), Gaps = 25/313 (7%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------E 71
+ + +P+ + + + +N +V+ ++ + + ++ +
Sbjct: 11 LLAGVLFALPLCTQAAQQSLDNVIAIVNKDVVVQSELDRLMHKVQADAAEQRQTLPPYHQ 70
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L K + LI ++L Q E+ G+ + ++ A LS D + +++G+
Sbjct: 71 LHKQILDRLIEDSLILQLAERQGLRIGDSQLDQALASIAAEKRLSVADMQAKAEREGLTP 130
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI-PANKQKMKNI-TVREYLIRTVLFSIPD 189
F++ + + + ++ +N + + E+ KQ + + + I +L S+
Sbjct: 131 AEFRETVRKEMMISEMRRNQLRQRINITDQEVKQLAKQISEQGNKGQRFHIEHILLSLSS 190
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN 248
+ + + +L+ D +++ S G ++ ++
Sbjct: 191 DADRGEQQRVAEKARQLLQQLKKGADFHQMAVAESADSKALDGGDWGWMTIEEMPSLMAE 250
Query: 249 LLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY----------LSAQNTPTKI 297
+ + ++ P + G+ I + +D+ G+ A++ S + K
Sbjct: 251 AISGAHKDQFIGPLRSGAGLHIIHV---KDMQGQQAIEMQEVNARHILLKTSVILSDEKA 307
Query: 298 EKHEAEYVKKLRS 310
E+ Y++ ++S
Sbjct: 308 EQMLKGYLRDIQS 320
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 55/156 (35%), Gaps = 6/156 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ Q + I ++E R +L + + + ++ +K KL + S
Sbjct: 276 KDMQGQQAIEMQEVNARHILLKT--SVILSDEKAEQMLKGYLRDIQSGKASFAKLAEKYS 333
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G+ + P+F+++ K + P+ T G + + +R+L
Sbjct: 334 DDTGSALKGGELGWANPEMYVPEFRDMTKNLPIGQLSQPFKTVHGWHIVQVEGRRNLANT 393
Query: 282 IALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHY 316
+ Q + + ++ +LR A I +
Sbjct: 394 PEALENRAYQLIYNRRFAEEAQTWIDELRDEAFIKF 429
>gi|212636811|ref|YP_002313336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
piezotolerans WP3]
gi|212558295|gb|ACJ30749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
piezotolerans WP3]
Length = 434
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/320 (15%), Positives = 115/320 (35%), Gaps = 23/320 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K ++ + V + + R+ IN +I + +++ + +K N
Sbjct: 1 MKRCNRLIFALLTLAMSQVVHAAVEPLDRVTVQINEGIILESEVAGMVKTIKANAANAGQ 60
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ LI+ L+ Q ++ G+ ++ A+ +S ED + +
Sbjct: 61 KLPSDTALRTQVIERLILTRLQMQMADRIGLHIGDLQLDQTIANIAKEQNISVEDMRAQI 120
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYL 179
+ G +++ L + ++ + + EI N+Q +K++ E+
Sbjct: 121 ESDGTSFAQYREQLREEVTLGEIQRIQVQRRIQVSPQEINNLVSLINEQGLKDV---EFQ 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLL 238
I +L +P + Q + D RL+ D +S + G Y+
Sbjct: 178 IGHILIDVPSDATSAQLEASSKRADVVLKRLKDGDDFRSIAIAASSGPKALEGGIWDYMN 237
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTP 294
+++ F ++ N+ P + G+ + I D R L E ++ + +P
Sbjct: 238 INEMPTLFAEVVNDAKVNDIIGPIKSGAGLHILKIMDARGLQTQEIEEVKSRHILLKPSP 297
Query: 295 TKIEKHEAEYVKKLRSNAII 314
E+ + R A I
Sbjct: 298 ILSEERAKGMMD--RFLAQI 315
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/154 (11%), Positives = 51/154 (33%), Gaps = 6/154 (3%)
Query: 168 QKMKNITVREYLIRTVLFSIPD--NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + E R +L ++ + +G + + + + + +
Sbjct: 276 RGLQTQEIEEVKSRHILLKPSPILSEERAKGMMDRFLAQIRSGEAKFEDIARQYSEDPGS 335
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
V G+ + + P F+ L + + P+ + G + + +R
Sbjct: 336 A--VKGGELGWADPNVWVPAFKQALNSLKKGEISEPFRSTHGWHIVQLEGRRTTDATEQF 393
Query: 285 KAYLSAQNTP-TKIEKHEAEYVKKLRSNAIIHYY 317
+ Q K + ++ ++R+ A I +
Sbjct: 394 NTNRAHQLIYRRKFNEELQNWLDEMRAEAFIDIF 427
>gi|33603075|ref|NP_890635.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
bronchiseptica RB50]
gi|81714068|sp|Q7WG19|SURA_BORBR RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|33568706|emb|CAE34464.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
bronchiseptica RB50]
Length = 519
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 89/282 (31%), Gaps = 35/282 (12%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKIN------GELEKIAVQEL 80
P S I +N +VIT ++ + L LQK L+K +Q L
Sbjct: 44 PATPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRL 103
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I+E L++QE ++ GI D V+ A ++ + ++K G+ +++ L
Sbjct: 104 IMERLERQEADRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD 163
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177
+ + + E+ A + +
Sbjct: 164 DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSGP 223
Query: 178 --YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L +P+ +Q ++ + +R + D L S + G
Sbjct: 224 AMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGGMM 283
Query: 236 YLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
D P + S + + G + + D+
Sbjct: 284 GARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDR 325
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 11/161 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E P+ + V + R +L + + ++R+ E+ R RL K E
Sbjct: 350 QEGPSVAAPQGPVRVTQTHARHILIKT--STVMTDDQARQRL---EQIRERLQGGAVKFE 404
Query: 221 KFASKIHDVS----IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275
A + S G ++ D P F+ + N + P ++ G I + ++
Sbjct: 405 DMARQYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPVLSPFGWHLIQVLER 464
Query: 276 RDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R+ + + + +++++LRS A I
Sbjct: 465 REHDVSDEVQRMRARQLLFERRAVPAFEDWLEQLRSQAFID 505
>gi|33594222|ref|NP_881866.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis
Tohama I]
gi|81713229|sp|Q7VU12|SURA_BORPE RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|33564297|emb|CAE43595.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis
Tohama I]
gi|332383636|gb|AEE68483.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis
CS]
Length = 519
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 89/282 (31%), Gaps = 35/282 (12%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKIN------GELEKIAVQEL 80
P S I +N +VIT ++ + L LQK L+K +Q L
Sbjct: 44 PATPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRL 103
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I+E L++QE ++ GI D V+ A ++ + ++K G+ +++ L
Sbjct: 104 IMERLERQEADRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD 163
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177
+ + + E+ A + +
Sbjct: 164 DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSGP 223
Query: 178 --YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L +P+ +Q ++ + +R + D L S + G
Sbjct: 224 AMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGGMM 283
Query: 236 YLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
D P + S + + G + + D+
Sbjct: 284 GARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDR 325
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 11/161 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E P+ + V + R +L + + ++R+ E+ R RL K E
Sbjct: 350 QEGPSVAAPQGPVRVTQTHARHILIKT--STVMTDDQARQRL---EQIRERLQGGAVKFE 404
Query: 221 KFASKIHDVS----IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275
A + S G ++ D P F+ + N + P ++ G I + ++
Sbjct: 405 DMARQYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPMLSPFGWHLIQVLER 464
Query: 276 RDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R+ + + + +++++LRS A I
Sbjct: 465 REHDVSDEVQRMRARQLLFERRAVPAFEDWLEQLRSQAFID 505
>gi|269103549|ref|ZP_06156246.1| peptidyl-prolyl cis-trans isomerase SurA [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163447|gb|EEZ41943.1| peptidyl-prolyl cis-trans isomerase SurA [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 357
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/236 (14%), Positives = 85/236 (36%), Gaps = 7/236 (2%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
ETL+ Q+ ++ GI D + + Q A+ +S + L + GI F+ +
Sbjct: 2 ETLQVQQAKQMGIRIDDSQLEQAIGQIAKERNMSIDQLRQQLAQYGISFADFRDQIRRDL 61
Query: 143 IWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + E+E A + + EY I + + ++ + + K
Sbjct: 62 MASEARTAIVRRRINILPQEVENLAQQLGQQTQQNTEYNISQIQIRVDESASKAERDAAK 121
Query: 201 RIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTT 258
D L D KL ++ + G+ ++ + ++ F + +K +
Sbjct: 122 EEADKLVKDLNDGADFAKLAYTYSKGPKALKGGEWGWMSKEEMPTIFADQIKNNGKGAII 181
Query: 259 NPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P+ + G + I D + + ++ + + + + ++++R
Sbjct: 182 GPFRSGVGYHILKINDVKGLQTVSVMEVKARHILLKPSVILSDAGAKQELEQVRQK 237
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ ++V E R +L + + + ++ ++ + L + + K S+
Sbjct: 200 GLQTVSVMEVKARHILLK--PSVILSDAGAKQELEQVRQKILSGKETFAQAAKAISQDPG 257
Query: 229 --VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIAL 284
+ G+ + P F++ ++ + + P+ T G + + +R++ + AL
Sbjct: 258 SAANGGELGWQTPDLYVPAFKDKVETLPVDTISQPFKTVHGWHIVEVEGRRNVDRTDAAL 317
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K K + ++++LR++A I
Sbjct: 318 KNRAYRILFNRKFNEEAQTWLQELRASAYID 348
>gi|297569281|ref|YP_003690625.1| SurA domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925196|gb|ADH86006.1| SurA domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 326
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 106/298 (35%), Gaps = 22/298 (7%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQE--------LIVE 83
+ + R+ +NG++IT ++ +A + L+ + A QE +I +
Sbjct: 29 TATVIDRVVAEVNGQIITLSELEAEMATIGEDFLRGVPAGERAKARQEAQSQVLSGMIDQ 88
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L +++ ++ GI ++ Q + LS E+ L++ G ++Q L Q +
Sbjct: 89 ILVERQAQRRGIFVGEREIDAAMAQIMEDNRLSREELIRELERSGTTLEQYRQTLRTQIL 148
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKR 201
++ + + E I ++ ++ Y + + F+ D QN+ ++R
Sbjct: 149 QARLLNLEVRERIVIPENRIRRYYEEHYADGSQQQGYHLLQMGFA-WDGDDQNRAEAKQR 207
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
A + L + + S G + +L + + +L + T
Sbjct: 208 ATGARDRVLTGGSFRQLARELSDLPSATSGGDLGVFEQDELADEMRRHILAMTPGELTPI 267
Query: 261 YVTQKGVEYIAICD----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ + R ++ + +E++ +V LR + I
Sbjct: 268 MEIGGAYQFFKLLAGGGVSRPYED---MREEIREILYQQALEENFERWVSNLREDVQI 322
>gi|212711199|ref|ZP_03319327.1| hypothetical protein PROVALCAL_02271 [Providencia alcalifaciens DSM
30120]
gi|212686367|gb|EEB45895.1| hypothetical protein PROVALCAL_02271 [Providencia alcalifaciens DSM
30120]
Length = 451
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 101/283 (35%), Gaps = 17/283 (6%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+K T + ++F S + ++ +N V+ + D+ I +KL N
Sbjct: 11 IMKNWRTLILGLMFA--SSASLAAPQQMDKVAAVVNNGVVLESDVQNMINTVKLNARNAN 68
Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L + + L+++ + Q + I VN AR L+
Sbjct: 69 QQVPDDQTLRQQIIDRLVMDNIMLQMANQMQINIPEEAVNTTIADIARQNNLTLPQMEKR 128
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIR 181
L GI ++ + + + +V N+ + L E+ A +M + + +
Sbjct: 129 LTADGINIAKYRSEIRKEMLLAEVRNNEVRRRITILPQEVDALADQMDSQMNAQKGVNLS 188
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLES 240
+L +P+N Q + + D S L+ D KL +++ + G +
Sbjct: 189 HILIPLPENPTPEQLAKAESLVDKILSDLKKGSDFGKLAIAYSADPQALKGGNMGWSRLQ 248
Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+L F + LK + + P + G + + ++ G+
Sbjct: 249 ELPVVFSDELKNAKKGDIVGPIRSGVGFHILRV---NEVSGDT 288
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 55/153 (35%), Gaps = 6/153 (3%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ + I+V E R +L + + + ++++ + + K
Sbjct: 283 EVSGDTHQPISVTEVKARHILLK--SSPIMDDATARQKLTQLAQEIRNGRISFEEAAKEN 340
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG- 279
S+ + G+ + + P F++ L+K + + P + G I + D R +
Sbjct: 341 SEDPGSALKGGELGWNMPDVYDPAFRDALMKLKKGEISQPVPSSFGWHLIQLEDTRSVDK 400
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ A K K + ++++ R+ A
Sbjct: 401 TDAAKKDQAYRLLFNRKFNEEAQTWMQEQRAAA 433
>gi|212702600|ref|ZP_03310728.1| hypothetical protein DESPIG_00626 [Desulfovibrio piger ATCC 29098]
gi|212674041|gb|EEB34524.1| hypothetical protein DESPIG_00626 [Desulfovibrio piger ATCC 29098]
Length = 320
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/320 (15%), Positives = 120/320 (37%), Gaps = 31/320 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-- 73
L +LI+ + + A ++I +NG+VIT D+ ++ AL +L +
Sbjct: 9 LKKSALLILMAWLCLACTAQAAQLNKIAAVVNGQVITMFDL-QKAALPELGRARLNPNDP 67
Query: 74 ----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ + +I++ L +QE ++ IT + ++ + + ++ F +
Sbjct: 68 KQADKVNVVFRKVLDSMIMDILLEQEAKRLSITASDSEIDQELTKMMKMRRMNRAQFEAE 127
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIR 181
L KQG+ + ++ + + V+ + + + EI A +K K+ +
Sbjct: 128 LKKQGMSVDELRKTMKTNMLRQRVMGAEVGRRVVVTDDEIRAYYEKHKDTMYDRNGLHMG 187
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
++++ N + EE+ K++ + G +
Sbjct: 188 LIVYNPNVNARSIAAQIASGSLSFEEA----------ARKYSIAPNREKGGDMGPVEWGR 237
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-----LKAYLSAQNTPT 295
L+P++++ L+K + T+ + Q + + G + +
Sbjct: 238 LNPEWESRLEKMKPGDVTDIFTVQGHKAQVHLFRPGQSGPGRPMTFEEARPVIDNILRQP 297
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
K + EY ++LR+ A+I
Sbjct: 298 KAMERFDEYSQQLRNKAVID 317
>gi|224369907|ref|YP_002604071.1| PpiD2 [Desulfobacterium autotrophicum HRM2]
gi|223692624|gb|ACN15907.1| PpiD2 [Desulfobacterium autotrophicum HRM2]
Length = 314
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/320 (13%), Positives = 118/320 (36%), Gaps = 28/320 (8%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQK 67
+ + + +F + + + RI +N ++IT +++ + +
Sbjct: 2 ITRKINFGLAIGVFTLFTLCGNVYAEIVDRIVAIVNEDIITLTELNTALRPYIDKIDSAG 61
Query: 68 INGELEKIAV--------QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
G+ ++ + ++ L QE++K IT ++ + + ++ ED
Sbjct: 62 YTGDKKEKILFKLRTDMLSRMVDRKLTDQEVKKFNITVTDKEIDAAIERLKQAQLMTQED 121
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVRE 177
+ L+K G+ +++ + ++ + P ++ K + +I A + + + VR+
Sbjct: 122 LETALEKDGMTFADYREKMRLEIMRPKLINYSVKSKVIVTDKDIAAYYAEHQAEYAGVRK 181
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
+ + +L + V R++ E+ + + + + G
Sbjct: 182 FRLSNILV----SDESTAETVWNRLETGEDFK-------ALAGELSKAPNAAEGGALGSF 230
Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTP 294
L Q + + K TN T +G + + + + G +K + +
Sbjct: 231 ALDTLSDQLKVAIGKLEPGQYTNVIPTDQGFQIFFLDEIVESKGNALDEVKDEIQKKLYD 290
Query: 295 TKIEKHEAEYVKKLRSNAII 314
+ +EK +++ LR ++I
Sbjct: 291 SIVEKKFNSWLESLREKSLI 310
>gi|33598180|ref|NP_885823.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
parapertussis 12822]
gi|81713639|sp|Q7W4J5|SURA_BORPA RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|33566738|emb|CAE38950.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
parapertussis]
Length = 519
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 90/282 (31%), Gaps = 35/282 (12%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKIN------GELEKIAVQEL 80
P S I +N +VIT ++ + L LQK L+K +Q L
Sbjct: 44 PATPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRL 103
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I+E L++QE+++ GI D V+ A ++ + ++K G+ +++ L
Sbjct: 104 IMERLERQEVDRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD 163
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177
+ + + E+ A + +
Sbjct: 164 DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSGP 223
Query: 178 --YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L +P+ +Q ++ + +R + D L S + G
Sbjct: 224 AMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGGMM 283
Query: 236 YLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
D P + S + + G + + D+
Sbjct: 284 GARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDR 325
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 11/161 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E P+ + V + R +L + + ++R+ E+ R RL K E
Sbjct: 350 QEGPSVAAPQGPVRVTQTHARHILIKT--STVMTDDQARQRL---EQIRERLQGGAVKFE 404
Query: 221 KFASKIHDVS----IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275
A + S G ++ D P F+ + N + P ++ G I + ++
Sbjct: 405 DMARQYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPVLSPFGWHLIQVLER 464
Query: 276 RDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R+ + + + +++++LRS A I
Sbjct: 465 REHDVSDEVQRMRARQLLFERRAVPAFEDWLEQLRSQAFID 505
>gi|291326505|ref|ZP_06124797.2| peptidylprolyl cis-trans isomerase SurA [Providencia rettgeri DSM
1131]
gi|291313964|gb|EFE54417.1| peptidylprolyl cis-trans isomerase SurA [Providencia rettgeri DSM
1131]
Length = 460
Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 49/319 (15%), Positives = 117/319 (36%), Gaps = 22/319 (6%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING- 70
+K T + ++F + + ++ +N V+ + D+ I +KL N
Sbjct: 21 IMKNWRTLILGLMFA--SSTALAAPQQMDKVAAVVNNGVVLESDVQNMINTVKLNAQNAR 78
Query: 71 -------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L ++ L+++ + Q + I V+ AR GL+ +
Sbjct: 79 QQVPDDQTLRHQILERLVMDNIILQMASQMQINIPDEAVDATITDIARQNGLTLQQMQQR 138
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIR 181
L GI N ++ + + + +V N+ + L E+ + ++M + E +
Sbjct: 139 LTADGINMNQYRSEIRKEMLIAEVRNNEVRRRVTILPQEVDSLAEQMSSQANYEMGVNLS 198
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLES 240
+L + +N Q Q + + D + L+ D KL +++ + G +
Sbjct: 199 HILIPLAENPTQEQLKTAEALVDKILAELKKGGDFGKLAIAYSADPQALKGGNMGWSRLQ 258
Query: 241 DLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPT 295
+L F LK + + P + G + + D + + ++ +++P
Sbjct: 259 ELPVVFAEQLKNAKKGDVVGPIRSGVGYHILRVNDVSGGSQPISVTEVKARHILIKSSPI 318
Query: 296 KIEKHEAEYV----KKLRS 310
+ + + +++RS
Sbjct: 319 MDDAQARQKLTKIAQEIRS 337
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/349 (13%), Positives = 106/349 (30%), Gaps = 78/349 (22%)
Query: 35 SWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKINGEL----------EKIAVQELIV 82
M+S+++ I E + T DI+ R L LQ++ L +E+++
Sbjct: 101 ILQMASQMQINIPDEAVDATITDIA-RQNGLTLQQMQQRLTADGINMNQYRSEIRKEMLI 159
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-----------------SAEDFSSF-- 123
++ E+ + +T V+ Q + + E +
Sbjct: 160 AEVRNNEVRRR-VTILPQEVDSLAEQMSSQANYEMGVNLSHILIPLAENPTQEQLKTAEA 218
Query: 124 --------LDKQG----------IGDNHFKQYLAIQSIWPDV------------------ 147
L K G K W +
Sbjct: 219 LVDKILAELKKGGDFGKLAIAYSADPQALKG---GNMGWSRLQELPVVFAEQLKNAKKGD 275
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G + + + I+V E R +L I + + + ++++ +
Sbjct: 276 VVGPIRSGVGYHILRVNDVSGGSQPISVTEVKARHIL--IKSSPIMDDAQARQKLTKIAQ 333
Query: 208 SRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
K S+ + G+ + + P F++ L++ ++ + P +
Sbjct: 334 EIRSGKISFEDAAKENSEDPGSALKGGELGWNMPDIYDPAFRDALMRLNKGELSQPVQSN 393
Query: 265 KGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
G I + D R++ + A K K + ++++ R++A
Sbjct: 394 FGWHLIQLEDTRNVDKTDAAQKDQAYRLLFNRKFNEEAQSWMQEQRASA 442
>gi|301061946|ref|ZP_07202675.1| SurA N-terminal domain protein [delta proteobacterium NaphS2]
gi|300443963|gb|EFK07999.1| SurA N-terminal domain protein [delta proteobacterium NaphS2]
Length = 316
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 108/313 (34%), Gaps = 19/313 (6%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----------GE 71
+ I+ + +S +NG+VIT ++ + + K Q +
Sbjct: 1 MFSLAILSWPASAEEKPASEKVAVVNGDVITRANLDRAMDFAKRQSMQQGKPLDEEQLAA 60
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+K + +LI L Q +K+G D V+ F Q + + E +++ + +
Sbjct: 61 LKKETLDKLIGIELLYQASKKAGNKVDEKQVDEKFAQFKKRFP-NEEALQKTMEEWHVTE 119
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSI-P 188
K L + V +F+ K E E+ A + + +L + P
Sbjct: 120 ADMKAELKKGMVTEAFVMKNFVDKTTIPEEEVKAYYDSHPQFFKQPEQVKASHILIKVKP 179
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
D + K+I+ A++ L + + G Y + F++
Sbjct: 180 DATEAEKAEAMKKIEKAQDKLLEGEDFAEVAKTTSEGPSASKGGDLGYFGRGQMVKPFED 239
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ ++ TQ G I + DK+ + E + +++K +Y
Sbjct: 240 VAFSLEPGKVSDVVKTQFGYHLIKVVDKKPETTIPLETVKPR-IEQFLKQQEVQKEIKKY 298
Query: 305 VKKLRSNAIIHYY 317
+ LR A + +
Sbjct: 299 IDNLRKGAKVEIF 311
>gi|94264357|ref|ZP_01288149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta
proteobacterium MLMS-1]
gi|93455251|gb|EAT05464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta
proteobacterium MLMS-1]
Length = 335
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 113/295 (38%), Gaps = 21/295 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK---LQKIN--------GELEKIAVQELIVETLKKQ 88
R+ +NGE+IT ++ + +A ++ LQ+ E + + +I L +Q
Sbjct: 38 DRVVAEVNGEIITMSELEREMAGVEQQVLQQAPAADREQVLAEARQQVLSGMIDRLLARQ 97
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV- 147
+ ++ GI V+ Q + ++ E+ + + + ++++ L Q + +
Sbjct: 98 QADRLGIRVGEREVDEAIAQILADNRITMEELEAEIARHHGSMENYRRDLQTQILQSRLL 157
Query: 148 ---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
V+ ++ ++ + Q+ + Y I + F+ P + + +++ ++
Sbjct: 158 SLEVRERVVIPERRIKEYYQQHHQEQTSPEEA-YHILQIGFNWPPGDDEAREQARRQAEE 216
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP-QFQNLLKKSQNNTTNPYVT 263
+ +++ + G + +L +++ + + T
Sbjct: 217 IHRQARQGADFRELARRYSDLPSARNDGDLGVFQKDELAGIMLEHIPELEPGEISTILET 276
Query: 264 QKGVEYIAICD----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G ++ + R G LK + + +E+ +++VK+LR NA I
Sbjct: 277 AAGYQFFKLLSNQGELRATGSYEELKGKIREKLYQQALEEQFSKWVKELRENAYI 331
>gi|296271661|ref|YP_003654292.1| SurA domain-containing protein [Arcobacter nitrofigilis DSM 7299]
gi|296095836|gb|ADG91786.1| SurA domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 283
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 55/305 (18%), Positives = 116/305 (38%), Gaps = 33/305 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K + + ++F ++ ++ + M + T+N E IT DI++++A L+K +
Sbjct: 4 KQIKLFAKRVLFTLMATFTFSNAQMIDALALTVNDEPITTSDINQKMAETHLKKAD---- 59
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
AV ELI + L KQE+EK IT D VN + + A + G+ F S L ++ +
Sbjct: 60 --AVSELIDQILYKQELEKQNITVDIFEVNDYLEKLAASNGMDLYTFKSILRQKNKNFDE 117
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F+ + ++ ++ A + E ++
Sbjct: 118 FEAQTKKEL----------------MKKKLAAKLIRGNIPVATEEDLKIYY------DNN 155
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
F + + + + + + + + + K L + L+PQ + LL +
Sbjct: 156 KSMFTTASKINVTQYASKNKRSLIIMSQNPMALLNDVVKKDFTLEQDKLNPQLKFLLNDT 215
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + T + + + K + + + +A + +K EY +KL+
Sbjct: 216 KDGSFTPIFTADRTFVMFFVKSKSGVTTLKFDEVKEKIFNA-LMGEREQKFLKEYFEKLK 274
Query: 310 SNAII 314
A I
Sbjct: 275 LTADI 279
>gi|86160750|ref|YP_467535.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777261|gb|ABC84098.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 338
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 101/294 (34%), Gaps = 18/294 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALL------------KLQKINGELEKIAVQELIVETLKK 87
R+ +NG+V+T ++ +R A L + + E + A +++ + L
Sbjct: 37 DRVAAIVNGDVVTLQELEQRAAALGLAAADALPAGPERDRARAEALRRAFDQVVSDKLFA 96
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
++ ++ I V+ + G + S L +G ++ + + +
Sbjct: 97 EKAKELEIEVTEKQVDDAIEGVKKQNGFTDAQLESALASEGYSMADYRTRIRRELQNFSL 156
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ K E ++ Q E +R + P+ + +
Sbjct: 157 LQYKVAGKIKTSEEDLRNYYQSHPQEFDGEDEVRVRHIFIPFPEGGGKQAQAQARAEGQR 216
Query: 206 EESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVT 263
RL+ +D + + G+ +L +H ++ +
Sbjct: 217 VLQRLKTGEDFGAVAKAVSRGPSAEEGGELGWLKRGTIHRTLEDAAFALKTGEISGLVEA 276
Query: 264 QKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
GV + + ++R GG+ + + + + E + +YV +LR +A+I
Sbjct: 277 GPGVHILKVEERRRGGGKSFEQAREEIRQRLGEEQAENYRQQYVAELRRDALID 330
>gi|317402408|gb|EFV82980.1| chaperone surA [Achromobacter xylosoxidans C54]
Length = 517
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 92/284 (32%), Gaps = 37/284 (13%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIA-LLKLQKIN----GELEKIAVQEL 80
I ++ +VIT ++ +RIA LK + I L+ +Q L
Sbjct: 42 SAPPAAGEQFVDGIAAVVDKDVITLRELRDASQRIAGELKARGIQVPDDKTLQHQVLQRL 101
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I+E +++ E ++ GI D V+ A ++ ++K G+ + +++ L
Sbjct: 102 IMERVQRHEADRLGIRVDDAQVDQAIATIAGRNKITVAQLRQEIEKSGVNWDSYRKSLKD 161
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----------------------- 177
+ + + + E+ A + +
Sbjct: 162 EIRSDRLRQRAVDSNIVISDAEVDAFLKDQRRNPAFAAAPQQAQPQPQPEAAPEQAAAPA 221
Query: 178 ----YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
Y + +L +P+ Q ++ + +R++ D L +S + G
Sbjct: 222 GPMLYAVAQILVRVPEGSSPEQLAALRKKAEDLLARVKRGDDFASLAAASSDGPEALQGG 281
Query: 234 AQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ D P + + + + + G + + D+
Sbjct: 282 VMGVRPLDGWPDLFAKAIANLQKGQISGLLQSGNGFHILKVMDR 325
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 50/146 (34%), Gaps = 5/146 (3%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSI 231
+ V + R +L + + + ++R++ + + + +++
Sbjct: 360 VEVMQTHARHILIKT--STVMSDEQARQRLEQVRQRLVAGDAKFDDMARQYSQDATAPQG 417
Query: 232 GKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLS 289
G +L + P F+ + + P T G I + ++R + +
Sbjct: 418 GDLGWLNPGETVPPFEAAMNALKPGEISQPIQTPFGWHLIQVEERRQHDATDDLARMKAR 477
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +++ +LR+ A I
Sbjct: 478 QTLFERRAQPAFEDWLDQLRAQAYID 503
>gi|95930006|ref|ZP_01312746.1| PPIC-type PPIASE domain protein [Desulfuromonas acetoxidans DSM
684]
gi|95133975|gb|EAT15634.1| PPIC-type PPIASE domain protein [Desulfuromonas acetoxidans DSM
684]
Length = 303
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 102/301 (33%), Gaps = 12/301 (3%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ V I+ S+I +N E+IT + +R+ + ++
Sbjct: 1 MLKKIVFTALLFSLIIPSVWAEQLSKIAAVVNDEIITTRQLEQRLVSRGERSATDAQKRQ 60
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +I E L +Q + G+ + + + +S E L QG+ + ++
Sbjct: 61 ELDNMINERLMEQRSREIGLEVSDDDIETAINDVQQQNNISREQLEQALIAQGLSMSGYR 120
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L Q + ++ + K E+ Q+ + + +R + P
Sbjct: 121 EQLRGQILRYKLMGYEVKSKVDITRQEVRNYYQEHLDQYRQSPRVRLSRLTFPLGDDPTA 180
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQNLL-K 251
++ LR D +++ + + G+ + +L F+ +
Sbjct: 181 A------RENATIALRKLDDGESVDEVLVNMSPRTRIEGGEMGSFVAGELSETFEQAIAD 234
Query: 252 KSQNNTTNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ T + + + ++ + ++ + + + K+++ E+ + LR
Sbjct: 235 LDSGDHTPLIPLGDALHILKVEERIPGSVADISTVEEQIRGELSQQKMDQKLQEWRENLR 294
Query: 310 S 310
S
Sbjct: 295 S 295
>gi|78357080|ref|YP_388529.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78219485|gb|ABB38834.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 329
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 111/308 (36%), Gaps = 24/308 (7%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------------G 70
+ V + + + ++I +NGE+IT D+ R A KL +
Sbjct: 28 VSALAVFVAGAGAETVINKIVAVVNGEIITQYDLQARAA-SKLHRAGLSALDPADAAAIK 86
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++E ++++IV+ L QE E+ + D V+ ++ + + L +G
Sbjct: 87 KIESETLEDMIVDRLMVQEAERYNLGADDAAVDNELRSLLARMQITEDQLVAQLKSEGQD 146
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ ++ + + ++ K +I A ++ KN +++ I L
Sbjct: 147 LDFYRGLIRNNIMRQKLLSFMVSRKVVVTRQDIEAYYEEHKNEYMQDKSISLSLLVFAPT 206
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
R + + + ++K++ S G L S L Q++ L
Sbjct: 207 ADPEPVLRDIREGNISFA--------DAVKKYSVGPAASSGGAIGKLDWSSLVSQWKQAL 258
Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKK 307
+ + + P Y+ + + + + + A+ +++ EY +K
Sbjct: 259 EGVAAGGLSRPIEYDGRAAYLHVDEVIEGTVRPVDEVADEIEAKLREPMLKERFEEYTRK 318
Query: 308 LRSNAIIH 315
LR A++
Sbjct: 319 LRERAVVD 326
>gi|298370562|ref|ZP_06981877.1| SurA/PPIASE domain protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281172|gb|EFI22662.1| SurA/PPIASE domain protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 304
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/318 (12%), Positives = 106/318 (33%), Gaps = 32/318 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + V S I ++ +VIT ++++ +A + + G
Sbjct: 3 FKPLILAAALGLTLNVHAADVKFSDGIAAVVDNDVITQREVAQAVAAARSRLPKGSQISN 62
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
EL + + +L+ ++L Q ++ I ++ Q+
Sbjct: 63 DELRQQVLSQLVNQSLIIQAGKRKKIQASEAEIDAVLAQNPTQAK--------------K 108
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP-----ANKQKMKNITV---REYLIR 181
+ ++ +A + V + M + E+ A +Q + R+Y +
Sbjct: 109 ANKAVRRQIADSIVVEKVRQQAIMQNSRVSDAEVDRFLAQAQRQGITLPAGEPLRQYKAQ 168
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+L + + R A+ +++ + G + +
Sbjct: 169 HILLKADSDNAVSAAESSIRKIYAQARSG--TDFSALARQYSQDTSAGNGGDLGWFSDGQ 226
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEK 299
+ F++ + K + P TQ G I + + RD G E + + + K ++
Sbjct: 227 MVAPFEDAVHKLKPGQVSPPVRTQFGWHIIKLNEVRDAGTPEERQRNAVRQYISNQKAQQ 286
Query: 300 HEAEYVKKLRSNAIIHYY 317
+++L S++ ++ +
Sbjct: 287 ATTNLLQELHSSSYVNVH 304
>gi|213022578|ref|ZP_03337025.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
Length = 335
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 4/181 (2%)
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
++ A+ ++ + S L G+ + ++ + + I +V N+ + L
Sbjct: 1 EQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYSTYRNQIRKEMIISEVRNNEVRRRITVL 60
Query: 160 EMEIPA-NKQ-KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E+ A KQ +N E + +L ++P+N Q +R ++ R D
Sbjct: 61 PQEVDALAKQIGTQNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEARNGADFG 120
Query: 218 KLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275
KL S G+ + +L F L + + P + G + + D
Sbjct: 121 KLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDL 180
Query: 276 R 276
R
Sbjct: 181 R 181
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 95/317 (29%), Gaps = 61/317 (19%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
T + R+A L +E+I+ ++ E+ + IT V+ Q
Sbjct: 17 TMDQMRSRLAYDGL--NYSTYRNQIRKEMIISEVRNNEVRRR-ITVLPQEVDALAKQIGT 73
Query: 112 NT-----------------GLSAEDFSSFLDKQ----------------GIGDNHFKQYL 138
++E + + I + +Q L
Sbjct: 74 QNDASTELNLSHILIALPENPTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQAL 133
Query: 139 AI-QSIWPDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
Q W + + G +++ + + ++I+V E
Sbjct: 134 KGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVH 193
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
R +L + + N + ++++ K S+ + G +
Sbjct: 194 ARHILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWA 251
Query: 238 LESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPT 295
P F++ L K + + P + G I + D R + A + + +
Sbjct: 252 TPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNR 311
Query: 296 KIEKHEAEYVKKLRSNA 312
K + A ++++ R++A
Sbjct: 312 KFSEEAATWMQEQRASA 328
>gi|294084202|ref|YP_003550960.1| SurA domain-containing protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663775|gb|ADE38876.1| SurA domain protein [Candidatus Puniceispirillum marinum IMCC1322]
Length = 424
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 111/295 (37%), Gaps = 31/295 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK------ 64
++ TT +LI + ++ + + +I ++G+ IT+ D+ +R+ LK
Sbjct: 5 SLFRIFTTSIMLIGMMALGGLNASA---NIKIVAKVDGKPITNYDVDQRVLFLKAVTNLP 61
Query: 65 -LQKINGELEKIAVQELIVETLKKQEI-------EKSGITFDSNTVNYFFVQHARNTGLS 116
+ I ++ K A+Q L+ +TLK Q ++ ++ ++ F + +
Sbjct: 62 ETENIEKQIRKDALQMLVDDTLKMQAALSTNPLVQQQANRPATDLIDQSFASDSESG--- 118
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITV 175
S+ L + + + K A IW +++ F + ++ +I ++ + +
Sbjct: 119 ----SAALRRLNLNYDAVKTKFAADLIWSGYLQDKFADIFAEIDGKIDLELERIRADASQ 174
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKA 234
+ I ++ + N+ + ++ D N + + S G+
Sbjct: 175 PQVNISEIVLAPEPNRPLAATMA---LATEMVKAVKKGADFNAIAQQYSAAGTAQQGGRL 231
Query: 235 QYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAIC-DKRDLGGEIALKAY 287
++L L + Q ++ ++P V D++D +I+
Sbjct: 232 GWVLLERLPEKLQAMIAPLDVGGVSDPIQLDGAVYIFKKTGDRKDGANDISQSRI 286
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 3/154 (1%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP--KDCNKLEKFA 223
K + + + + + R++ A + + DC+ +
Sbjct: 269 KKTGDRKDGANDISQSRIWLVRAVLPVNAEATKSDRLEAAAQLGRDVTDINDCDSMVALH 328
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ + + + L +L PQ QNL+K+ + +GV +C + +
Sbjct: 329 EEYGSGTAPRLEDLRLGELAPQMQNLVKELNVGEPSEALSFSEGVASFMVCKRLKPELNL 388
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + Y+ +LR A I +
Sbjct: 389 PTRDDIYRVQFNRLFGSLSERYLLRLRRKASIEF 422
>gi|254498443|ref|ZP_05111173.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella
drancourtii LLAP12]
gi|254352330|gb|EET11135.1| peptidyl-prolyl cis-trans isomerase D (SurA) [Legionella
drancourtii LLAP12]
Length = 421
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 96/263 (36%), Gaps = 14/263 (5%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQ 78
+ + ++ + ++ +N VIT ++ K++A+ K Q + + K +Q
Sbjct: 2 LAAVGVTQAKQLLDKVVAVVNNSVITASELDKQVAMAKKQLLAQRIQLPPDSVVRKQVLQ 61
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI L+ Q ++ GI+ D + + A + + KQG+G N +++ +
Sbjct: 62 HLIDVDLQLQMAKQHGISVDDTELTQAIERIAAANHATLSQMREEIVKQGMGWNEYRENI 121
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE----YLIRTVLFSIPDNKLQN 194
+ I ++ + ++ + ++ V Y ++ ++ + D
Sbjct: 122 RKEMILSNLQQKAVGHDVMITNEQVEQYLKTEGDLPVDRTHLTYHLQNIVIPLNDEPTPA 181
Query: 195 QGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252
Q + I ++ D N+ + ++ + G ++L F + ++
Sbjct: 182 QMKKAQAIAAQILISIKKGADFNRVAVEKSTGDFALDSGDLGERHLAELPELFAKEVVNM 241
Query: 253 SQNNTTNPYVTQKGVEYIAICDK 275
P G++ I +
Sbjct: 242 KVGQVAGPLRAGNGLQLIKLVAI 264
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 7/169 (4%)
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V G +++ A + + V +R +L N L V+K++ + +
Sbjct: 246 VAGPLRAGNGLQLIKLVAIGGEQQQHMVTLTHVRHILLKPDANMLPED--VKKQVNNIYQ 303
Query: 208 SRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
+L+ KD K+ K S ++ G ++ +L P+F+ + K N + P TQ
Sbjct: 304 -QLKAGKDFAKMAKQYSLDPGSAVKGGDLGWVTPGELVPEFEKTMNKLALNQVSQPVKTQ 362
Query: 265 KGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
G I + ++ A K + K + + + +R++A
Sbjct: 363 FGWHLIEVLGRKQQDDSTAFKKQQIRQFLHQRKFAEAVQNWQQHIRTDA 411
>gi|220932946|ref|YP_002509854.1| peptidil-prolyl cis-trans isomerase [Halothermothrix orenii H 168]
gi|219994256|gb|ACL70859.1| peptidil-prolyl cis-trans isomerase [Halothermothrix orenii H 168]
Length = 332
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/342 (16%), Positives = 119/342 (34%), Gaps = 51/342 (14%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----RIALLKLQ 66
F + + + L++ +++ + I ++G+ IT ++ + R +++L
Sbjct: 2 RFRRSVFLFLALVLVISFSVLAEDKVEKTDNIAAVVDGKEITISEVDEYARTRDVIMQLY 61
Query: 67 KINGELEK-----IAVQELIVE--TLK----------KQEIEKSGITFDSNTVNYFFVQ- 108
+ NGE + A ELI E LK +E + GI ++ F +
Sbjct: 62 QANGEFTQLILSTEAGNELINEYRKLKLDELITRELLIKEAKNQGINVSKEEMDKIFNEQ 121
Query: 109 ---HARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSI-------WPDVVKNDFMLKYG 157
+ ++ E L++QGI + +K Q+ + V D ++
Sbjct: 122 IEMVKQKNNINEEQLLQALNQQGIESLDQYKNLFFEQNGDLLLINKLREKVMEDVSVEES 181
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ NK+ K+ T + R +L +K ++
Sbjct: 182 AVREYYDNNKENFKHGT--QIKARHILV-----------ETEKEAREILNELENGADFGE 228
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+++++ + G Y + + P+F+ ++P TQ G I + DK
Sbjct: 229 MAKEYSTGPSSKNGGDLGYFGKGRMVPEFEEAAFALKVGQISDPVKTQYGYHIIKVEDKV 288
Query: 277 D---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + K + ++K+LR A I
Sbjct: 289 EEGITPFDEVKDK-IKNNLLQQKQQTAWNNFLKELRDKAEIE 329
>gi|294671290|ref|ZP_06736142.1| hypothetical protein NEIELOOT_02999 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307017|gb|EFE48260.1| hypothetical protein NEIELOOT_02999 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 320
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 102/314 (32%), Gaps = 17/314 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K ++ C S + VIT + +A +
Sbjct: 1 MKPQKILTAALLACFFQTASAADIKTVDGVAAVAGDSVITMRQFEQAVAQARRLPAAQRP 60
Query: 71 ---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
EL + + +LI ++L Q ++ G+ V+ A +S + + K
Sbjct: 61 PENELRQQVLAQLINQSLIVQAGKRRGLAATQAEVDEAVAHAAAEQKISVDQLYARAAKD 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--------REYL 179
G+ ++ A + V + + E E+ A + + V R+Y
Sbjct: 121 GLSKAALRRQTADALVAQKVQQQAILQNARVSEAEVDAALARAQQQGVAIPEGKAPRQYR 180
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ +L + I + +++ G + +
Sbjct: 181 AQHILIKAEKENAV--AAAETVINKIRAQAEKGRDFGELARQYSQDGSAPQGGDLGWFGD 238
Query: 240 SDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKI 297
+ P+F++ ++K + + P TQ G I + D R++G E + + K
Sbjct: 239 GMMVPEFESAVQKLKKGQVSRPVRTQFGWHLIKLNDVREVGTPEERRRNTIRQYIMQQKA 298
Query: 298 EKHEAEYVKKLRSN 311
E+ + +++L +
Sbjct: 299 EQAAGQLLQQLHES 312
>gi|315648234|ref|ZP_07901335.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex
V453]
gi|315276880|gb|EFU40223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex
V453]
Length = 399
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/305 (18%), Positives = 111/305 (36%), Gaps = 28/305 (9%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I L LI+ IVP + S + +N IT K +L + G
Sbjct: 97 IASLVLAAALIVVLIVPPFAKGSGNEA---VAKVNDVKIT-----KDTLYNELVEAGG-- 146
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K V +I E L KQE+ K IT VN + S + F+ L + G+
Sbjct: 147 -KQTVNSMITEELIKQELAKQSITVTDAEVNEEVDALKASFP-SEDQFNMALQQSGMTLE 204
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
K Q ++ + +K + E++ ++ K T + +L +
Sbjct: 205 DLKGQTKTQVELKKLMGDK--IKVTDEEIKTIYDQNKESFATPEQVRASHILVETKEEA- 261
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
V++ A+ + + K+ + + + G + ++ P F+ K
Sbjct: 262 --DEIVKQLKDGADFAAIAKEKNQDATKD--------TGGDLDFFGRGEMDPAFEEAAFK 311
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLR 309
++ ++P + G I + D+++ K + Q K+ + + Y+++L+
Sbjct: 312 LKKDEISDPVKSSFGYHIIKLTDRKEATNPTLEDKKVEIRKQLENQKVYQESSAYIQELK 371
Query: 310 SNAII 314
A I
Sbjct: 372 DKATI 376
>gi|261408078|ref|YP_003244319.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
gi|261284541|gb|ACX66512.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
Length = 390
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 115/305 (37%), Gaps = 28/305 (9%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I L LI+ IVP + S + +N IT ++ +L + G
Sbjct: 88 IASLVLAAALIVVLIVPPFAKGSGNEA---IAKVNDVNITKDNL-----YDELVSVGG-- 137
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K + +I E L +QE++ IT VN + S E F+ L + G+ +
Sbjct: 138 -KQTLNSMITEELIQQELKNKSITVTDADVNKEVDALKASFP-SEEQFNMALQQNGMTLD 195
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ K+ Q ++ + +K + E++ ++ K T + +L +
Sbjct: 196 NLKEQTKTQVELKKLMADK--IKVTDEEVKEVYDQNKESFATPEQVRASHILVETKEEA- 252
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ V++ + A+ + + K+ + + + G + ++ P F+ K
Sbjct: 253 --EAIVKQLKEGADFATIAKEKNQDATKD--------TGGDLNFFGRGEMDPAFEEAAFK 302
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLR 309
++ + P + G I + D+++ K + +Q K+ Y+++L+
Sbjct: 303 LKKDEISEPVKSSFGYHIIKVTDRKEATNPTLEDKKEEIRSQLENQKVYAESTAYIQELK 362
Query: 310 SNAII 314
A I
Sbjct: 363 DKATI 367
>gi|58038776|ref|YP_190740.1| peptidyl-prolyl cis-trans isomerase [Gluconobacter oxydans 621H]
gi|58001190|gb|AAW60084.1| Peptidyl-prolyl cis-trans isomerase [Gluconobacter oxydans 621H]
Length = 387
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 8/211 (3%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ +LI E LK QEI K I + + + + G+ L G+
Sbjct: 25 RGQIIHQLIDERLKTQEILKLHINVEPDQIAGAISNIEQRNGMPKNALRDRLASDGVSLT 84
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSI--PD 189
+ +Q W V++ + +I +Q ++ +Y + + + P
Sbjct: 85 TLIDQIRVQIGWMQVLREKLGEEGRVTATQISQREQALQAEQGRPQYFMSEIFVPVADPR 144
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ F + I E P +F+ + G ++ E +L PQ N+
Sbjct: 145 HDENELAFTKTIISQLREG-APFPIV---AAQFSQAQSALDGGSMGWVQEDNLDPQVVNI 200
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
+++ +NP G + KR +G
Sbjct: 201 VRQMPIGAISNPIQVAGGFVIATVQSKRVVG 231
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 58/162 (35%), Gaps = 2/162 (1%)
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-RLRLPK 214
G + +K+ + +R F Q+R + + ++
Sbjct: 216 AGGFVIATVQSKRVVGKQMGTLLDLRQAFFPFDAPLNPQNPTEQQRAALQKATTAVQTVH 275
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273
C+ +E + + + L PQ + +L+ N + P V+ G+ + +C
Sbjct: 276 SCDAMEALNKSLGEKRPSNPGSQILERLMPQMKAVLEALPPNKVSRPLVSMDGIALLMVC 335
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+++ + ++ Q ++E+ + + L+ AII
Sbjct: 336 NRQQKNLAQQSPSEIADQLMNERVEQASRQLQRDLQRRAIIE 377
>gi|261344779|ref|ZP_05972423.1| hypothetical protein PROVRUST_06044 [Providencia rustigianii DSM
4541]
gi|282567224|gb|EFB72759.1| peptidylprolyl cis-trans isomerase SurA [Providencia rustigianii
DSM 4541]
Length = 440
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 98/272 (36%), Gaps = 14/272 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+K T + ++F S + ++ +N V+ + D+ I +KL N
Sbjct: 1 MKNWRTLILGLVFA--SSASLAAPQQMDKVAAVVNNGVVLESDVQNMINTVKLNARNSGQ 58
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L ++ L+++ + Q + + VN AR GL+ L
Sbjct: 59 QVPDDQTLRSQIIERLVMDNIMLQMANQMQLNIPEEAVNATIEDIARQNGLTLAQMEKRL 118
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRT 182
GI ++ + + + +V N+ + L E+ A +M + E +
Sbjct: 119 VADGINMAKYRSEIRKEMLLAEVRNNEVRRRITILPQEVDALSNQMDSQANAEMGVNLSH 178
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD 241
+L +P+N Q + + S L+ D KL +++ + G + +
Sbjct: 179 ILIPLPENPTPEQLATAEALVSKVLSELKKGSDFGKLAIAYSADPQALKGGNMGWSRLQE 238
Query: 242 LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAI 272
L F + LK S + + P + G + +
Sbjct: 239 LPVVFSDQLKSSKKGDIVGPIRSGVGFHILRV 270
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 56/151 (37%), Gaps = 6/151 (3%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + I+V E R +L + + + ++++ + + K S+
Sbjct: 274 SGGSQQPISVTEVKARHILLK--SSPIMDDTMARQKLTQLSQEIRNGKISFEEAAKENSE 331
Query: 226 IHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GE 281
+ G+ + + P F++ L+K + + P + G I + D R++ +
Sbjct: 332 DPGSALKGGELGWNMPDVYDPAFRDALMKLKKGEISQPVPSSFGWHLIQLEDTRNVDKTD 391
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
A K K + ++++ R+ A
Sbjct: 392 AAKKDQAYRLLFNRKFNEEAQTWMQEQRAAA 422
>gi|329119266|ref|ZP_08247953.1| sura/ppiase domain protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464613|gb|EGF10911.1| sura/ppiase domain protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 321
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 101/292 (34%), Gaps = 18/292 (6%)
Query: 40 SRIRTTINGEVITDGDIS-----KRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKS 93
I VIT + R ++ Q+ + L + + +L+ L Q ++
Sbjct: 29 DGIAAVAGDAVITVRQLDNAAAAARQSIPAAQRPSENELRRHILAQLVNRALVVQAGKRR 88
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
GIT + A + E+ + K GI ++ A I V + +
Sbjct: 89 GITASEAETDEALAHAAAQKHTTVENLYAQNAKNGISRATLRKDTAEGIIAEKVRQQAIL 148
Query: 154 LKYGNLEMEIPANKQKMKNITVR--------EYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ + E+ A ++ K + +Y R +L + R
Sbjct: 149 QQARVSDAEVDAAIERAKQQGITLPAGKPVRQYRARHILIKAEKDNALASAESVIRKIQN 208
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
+ R + ++++ G + + + P+F++ +KK + + P TQ
Sbjct: 209 QAKAGR--DFGDLAKQYSQDTSAAQGGDLGWFGDGVMVPEFEDAVKKLKKGQISRPVKTQ 266
Query: 265 KGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I + D R+ G E + + K E A+ +++L +A +
Sbjct: 267 FGWHLIQLTDTRESGTPEERQRNAVRQYIMQQKAEAASAQLLQQLHESAYVD 318
>gi|153007318|ref|YP_001381643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
gi|152030891|gb|ABS28659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
Length = 323
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 104/294 (35%), Gaps = 19/294 (6%)
Query: 40 SRIRTTINGEVITDGDISKRI--ALLKLQKINGELEKI---------AVQELIVETLKKQ 88
R+ +NGEV+T ++++R ALLK +++ E+ A +++ E L +
Sbjct: 23 DRVAALVNGEVVTLSELAERAGPALLKAEQLPAGAERESAQTAALKRAFDDVVAERLLQS 82
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ + + V+ R G L +QGI F+ + + V+
Sbjct: 83 KAAELQLEATEAQVDEAVEDIKRRNGFDDAALERALKEQGIDRATFRANVKREYDAFLVL 142
Query: 149 KNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ K + ++ Q E +R + +P+ + Q + +
Sbjct: 143 QYQVRSKVKVSDDDLRNYYQSHPQEFGGEDEVKVRHIFLPMPEGATKAQQAKVEDQMNRV 202
Query: 207 ESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264
RL+ +D + + G +L + ++ + P
Sbjct: 203 LQRLKTGEDFAAVAREVSKGPSAAEGGDLGWLRRGTIDKALEDTAFALQAGQLSQPVRAG 262
Query: 265 KGVEYIAICDKRDLGGEIA---LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G+ + ++R + GE + K + A + + + + +LR +A+I
Sbjct: 263 PGLHLFKV-EERRVAGEKSFEDAKEEIRAHLVDQQAGTYRQQLIAELRRDALIE 315
>gi|329923149|ref|ZP_08278648.1| putative foldase protein PrsA [Paenibacillus sp. HGF5]
gi|328941591|gb|EGG37877.1| putative foldase protein PrsA [Paenibacillus sp. HGF5]
Length = 398
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 111/305 (36%), Gaps = 28/305 (9%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I L LI+ IVP + S + +N IT ++ +L + G
Sbjct: 88 IASLVLAAALIVVLIVPPFAKGSGNEA---IAKVNDVNITKDNL-----YDELVSVGG-- 137
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K + +I E L +QE++ IT VN + S E F+ L + G+ +
Sbjct: 138 -KQTLNSMITEELIQQELKNKSITVTDADVNKEVDALKASFP-SEEQFNMALQQNGMTLD 195
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ K+ Q ++ + + ++ NK+ + +L +
Sbjct: 196 NLKEQTKTQVELKKLMADKIKVTGEEVKEVYDQNKESFATPE--QVRASHILVETKEEA- 252
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ V++ + A+ + + K+ + + + G + ++ P F+ K
Sbjct: 253 --EAIVKQLKEGADFATIAKEKNQDATKD--------TGGDLNFFGRGEMDPAFEEAAFK 302
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLR 309
++ + P + G I + D+++ K + +Q K+ Y+++L+
Sbjct: 303 LKKDEISEPVKSSFGYHIIKVTDRKEATNPTLEDKKEEIRSQLENQKVYAESTAYIQELK 362
Query: 310 SNAII 314
A I
Sbjct: 363 DKATI 367
>gi|94266120|ref|ZP_01289835.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta
proteobacterium MLMS-1]
gi|93453317|gb|EAT03757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta
proteobacterium MLMS-1]
Length = 335
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 113/294 (38%), Gaps = 19/294 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQE--------LIVETLKKQ 88
R+ +NGE+IT ++ + +A ++ LQ+ + A+ E +I L +Q
Sbjct: 38 DRVVAEVNGEIITMSELEREMAGVEQQVLQQAPAADREQALTEARQQVLSGMIDRLLARQ 97
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ ++ GI V+ Q + ++ E+ + + + ++++ L Q + ++
Sbjct: 98 QADRLGIRVGEREVDEAIAQILADNRITMEELEAEIARHHGSMENYRRDLQTQILQSRLL 157
Query: 149 KNDFMLKYGNLEMEI-PANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ + E I +Q + T E Y I + F+ P + + +++ ++
Sbjct: 158 SQEVRERVVIPERRIKEYYQQHHQEQTSPEEAYHILQIGFNWPPGDDEAREQARRQAEEI 217
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP-QFQNLLKKSQNNTTNPYVTQ 264
+ +++ + G + +L +++ + + T
Sbjct: 218 HRQARQGADFRELARRYSDLPSARNDGDLGVFQKDELAGIMLEHIPELEPGEISTILETA 277
Query: 265 KGVEYIAICD----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G ++ + R G LK + + +E+ +++VK+LR N I
Sbjct: 278 AGYQFFKLLSNQGELRATGSYEELKGKIREKLYQQALEEQFSKWVKELRENDYI 331
>gi|225874673|ref|YP_002756132.1| peptidylprolyl cis-trans isomerase SurA, putative [Acidobacterium
capsulatum ATCC 51196]
gi|225793602|gb|ACO33692.1| peptidylprolyl cis-trans isomerase SurA, putative [Acidobacterium
capsulatum ATCC 51196]
Length = 588
Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 55/296 (18%), Positives = 102/296 (34%), Gaps = 16/296 (5%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE--------LIVETLK 86
+ +I ++ +VI D + LK Q + + + LI + L
Sbjct: 57 PGTVVEQIVARVDDQVIDTSDYERAEQDLKQQAQQQNMSQAELDREKKDLLRNLIDQQLL 116
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ ++ GIT + V + L S ++ QG+ FKQ + I
Sbjct: 117 LAKGKQLGITGEDQLVER-LDAIRKQNHLDSMTALQQAVESQGLSWQDFKQQIRNNIITQ 175
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
V++ EI + K E + +L P+ Q K+
Sbjct: 176 TVIRQKVAPTIRISPDEIQKYYDQHKKEFDRPEEVRLSEILIPTPNPDDAAQVAEAKKKA 235
Query: 204 DAEESRLRLPKDCNKLEKF-ASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPY 261
D E++L+ D KL K ++ G + L P+ +N + T P
Sbjct: 236 DGIEAQLKAGGDFAKLAKSDSTGPTAPQGGDLGDFQKGQLAPELENATFPLKKGQFTEPI 295
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQN--TPTKIEKHEAEYVKKLRSNAIIH 315
T++G + + +D G + +N K++ Y+ KLR+ + I
Sbjct: 296 QTKQGWIILEVTHHQDAGLAPMNQVETQIENAVGYNKMQPALRAYLTKLRNESYID 351
>gi|315453271|ref|YP_004073541.1| hypothetical protein HFELIS_08670 [Helicobacter felis ATCC 49179]
gi|315132323|emb|CBY82951.1| putative periplasmic protein [Helicobacter felis ATCC 49179]
Length = 346
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 110/280 (39%), Gaps = 32/280 (11%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I T+N + IT I + + + AV LI++ ++ QEI++ I + +
Sbjct: 92 GIAITVNNDPITIYQIETQEKEHHI------SRQQAVNALILQRIQAQEIKRLKIDIEDD 145
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ AR+ G+ +DF L +GI +K L Q ++++N + N
Sbjct: 146 KIDAEIENIARHNGMDMQDFLRTLASEGINPTTYKAQLKKQLETRELLRN---ILLFNTN 202
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
++ N E+ + + + +I Q + LE
Sbjct: 203 TNSETKMREYYNAHKSEFSVPSEIITIRYTAQDTQALTKA------------------LE 244
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
I V+ G+ + + L+PQ + +Q +T P + G +++ K +G
Sbjct: 245 NRNLDIPGVTKGE-EKINIKTLNPQIAQMFLSTQEHTFTPILNAGGGNFVSFYIKEKIGK 303
Query: 281 EIA----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
E K +++ + + +K AEY +KLR A I +
Sbjct: 304 ENVSFSQAKHFIANKLIEEQQDKILAEYYEKLRVKAKIKF 343
>gi|317153442|ref|YP_004121490.1| SurA domain-containing protein [Desulfovibrio aespoeensis Aspo-2]
gi|316943693|gb|ADU62744.1| SurA domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 312
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 58/319 (18%), Positives = 123/319 (38%), Gaps = 27/319 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKL------- 65
+ L I + + S S A+ S +I +N ++IT ++ + + +
Sbjct: 1 MPRCIFLFISLFLLVFSTNSLAVESVYDKILVKVNEDIITQYELDEEMRPILASIKGREL 60
Query: 66 ----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
++ +L + + ++ + L QEI+K IT ++ + GL+ E F
Sbjct: 61 NEAEREQLADLRRQTLDRMVNDLLMTQEIKKFQITVTDTVIDDEIRRMKEERGLTDEAFE 120
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+ + G+ F+ L +++ K + EI A + ++ + E ++
Sbjct: 121 EMVKRDGLTIQEFRSKLKGLIEKQELLGYMVHSKVVVTDSEIEAEYEARRDNYLLEKMVG 180
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ +P + V+KRI D E L + K + SIG+ + +D
Sbjct: 181 LAILVLP--ADVSALEVRKRIMDGE---LTFDQAVLKYSVGPATDSGGSIGEVNW---AD 232
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA---ICDKRDLGGEIALKAYLSAQNTPTKI 297
L +++ ++ Q P + + ++ I R + E A + K
Sbjct: 233 LADDWRDSIEGVKQGGVGTPVEVRGQMALLSPVTIASDRLVPLEEVRDAIF-ERLMEGKR 291
Query: 298 EKHEAEYVKKLRSNAIIHY 316
E EY +KL+ +++I Y
Sbjct: 292 ETIFDEYFEKLKQSSVITY 310
>gi|183597819|ref|ZP_02959312.1| hypothetical protein PROSTU_01149 [Providencia stuartii ATCC 25827]
gi|188022575|gb|EDU60615.1| hypothetical protein PROSTU_01149 [Providencia stuartii ATCC 25827]
Length = 439
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 87/258 (33%), Gaps = 12/258 (4%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQ 78
+ + ++ +N V+ + D+ + +KL N L ++
Sbjct: 13 FASSTALAAPQQMDKVAAVVNNGVVLESDVQNMLNTVKLNARNAGQQIPDDETLRHQILE 72
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI + + Q + I VN AR GL+ E + L GI ++ +
Sbjct: 73 RLITDNIMLQMANQMQINIPEEAVNATIADIARQNGLTFEQMQARLKADGIDMAKYRSEI 132
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + +V N+ + L E+ A + + + +L +P+N Q Q
Sbjct: 133 RKEMLIAEVRNNEVRRRVTILPQEVESLAKQISSQADYEASVNLSHILIPLPENPTQEQL 192
Query: 197 FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQ 254
I ++ + KL +++ + G + +L F LK +
Sbjct: 193 QKADAIVAKIMDEIKKGTNFGKLAIAYSADPQALKGGNMGWSRLQELPVVFAEQLKSAKK 252
Query: 255 NNTTNPYVTQKGVEYIAI 272
+ P + G + +
Sbjct: 253 GDVVGPIRSGVGYHILRV 270
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 56/146 (38%), Gaps = 6/146 (4%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K I+V E R +L I + + + ++++ + K S+ +
Sbjct: 278 KTISVTEVKARHIL--IKSSPIMDDNQARQKLTQITQDIRSGKTTFENAAKEFSEDPGSA 335
Query: 231 --IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIALKA 286
G+ + + P F++ L++ ++ + P + G I + D R++ + A K
Sbjct: 336 LKGGELGWNMPDVYDPAFRDALMRLNKGEISQPVRSNFGWHLIQLEDTRNVDKTDAAQKD 395
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
K + +V++ R+ A
Sbjct: 396 QAYRLLFNRKFNEEAQSWVQEQRAAA 421
>gi|222833212|gb|EEE71689.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 93/267 (34%), Gaps = 11/267 (4%)
Query: 56 ISKRIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+++ IA Q L + ++ LIVE + QE + +G+ D V+ AR G
Sbjct: 4 VAQNIAEQGGQMPPEALLAREVLERLIVEKAQLQEAKDTGLRVDDYAVDQALTNVARQNG 63
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFMLKYGNLEMEIPANKQKM 170
L S L +G+ + F++ L Q + V + +++ + +
Sbjct: 64 LDKAGLQSRLRAEGVNEKQFREELRRQITLQRLRERDVDGRVRVTDADIDRYLAEQRSGG 123
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+ + +L S+P+N + ++ R D + K S + D
Sbjct: 124 ADKAPAAVNLGHILISVPENASPAEVAEREARAKQAAEAARTQGDFLAVVKEFSDVPDGQ 183
Query: 231 IGKAQYLLESD-LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIAL---- 284
G A + D F + ++ Q P+ + G + + +K G +
Sbjct: 184 GGGAMGMRPLDRYPELFTKAVGQTAQGGIVGPFRSGAGFHVLKVLEKSQAGMPSVVTQNH 243
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
++ + E A+ + +
Sbjct: 244 ARHILLRIGDQMTEADAAKRLADYKRR 270
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 5/168 (2%)
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F G +++ Q V + R +L I D + KR+ D +
Sbjct: 216 FRSGAGFHVLKVLEKSQAGMPSVVTQNHARHILLRIGDQMTEADAA--KRLADYKRRVDS 273
Query: 212 LPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
L + S+ + G + P+F+ +L ++P V++ GV
Sbjct: 274 GQASFESLAREFSQDGSARNGGDLGWASPGQFVPEFEQVLNALQPGQVSDPLVSRFGVHL 333
Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + ++R + + K+E ++++LR A + Y
Sbjct: 334 IQLIERRQAALTPREQRDMVRNVVRERKLETDYQTWLQELRGRAYVEY 381
>gi|145590048|ref|YP_001156645.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145048454|gb|ABP35081.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 484
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 95/303 (31%), Gaps = 32/303 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-----------RIRTTINGEVITDGDISKRIA 61
IKL+ F IVS + + ++ + +N IT DI RIA
Sbjct: 8 IKLMNFIFFFAAVLFAGIVSAQDASKTTVATDGKVRNIDGVAAVVNTGYITRKDIDDRIA 67
Query: 62 LLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+LK Q L K+ ++ LI+E ++ Q E+ G S ++ A L+
Sbjct: 68 VLKKQGTKLPEGEALRKVILERLILEKIQLQNAEQEGFYVSSKELDKIIADTAAKNKLTF 127
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA------------ 165
+ + ++ +KQ L + I + + K + EI
Sbjct: 128 VELKAKIEASSTSFEKYKQQLREEVIVSRYREREVDAKIKISDAEIDNFISERNRAMLSG 187
Query: 166 --NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
N E + + + K+ D + D +L A
Sbjct: 188 VTRPSPSANGGPEEIDVAQIFIPVDSGAGAGAQADAKKKADLLLREAKGDVDFLQLGAMA 247
Query: 224 SKIH-DVSIGKAQYLLESDLHPQFQNLLKKS-QNNTT-NPYVTQKGVEYIAICDKRDLGG 280
+K + + + Y L F ++ + + G + + D+R +
Sbjct: 248 AKDNPQIKFQELGYRPPDRLPQLFYEAVRNTGSGQVAGAVVKSPAGYHVLKVLDRRSMAA 307
Query: 281 EIA 283
Sbjct: 308 GSP 310
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRLRLPKDCNKLEKFASKIH 227
+NI + + R +L + + ++R++ ++ R + + +K++
Sbjct: 324 TPQNIAITQTNARHILLR--NRPGLSDQDAERRLQGYRDQVRAKTADFGDLAKKYSEDGS 381
Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G ++ DL P+F+ + K Q +NP T+ G I + ++R+ + +
Sbjct: 382 ASNGGNLGWMGPGDLVPEFELAMNKLQIGEVSNPVKTEFGWHLIQVIERREAQLTVEKQR 441
Query: 287 YL-SAQNTPTKIEKHEAEYVKKLRSNAII 314
A K E+ +++++LR A +
Sbjct: 442 EFARAAIRSRKFEQAYQDWMRELRDTATV 470
>gi|213581234|ref|ZP_03363060.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 203
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKDA 205
Q +R ++
Sbjct: 187 PTSEQVNDAQRQAES 201
>gi|58584292|ref|YP_197865.1| parvulin-like peptidyl-prolyl isomerase, SurA [Wolbachia
endosymbiont strain TRS of Brugia malayi]
gi|58418608|gb|AAW70623.1| Parvulin-like peptidyl-prolyl isomerase, SurA [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 384
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 108/283 (38%), Gaps = 32/283 (11%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLK-LQKING----ELEKIAVQELIVETLKKQEIE 91
A+ I +NGE I++ DI KRI L L EL+ +++LI E + E +
Sbjct: 18 AVEIEIIADVNGEPISNLDIEKRINLTHSLFGTQSIDKNELKLQILKQLIDEIIIINEAQ 77
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ I ++ V + L + + + IG N K+ + Q +W +++
Sbjct: 78 RLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLLWDKIIEV 137
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN-----QGFVQKRIKDA 205
+ + E+ K +++ +YLI F IP+ K + + V+K +
Sbjct: 138 RIVPFINISDKEVNNAKGQIEKP---DYLITFQEFIIPNQKDADVYGIAEDLVEKLRNNN 194
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQ 264
+ P K+ V++ + L +++L+ + P +
Sbjct: 195 NDFIPEAPI----------KMRKVTVN------LNQLKGNLKSILEGLKTGDIAGPVSSS 238
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ + + DK L L++ L + K + + +K+
Sbjct: 239 EDYSIVKVIDKVQL-DHAMLESTLKLKQIVVKDSESLLDNLKE 280
>gi|213611260|ref|ZP_03370086.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 200
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 77/194 (39%), Gaps = 10/194 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDN 190
++ + + I +V N+ + L E+ A + +N E + +L ++P+N
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDALAKQIGTQNDASTELNLSHILIALPEN 186
Query: 191 KLQNQGFVQKRIKD 204
Q +R +
Sbjct: 187 PTSEQVNDAQRQAE 200
>gi|320105835|ref|YP_004181425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus
saanensis SP1PR4]
gi|319924356|gb|ADV81431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus
saanensis SP1PR4]
Length = 645
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 96/284 (33%), Gaps = 16/284 (5%)
Query: 47 NGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFD 98
N ++I+ D+ ++ L+ + G E +K +++LI + L ++ GIT D
Sbjct: 87 NDQIISRSDVERQEQQLQAELRQGGAQAGDPAERQKNMLRDLIDQQLLLSRGKELGITGD 146
Query: 99 SNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ + + L S ED QG+ FK + I VV+++
Sbjct: 147 TELIRR-LDDIRKQNHLDSMEDLEKAARAQGVSFEDFKAQIRNSIITSSVVRDEVSRHLQ 205
Query: 158 NLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + K+ + + +L +P + + + +++R
Sbjct: 206 MTQADERKYYDAHKDQFAQQEQVRLSEILIPLPADATDAAIAQAQAKAEETAAKIRAGAA 265
Query: 216 CNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273
+ + G + L P + + T P T++G +
Sbjct: 266 FADVAKTTSGGPTAAQGGDLGFFKRGGLAPVLEEKTFPLKVGDFTAPIRTRQGFVILQAT 325
Query: 274 DKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ ++ G + + +++ Y+ LR +A I
Sbjct: 326 EHQEAGVPPLAQVDQQVQEAMYQDQMQPALRAYLTHLREDAYID 369
>gi|94971251|ref|YP_593299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Koribacter versatilis Ellin345]
gi|94553301|gb|ABF43225.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Koribacter versatilis Ellin345]
Length = 369
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/329 (18%), Positives = 122/329 (37%), Gaps = 21/329 (6%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--L 62
+ + + +F+K + L+ VP+ + + I +N ++IT D+ + L
Sbjct: 3 LVSVVQEFMKKILVSSFLVAALAVPMFAGDD-TVVEEIIARVNNQIITRADLRRESEQVL 61
Query: 63 LKLQKING--------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+L++ + + +K +++LI + L + GI+ D+ + + +
Sbjct: 62 DQLKQQDAATADQKFVQRQKDVLRDLIDQQLLVDKGADLGISADAELIKR-LDEMRKQMN 120
Query: 115 L-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
L S +D + KQG+ FKQ + Q I V+ + + E K+
Sbjct: 121 LASMDDLENEAKKQGVSFEDFKQNMKNQIITQRVISQEVGSHIQITKDEEQKFYDAHKSE 180
Query: 174 TVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS- 230
R + + +L + K N ++ + + L+ K + + K S
Sbjct: 181 MERPEQVRLSEILVPVDAEKDPN-ATAAQQKAEGIIAELKAGKKFDDVAKAESAGPTAKE 239
Query: 231 -IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G Y L Q ++ + + T P T++G I + + + G +
Sbjct: 240 QGGDLGYFKRGVLAKQLEDTVFPLKEGEYTEPIRTKQGFVIIKVTEHQQSGVPPLQQIEP 299
Query: 289 SAQN--TPTKIEKHEAEYVKKLRSNAIIH 315
Q K+E Y+ KLR A I
Sbjct: 300 KLQEAVYMEKLEPTLRTYLTKLREEAYID 328
>gi|308271396|emb|CBX28004.1| hypothetical protein N47_G33280 [uncultured Desulfobacterium sp.]
Length = 332
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 96/247 (38%), Gaps = 5/247 (2%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ + +LI L QEI+K GI+ + ++ + L+ E+ + + K G+ +
Sbjct: 82 REDMLDQLINRKLTDQEIKKYGISTNDKEIDNSIERIKEAKYLTDEELRNMVTKDGMTFD 141
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDN 190
F+ + + V+ + K + + A K+ + + Y + ++
Sbjct: 142 DFRDAIKENILRSKVLDIEVKSKIVITKEDTKAYYDSHKSDYMPQNKYHLFNIIIKTNSE 201
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ + + ++L+ + ++ K +++ V Y +L PQ Q+ +
Sbjct: 202 ADGDDKHEAMSVMEKIYAKLKQGQPFEEVSKDSAESSGVENSDLGYFKADELSPQIQDAI 261
Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKK 307
K Q T T G + I I D G+ +A + I+K+ ++++
Sbjct: 262 KNLKQKEFTKILETDLGYQIIYIKDIEVKPGKSLDEAAAGIQGILFNDIIDKNFKLWMEQ 321
Query: 308 LRSNAII 314
LR + I
Sbjct: 322 LRKKSYI 328
>gi|73667407|ref|YP_303423.1| hypothetical protein Ecaj_0794 [Ehrlichia canis str. Jake]
gi|72394548|gb|AAZ68825.1| ATP synthase F1 subcomplex epsilon subunit [Ehrlichia canis str.
Jake]
Length = 399
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 120/312 (38%), Gaps = 20/312 (6%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--N 69
I + L+I C++ + S +A +I +N ++I++ D+ KR+A+ K
Sbjct: 2 IINMFNHAVRLLILCVM-LFSSTVFADV-KIVAMVNDDLISNLDLEKRVAINKFFYKVDG 59
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+IA+ LI E++ +QE +K IT + Q L DF S+++ QG+
Sbjct: 60 STAAEIALDALIDESIWRQEAKKLKITVTERDILEAVKQFLVMKNLGNIDFKSYVETQGL 119
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ-KMKNITVREYLIRTVLFSIP 188
F Q++ + +W ++ + E EI N+ + N I+ ++ +P
Sbjct: 120 DYKMFMQHMKSKLLWNKILMLKVIPYIIISEKEIRDNRDCTVTNGIDTSVHIQEII--VP 177
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ N+ + + D + + + + + +++ L
Sbjct: 178 ASVSDNESIIDSIMSDLQNG-VSVESIQANKKDVLVEEASINVKNIDVDLA-------NK 229
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY---V 305
LL + P Q G I + + D+ E A + Q + +Y +
Sbjct: 230 LLNVKVGDMIGPIKNQHGSFIIKLLHRADINREFASSSVNLKQI--HLNVEEGKKYSSQI 287
Query: 306 KKLRSNAIIHYY 317
+L++ A +
Sbjct: 288 SQLKTKATCENF 299
>gi|331006695|ref|ZP_08329972.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [gamma proteobacterium IMCC1989]
gi|330419503|gb|EGG93892.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [gamma proteobacterium IMCC1989]
Length = 432
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 109/304 (35%), Gaps = 17/304 (5%)
Query: 23 IIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRI--ALLKLQKING-----ELE 73
+ VP+++ ++ A I + ++I ++ ++I A ++LQ N L+
Sbjct: 18 GLLTCVPLIALQAQANENIDGIIAIVKDDIIFAQELEQKIHQAKIRLQARNQKTDEKRLQ 77
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI+E L+ +++ + ++ Q + F +L Q +
Sbjct: 78 SQLLDALILEKLQLSLAKQNNLVATDAEIDNSIAQTKAQLQSNGASFDDYLAAQNLSQTQ 137
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNK 191
++ + + + V + + + E+ ++ + + + P
Sbjct: 138 ARKEIEKEVLISKVQQAVISQRINITDTEVDNYLESKEGQEWLTPRLHLGQIFL--PYTA 195
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q +QK K + R + ++F+ + G + DL P F +
Sbjct: 196 KNKQQTMQKAQKIYRDVSKRTNEFGVFAQRFSQGPNAEKGGDIGIQRKEDLPPLFVERVD 255
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
K T P+ + GV +A+ D++ + ++ + T E+ + + +
Sbjct: 256 KLAVGEITQPFFSDAGVHILALFDRQGAEPVIVTQYKVRHILVKPTDLFTEEEAQKKINE 315
Query: 308 LRSN 311
LR
Sbjct: 316 LREK 319
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 58/157 (36%), Gaps = 13/157 (8%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
++Q + + V +Y +R +L D + + K E R ++ + A +
Sbjct: 279 DRQGAEPVIVTQYKVRHILVKPTDLFTEEEAQ-----KKINELREKIIQG-ASFATIAQE 332
Query: 226 IHD-----VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
D + G + P F+ ++ + N + P+ + G + + +R
Sbjct: 333 YSDDIGSKLDGGDVGWSSPGVFVPAFEKAMQTTAINTISQPFKSTFGWHILTVEGQRSKD 392
Query: 280 G-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ ++ + + + ++K+LR ++ +
Sbjct: 393 IFDTVKRSQVRNIIGQQRFQDELTIWLKELRESSYVE 429
>gi|242279456|ref|YP_002991585.1| SurA domain protein [Desulfovibrio salexigens DSM 2638]
gi|242122350|gb|ACS80046.1| SurA domain protein [Desulfovibrio salexigens DSM 2638]
Length = 312
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/320 (14%), Positives = 105/320 (32%), Gaps = 27/320 (8%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------ 66
+K + F+ + + + I +NGEV+T ++++++A + Q
Sbjct: 1 MKRIIAGFLASMIIGSASFATAEEKVVDGIVAVVNGEVVTMYELNRKLAPIMKQFDGKSL 60
Query: 67 -----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ + + + I E + QE ++ + + V+ + LS EDF
Sbjct: 61 SAVEAEQLKRVRQQILDRFINEIIIDQESKRLKVDVSAQDVDNEVKAIKEKSNLSDEDFE 120
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKNITVREY 178
L+ Q FK+ + ++ K + EI A + + +
Sbjct: 121 RQLELQKTNLAAFKEKIGKDIRKHRLLSYKVKSKVVVTDDEIKAAWNSTRTDQGEVAKSV 180
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
++ +LF + + + +K +G ++
Sbjct: 181 HLKLILFP-------ENVSADQVREQIVAGETTFEEAADKYTTGPGSGSGGDLGVLEWN- 232
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPT 295
DL + L + P+ Q + + + K + +
Sbjct: 233 --DLAQTWHEALTGLKPGGISQPFEVQSFKALLKLDSYVNTEAASFEDSKQEIYQKLYRQ 290
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
K ++ A+++KKLR A+I
Sbjct: 291 KQDELFADFIKKLREKAVIE 310
>gi|289548356|ref|YP_003473344.1| SurA domain protein [Thermocrinis albus DSM 14484]
gi|289181973|gb|ADC89217.1| SurA domain protein [Thermocrinis albus DSM 14484]
Length = 283
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 31/307 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
KL +L + R+ ++NGE I + ++ LL
Sbjct: 5 GIAKLSCGVLLLTALSFWSF----GLTLLDRVVASVNGEPILESEV-----LLGKLFFGS 55
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
K + +L+ + L Q + G+ V+ Q + L+ E + L K G+
Sbjct: 56 NDRKKVLDKLVEDMLLYQYAQSKGMGVPDQMVDAAVNQILQANNLTMEGLAKELSKDGLS 115
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K +L + + + + + ++++ K K I V+ + ++
Sbjct: 116 LEDLKNFLRREILATQGITALLLRETKVQDIDVELEKLKRGMIKVKR---EISVLTVDKA 172
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK-AQYLLESDLHPQFQNL 249
K + +L + K D+ + + + DL
Sbjct: 173 KGK-----------------KLLELTEKGLDLDKVARDLGLQPERLLVSKGDLVEPLDRE 215
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + +T + + I ++ + L Q K+E+ E +KKLR
Sbjct: 216 VWAAPVGSTVVAEDKDHIYLAKILGVKEETS-SVNEEELREQILRRKLEEKREELLKKLR 274
Query: 310 SNAIIHY 316
S A+I Y
Sbjct: 275 STAVIRY 281
>gi|302039584|ref|YP_003799906.1| putative peptidylprolyl isomerase [Candidatus Nitrospira defluvii]
gi|300607648|emb|CBK43981.1| putative Peptidylprolyl isomerase [Candidatus Nitrospira defluvii]
Length = 344
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 106/315 (33%), Gaps = 35/315 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISK-------RIALL----KLQ 66
+IFC+ + S A ++ RI +N ++I ++ + R+ L L+
Sbjct: 41 ALIFCLCLLFVLISNAEAAKLEDRIVAVVNSDLIMLSELKRDLLPEQDRLRKLYKGEDLE 100
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ E + V ++I L+ Q + G+ V + + +D
Sbjct: 101 RRLKTAEAMGVTKMIERKLQLQAAKNKGVDVSDQEVVQAVEEMKKQ--------GEAIDS 152
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVL 184
N + + Q VV + + E+ Q+ ++ EY + +L
Sbjct: 153 A--DPNTARS-IREQLTLMRVVDREVRGLIMVADSEMKRYYQEHQDRFAYPEEYQLSQIL 209
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLH 243
+ +A + L+ + L +F+ G+ + + +L
Sbjct: 210 IKPRTPDGLSAAHG---RAEALLATLKQGEPFEDLALRFSDGADASRGGRLGLVRQGELI 266
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKH 300
P + L T T +G+ + + DK+ +KA + + K E
Sbjct: 267 PALEQALTSVDVGKITGIVETAEGLHIVRVDDKKPRQFRPFEQVKAEIQSLVFQQKTEDQ 326
Query: 301 EAEYVKKLRSNAIIH 315
++ L++ A I
Sbjct: 327 YQIWMADLKNKAYIE 341
>gi|124516597|gb|EAY58105.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum
rubarum]
Length = 340
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/323 (17%), Positives = 113/323 (34%), Gaps = 29/323 (8%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKIN 69
F L + +L+ F VP + + ++ +N +IT ++ + +A KL K
Sbjct: 8 FPTLFLSATLLLSFFEVPPARGERVLV-DQVMAVVNHHMITKSELDRSLAPTFKKLHKR- 65
Query: 70 GELEKIAVQEL------------IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
A +EL I E L+ +E E+ G+T + +++ + ++
Sbjct: 66 --FRGKAYRELVASLEYKLLMKKINERLELEEAERQGLTVTDDELDHAIESIMQKNNFTS 123
Query: 118 E-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
+ + L +QG+ +KQ L Q +V + E+ + K
Sbjct: 124 KWQLKTALSEQGMSYRRYKQQLRKQMTILKLVNQEVRSTVVISPDEVRQYYLAHRDKYRL 183
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN-KLEKFASKIHDVSIGK 233
+R + IP+ + Q ++ + +L+ D + + + G
Sbjct: 184 PPHVTLRDIFLRIPEGATEAQIQEIRKHGEHIVRQLKRGDDFVILAGSESEGPNAENGGA 243
Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
L + L P+ Q T+ T G I + + D + L AQ
Sbjct: 244 LGDLTKDQLLPELVQPAFTIPPGQTSGLIQTSNGFYIIKVIKREDNSFRSFKE--LKAQI 301
Query: 293 TPTKIEKHEAE----YVKKLRSN 311
+K + +++KLR
Sbjct: 302 LNDLTKKTTDKRLRIWLEKLREK 324
>gi|295704136|ref|YP_003597211.1| foldase protein PrsA [Bacillus megaterium DSM 319]
gi|294801795|gb|ADF38861.1| foldase protein PrsA [Bacillus megaterium DSM 319]
Length = 291
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 89/280 (31%), Gaps = 28/280 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ T+ E IT + L G + LI + + +E K I
Sbjct: 29 SKVVATVGDEKITKDQL-----YDALLAQGGSS---VLDSLIEQKVISKEAAKQNIKVTD 80
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+N G + + L G+ + K+ L +V++ +K +
Sbjct: 81 KEINAELENLKSQYG-GEDALNQALASSGVKLSELKKDLKTNIEAKKMVESTINIKDSEM 139
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ NK + T + +L + + + + K +D KL
Sbjct: 140 KSYFDQNKDSL--ATEAQVKASHILVADEKTAKEVKAKLDK------------GEDFAKL 185
Query: 220 EKFAS--KIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
K S + G Y + D+ F N ++P T+ G I + K+
Sbjct: 186 AKEYSTDTASKSNGGDLGYFKKGDMVEAFANQAFSMKVNEVSDPVKTEYGYHIIKVTGKK 245
Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ KA + K + +++KL+ I
Sbjct: 246 EAQKATYENSKAKIKQTLLDQKYQTEYPTWLQKLKKKYDI 285
>gi|253700324|ref|YP_003021513.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
gi|251775174|gb|ACT17755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
Length = 355
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 23/301 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVET 84
+ A S +NG IT D+ + + ++ Q + E A+++L
Sbjct: 55 PAAAQKSPAVVRVNGTPITQLDVERAVKVMLAQNKIDQPLPPELQKQAESAALEQLTAAE 114
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGL---SAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L QE KS I ++ Q + + L + +++ +
Sbjct: 115 LLYQEASKSKI----PDLDKMIEQKVSQNRQKFKTEAELVEALSALEMTLPDLEEFTRKE 170
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI---TVREYLIRTVLFSIPDNKLQNQGFV 198
+ + F K + E+ N +L +
Sbjct: 171 IVLSTYIAEHFQTKASVSDEEVKKFYDDNLNTYFKKPESVKASHILVGTDEKATPEDRKK 230
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNN 256
K +A RL+ ++ L K S + G ++ PQF+ K
Sbjct: 231 AKEKAEALLKRLQAGEEFAALAKDESTCPSATQGGNLGEFGREEMVPQFEEAAFKLKPGE 290
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ T+ G I + K++ E ++K + K ++ + ++ KL+ A I
Sbjct: 291 MSGVVETKFGYHIIKVTGKQEAAAEKLESVKETIVEFLKKQKAQQELSSFIDKLKKEAKI 350
Query: 315 H 315
Sbjct: 351 E 351
>gi|171464151|ref|YP_001798264.1| SurA domain [Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193689|gb|ACB44650.1| SurA domain [Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 482
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 87/270 (32%), Gaps = 24/270 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGI 95
+ +N +T +I RIA LK Q G L K + LI+E ++ Q E+ GI
Sbjct: 46 DGVAAVVNTGYVTRKEIDDRIATLKKQGAKLPEDGTLRKAILDRLILEKIQLQNAEQEGI 105
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ + A LS + + ++ G ++Q L + + + K
Sbjct: 106 RVTNKELDKYIGDIAAKNKLSLAELKAKINAYGTSFERYRQMLRDNIMVSRYREREVEAK 165
Query: 156 YGNLEMEIP---------------ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ EI E + + IP + K
Sbjct: 166 VKITDAEIDNFIIERTRGAAPTGVQRSAPAAKGEPEEIDVAQI--FIPVDAGAGVQVKAK 223
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKKS-QNNTT 258
+ DA R D +L A+K + + + Y L F ++ +
Sbjct: 224 KKADALLRDARGDVDFIQLGAMAAKENPKIKFQELGYRTPDRLPQLFYEAVRNTGSGQVA 283
Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ G + + D+R +G +
Sbjct: 284 NAVVKSSAGYHVLKVLDRRAVGASPPPQQV 313
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRLRLPKDCNKLEKF 222
A + +NI + + L R +L ++R++ ++ R R +K+
Sbjct: 317 DAGQAVPQNIPIIQTLSRHILLR--SRAGLTDQDAERRLQGYRDQVRARTADFAELAKKY 374
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ + G ++ DL P+F+ + + Q +NP + G I + D+R+
Sbjct: 375 SEDGSAANGGDLGWMGPGDLVPEFEQAMNRLQIGEVSNPVKIEFGWHLIQVIDRREGQLT 434
Query: 282 IALKAYL-SAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + A K+++ E+V++L NA +
Sbjct: 435 VEKQRQFARAAIRERKLDQAYQEWVRELHDNATV 468
>gi|94986747|ref|YP_594680.1| parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis
PHE/MN1-00]
gi|94730996|emb|CAJ54359.1| Parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis
PHE/MN1-00]
Length = 308
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 34/306 (11%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE---------LEKIAVQEL 80
+ ++ +NGE+IT D+ A + + Q LEK ++ +
Sbjct: 16 PVSAEQFINKTVAVVNGEIITLFDLQAETAPEIFRQQLNPNNPADKAKVEQLEKAILEGM 75
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + QE E+ + + V + + L+ E+F L+ Q + ++ FK+ +
Sbjct: 76 ISNLILTQEAERLHVNVGKDEVESEYHNFIAKSQLTPEEFQYQLELQHLTEDSFKERIRS 135
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ ++ K + EI QK + ++ + P +
Sbjct: 136 SILRSRLLGAMVGRKIVVTKKEIEDYYQKNHDKLKNNNQLQLAILVYPPDI--------- 186
Query: 201 RIKDAEESRLRLPKDCNKLEKFAS----KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255
+A++ R+ E+ G + DL+P++ L
Sbjct: 187 ---NAKDWAARIKSGSVSFEEVVKKVSVGPKAKEGGDLGSIDIEDLNPEWLEQLSTMKPG 243
Query: 256 NTTNPYVT---QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
T+ Q ++ I I E L Y+ K+E+ EY +LR A
Sbjct: 244 EVTSLIDINGLQGQLKLINIIKGEPQTLE-TLTPYIEEILREPKLEERFKEYTDQLRKRA 302
Query: 313 --IIHY 316
I Y
Sbjct: 303 VVDIRY 308
>gi|257459188|ref|ZP_05624307.1| putative periplasmic protein [Campylobacter gracilis RM3268]
gi|257443573|gb|EEV18697.1| putative periplasmic protein [Campylobacter gracilis RM3268]
Length = 296
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 107/296 (36%), Gaps = 33/296 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++F + + + + + ++ E IT +++ ++QK+ G + A++ LI
Sbjct: 5 LLFSAMICAVCANAEVVNGVIAVVDDEPITGYELA------RVQKLTGASPQAAMEILIG 58
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ L++ EI++ GI + ++ A LS + + + KQGI + FK +
Sbjct: 59 QKLQQSEIKRRGIAVNDAEIDARLKAIADQNKLSLDQLKTAVQKQGINYDDFKANVRRTL 118
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + F + + Y + LF+ D+ + +
Sbjct: 119 LEEKLYGSIF----------ADVQHRTTPENVKKFYSQNSSLFTTFDSITLTRYIAK--- 165
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261
A R+R + + K L + + + ++ Q +
Sbjct: 166 SQAPLDRIRTNPKLRPSDVYVMK---------GTLKANQMDEGLKYIVTNVEQGKFSPII 216
Query: 262 VTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T+ G E + DK R L + + T + + + +LRSNA I
Sbjct: 217 PTRNGYEMFYVNDKKGLRTLDFDSVQDKAIEGYVTSERKKAITE-FNDRLRSNANI 271
>gi|294498814|ref|YP_003562514.1| foldase protein PrsA [Bacillus megaterium QM B1551]
gi|294348751|gb|ADE69080.1| foldase protein PrsA [Bacillus megaterium QM B1551]
Length = 291
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 89/280 (31%), Gaps = 28/280 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ T+ E IT + L G + LI + + +E K I
Sbjct: 29 SKVVATVGDEKITKDQL-----YDALLAQGGSS---VLDSLIEQKVISKEAAKQNIKVTD 80
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+N G + + L G+ + K+ L +V++ +K +
Sbjct: 81 KEINAELENLKSQYG-GEDALNQALASSGVKLSELKKDLKTNIEAKKMVESTINIKDSEM 139
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ NK + T + +L + + + + K +D KL
Sbjct: 140 KSYFNQNKDSL--ATEAQVKASHILVADEKTAKEVKAKLDK------------GEDFAKL 185
Query: 220 EKFAS--KIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
K S + G Y + D+ F N ++P T+ G I + K+
Sbjct: 186 AKEYSTDTASKSNGGDLGYFKKGDMVEAFANKAFSMKVNEVSDPVKTEYGYHIIKVTGKK 245
Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ KA + K + +++KL+ I
Sbjct: 246 EAQKATYENSKAKIKQTLLDQKYQTEYPTWLQKLKKKYDI 285
>gi|57339632|gb|AAW49803.1| hypothetical protein FTT0468 [synthetic construct]
Length = 508
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITF 97
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 87 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLISQSVLLQLAERNNIMI 146
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 147 SNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQVY 206
Query: 158 NLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 207 VSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDG 266
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGVEY 269
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ ++
Sbjct: 267 SIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTLQM 326
Query: 270 IAI 272
I I
Sbjct: 327 IYI 329
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 252 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 307
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + ++
Sbjct: 308 ELKNHQVSQPFIVNHTLQMIYIYNIDEKAPILSKKVTKYYVYAIEIKLDGGMNEDGAKSS 367
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 368 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFKWVSELDSPPSLPPAAFAQLKQLK 423
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 424 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 483
Query: 312 AIIH 315
A I
Sbjct: 484 AYIE 487
>gi|332295328|ref|YP_004437251.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermodesulfobium
narugense DSM 14796]
gi|332178431|gb|AEE14120.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermodesulfobium
narugense DSM 14796]
Length = 409
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/318 (16%), Positives = 101/318 (31%), Gaps = 37/318 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL---------LKLQKIN 69
F L + +V VS + T+NGE I + K + + L
Sbjct: 42 KFWLGVLIVVLAVSGAYTLFEFQPVATVNGEPIRRYEYEKTLGDAVSYYEQYGINLYDPK 101
Query: 70 G-----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
EL+K + +I + QE +K I + V+ + ++ S +DF L
Sbjct: 102 EASFFLELKKQVLNHMIDNKIITQEAKKENIKITPSEVDARIDEIKKSFP-SEKDFYEAL 160
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
KQ I + + Q + K E E+ A + K + + + +R
Sbjct: 161 AKQKISMGELRNIIEQQLTAEALFK-KLTSNVTISEAEVKAYYEEHKKEFVQPEQIHLRH 219
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLES 240
+L +++ KD L K S G ++ ++
Sbjct: 220 ILVKTEQEANNIYEQLKQ------------GKDFATLAKEYSIDTPTKDKGGDLGWISKA 267
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTK 296
L P + + N + P + G I R +L + + +
Sbjct: 268 SLVPDLAKAADELKDNEFSKPIKSPFGYHIIEKLGTRPSKELSFDEVKNTLTAQLLRNKQ 327
Query: 297 IEKHEAEYVKKLRSNAII 314
+ ++ K+ + + I
Sbjct: 328 AQSL-EKWFKEKKEQSKI 344
>gi|315637986|ref|ZP_07893171.1| SurA domain protein [Campylobacter upsaliensis JV21]
gi|315481834|gb|EFU72453.1| SurA domain protein [Campylobacter upsaliensis JV21]
Length = 298
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 100/303 (33%), Gaps = 46/303 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ ++ V+ + + + + + E IT+ DI + + LLKL + A+ LI
Sbjct: 30 ILMILLFFVAIVNAKVLNSVALVVEKEPITNYDIEQTMKLLKL------PREQALAVLIN 83
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ +I++ I + V+ + ++ E F + L +G F+ L
Sbjct: 84 EKMELSQIKQFSIVVNELEVDAAISKILTQNKMNLEQFKNSLKAKGQNYELFRHNLKKDL 143
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + + +++ K +E + + + +Q ++K
Sbjct: 144 ------EKRKLYEKIASMNKTDFSEESAKKFFEANKEKFLFYTSIDVKIYRSNDQAILEK 197
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
D K K + H+ L + +
Sbjct: 198 MKAD--------KKITLKAQNVNLNPHNAD------------PRLLALLSQLKIGEFSPV 237
Query: 261 YVTQKGVEYIAICDKR-------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+++G E + K + + + Y + + + +Y KLRS
Sbjct: 238 LNSKEGFELYEVMAKGGANVPEFEQIKDSVMNVYF-----NEQRQNYIQDYFDKLRSKLN 292
Query: 314 IHY 316
I Y
Sbjct: 293 IEY 295
>gi|303327130|ref|ZP_07357572.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
sp. 3_1_syn3]
gi|302863118|gb|EFL86050.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
sp. 3_1_syn3]
Length = 312
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/328 (17%), Positives = 124/328 (37%), Gaps = 47/328 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-- 73
+ F+L++ V A +++ +NG+VIT D+ ++ AL +L +
Sbjct: 1 MKKTFILLLAIWFCGVCGVQAAQLNKVAAVVNGQVITMFDL-QKTALPELGRARLNPNNP 59
Query: 74 ----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ + +I++ L QE ++ I+ + V+ V+ + L+ + F +
Sbjct: 60 AQAKEVEKVFRKVLDMMIMDILLGQEAKRLKISVSPSEVDNELVKMMKARNLTKQQFEAQ 119
Query: 124 LDKQGIGDNH----FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
L +Q I + F++ L Q I V ++ ++ A+K + + +
Sbjct: 120 LAQQKISIDEIRQNFEKSLLRQKIMGMEVGRKVVVTPAEIKAYYEAHKDNLYDRSG--LH 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ ++++ N ++ EE+ + NK + G +
Sbjct: 178 MGVLVYAPNVNAKSIAAQIKSGKLSFEEAAAKYSIAPNKDK----------GGDMGPVEW 227
Query: 240 SDLHPQFQ-NLLKKSQNNTTNPYVTQK---GVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
L+P+++ L+K + T+ + Q V GG+ A K Q TP
Sbjct: 228 DRLNPEWEGRLIKMKPGDVTDIFDLQGRKAQVHLF------RPGGDNAEKQLTLEQATPQ 281
Query: 296 --------KIEKHEAEYVKKLRSNAIIH 315
K + +Y +LR+ A+I
Sbjct: 282 IDAILRQPKAMERFEDYTSQLRNKAVID 309
>gi|154174986|ref|YP_001408954.1| ferric receptor CfrA [Campylobacter curvus 525.92]
gi|153793160|gb|EAU01437.2| ferric receptor CfrA [Campylobacter curvus 525.92]
Length = 291
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/322 (16%), Positives = 116/322 (36%), Gaps = 41/322 (12%)
Query: 1 MTSKVFTSL--SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK 58
M +FT+ FI +F + + + S + M + I + E IT ++ +
Sbjct: 1 MAQIIFTNYLNKGFIMTKKLFFAASVCAALNLFSAQ---MVNGIAAIVENEPITLYEVYQ 57
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L++ E A+ LI + L++ +I+ GI+ VN A+ G+++
Sbjct: 58 ------LKEQLKTDESQALNLLIRDRLEQAQIKNLGISVTPFEVNERIDAIAKQNGMTST 111
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
F S ++ QG FK + + + + +N N+ E + +
Sbjct: 112 QFRSSVESQGTSFTDFKNEVEKKMLQEKLYRNIASEAGKNVTDERAKAYYEANKEQFNIF 171
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
++ F +++ E R + S + V
Sbjct: 172 NSAEIVL-----------FRAASMQELENQRGK-----------LSPLKGVQAQNLTLEY 209
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
+S +PQ +++ + + T + TQ+G + + +K +G + + +
Sbjct: 210 QSA-NPQLASIIANTAIGDFTQIFKTQEGFDMFYVKNK--IGSYTPSFDQIKDEIINSLY 266
Query: 298 EKHEAE----YVKKLRSNAIIH 315
+ + + Y KLR+ A +
Sbjct: 267 QNEQQKTMQDYFDKLRAKAKVQ 288
>gi|322379755|ref|ZP_08054065.1| chaperone SurA [Helicobacter suis HS5]
gi|321147826|gb|EFX42416.1| chaperone SurA [Helicobacter suis HS5]
Length = 371
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 107/281 (38%), Gaps = 34/281 (12%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I T+N + IT I + + + + A+ LI++ ++ QEI++ I + +
Sbjct: 118 GIALTVNNDPITLYQIEMQEKVNHV------NRQQAINSLILQRIQAQEIKRLKIDIEDD 171
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V+ A++ G++ DF L +GI +K L Q ++++N +
Sbjct: 172 KVDAEIENIAKHNGMNVSDFMRTLAGEGINPVAYKAQLKKQLETRELLRNILLFNANTNS 231
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
Y F++P + L + + + +
Sbjct: 232 ETKMREY----------YNAHRDEFTVPSDVLATRYTAKDTQTLTQALEHKDTD------ 275
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI-----CDK 275
+ V+ G+ + + L+PQ + ++ +T P + G Y+A K
Sbjct: 276 -----VPGVTKGE-ERISIKALNPQIAQMFLSTKEHTFTPILNAGGGNYVAFYIEEKLGK 329
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+++ + +++ + + +K AEY +KLR A I +
Sbjct: 330 QEVSF-AQARGFIANKLIEEQQDKILAEYYEKLRVKAKIKF 369
>gi|307719645|ref|YP_003875177.1| PPIC-type PPIASE domain-containing protein [Spirochaeta thermophila
DSM 6192]
gi|306533370|gb|ADN02904.1| PPIC-type PPIASE domain protein [Spirochaeta thermophila DSM 6192]
Length = 336
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 105/295 (35%), Gaps = 17/295 (5%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKKQ 88
S + +NGE + ++ + + Q +L + + LI L Q
Sbjct: 43 SGEVAARVNGEEVPSKEVEREVQRYVAQYQQYGMEVSPEEEQKLREQVLDVLIGRLLLLQ 102
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E ++ G++ D V Q+ +G S E F + L + G + F++ L+ + VV
Sbjct: 103 EAKRMGLSVDQAQVEAQIEQYKLQSG-SEETFKNILAQAGYTEEEFREELSRAFLLQQVV 161
Query: 149 KNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ E A ++ + + R +L + + + +
Sbjct: 162 DEKVTKHLSVSDEEARAYYDENPEQFEQPEQIRARHILIRLDPDASKEEEEAAYAKIHEV 221
Query: 207 ESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
+ +L+ D +L + ++ + G + + P F+ N ++ T+
Sbjct: 222 QEKLKQGADFAELARTYSEGPSAPNGGDLGFFGRGQMVPAFEEAAFALEVNQVSDVVRTE 281
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAIIHYY 317
G+ I + DK++ G + + K + V++L+ A I Y
Sbjct: 282 YGLHLIQVTDKQEAGKASFEEVKDQLKEMLLQQKSSEAINALVEELKGKAEIEIY 336
>gi|197118895|ref|YP_002139322.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter
bemidjiensis Bem]
gi|197088255|gb|ACH39526.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter
bemidjiensis Bem]
Length = 351
Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 27/303 (8%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVET 84
+ A S +NG IT D+ + + ++ Q + E A+++L
Sbjct: 51 PAAAQKSPAVVRVNGTPITKLDVERAVKVMLAQNKVDQPIPPELQKQAESAALEQLTSAE 110
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGL---SAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L QE KS I ++ Q + + L + +++ +
Sbjct: 111 LLYQEASKSKI----PDLDKMIEQKVSQNRQKFKTEAELVEALSALEMTLPDLEEFTRKE 166
Query: 142 SIWPDVVKNDFMLKYGNLEMEI-----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + F K + E+ Q K +L +
Sbjct: 167 IVLSTYIAEHFQNKASVSDEEVKKFYDDNLNQYFKKPES--VKASHILVGTDEKSTPEDK 224
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQ 254
K +A RL+ +D + K S S G + P+F+ K
Sbjct: 225 KKAKEKAEALLKRLQAGEDFAAVAKGESTCPSASEGGDLGEFGRGQMVPEFEEAAFKLKP 284
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T+ G I + K++ E K + K ++ + ++ +L+ A
Sbjct: 285 GEMSGVVETKFGYHIIKVTGKQEAAAEKLENVKETIVEFLKKQKEQQELSNFIDELKKKA 344
Query: 313 IIH 315
I
Sbjct: 345 KIE 347
>gi|311104077|ref|YP_003976930.1| chaperone surA [Achromobacter xylosoxidans A8]
gi|310758766|gb|ADP14215.1| chaperone surA [Achromobacter xylosoxidans A8]
Length = 532
Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 44/291 (15%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------NGELEKIA 76
P + + I ++ +VIT ++ R A L++ + L+
Sbjct: 51 AAPAPAPQREQFVDGIAAVVDKDVITLREL--RDASLRISGELKSRGIQVPDDQTLQHQV 108
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q LI+E +++ E ++ GI D V+ A ++ ++K G + +++
Sbjct: 109 LQRLIMERVQRHEADRLGIRVDDAQVDQAIQTIAARNKITVAQLRQEIEKSGTHWDGYRK 168
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVRE----------------- 177
L + + + + E+ A Q+
Sbjct: 169 SLRDEIRTDRLRQRAVDSTIVISDAEVDAFLKDQRRNPAFGAAPQAAPQPQPQAQPQPEP 228
Query: 178 -----------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Y + +L +P+ Q ++ + ++ + D L AS
Sbjct: 229 QQAAAPSGPMLYALAQILVRVPEGSSPEQLAALRKKAEGLLAQAKRGDDFASLAAAASDG 288
Query: 227 HDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ G + D P Q + + ++ + G I + D+
Sbjct: 289 PEALQGGVMGVRPLDGWPDLFVQAVSNLQKGQVSSLIQSGNGFHIIKVMDR 339
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 11/152 (7%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-D 228
+ V + R +L + + + ++R+ E+ R RL K E A + D
Sbjct: 372 QGPVEVMQTRARHILIKT--STVMSDELARQRL---EQVRQRLVSGGAKFEDMARQYSQD 426
Query: 229 VS---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIA 283
+ G+ +L + P F+ + + P + G I + ++R +
Sbjct: 427 ATAPQGGELGWLNPGETVPPFEAAMNALKPGEISQPVQSPFGWHLIEVEERRQHDATDDM 486
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + +++++LR+ A I
Sbjct: 487 ARMKARQILFERRAQPAFEDWLEQLRAQAYID 518
>gi|225873725|ref|YP_002755184.1| peptidyl-prolyl cis-trans isomerase, PpiC type [Acidobacterium
capsulatum ATCC 51196]
gi|225793223|gb|ACO33313.1| peptidyl-prolyl cis-trans isomerase, PpiC type [Acidobacterium
capsulatum ATCC 51196]
Length = 372
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 107/318 (33%), Gaps = 39/318 (12%)
Query: 37 AMSSRIRTTINGEVITDGDI----SKRIALL--KLQKINGE-LEKIAVQELIVETLKKQE 89
A + + T+NG+ I + + K K+ G+ + + LI E + Q
Sbjct: 46 AHKADVLATVNGKPIMKSQVDLLYEANVGKQPEKPTKVQGDIVRLNILSRLINEEILMQR 105
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K + + V + + ++F L +Q + + KQ + Q +
Sbjct: 106 AAKMNLVASNEDVESRLNEI--KAPFTPDEFQKQLAQQHLTLDALKQQIRNQLTEQKLFN 163
Query: 150 NDFMLKYGNLEMEIPANKQKMK---NITVREYLIRTVLFS-IPDNKLQN---------QG 196
+ K + +I A K N+ ++ + +L + IP+N +
Sbjct: 164 KEINSKIDVTDDQITAYYNAHKAEFNLPQPQFHLAQILVTNIPENAKNSGNLQNSKAMND 223
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDL---HPQFQNLLK 251
KR + RL+ D L S+ + + G ++ + +L + + K
Sbjct: 224 AEAKRKIQMLDDRLKNGDDFGTLASNFSENPQNSSNGGDMGFISQQELQSDPDVWGAVSK 283
Query: 252 KSQNNTTNPYVTQK--------GVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEK 299
S T G + DK G + ++ + + ++ +
Sbjct: 284 LSPGEITPVLPVYATQDHKKVIGYAIYKLLDKEGAGQLELSDPRVQQSIRQRLHESRSQL 343
Query: 300 HEAEYVKKLRSNAIIHYY 317
+ Y++ LR A + Y
Sbjct: 344 MQNAYLEMLRDQAHVVNY 361
>gi|322434749|ref|YP_004216961.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp.
MP5ACTX9]
gi|321162476|gb|ADW68181.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp.
MP5ACTX9]
Length = 672
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 97/284 (34%), Gaps = 16/284 (5%)
Query: 47 NGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEIEKSGITFD 98
N ++I+ D+ + L+ + L +K ++++I + L + ++ G+
Sbjct: 79 NDQIISRSDVDRSEEQLEQESAQQNLSPADLASRQKDMLRDMIDQQLLLSKAKELGLNA- 137
Query: 99 SNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
V + L S +D +QG+ FK + Q + VV+++ +
Sbjct: 138 DAEVIRRLDDIRKQNKLDSMDDLEKAARQQGVSFEDFKAQIRNQILTQQVVRDEVGRRLQ 197
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-- 215
+ E + K + +R +P + +++ A + L K
Sbjct: 198 TTQAEQAKYYEAHKKDFEQPEQVRLSEILVPLPDTASPAEIEQAETKANGLKSELMKGGD 257
Query: 216 -CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAIC 273
+K + G+ L ++ + +T P T++G + +
Sbjct: 258 FAEVAKKNSGGPTAAQGGELGLFKRGALAKVIEDQTFALAPGESTQPIRTRQGFVILKVN 317
Query: 274 DKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAIIH 315
+ ++ G Q ++ Y+ KLR NA +
Sbjct: 318 EHQEPGAAPMKDVEPQIQEALYMNAMQPALRAYLTKLRENAYVD 361
>gi|118497158|ref|YP_898208.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. novicida U112]
gi|194323456|ref|ZP_03057233.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
novicida FTE]
gi|118423064|gb|ABK89454.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella novicida
U112]
gi|194322311|gb|EDX19792.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
novicida FTE]
Length = 469
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 104/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
T + ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 TISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 DGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 222 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 277
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + ++
Sbjct: 278 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGGMNEDGAKSS 337
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 338 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAAFAQLKQLK 393
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 394 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 453
Query: 312 AIIH 315
A I
Sbjct: 454 AYIE 457
>gi|56707610|ref|YP_169506.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670081|ref|YP_666638.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. tularensis FSC198]
gi|254370127|ref|ZP_04986133.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874430|ref|ZP_05247140.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604102|emb|CAG45101.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110320414|emb|CAL08484.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. tularensis FSC198]
gi|151568371|gb|EDN34025.1| hypothetical protein FTBG_01231 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840429|gb|EET18865.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 473
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITF 97
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 61 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLISQSVLLQLAERNNIMI 120
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 121 SNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQVY 180
Query: 158 NLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 181 VSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDG 240
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGVEY 269
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ ++
Sbjct: 241 SIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTLQM 300
Query: 270 IAI 272
I I
Sbjct: 301 IYI 303
Score = 36.9 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 226 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 281
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + ++
Sbjct: 282 ELKNHQVSQPFIVNHTLQMIYIYNIDEKAPILSKKVTKYYVYAIEIKLDGGMNEDGAKSS 341
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 342 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFKWVSELDSPPSLPPAAFAQLKQLK 397
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 398 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 457
Query: 312 AIIH 315
A I
Sbjct: 458 AYIE 461
>gi|224456680|ref|ZP_03665153.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158767|gb|ADA78158.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. tularensis NE061598]
Length = 467
Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITF 97
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLISQSVLLQLAERNNIMI 114
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 SNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQVY 174
Query: 158 NLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDG 234
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGVEY 269
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ ++
Sbjct: 235 SIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTLQM 294
Query: 270 IAI 272
I I
Sbjct: 295 IYI 297
Score = 36.9 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 220 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 275
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + ++
Sbjct: 276 ELKNHQVSQPFIVNHTLQMIYIYNIDEKAPILSKKVTKYYVYAIEIKLDGGMNEDGAKSS 335
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 336 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFKWVSELDSPPSLPPAAFAQLKQLK 391
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 392 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 451
Query: 312 AIIH 315
A I
Sbjct: 452 AYIE 455
>gi|149194720|ref|ZP_01871815.1| possible periplasmic protein [Caminibacter mediatlanticus TB-2]
gi|149135143|gb|EDM23624.1| possible periplasmic protein [Caminibacter mediatlanticus TB-2]
Length = 271
Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/304 (18%), Positives = 111/304 (36%), Gaps = 49/304 (16%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84
I+ +++ + + R+ +NGE IT DI+K L + + A+ LI +
Sbjct: 5 ILILIFLNFVNAKIVDRVVAVVNGEPITSYDITKTFKSLNI------SPREALNILIDQK 58
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF----KQYLAI 140
+ + EI++ GI D + + A+ G+S +F ++L ++G N+F K+ +
Sbjct: 59 IIENEIKRRGIEVDDFDIENAIEKIAKQNGMSVFEFKNYLKERG-EYNNFLKNLKKDIQK 117
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQK---MKNITVREYLIRTVLFSIPDNKLQNQGF 197
Q ++ +V + + L+ NK+K K I V EY+ + N
Sbjct: 118 QKLFAQIVNSKLKVSNKELKNFYDQNKEKFTTFKQIEVIEYISQ------------NPDE 165
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
++ K+ K+E K + + L ++
Sbjct: 166 LKHIKKNPL-----YNSSNIKIENRVFKYN-------------QIPLNLMFLFNSTKEGE 207
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPTKIEKHEAEYVKKLRSNAI 313
T I +K++ + + ++ Q K EY L++ A
Sbjct: 208 FTPIINNGNSYVMFYI-NKKEGKVILPFEQIKNIIANQLMQQKRNAILKEYFNTLKNQAD 266
Query: 314 IHYY 317
I +
Sbjct: 267 IEIF 270
>gi|254373986|ref|ZP_04989468.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida
GA99-3548]
gi|151571706|gb|EDN37360.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida
GA99-3548]
Length = 469
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 104/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
T + ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 TISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 DGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 222 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 277
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + + +
Sbjct: 278 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMNEEGAKSS 337
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 338 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAAFAQLKQLK 393
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 394 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 453
Query: 312 AIIH 315
A I
Sbjct: 454 AYIE 457
>gi|222100637|ref|YP_002535205.1| Basic membrane protein [Thermotoga neapolitana DSM 4359]
gi|221573027|gb|ACM23839.1| Basic membrane protein [Thermotoga neapolitana DSM 4359]
Length = 329
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/334 (15%), Positives = 107/334 (32%), Gaps = 47/334 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD----------------GDISKR 59
+ F++I+ ++ SS + +NG+ IT I R
Sbjct: 1 MKKVFLVILLVTTATFFSQATTTSSTVVAIVNGQPITSDLLELEADINGILKSIAQIDMR 60
Query: 60 IALLKLQKINGELE------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QH 109
L L + LI + L +Q EK G+ VN +
Sbjct: 61 F-FNVLTGTEEGLRLLLKYKMEVLNSLIDDLLIQQLAEKEGVGVTDEEVNAEVEKRLKET 119
Query: 110 ARNTGLSAEDFSSFLDKQGIG-DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
+ G++ ED FL G G FK+ L + K Q
Sbjct: 120 VESMGITLEDLDKFLQSAGYGDLETFKKRLKWHLK-TQLSLQRLQEKITQDATVTVEEAQ 178
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
N Y + + + + +I +A SR+R +D ++
Sbjct: 179 NYYNQNKEAYRV-----PAAVHLYRISAEEKGKIDEAL-SRIRKGEDFLEVATKV----- 227
Query: 229 VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALK 285
+ G ++ E +L ++++ + + P+ ++ G + +KR + +K
Sbjct: 228 ATGGDLGWIEEGELEKDLESVIFEAPEGAILGPFESKGGFMLYKVVEKRASSYKKFEEVK 287
Query: 286 AYLSAQNTPTKIEKHEAEY----VKKLRSNAIIH 315
+ + K + ++ ++ + N+ I
Sbjct: 288 EEIINKLLSEKKAQIWNDWFNKTFEEFKKNSHIE 321
>gi|322420756|ref|YP_004199979.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
gi|320127143|gb|ADW14703.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
Length = 323
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/324 (16%), Positives = 110/324 (33%), Gaps = 20/324 (6%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+S KL+ + C +P S K + ++ +NG VIT ++ + + L Q
Sbjct: 1 MSALKKLIPVTVAALALCALPGCSDKGQTGAPVVK--VNGSVITKPELDRAVKALLAQNK 58
Query: 69 NGEL---------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
+ A+++L L QE +K I V + ++ + + E+
Sbjct: 59 VTQALPPEQMKKAADSALEQLTSAELLYQEGKKLEIKDLEQQVEQKYQKNRTSFP-TKEE 117
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI---TVR 176
+ L G+ + ++ + + + + V F K + E K
Sbjct: 118 YEKALKATGMTEAEVREMMRKEIVVNNFVDKQFSSKATCSDAEARKFYDDNKAKLFEKGE 177
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQ 235
R +L S+ + + +A R++ +D + K S + G+
Sbjct: 178 RLRARHILVSVDQKGGPEEKKKAREKAEALLKRVQKGEDFAAVAKVESTCPSRANGGELG 237
Query: 236 YLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ + P F+ K + + T+ G I + ++ +
Sbjct: 238 VFGKGQMTPPFEKAAFALKGKGELSKVVETEFGYHIIKLEERIAPSNDRFEDVKFQIAQY 297
Query: 294 PTKIE--KHEAEYVKKLRSNAIIH 315
K + K A ++ +LR A I
Sbjct: 298 LKKEQTRKAVAAFLAELRHKAKIE 321
>gi|134302454|ref|YP_001122424.1| hypothetical protein FTW_1602 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050231|gb|ABO47302.1| hypothetical protein FTW_1602 [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 467
Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 103/243 (42%), Gaps = 13/243 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITF 97
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKRQALQDLISQSVLLQLAERNNIMI 114
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 SNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQVY 174
Query: 158 NLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVNDG 234
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGVEY 269
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ ++
Sbjct: 235 SIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTLQM 294
Query: 270 IAI 272
I I
Sbjct: 295 IYI 297
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 79/240 (32%), Gaps = 14/240 (5%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 220 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 275
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + ++
Sbjct: 276 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGGMNEDGAKSS 335
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNT 257
R K A ES K K + + A+ L P F L + +N
Sbjct: 336 LERAKLAIESGQEFTKVALKYNQDYDHPNGNFRWVAELDSPPSLPPAAFAQLKQLKENEL 395
Query: 258 TNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P+ + I ++ E + K ++ ++ ++ +A I
Sbjct: 396 SEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDDAYIE 455
>gi|225848231|ref|YP_002728394.1| SurA N- domain family [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644703|gb|ACN99753.1| SurA N- domain family [Sulfurihydrogenibium azorense Az-Fu1]
Length = 285
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 53/303 (17%), Positives = 112/303 (36%), Gaps = 33/303 (10%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
FVL + V + + + + +I +NGE + D+ K++ +K A ++
Sbjct: 10 FVLTVLGFVKAENLEGYQLFDKIVLVVNGEPVLKSDVEFAKEWYKIKD-----DKQAQEK 64
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYL 138
+I L Q+ K GI+ V+ + A+ + E F L+K GI K+++
Sbjct: 65 IIDSILLSQQARKLGISVSPKEVDNALLSIAKANNIQDLETFKKELEKNGISYTKLKEFI 124
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + F L+ + + + + +K I + I ++ + V
Sbjct: 125 TRDLVSNKFLH--FYLRDYITKGIVEGSVEDVKKIR---------MIYISKDRPDYESVV 173
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
+ + + + K + G + + DL + + + + + +
Sbjct: 174 KLLKEKLN--KNNFSEYAAKYSDDKFTAENA--GLLGEVKKGDLAEELDKEVFSRKEGDI 229
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE---YVKKLRSNAII 314
T++G +I I + K T +EK + E Y+KKLR A+I
Sbjct: 230 FQ-VDTKEGTYFIYIEKEE-------KKLIPKENLTEKDMEKLKREYDMYLKKLREKAVI 281
Query: 315 HYY 317
+
Sbjct: 282 QRF 284
>gi|332798185|ref|YP_004459684.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tepidanaerobacter
sp. Re1]
gi|332695920|gb|AEE90377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Tepidanaerobacter
sp. Re1]
Length = 320
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 108/327 (33%), Gaps = 43/327 (13%)
Query: 20 FVLIIFCIVPIVSYKSWAMSS---------RIRTTINGEVITDGDISKRIALLK-LQKIN 69
+L++ C++ + ++ + +N E+I D +++ +K + N
Sbjct: 7 SILLLICVIAMAGCQNVEKVETQGKIIDGKEVIAKVNDELILKSDYDRQVLQVKSALEAN 66
Query: 70 G-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
G E+ + ++ +I + L Q+ EK IT
Sbjct: 67 GQDFSTDEGKKVLKEIREKVLESMINDQLILQQAEKDNITLGEKEFKQAISDL-EQYHGG 125
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK---NI 173
+ +L++Q + + F++ + Q + K + E+ + K +
Sbjct: 126 KDALDKYLEQQELDRSSFEKLVKEQLVINQF-KEKLTSDIKITDEEVKKFYEDNKTMFEL 184
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--I 231
E +L + +K + + ++ D L K SK
Sbjct: 185 PAPEIRASHILV-------DTENEAKKILAE-----IKAGGDFAALAKDYSKDPGSKELG 232
Query: 232 GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
G Y + + P+F+ ++ T G I + +R K Y+ +
Sbjct: 233 GDLGYFSKGKMDPEFEKAAFALKPGEISDVVKTTFGYHIIKVTGERTSLSFDDAKDYIKS 292
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+K E+ +Y+ + + + I Y
Sbjct: 293 NLENSKKEEEFNKYLDEWKKQSKIEKY 319
>gi|328675683|gb|AEB28358.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Francisella cf. novicida 3523]
Length = 469
Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 105/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N + IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSKPITSFELDQEVAKLEAMQPNSTFNADPLQLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
T + ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 TISNQQLDSAIQDIAAKNGVSVESLKLNIEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKQFDREMAPVKLYTLKNLIIALPDSKKARQKKIDLFKKLALVVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 DSNIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKKYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 80/240 (33%), Gaps = 14/240 (5%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + + ++ F + + + S + Q + + +K+Y+
Sbjct: 222 KIDLFKKLALVVNDSNID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKKYIK-- 277
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + + +
Sbjct: 278 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMTEEGAKSS 337
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNT 257
R K A ES + K K + + ++ L P F L + +N
Sbjct: 338 LERAKLAIESGQQFTKVAMKYNQDYDHPNGNFRWVSELDSPPSLPPAAFAQLKQLKENEL 397
Query: 258 TNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P+ + I ++ E + K ++ ++ ++ +A I
Sbjct: 398 SEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDDAYIE 457
>gi|115315252|ref|YP_763975.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
OSU18]
gi|169656704|ref|YP_001429113.2| hypothetical protein FTA_1682 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368149|ref|ZP_04984169.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
257]
gi|115130151|gb|ABI83338.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
OSU18]
gi|134253959|gb|EBA53053.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
257]
gi|164551772|gb|ABU62157.2| hypothetical protein FTA_1682 [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 475
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 61 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 120
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 121 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 180
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 181 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 240
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 241 NGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 300
Query: 268 EYIAI 272
+ I I
Sbjct: 301 QMIYI 305
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 86/252 (34%), Gaps = 20/252 (7%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K A Q+ I KK + + + D + + F Q +S S + I +
Sbjct: 222 KKARQKKID-LFKKLALAVNNGSIDFSEIVKQFSQ--APNAVSGGIVSQQVKFDSI-PDI 277
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
+K+Y+ + V F++ + + I +K ++ V +Y + + +
Sbjct: 278 YKEYIK--ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGGM 335
Query: 192 LQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ- 245
++ R K A ES K K + + G +++ E L P
Sbjct: 336 NEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAA 391
Query: 246 FQNLLKKSQNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAE 303
F L + +N + P+ + I ++ E + K +K
Sbjct: 392 FAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQKIYKT 451
Query: 304 YVKKLRSNAIIH 315
++ ++ +A I
Sbjct: 452 WLTSMKDDAYIE 463
>gi|310657790|ref|YP_003935511.1| foldase lipoprotein [Clostridium sticklandii DSM 519]
gi|308824568|emb|CBH20606.1| putative foldase lipoprotein (Late stage protein export
lipoprotein) precursor [Clostridium sticklandii]
Length = 354
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 62/323 (19%), Positives = 122/323 (37%), Gaps = 31/323 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ------------ 66
++ I + + + A ++ +N I+ D K +A++K Q
Sbjct: 6 SLIMSSLMIFSLAACSNTASANEWAAKVNDVEISYSDYEKNLAIIKKQIEATVGADIWTQ 65
Query: 67 ------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
N L+ +++LI + L E +K IT D++ F Q S D+
Sbjct: 66 DSGQGKTYNEILKDQVLEKLIEDQLILAEAKKENITVDADEFEKEFTQFKEQVK-SLPDY 124
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYL 179
+FL ++GI D K+ L +I + K FM K E ++ +N V E
Sbjct: 125 ETFLKEEGITDEFLKKQLETDTIVFEY-KEKFMEKNTPSEEDLKKYYDDNQENYNVNEVK 183
Query: 180 IRTVLFSIPDN---KLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGK 233
+L D L + K+ +A +++ +D L K S + V+ G
Sbjct: 184 ASHILLKTVDENFVPLPEDKIAEIKKEAEAVLAKVNSGEDFAVLAKEYSQDEASAVNGGD 243
Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
+ + + +F+++ N ++ T G I + +K++ E+ +
Sbjct: 244 LGFFAKGVMVKEFEDVAFSLEPNQVSDLVETTYGYHIIKVFEKKN---EVTPFEDVKENI 300
Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315
+K ++V L+ +A I
Sbjct: 301 KNELAQKSYLDFVASLKESAKIE 323
>gi|220932053|ref|YP_002508961.1| peptidyl-prolyl cis-trans isomerase [Halothermothrix orenii H 168]
gi|219993363|gb|ACL69966.1| peptidyl-prolyl cis-trans isomerase [Halothermothrix orenii H 168]
Length = 495
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 56/334 (16%), Positives = 113/334 (33%), Gaps = 31/334 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSY-----KSWAMSSRI----RTTINGEVI---T 52
+F L ++ K + + V + + + S A SS I +N I T
Sbjct: 1 MFKKLRNYSKYIIYFVVAALVLTGAFLGFGAYRNSSPAASSVIDPNYIARVNDTSIPRET 60
Query: 53 DGD-ISKRIALLKLQKINGEL-EKIAVQELIVETLKKQEIEKSGIT--FDSNTVNYFFVQ 108
+ +L + + +LI L QE EK GI V +
Sbjct: 61 YYQYLQNNAQFAQLSREQQVPYRLNLLNQLIERELLLQEAEKLGIESNPTDKEVKEQINK 120
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
++ E LD +GI FK+ + ++++ Y +E+ ++
Sbjct: 121 MLEAYNITEEKLKELLDSRGIKYEDFKEDIRHNIKTSNIIRKTIEHTYKGVEVSEDEIRE 180
Query: 169 KMKNITVREYLIRTVLFSIP---DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ +R L ++ + K + + ++K +K+ EE + + K K
Sbjct: 181 AYEK-------VRPALIAVNIEGEKKKEARAKIEKALKELEEGKA-FGEVAAKYSDL--K 230
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IA 283
+ D +G + + T++ +KG + + DK+ GE
Sbjct: 231 LKDGDLGFIGRNNGFLPQEVLDKAFELEKGKTSDIIEGEKGYYIVKVIDKKLARGEEFEK 290
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ L Q K + +++ + A I Y
Sbjct: 291 SREELKDQLLKQKQNRTYQNWLRDTKKQADIEIY 324
>gi|187932060|ref|YP_001892045.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712969|gb|ACD31266.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 469
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 DGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 222 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 277
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ + +Y + + + ++
Sbjct: 278 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKITKYYVYAIEIKLDGGMNEDGAKSS 337
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 338 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAAFAQLKQLK 393
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 394 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 453
Query: 312 AIIH 315
A I
Sbjct: 454 AYIE 457
>gi|187477204|ref|YP_785228.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N]
gi|122070624|sp|Q2KXA6|SURA_BORA1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|115421790|emb|CAJ48301.1| survival protein (peptidyl-prolyl cis-trans isomerase) [Bordetella
avium 197N]
Length = 506
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 92/271 (33%), Gaps = 30/271 (11%)
Query: 37 AMSSRIRTTINGEVITDGDIS---KRIAL-LKLQKINGE----LEKIAVQELIVETLKKQ 88
I +N +VIT ++ KR + LK + I L+K +Q LI + L++Q
Sbjct: 53 QFVDGIAAIVNKDVITMREVQDGVKRAKVDLKERGIQLPDDNVLQKQVLQRLIFDRLERQ 112
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E ++ GI D V A L+ + + ++K G+ + +++ L + +
Sbjct: 113 EADRLGIRVDDAQVTQAINMVASRNKLTPQQLRAEVEKNGLSWDDYRKSLREEIRTDRLR 172
Query: 149 KNDFMLKYGNLEMEIPA-------------------NKQKMKNITVREYL-IRTVLFSIP 188
+ + E+ A ++ T L + +L +P
Sbjct: 173 QRTIDNHIIITDAEVDAYLKDQARNPALQPQSAQAPVQEAPAAATGPVMLALGQILVRVP 232
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-- 246
+ + ++ + +RL+ D + +S + G + D P
Sbjct: 233 EGASPDTVASLRKKAEDILARLKRGDDFASVAAASSDGPEALEGGVMGVRPIDGWPDLFV 292
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + + G + + +
Sbjct: 293 KAVSNVPAGQVSGIIQSGNGFHILKVLQRGQ 323
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 11/152 (7%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-D 228
+ V + R +L + + + ++R+ E+ R RL K E A + D
Sbjct: 346 QGPVQVTQTHARHILIKT--SAVMSDQQARQRL---EQVRQRLESGSAKFEDMARQYSQD 400
Query: 229 VS---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIA 283
+ G ++ ++ P F+ + + P + G + + ++R +
Sbjct: 401 ATAPQGGDLGWVNPGEMVPSFEAAMNSLKPGEISQPVESPFGWHLVQVLERRQKDVTDEM 460
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +++++LR+ A I
Sbjct: 461 QRMQARQALFERRAGPAFEDWMEQLRAQAYID 492
>gi|89256873|ref|YP_514235.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. holarctica LVS]
gi|167009233|ref|ZP_02274164.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
FSC200]
gi|290953904|ref|ZP_06558525.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312729|ref|ZP_06803471.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica URFT1]
gi|89144704|emb|CAJ80035.1| Peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
tularensis subsp. holarctica LVS]
Length = 469
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 NGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 86/252 (34%), Gaps = 20/252 (7%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K A Q+ I KK + + + D + + F Q +S S + I +
Sbjct: 216 KKARQKKID-LFKKLALAVNNGSIDFSEIVKQFSQ--APNAVSGGIVSQQVKFDSI-PDI 271
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
+K+Y+ + V F++ + + I +K ++ V +Y + + +
Sbjct: 272 YKEYIK--ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGGM 329
Query: 192 LQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ- 245
++ R K A ES K K + + G +++ E L P
Sbjct: 330 NEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAA 385
Query: 246 FQNLLKKSQNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAE 303
F L + +N + P+ + I ++ E + K +K
Sbjct: 386 FAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQKIYKT 445
Query: 304 YVKKLRSNAIIH 315
++ ++ +A I
Sbjct: 446 WLTSMKDDAYIE 457
>gi|254372525|ref|ZP_04988014.1| hypothetical protein FTCG_00087 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570252|gb|EDN35906.1| hypothetical protein FTCG_00087 [Francisella novicida GA99-3549]
Length = 469
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 DGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 222 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 277
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + + +
Sbjct: 278 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMNEEGAKSS 337
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 338 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAAFAQLKQLK 393
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 394 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 453
Query: 312 AIIH 315
A I
Sbjct: 454 AYIE 457
>gi|208778951|ref|ZP_03246297.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida FTG]
gi|208744751|gb|EDZ91049.1| peptidyl-prolyl cis-trans isomerase [Francisella novicida FTG]
Length = 457
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 43 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 102
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 103 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 162
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 163 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 222
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 223 DGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 282
Query: 268 EYIAI 272
+ I I
Sbjct: 283 QMIYI 287
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 210 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 265
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + ++
Sbjct: 266 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGGMNEDGAKSS 325
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 326 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAAFAQLKQLK 381
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 382 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 441
Query: 312 AIIH 315
A I
Sbjct: 442 AYIE 445
>gi|269467952|gb|EEZ79687.1| parvulin-like peptidyl-prolyl isomerase [uncultured SUP05 cluster
bacterium]
Length = 298
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 117/300 (39%), Gaps = 15/300 (5%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
+ ++ I S S A + I +N ++IT IS I ++ L + I
Sbjct: 4 LLLLIFIWSLNSLASPNSIIAIVNDDLITFDKISSEIKTSSTKEQKLAL----INRQIDL 59
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L+ Q++++ G+ +N +N + A L+ + L + G + L++
Sbjct: 60 ALQLQKVKEVGVIPKNNAINIALKKVASQNNLTLTQLKN-LPQFGEIVENITNQLSL-RG 117
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQ-KMKNITVREYLIRTVLFSIPDNK---LQNQGFVQ 199
VV +K +E+ K ++ I + S D LQ++ +
Sbjct: 118 LKQVVLKKANVKLTQVEISDALKKNSNDSKKLKQQIKIAQIAISSIDQTNSLLQSKDELI 177
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLK-KSQNNT 257
K+ ++ + L K S+ + G++ +L + L P F+ L+ +N
Sbjct: 178 KQFLLDLSDKINNGTSFSSLAKLYSQDPSYKNGGESGWLDKDRLPPIFKQNLQGLKKNEL 237
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ P+ T +G I +KR++ +A + AQ K +VK LR A I +
Sbjct: 238 SKPFKTAQGWRIIKNINKRNVDTHLAS---IKAQLIQKKKNTFFNSWVKGLREKAYIEIF 294
>gi|328676627|gb|AEB27497.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Francisella cf. novicida Fx1]
Length = 469
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIRDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 DGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 82/244 (33%), Gaps = 22/244 (9%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQ 141
K +K + + +++ F + + + S + Q + + +K+Y+
Sbjct: 222 KIDLFKKLALAVNDGSID--FSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIK-- 277
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V F++ + + I +K ++ V +Y + + + + +
Sbjct: 278 ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGSMNEEGAKSS 337
Query: 200 K-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ-FQNLLKKS 253
R K A ES K K + + G +++ E L P F L +
Sbjct: 338 LERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAAFAQLKQLK 393
Query: 254 QNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + P+ + I ++ E + K ++ ++ ++ +
Sbjct: 394 ENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQEIYKTWLTSMKDD 453
Query: 312 AIIH 315
A I
Sbjct: 454 AYIE 457
>gi|326575894|gb|EGE25817.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
CO72]
Length = 434
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 110/285 (38%), Gaps = 25/285 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALL--KLQKIN 69
K + + +VS S + +S I +N E+I ++++ L+ ++QK
Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63
Query: 70 GELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
G + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G+ S +F S
Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVVPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123
Query: 124 L--DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
L ++ G + L + + +N + + +I A ++ + + R
Sbjct: 124 LDAERAG-SYAALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYR 182
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--------IGK 233
+ +P + ++ + A R+ + + +
Sbjct: 183 LLHIRVPY---LDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGAD 239
Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ + L P + K + T+ P VT G++ + + +K+
Sbjct: 240 TGLINATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQ 284
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ +++ NKQ+ + V ++ +L I N+ + + ++ +A +L+
Sbjct: 268 IVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSD---IAEQKINAIYQQLQQ 324
Query: 213 PKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEY 269
D L S + G ++ E D+ P+F+ ++K + + + + P+ +Q G
Sbjct: 325 GADFGTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHI 384
Query: 270 IAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + D + + + + + + +++++LRS+A I Y
Sbjct: 385 LKVNDIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433
>gi|206603473|gb|EDZ39953.1| Putative peptidyl-prolyl cis-trans isomerase [Leptospirillum sp.
Group II '5-way CG']
Length = 340
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/323 (16%), Positives = 111/323 (34%), Gaps = 29/323 (8%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKIN 69
F + + +L+ F + + ++ +N +IT ++ + +A KL K
Sbjct: 8 FPAIFLSATLLLSFLQAGTARGERVLV-DQVMAVVNHHMITKSELDRSLAPTFKKLHKR- 65
Query: 70 GELEKIAVQEL------------IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
A +EL I E L+ +E E+ G+T + +++ + ++
Sbjct: 66 --FRGKAYRELVASLEYKLLMKKINERLELEEAERQGLTVTDDELDHAIESIMQKNNFTS 123
Query: 118 E-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNIT 174
+ + L +QG+ +KQ L Q +V + E+ + K
Sbjct: 124 KWQLKTALSEQGMSYRRYKQQLRKQMTILKLVNQEVRSTVVISPDEVRQYYLAHRDKYRL 183
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN-KLEKFASKIHDVSIGK 233
+R + IP+ + Q ++ + +L+ D + + + G
Sbjct: 184 PPHVTLRDIFLRIPEGATEAQIQEIRKHGEHILRQLKRGDDFVILAGSESEGPNAENGGA 243
Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
L + L P+ Q T+ T G I I + D + L +Q
Sbjct: 244 LGDLTKDQLLPELVQPAFTIPPGQTSGLIQTSNGFYIIKIIKREDNSFRSFKE--LKSQI 301
Query: 293 TPTKIEKHEAE----YVKKLRSN 311
+K + +++KLR
Sbjct: 302 LNDLTKKTTDKRLRIWLEKLREK 324
>gi|315186551|gb|EFU20310.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
thermophila DSM 6578]
Length = 336
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 104/288 (36%), Gaps = 17/288 (5%)
Query: 46 INGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKKQEIEKSGI 95
+NGE + ++ + + Q +L + + LI L QE ++ G+
Sbjct: 50 VNGEEVPSKEVEREVQRYVAQYQQYGMEVSPEEEQKLREQVLDVLIGRLLLLQEAKRMGL 109
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ D V+ Q+ +G S E F + L + G + F++ L+ + VV
Sbjct: 110 SVDQAQVDAQIEQYKLQSG-SEETFKNILAQAGYTEEEFREELSRAFLLQQVVDEKVTKH 168
Query: 156 YGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ E A ++ + + R +L + + + + + +L
Sbjct: 169 LSVSDEEARAYYDENPEQFEQPEQIRARHILIRLAPDASKEEEEAAYAKIHEVQEKLNQG 228
Query: 214 KDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271
D +L K ++ + G + + + P F+ N ++ T+ G+ I
Sbjct: 229 ADFAELAKTYSEGPSAPNGGDLGFFGKGQMVPAFEEAAFALEVNQVSDVVRTEYGLHLIQ 288
Query: 272 ICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ D+++ G + + K + V++L+ A I Y
Sbjct: 289 VTDRQEAGKASFEEVKDQLKEMLLQQKSSEAINALVEELKGKAEIEIY 336
>gi|326562023|gb|EGE12353.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
103P14B1]
gi|326574518|gb|EGE24460.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
101P30B1]
gi|326576358|gb|EGE26267.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
O35E]
Length = 434
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 110/285 (38%), Gaps = 25/285 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALL--KLQKIN 69
K + + +VS S + +S I +N E+I ++++ L+ ++QK
Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63
Query: 70 GELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
G + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G+ S +F S
Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVIPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123
Query: 124 L--DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
L ++ G + L + + +N + + +I A ++ + + R
Sbjct: 124 LDAERAG-SYAALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYR 182
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--------IGK 233
+ +P + ++ + A R+ + + +
Sbjct: 183 LLHIRVPY---LDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGAD 239
Query: 234 AQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ + L P + K + T+ P VT G++ + + +K+
Sbjct: 240 TGLINATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQ 284
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ +++ NKQ+ + V ++ +L I N+ + + ++ +A +L+
Sbjct: 268 IVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSD---IAEQKINAIYQQLQQ 324
Query: 213 PKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEY 269
D L S + G ++ E D+ P+F+ ++K + + + + P+ +Q G
Sbjct: 325 GADFGTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHI 384
Query: 270 IAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + D + + + + + + +++++LRS+A I Y
Sbjct: 385 LKVNDIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433
>gi|261380640|ref|ZP_05985213.1| putative cis-trans isomerase [Neisseria subflava NJ9703]
gi|284796620|gb|EFC51967.1| putative cis-trans isomerase [Neisseria subflava NJ9703]
Length = 329
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 102/299 (34%), Gaps = 27/299 (9%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIA 76
++ +S I ++ EVIT +++ +A + G EL +
Sbjct: 36 VVSATTMPAVQSGVHLSDGIAAVVDNEVITHRQVAQAVAQARQTMPKGTQMDANELRQQV 95
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I ++L Q ++ I + + + SA +Q I
Sbjct: 96 LAQMINQSLILQAGKRRNIQATDSEIEAVIAHNPNIKNPSAA------VRQDIA-----D 144
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM----KNITVREYLIRTVLFSIPDNKL 192
+ ++ + + + + + I KQ+ + VR+Y + +L ++
Sbjct: 145 SIIVEKVRQQAIMQNSRVSDSEVARYIEQAKQQGITLPEADPVRQYHAQHILIKADNDNA 204
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL- 250
R S+ R D L + S+ + G + + + F+ +
Sbjct: 205 AVGAESTIRKI---YSQARSGADFGGLARQYSQDGSAGNGGDLGWFADGMMVAPFEEAVH 261
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKL 308
K + P TQ G I + D R+ G E + + + K ++ +++L
Sbjct: 262 KLKPGQISAPVRTQFGWHIIKLNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLREL 320
>gi|56461330|ref|YP_156611.1| parvulin-like peptidyl-prolyl isomerase [Idiomarina loihiensis
L2TR]
gi|81678272|sp|Q5QVN9|SURA_IDILO RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|56180340|gb|AAV83062.1| Periplasmic parvulin-like peptidyl-prolyl isomerase (two homologous
domains) [Idiomarina loihiensis L2TR]
Length = 432
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 108/314 (34%), Gaps = 15/314 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK------LQ 66
I + VLI + + ++ + R+ ++ V+ I + I +K
Sbjct: 4 IASFCSAAVLIASSFLLNNTVQAQQILDRVVVVVDDGVVLQSQIDQLIQQVKNGQNFNSS 63
Query: 67 KINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ LE A++ LI++ ++ Q + GI D N + + A N L+ + +
Sbjct: 64 NAPSDEVLETQAIERLILQEIQLQMANRMGIEIDDNQLEQAINEIANNQDLTTAELRENM 123
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRT 182
G+ +++ + + + V + + EI + + EY +
Sbjct: 124 VSSGMSWAAYRENIRNELVIQQVQRAAVQQRVSITPQEINNLVKLIESNQEVQTEYRLAQ 183
Query: 183 VLFSIPDNKLQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+L S N Q + K R + + + +S + G ++ +
Sbjct: 184 ILISADSNSSQAELEKAKERANTVLNLLDKGSDFADLAVRSSSGSAALDGGDLGWMTVNG 243
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKI 297
+ F + KS + P + G + + DKR + + ++ + +
Sbjct: 244 MPTLFAEAVDGKSVGDVVGPIRSGIGFHILKVQDKRGEQTVEVQEVKARHILIKPSVILS 303
Query: 298 EKHEAEYVKKLRSN 311
+ E + K R
Sbjct: 304 DNKAKEMLNKYREQ 317
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 6/154 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+K+ + + V+E R +L I + + + ++ + E K +L + S
Sbjct: 276 QDKRGEQTVEVQEVKARHIL--IKPSVILSDNKAKEMLNKYREQIASGEKTFAELAREHS 333
Query: 225 KIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G + + P+F+ ++ Q+ + P+ TQ G + + +R L
Sbjct: 334 ADPGSASRGGDLGWARPNKYAPEFKQKVESIEQDTISEPFSTQFGWHIVEVTGRRTLDAT 393
Query: 282 IALKAYLSAQN-TPTKIEKHEAEYVKKLRSNAII 314
K + Q K + + +++R A I
Sbjct: 394 EENKQERAYQMLFSRKFREELDNWQQEIRDQAFI 427
>gi|285808215|gb|ADC35749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [uncultured bacterium
293]
Length = 392
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 106/290 (36%), Gaps = 19/290 (6%)
Query: 40 SRIRTTINGEVITDGDISKR---------IALLKLQKINGELEKIAVQELIVETLKKQEI 90
R+ ++NG +++ + +R I +++K + +QE I + L Q
Sbjct: 31 ERVIVSVNGGIVSQSEFEQRQIAAVQGARIGPSEVEKYLRDNNARILQEAIDDLLLVQRA 90
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ G + V+ ++ + ++ L ++G+ + ++ + Q V++
Sbjct: 91 SELGFKVPTTYVDETIEGIKKDNNIPSDQDLQDQLRREGMTLSDLRRNIERQVSRRWVLQ 150
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ K + E A QK K EY + + R + R
Sbjct: 151 RELEGKTSVSDAEARAEYQKNKA----EYDKPGTVTLREIVVGGEDAATRAR-AEDVAKR 205
Query: 210 LRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
R +D L K S + G+ L +DL P ++ + T+P KG
Sbjct: 206 ARAGEDFAALAKSTSSAASAKNGGELGQLSHTDLAPDLARIVFALPKGGVTDPVPVAKGF 265
Query: 268 EYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + D+ + G +KA ++ + K Y++ LR A++
Sbjct: 266 RILKVEDRSEGGLVPFEQVKAEITRKLVQEKASGEYDRYIEGLRKXALVD 315
>gi|326570911|gb|EGE20935.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
BC7]
Length = 434
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 114/282 (40%), Gaps = 19/282 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALL--KLQKIN 69
K + + +VS S + +S I +N E+I ++++ L+ ++QK
Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63
Query: 70 GELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
G + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G+ S +F S
Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVIPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123
Query: 124 L--DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYL 179
L ++ G + L + + +N + + +I A ++ +Y
Sbjct: 124 LDAERAG-SYVALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYR 182
Query: 180 IRTVLFSIPDNKLQNQGFVQKRI-KDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY 236
+ + DN Q Q + + +S L + ++ + A D+
Sbjct: 183 LLHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGL 242
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ + L P + K + T+ P VT G++ + + +K+
Sbjct: 243 INATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQ 284
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 68/167 (40%), Gaps = 3/167 (1%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ +++ NKQ+ + V ++ +L I N+ + QK ++ + +
Sbjct: 268 IVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQ-SSDIAEQKINAIYQQLQQGV 326
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIA 271
G ++ E D+ P+F+ ++K + + + + P+ +Q G +
Sbjct: 327 DFGTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHILK 386
Query: 272 ICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ D + + + + + + +++++LRS+A I Y
Sbjct: 387 VNDIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433
>gi|326560318|gb|EGE10706.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
7169]
gi|326566363|gb|EGE16513.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
BC1]
Length = 434
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 114/282 (40%), Gaps = 19/282 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALL--KLQKIN 69
K + + +VS S + +S I +N E+I ++++ L+ ++QK
Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63
Query: 70 GELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
G + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G+ S +F S
Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVVPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123
Query: 124 L--DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYL 179
L ++ G + L + + +N + + +I A ++ +Y
Sbjct: 124 LDAERAG-SYVALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYR 182
Query: 180 IRTVLFSIPDNKLQNQGFVQKRI-KDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY 236
+ + DN Q Q + + +S L + ++ + A D+
Sbjct: 183 LLHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGL 242
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ + L P + K + T+ P VT G++ + + +K+
Sbjct: 243 INATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQ 284
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ +++ NKQ+ + V ++ +L I N+ + + ++ +A +L+
Sbjct: 268 IVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSD---IAEQKINAIYQQLQQ 324
Query: 213 PKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEY 269
D L S + G ++ E D+ P+F+ ++K + + + + P+ +Q G
Sbjct: 325 GADFGTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHI 384
Query: 270 IAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + D + + + + + + +++++LRS+A I Y
Sbjct: 385 LKVNDIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433
>gi|224373789|ref|YP_002608161.1| putative periplasmic protein [Nautilia profundicola AmH]
gi|223588950|gb|ACM92686.1| putative periplasmic protein [Nautilia profundicola AmH]
Length = 270
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/298 (18%), Positives = 104/298 (34%), Gaps = 35/298 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+F + I+S S + +I T+N IT ++ K + LK+ K A+Q L+
Sbjct: 4 ILFVLSLIISLHS-EVIDKIIATVNNIPITSYEVDKLASSLKISKDK------ALQYLLD 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ L + EI+K GI D + + A+ GLS +F + L ++G + +
Sbjct: 57 QKLIQSEIQKRGIDVDDFEIENAMEKIAKQNGLSLFEFKNILMQKG-QYQQLRNKIKDDL 115
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + K + E+ + K+ F I + +
Sbjct: 116 LKEKLFNQIVQTKLKISQDELKNFYENNKD-----------QFKIFSTVQVTKYTANNKK 164
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
E + L K E + +L L K+++ P +
Sbjct: 165 SLNEIKKNPLANANVKTETKVYSYN-------------ELPLGLLFLFKQTKVGEFTPII 211
Query: 263 TQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ ++D I + ++ + K E +Y KL++ A I +Y
Sbjct: 212 NDGLAYSMYYVARKDGSVYIPFEKVKNAIANKLAAQKREMILKDYFNKLKNRAYIKFY 269
>gi|302337922|ref|YP_003803128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
smaragdinae DSM 11293]
gi|301635107|gb|ADK80534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
smaragdinae DSM 11293]
Length = 357
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 9/252 (3%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
EL+ ++ LI + L QE + G D V+ Q S E + L +QGI
Sbjct: 99 AELKGQVLESLIDQELLAQEAKGQGYEADQTKVDQQLQQIKGQFP-SEEQYYQALAQQGI 157
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSI 187
+ F L + V + F + E + + + +LFS+
Sbjct: 158 SEQDFLAELKKSLVVQQFVSDRFASQVAVTEEDSKTYYDDNPSYFVQPERVRASHILFSV 217
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQF 246
++ K ++ R + ++ + L + S G + + + F
Sbjct: 218 AEDASDQDVAAAKTKAESALERYKNGEEFSDLARELSEGPSASQGGDLGFFGRNQMVKPF 277
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEA 302
++ ++P T+ G I + + + G + K +S ++ +
Sbjct: 278 EDAAFSMKVGEVSDPVRTKFGFHLIRLTARNEKGTLPFDQV-KPQISDHLYKLRLGELVK 336
Query: 303 EYVKKLRSNAII 314
++ + + + I
Sbjct: 337 AFLDEQKEKSEI 348
>gi|296113335|ref|YP_003627273.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis RH4]
gi|295921029|gb|ADG61380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis RH4]
gi|326563565|gb|EGE13824.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
12P80B1]
gi|326570173|gb|EGE20218.1| peptidyl-prolyl cis-trans isomerase SurA [Moraxella catarrhalis
BC8]
Length = 434
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 114/282 (40%), Gaps = 19/282 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALL--KLQKIN 69
K + + +VS S + +S I +N E+I ++++ L+ ++QK
Sbjct: 4 KFIIKTLTAAVISCTSLVSQASISGNSHDGIVAVVNDEIILKSELNQATELVATEIQKNG 63
Query: 70 GELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
G + + +A+ ELI E L+ I ++G+ + ++ +Q A++ G+ S +F S
Sbjct: 64 GNVTQDQAQTLALDELINEKLQLAIINRAGVIPNDEVIDQQLLQIAQSQGVNSLSEFQSK 123
Query: 124 L--DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYL 179
L ++ G + L + + +N + + +I A ++ +Y
Sbjct: 124 LDAERAG-SYVALRANLIQDAAIQALWQNQIQSRVRITDDQIDAFLSSPESARLNQVQYR 182
Query: 180 IRTVLFSIPDNKLQNQGFVQKRI-KDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQY 236
+ + DN Q Q + + +S L + ++ + A D+
Sbjct: 183 LLHIRVPYLDNTASEQNRQQAALVAERVKSSLDAGMNLDQAMQNARGDYTPDLQGADTGL 242
Query: 237 LLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ + L P + K + T+ P VT G++ + + +K+
Sbjct: 243 INATALPPAIAAKVDKLTIGQTSTPIVTVNGIDIVKVVNKQQ 284
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ +++ NKQ+ + V ++ +L I N+ + + ++ +A +L+
Sbjct: 268 IVTVNGIDIVKVVNKQQQNQVIVPKWQTSHILARIDSNQSSD---IAEQKINAIYQQLQQ 324
Query: 213 PKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEY 269
D L S + G ++ E D+ P+F+ ++K + + + + P+ +Q G
Sbjct: 325 GADFGTLAATYSDDTGSASQHGSLGWVNEGDMVPEFETMMKNTAKGDFSTPFRSQFGWHI 384
Query: 270 IAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + D + + + + + + +++++LRS+A I Y
Sbjct: 385 LKVNDIKQHDITEQYRRNAAHEYLFLRSAPQAQEDWLQELRSSAYIKIY 433
>gi|88797590|ref|ZP_01113179.1| Parvulin-like peptidyl-prolyl isomerase [Reinekea sp. MED297]
gi|88779762|gb|EAR10948.1| Parvulin-like peptidyl-prolyl isomerase [Reinekea sp. MED297]
Length = 404
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 102/310 (32%), Gaps = 33/310 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGE--- 71
+ T+F + ++S ++A + RI N +VIT+ +++R+ ++ Q +
Sbjct: 1 MQTWFKSALLATSLLMSTLTYAQTLDRIAAVANDDVITELQLAQRVEAVRQQYRSNPNVL 60
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + + +I+E+L+ Q E+ + VN A ++ + + +
Sbjct: 61 PTDDVLTRQVLDAMILESLQMQLAERGNLVIPEQQVNAAIQSIASRQNMTLDQLLAAVQS 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVL 184
G + F++ + + ++ + + + E+ Q +++ EY +
Sbjct: 121 SGQSVSDFREQIRREITLNELQQQIVGRQIFISDAEVERFLKSQSGQSLQETEYQLYYKR 180
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
F + + +A+ RL S + +
Sbjct: 181 FDV------------DQQAEADALVDRLNSG-------ESLLDSPDSRDLGMRTLDQIPS 221
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT--PTKIEKHEA 302
F+ L+ + N + + DK + + L A
Sbjct: 222 IFRTLVPVLEENEAVLLPRDGVLHLAQLADKTEAASVNIEEYQLRHILIKTDQLFNAESA 281
Query: 303 EYVKK-LRSN 311
+ + + LR
Sbjct: 282 QALAEDLRQR 291
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 66/168 (39%), Gaps = 9/168 (5%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + G L + A+K + ++ + EY +R +L + + R+
Sbjct: 238 LPRDGVLHLAQLADKTEAASVNIEEYQLRHILIKTDQLFNAESAQA---LAEDLRQRVLN 294
Query: 213 PKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
+ +L S+ + G+ + + F++ + ++ ++ + + G +
Sbjct: 295 GESMAELADEYSQDNGSRGRGGELGWATLDNYVESFRDAARSTEEGELSDVFRSPYGFHF 354
Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +R D+G + L+ + Q + + + + +LR+ + +
Sbjct: 355 LRVEGQRTRDVGTD-VLRNQIRNQLSQQRYSEALQRWQSELRAESFVE 401
>gi|225076364|ref|ZP_03719563.1| hypothetical protein NEIFLAOT_01408 [Neisseria flavescens
NRL30031/H210]
gi|224952307|gb|EEG33516.1| hypothetical protein NEIFLAOT_01408 [Neisseria flavescens
NRL30031/H210]
Length = 329
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 100/297 (33%), Gaps = 23/297 (7%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIA 76
++ +S I ++ EVIT +++ +A + G EL +
Sbjct: 36 VVSATTMPAVQSGVHLSDGIAAVVDNEVITHRQVAQAVAQARQTMPKGTQMDANELRQQV 95
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ ++I ++L Q ++ I + + + SA +Q I D+ +
Sbjct: 96 LAQMINQSLILQAGKRRNIQATDSEIEAVIAHNPNIKNPSAA------VRQDIADSIIVE 149
Query: 137 YLAIQSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ Q+I + +E + VR+Y + +L ++
Sbjct: 150 KVRQQAIMQ---NSRVSDSEVARYIEQAKQQGVTLPEADPVRQYHAQHILIKADNDNAAV 206
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLL-KK 252
R ++ R D L + S+ + G + + + F+ + K
Sbjct: 207 GAESTIRKI---YTQARSGADFGGLARQYSQDSSAGNGGDLGWFADGMMVAPFEEAVHKL 263
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ P TQ G I + D R+ G E + + + K ++ +++L
Sbjct: 264 KPGQISAPVRTQFGWHIIKLNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLREL 320
>gi|116620640|ref|YP_822796.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|116223802|gb|ABJ82511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
Length = 342
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/332 (14%), Positives = 109/332 (32%), Gaps = 33/332 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
++ + + + + A + ++ IT+ D+ K Q+ G E
Sbjct: 3 RIFVVFAAGVAALTLASCKHSPPA---NVAAEVDNHAITNSDLEKTYQSQYAQQSEGASE 59
Query: 74 KIAVQE-------LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ + +I + + ++ EK G+ V+ + + E+F L
Sbjct: 60 DQILTQKLDLLSSMITQEIMLRKAEKLGLAAVDADVDAEISKM--RAPYTKEEFEKQLSA 117
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK---NITVREYLIRTV 183
Q + + K + + +V + K + ++ K N+ + +
Sbjct: 118 QHMTLDDLKLKVRSKLTVDKLVNKEITSKITITDADVKNFYNNNKAAFNLPEPAIHMAQI 177
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEES--------RLRLPKDCNKLEKFASKIHDVS--IGK 233
L + + K D E RL+ D L + S+ + + G
Sbjct: 178 LVTPFPDPNVRNLKNSKAQNDKEARAKIEDILGRLKRGDDFGMLAQNYSEDANSAPNGGD 237
Query: 234 AQYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG----GEIALK 285
++ +SDL + ++ N + T +G + + K G + ++
Sbjct: 238 MGFVRQSDLEKVNPELRKMVISLPPNGVSPIIPTPEGYRILKVISKEPAGQRELNDPRVQ 297
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ +K + A Y + R++A I Y
Sbjct: 298 QNIRDTLLNSKDQLLRAAYYETARNDAKIQNY 329
>gi|319639633|ref|ZP_07994380.1| peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102]
gi|317399204|gb|EFV79878.1| peptidyl-prolyl cis-trans isomerase [Neisseria mucosa C102]
Length = 329
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 99/303 (32%), Gaps = 23/303 (7%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ 70
+ +S I ++ EVIT + + +A + G
Sbjct: 30 RAAKAPAVSATTMPAVQSGVHLSDGIAAVVDNEVITHRQVEQAVAQARQTMPKGTQMDAN 89
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
EL + + ++I ++L Q ++ I + + + SA +Q I
Sbjct: 90 ELRQQVLAQMINQSLILQAGKRRNIQATDSEIEAVIAHNPNIKNPSAA------VRQDIA 143
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIP 188
D+ + + Q+I + +E + + VR+Y + +L
Sbjct: 144 DSIIVEKVRQQAIMQ---NSRVSDSEVARYIEQAKQQGITLPEADPVRQYHAQHILIKAD 200
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQ 247
++ R S+ R D L + S+ + G + + + F+
Sbjct: 201 NDNAAVGAESTIRKI---YSQARSGADFGGLARQYSQDSSAGNGGDLGWFADGMMVAPFE 257
Query: 248 NLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYV 305
+ K + P TQ G I + D R+ G E + + + K ++ +
Sbjct: 258 EAVHKLKPGQISAPVRTQFGWHIIKLNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLL 317
Query: 306 KKL 308
++L
Sbjct: 318 REL 320
>gi|332283295|ref|YP_004415206.1| survival protein [Pusillimonas sp. T7-7]
gi|330427248|gb|AEC18582.1| survival protein [Pusillimonas sp. T7-7]
Length = 489
Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 91/270 (33%), Gaps = 26/270 (9%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKIN------GELEKIAVQEL 80
S I +N +VIT ++K R+A +LQ+ N L+K +Q +
Sbjct: 35 SAPQQASQQFVDGIAAVVNKQVITLQQVNKEARLAQEQLQRQNIPVPDYAVLQKQVLQRM 94
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQ 136
I+E L++QE E+ GI V+ A ++ + + ++K G +Q
Sbjct: 95 IMEELERQEAERLGIKVSDAQVSQAVQTIAERNRITPKQLRAEIEKTGGKWDDYLQGLRQ 154
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-----------MKNITVREYL-IRTVL 184
+ + V + ++ ++ + + Q + L + +L
Sbjct: 155 EVRTDLLRQRTVDSTIVISDAEVDAFLKSQGQSAPASAPTAPEPAARPAGPQILGLAQIL 214
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLH 243
++P+ Q + + +++ D + +S + G+
Sbjct: 215 VAVPEGASSAQVQALRLKAEDLLKQVQGGADFGGVAAASSDGPQALDGGELGVRPVEGWP 274
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
F + Q + + G + +
Sbjct: 275 DLFIKATQNLQAGQVSGIVQSGNGFHILKV 304
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 5/164 (3%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ PA Q+ + V + R +L ++ + R+ +
Sbjct: 317 PSAPPTTAQQPAPMQQG-PMMVTQTHARHILIKT--TQVMSDEKASNRLAQLRQRLENGE 373
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+ ++++ G +L + P FQ + N + P +Q G I +
Sbjct: 374 SFEDLAKRYSDDATAPQGGDLGWLTPGETVPAFQRAMDALQPNQISQPIQSQFGWHLIQV 433
Query: 273 CDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIH 315
++R E + + Q ++E +++ +LR A I
Sbjct: 434 LERRTKNMENEFRRMQARQLLFQRRVEPAFEDWLSQLRGEAYID 477
>gi|304405097|ref|ZP_07386757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
gi|304345976|gb|EFM11810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
Length = 365
Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 117/314 (37%), Gaps = 18/314 (5%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
+S S + + + +L+I +V +SY + ++NG IT+ + + L+K
Sbjct: 33 SSGSGALGWVVSAALLVILILVATLSYAGDDKGENV-ASVNGVAITEKQLYDALLLIKGG 91
Query: 67 KINGELE--KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
NG+ + ++ + +LI L QE++K G+ ++ + GL E L
Sbjct: 92 GQNGQQKMSEVTLDDLINVELMNQELQKQGLVVAEADIDKELDALKKAYGLDDEKLKQTL 151
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G+ + L Q+ ++ + + +++ NK+ + +L
Sbjct: 152 AQSGMTVADLRPDLEKQAKLRKLLSSKATVTDKDIQDYYDQNKESFSTPE--QVRASHIL 209
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+ +++ A+ + + K + K A G Y + + P
Sbjct: 210 VKTKEEA---DAILKQLKDGADFATIAKEKSLDTGTKDA-------GGDLNYFGKGQMDP 259
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHE 301
F+ + T+ P + G I + D + K + +KI +
Sbjct: 260 AFEKAAFELKVGETSQPVQSAYGFHIIKVTDHKQAASPTFEEKKEDIKNILMMSKINELA 319
Query: 302 AEYVKKLRSNAIIH 315
++++L+S A I
Sbjct: 320 QPFIEELKSKAKIE 333
>gi|88658238|ref|YP_507033.1| SurA domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|88599695|gb|ABD45164.1| surA domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 395
Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/303 (17%), Positives = 110/303 (36%), Gaps = 18/303 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQ 78
+ + + I+ + S +I +N E+I++ D+ KRIA+ K E+IA+
Sbjct: 5 AVRLLVLFIILYSSNVFASVKIVAMVNDELISNLDLEKRIAINKFFYKVEGNTAEEIALN 64
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI E++ +QE K +T + Q L D S+++ QG+ F Q++
Sbjct: 65 ALIDESIWRQEARKLKVTVTERDLLEAIKQFLVIKNLGNIDLKSYVEAQGLDYKLFVQHM 124
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGF 197
+ +W ++ + E+ ++ M N I+ V+ N +
Sbjct: 125 KSKLLWNKILMLKIAPYIIISDKEVQDSRDNMVGNGLDISVHIQEVMLPASMN---DNES 181
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257
+ I +S + + + + V++ L LL +
Sbjct: 182 IISSIISELQSGVSVETIKANRKDVLFEEASVNVKNIDANLA-------NKLLNAKIGDV 234
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK---LRSNAII 314
P ++ G I + + D+ E A Q + EY+ + L++ A
Sbjct: 235 IGPMKSEYGTLIIKLIHRSDINKEFANSNVDLRQM--HLNIEQGKEYLDQISILKTKATC 292
Query: 315 HYY 317
+
Sbjct: 293 ENF 295
>gi|68171990|ref|ZP_00545291.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67998586|gb|EAM85338.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 395
Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/303 (17%), Positives = 110/303 (36%), Gaps = 18/303 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQ 78
+ + + I+ + S +I +N E+I++ D+ KRIA+ K E+IA+
Sbjct: 5 AVRLLVLFIILYSSNVFASVKIVAMVNDELISNLDLEKRIAINKFFYKVEGNTAEEIALN 64
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI E++ +QE K +T + Q L D S+++ QG+ F Q++
Sbjct: 65 ALIDESIWRQEARKLKVTVTERDLLEAIKQFLVIKNLGNIDLKSYVEAQGLDYKLFVQHM 124
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGF 197
+ +W ++ + E+ ++ M N I+ V+ N +
Sbjct: 125 KSKLLWNKILMLKIAPYIIISDKEVQDSRDNMVGNGLDISVHIQEVMLPASMN---DNES 181
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257
+ I +S + + + + V++ L LL +
Sbjct: 182 IISSIISELQSGVSVETIKANRKDVLFEEASVNVKNIDANLA-------NKLLNAKIGDV 234
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK---LRSNAII 314
P ++ G I + + D+ E A Q + EY+ + L++ A
Sbjct: 235 IGPMKSEYGTLIIKLIHRSDINKEFANSNVDLRQM--HLNIEQGKEYLDQISILKTKATC 292
Query: 315 HYY 317
+
Sbjct: 293 ENF 295
>gi|241759093|ref|ZP_04757204.1| peptidyl-prolyl cis-trans isomerase [Neisseria flavescens SK114]
gi|241320695|gb|EER56948.1| peptidyl-prolyl cis-trans isomerase [Neisseria flavescens SK114]
Length = 329
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 98/293 (33%), Gaps = 23/293 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQEL 80
+S I ++ EVIT +++ +A + G EL + + ++
Sbjct: 40 TTMPAVQSGVHLSDGIAAVVDNEVITHRQVAQAVAQARQTMPKGTQMDANELRQQVLAQM 99
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I ++L Q ++ I + + + SA +Q I D+ + +
Sbjct: 100 INQSLILQAGKRRNIQATDSEIEAVIAHNPNIKNPSAA------VRQDIADSIIVEKVRQ 153
Query: 141 QSIWPDVVKNDFMLK--YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q+I + +E + VR+Y + +L ++
Sbjct: 154 QAIMQ---NSRVSDSEVARYIEQAKQQGVTLPEADPVRQYHAQHILIKADNDNAAVGAES 210
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R S+ R D L + S+ + G + + + F+ + K
Sbjct: 211 TIRKI---YSQARSGADFGGLARQYSQDSSAGNGGDLGWFADGMMVAPFEEAVHKLKPGQ 267
Query: 257 TTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ P TQ G I + D R+ G E + + + K ++ +++L
Sbjct: 268 ISAPVRTQFGWHIIKLNDVREAGTPEERQQNAVRQYLSQQKAQQATTNLLREL 320
>gi|206900652|ref|YP_002251221.1| foldase protein PrsA [Dictyoglomus thermophilum H-6-12]
gi|206739755|gb|ACI18813.1| foldase protein PrsA [Dictyoglomus thermophilum H-6-12]
Length = 355
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/325 (14%), Positives = 106/325 (32%), Gaps = 31/325 (9%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---- 66
K+L FV I V+ M + ING ++ + R+ +K Q
Sbjct: 5 SIFKILFIVFVAIFILGGAFVALVYHQMKNYPVLKINGMPVSRQEYKDRLNFIKTQYSIM 64
Query: 67 -------KINGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
++ +E I + + + E +K GI+ V + +
Sbjct: 65 FGVDFTTTQGQKMLSQVKEETIKDIARWKIVQAETKKRGISVSEKEVETRLKEIEKEFP- 123
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
S F L + G N FK+ L + ++ + E EI + +
Sbjct: 124 SVLQFEITLSQYGYDRNTFKEELRKNLLMRKLMD-EIGKDEKVTEDEIKKYYNENIKLFE 182
Query: 176 --REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
+EY + ++ ++ ++ + +++ K + S G
Sbjct: 183 HPKEYKVYSIFIK-------DEKKAKEVYNELLSNKITFTDAAKKYSE--DTTTKDSGGD 233
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSA 290
++ + L + + + N + P T +G + + ++ KA +
Sbjct: 234 LGFITQGTLPEEVEKVTFTLPLNQISKPIKTDEGYYITKVTEIKEAYTTPYFQAKAEIED 293
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K K +++++ S A I
Sbjct: 294 KLLYDKRSKVFNKWLEEQVSKAKIE 318
>gi|254369748|ref|ZP_04985758.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica FSC022]
gi|157122707|gb|EDO66836.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica FSC022]
Length = 469
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N IT ++ + +A L+ + N L++ A+Q+LI +++ Q E++ I
Sbjct: 55 VAIVNSRPITSFELDQELAKLEAMQPNSAFNTDPLKLKRQALQDLISQSVLLQLAERNNI 114
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ + +K+ + Q + + + +
Sbjct: 115 MISNQQLDSAIQDIAAKNGVSVESLKLNVEAAGMSFDSYKKRIIDQLMISQLQQQAIAQQ 174
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 175 VYVSPEEIQKYIKKHQKEFDREMSPVKLYTLKNLIVALPDSKKARQKKIDLFKKLALAVN 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNN-TTNPYVTQKGV 267
+++F+ + VS G ++ D + ++ +K+ +N+ + P++ +
Sbjct: 235 NGSIDFSEIVKQFSQAPNAVSGGIVSQQVKFDSIPDIYKEYIKELKNHQVSQPFIVNHTL 294
Query: 268 EYIAI 272
+ I I
Sbjct: 295 QMIYI 299
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 86/252 (34%), Gaps = 20/252 (7%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K A Q+ I KK + + + D + + F Q +S S + I +
Sbjct: 216 KKARQKKID-LFKKLALAVNNGSIDFSEIVKQFSQ--APNAVSGGIVSQQVKFDSI-PDI 271
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT--VREYLIRTVLFSIPDNK 191
+K+Y+ + V F++ + + I +K ++ V +Y + + +
Sbjct: 272 YKEYIK--ELKNHQVSQPFIVNHTLQMIYIDNIDEKAPILSKKVTKYYVYAIEIKLDGGM 329
Query: 192 LQNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE----SDLHPQ- 245
++ R K A ES K K + + G +++ E L P
Sbjct: 330 NEDGAKSSLERAKLAIESGQEFTKVALKYNQDYDHPN----GNFRWVSELDSPPSLPPAA 385
Query: 246 FQNLLKKSQNNTTNPYVTQ-KGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAE 303
F L + +N + P+ + I ++ E + K +K
Sbjct: 386 FAQLKQLKENELSEPFQADGRTWMIIKYTKTKEYDAAEQLKEQKALEAIFSEKAQKIYKT 445
Query: 304 YVKKLRSNAIIH 315
++ ++ +A I
Sbjct: 446 WLTSMKDDAYIE 457
>gi|293603514|ref|ZP_06685936.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
gi|292818100|gb|EFF77159.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
Length = 335
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 89/278 (32%), Gaps = 40/278 (14%)
Query: 37 AMSSRIRTTINGEVITDGDIS----KRIALLKLQKIN----GELEKIAVQELIVETLKKQ 88
I ++ +VIT ++ + + LK + I L+ +Q LI+E +++
Sbjct: 58 QFVDGIAAVVDKDVITLRELRDASVRISSELKSRGIQVPDDQTLQHQVLQRLIMERVQRH 117
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E ++ GI D V+ A +S + ++K G G + +++ L + +
Sbjct: 118 EADRLGIRVDDAQVDQAIQTIAARNKISVAQLRAEIEKSGAGWDAYRKSLREEIRTDRLR 177
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVR------------------------------EY 178
+ + E+ A + + Y
Sbjct: 178 QRAVDSNIVISDTEVDAFLKDQRRNPAFGAAPQAQPEPQPQAQPQPAPEQAAAPSGPMLY 237
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ +L +P+ Q ++ + +R + D L +S + G +
Sbjct: 238 ALAQILVRVPEGSSPEQLAALRKKAEDVLARAKRGDDFASLAAASSDGPEALQGGVMGVR 297
Query: 239 ESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICD 274
D P + + + + + G I + D
Sbjct: 298 PLDGWPDLFVKAISNLQKGQVSGLIQSGNGFHIIKVMD 335
>gi|225850985|ref|YP_002731219.1| ppic-type ppiase domain protein [Persephonella marina EX-H1]
gi|225646600|gb|ACO04786.1| ppic-type ppiase domain protein [Persephonella marina EX-H1]
Length = 325
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 113/313 (36%), Gaps = 19/313 (6%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWA------MSSRIRTTINGEVITDGDISKRIALL------ 63
+ + ++ I + +Y+ + +++ + IT+ ++ + + +L
Sbjct: 1 MFKVIIFLLGLITSVYAYEGFGWNIDPSTKNKVVAKVGDVEITEMEVQRMMKILLPMNFY 60
Query: 64 ---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
++ E+ + A+Q LI L E +K G+ +N Q + S E+
Sbjct: 61 HRNITEEKLKEIREKAIQNLIYRELLYYEAKKKGLKVTEKEINNLMDQLIKQYK-SKENL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L + G+ FK+ L + + ++K ++ + +++ K K K +
Sbjct: 120 EKLLKQTGLTIEGFKKELEKRLLVDKLIKKYAIVSLTDKDLKEYYEKNKDKFKEPASVKV 179
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
R + + + + + +++ K A + + +++ + + G Y+ +
Sbjct: 180 RYIYIKVDPSDPKGREKAREKAKKAYKEIKEGKDFGDVAYRYSDDLSRIKGGDIGYVHKG 239
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
Q + + K + T G+ + I DKR + + + E
Sbjct: 240 RFPKQIEEEIYKLDVGQVSKIIETDTGLHIVKIEDKRPP--RLVPYEEIKDKLKKELTEV 297
Query: 300 HEAEYVKKLRSNA 312
+ +L +A
Sbjct: 298 MQERKFNELIKDA 310
>gi|302343059|ref|YP_003807588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus
baarsii DSM 2075]
gi|301639672|gb|ADK84994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus
baarsii DSM 2075]
Length = 317
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/307 (13%), Positives = 106/307 (34%), Gaps = 20/307 (6%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL----QKING 70
+L++ ++ + S+ ++ E I+ +++ A + L + ++
Sbjct: 8 FFALACLLLVSTAAALLVACDRSGSTAWVAAVDDEKISLHQFNQKAAFMGLGADAKSLDA 67
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L K + E+I + ++ K G+ ++ + + G+ A F + +G+
Sbjct: 68 GLRKAVLDEMIQRLVILRQAAKLGVELSDQELDSEEERI--HHGMDAAAFREGMLARGMD 125
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ LA + + + + EI A + K+ R I + +PD
Sbjct: 126 YQDWRDELARDLLVRKTIDLVLTPRISVDQSEIVAYYDEHKDQFSRPEQILALHLVLPD- 184
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-L 249
K++ D +R+ +D K +L + + + +
Sbjct: 185 ---------KKMADELVARMDRGQDMLAAAKEMGVALGSDGRP-DWLGRGHMPGKLEKAV 234
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKK 307
P+ + G + + +KR +A + K + ++++
Sbjct: 235 FAARPGRPAGPFHSDYGYHVVWVIEKRPAMVLPLAEAAGRIQDALAKEKKDALTVGWLEE 294
Query: 308 LRSNAII 314
L+S + I
Sbjct: 295 LKSESKI 301
>gi|317050626|ref|YP_004111742.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum
indicum S5]
gi|316945710|gb|ADU65186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum
indicum S5]
Length = 319
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/319 (12%), Positives = 110/319 (34%), Gaps = 21/319 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +++ + + + I +NG IT ++ + + G
Sbjct: 1 MKKIGFSLFIVLCGAALSAALSAATLVDGIAAVVNGVPITIQEVRQANKEHIERATRGLA 60
Query: 73 EKIAVQ-----------ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
++ A + + + + L + ++ I + V Q A N +S
Sbjct: 61 DEQAREATMQMLLEGTHQKVEQMLLEDYGRRNRIFISAQQVEEAINQVAANNNVSRSALE 120
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
S L +GI +++ + +Q + + + E+E+ + ++ + + +
Sbjct: 121 SMLADEGISMESYRRDIRVQLLVMQ-IGQKLSQEISVSELEVVSAFREGRFQRIPYADVG 179
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLES 240
VL ++ + +R+ + + + + + S+ + + G +
Sbjct: 180 HVLIALDGKSDDQAIRIAERLHE---RIISGDIEFEEAARQYSEGPNAAEGGLMKDVRRG 236
Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKI 297
L + + + T + G + + D R++ E + A K
Sbjct: 237 RLLRELDQAIFSMEKGQTTLVRSSVGYHILHLYDLGFNREMSDEDFSR--TRAALLREKQ 294
Query: 298 EKHEAEYVKKLRSNAIIHY 316
E+ + +LR +A+I Y
Sbjct: 295 ERRLQGLMDELRDSAVIQY 313
>gi|262378424|ref|ZP_06071581.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens
SH164]
gi|262299709|gb|EEY87621.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens
SH164]
Length = 441
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 100/281 (35%), Gaps = 25/281 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQ------ 66
K +F +V S +S+A + ++ VI D+ + +A LK Q
Sbjct: 9 KYFKQFFKATALALVISSSMQSFAQPVDEVVAIVDNGVILKSDLIQGVAELKHQLETQKR 68
Query: 67 --KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
LEK A+ +LI+ + +++ + + D ++N ++ A +G + E F
Sbjct: 69 EVPPQAFLEKQALDQLILRQAQLEQVRRYNVKPDEKSLNEAVMKVASQSGTKTLEAFQQK 128
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLI 180
LD + +A + + M + + ++ + + + +
Sbjct: 129 LDAMAPGTYESLRNRIAEDLAINRLRQQQVMSRIKISDQDVENFLKSPQGQAALGSQVHV 188
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG----KAQY 236
+ D + N V +++K+A N ++ + + D + +
Sbjct: 189 IHARITPKDKQTANVESVAQQVKNA-------LNTSNDIQAISKQYSDTKVQVEGVDMGF 241
Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+D+ + + TT + GV + + +++
Sbjct: 242 RSLADIPAELAARVSALPVGQTTELIPARDGVHVLKVLERK 282
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 7/166 (4%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ G +++ K + V +Y R +L + K + D +RL+
Sbjct: 269 ARDGVHVLKVLERKTSEQKALVPQYQTRHILIQPSEVVSPENA---KHMIDNIYNRLKAG 325
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F+ +K + + P+ TQ G +
Sbjct: 326 EDFTVLASTFSTDTGSARDGGSLGWVSPGVMVPEFEEKMKSTPVGQVSAPFQTQFGWHIL 385
Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ D R E + + E ++++LR+NA +
Sbjct: 386 QVTDTRQQDMTEEYQERMARQILGERQFETELDSWLRELRANAYVE 431
>gi|313669248|ref|YP_004049532.1| peptidyl-prolyl cis-trans isomerase [Neisseria lactamica ST-640]
gi|313006710|emb|CBN88180.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria lactamica
020-06]
Length = 359
Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 93/289 (32%), Gaps = 23/289 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT +++ +A K +Q + L + + +L+ ++L Q +
Sbjct: 81 FSDGIAAVADNEVITRRRLAQAVADAKANLPKGVQISDTALTEQVLMQLVNQSLIVQAGK 140
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I ++ V++N
Sbjct: 141 RRNIQATEAEIDAVVAQNPALKNLSPAQRREL--ADNIIAEKVREQ--------AVMQNS 190
Query: 152 FMLKYGNLEMEIPANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + A KQ + R+Y + +L R +
Sbjct: 191 RVSEAEVDRFIEQAQKQGITLPEGEPLRQYRAQHILIKADGENAAVGAESTIRK--IYDQ 248
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
+++ + G + + + F+ + + P TQ G
Sbjct: 249 ARNGTDFSGLARQYSQDAGAGNGGDLGWFSDGVMVAPFEAAVHALKPGQVSAPVRTQFGW 308
Query: 268 EYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K E+ AE ++ L S A I
Sbjct: 309 HIIKLNEVRDAGTPEERIRNSVRQYIFQQKAEQATAELLRDLHSGAYID 357
>gi|217967894|ref|YP_002353400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dictyoglomus
turgidum DSM 6724]
gi|217336993|gb|ACK42786.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dictyoglomus
turgidum DSM 6724]
Length = 355
Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 53/327 (16%), Positives = 107/327 (32%), Gaps = 35/327 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---- 66
K+L FV I V+ M + ING ++ + R+ +K Q
Sbjct: 5 SIFKILFIVFVAIFILGGAFVALVYHQMKNYPVLKINGMPVSRQEYKDRLNFMKTQYSIM 64
Query: 67 -------KINGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+L E I + + + E +K GI+ V+ + +
Sbjct: 65 FNVDFTTTEGQKLLPKVKDETIKDLARWKIVQTEAKKRGISISEKEVDTRLKEIEKEFP- 123
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
S F L + G N FK+ L + ++ + E EI + +
Sbjct: 124 SVLQFEMTLAQYGYDRNTFKEELRKNLLMRKLID-EIGKDEKVTEDEIKKYYNENIKLFE 182
Query: 176 --REYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFA-SKIHDVSI 231
+EY + ++L +KR K+ E + +K++
Sbjct: 183 HPKEYKVYSILIK-----------DEKRAKEVYNELTSNKITFTDAAKKYSEDTTTKDKG 231
Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYL 288
G+ ++ + L + + + N + P T +G + + ++ KA +
Sbjct: 232 GELGFITQGTLPEEVEKITFTLPLNQISKPIKTNEGYYITKVTEVKEAYTTPYFQAKAEI 291
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K K ++++ S A I
Sbjct: 292 EDKLLYDKRAKVFNKWLEDQVSKAKIE 318
>gi|149179628|ref|ZP_01858140.1| peptidyl-prolyl isomerase [Planctomyces maris DSM 8797]
gi|148841534|gb|EDL55985.1| peptidyl-prolyl isomerase [Planctomyces maris DSM 8797]
Length = 217
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 9/159 (5%)
Query: 44 TTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGIT 96
+NG VIT D+ +R+ALL + ++ LI ETL+ Q E I
Sbjct: 59 AVVNGYVITGTDLDQRLALLVNANQTEIPAEELQRVRAQVLRNLIDETLQIQAAEAEEIV 118
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V F + A ED ++L G K+ + + W +++
Sbjct: 119 ISDAEVEQTFARVAAQNNQRPEDMENYLASIGSSSASLKRQIRGELAWQRLLRQKVSFFV 178
Query: 157 GNLEMEIPANKQKMKNITVR-EYLIRTVLF-SIPDNKLQ 193
E+ ++++ EY + + + P+N
Sbjct: 179 NVSAEEVNELMERLEAAKGTDEYWLWEIFMSATPENDAA 217
>gi|255320532|ref|ZP_05361713.1| chaperone SurA [Acinetobacter radioresistens SK82]
gi|255302504|gb|EET81740.1| chaperone SurA [Acinetobacter radioresistens SK82]
Length = 436
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 100/281 (35%), Gaps = 25/281 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQ------ 66
K +F +V S +S+A + ++ VI D+ + +A LK Q
Sbjct: 4 KYFKQFFKATALALVISSSMQSFAQPVDEVVAIVDNGVILKSDLIQGVAELKHQLETQKR 63
Query: 67 --KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
LEK A+ +LI+ + +++ + + D ++N ++ A +G + E F
Sbjct: 64 EVPPQAFLEKQALDQLILRQAQLEQVRRYNVKPDEKSLNEAVMKVASQSGTKTLEAFQQK 123
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLI 180
LD + +A + + M + + ++ + + + +
Sbjct: 124 LDAMAPGTYESLRNRIAEDLAINRLRQQQVMSRIKISDQDVENFLKSPQGQAALGSQVHV 183
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG----KAQY 236
+ D + N V +++K+A N ++ + + D + +
Sbjct: 184 IHARITPKDKQTANVESVAQQVKNA-------LNTSNDIQAISKQYSDTKVQVEGVDMGF 236
Query: 237 LLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+D+ + + TT + GV + + +++
Sbjct: 237 RSLADIPAELAARVSALPVGQTTELIPARDGVHVLKVLERK 277
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 7/166 (4%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ G +++ K + V +Y R +L + K + D +RL+
Sbjct: 264 ARDGVHVLKVLERKTSEQKALVPQYQTRHILIQPSEVVSPENA---KHMIDNIYNRLKAG 320
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F+ +K + + P+ TQ G +
Sbjct: 321 EDFTVLASTFSTDTGSARDGGSLGWVSPGVMVPEFEEKMKSTPVGQVSAPFQTQFGWHIL 380
Query: 271 AICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ D R E + + E ++++LR+NA +
Sbjct: 381 QVTDTRQQDMTEEYQERMARQILGERQFETELDSWLRELRANAYVE 426
>gi|118602546|ref|YP_903761.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|118567485|gb|ABL02290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 298
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 62/304 (20%), Positives = 120/304 (39%), Gaps = 22/304 (7%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ C + ++ + I +N +++T IS I + + V + I
Sbjct: 5 LLLICAFSLNAFTIP---NSIIAIVNDDLVTFDQISVDIK----SNHTKVQKLVLVNQQI 57
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L+ Q+I++ IT N +N A N L+ L K +H KQ L+++
Sbjct: 58 DLILQLQKIKQLNITPKENAINSMLGNIASNNNLNLMQL-QSLPKFDEVIDHVKQSLSLE 116
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ +V+N L E+EI K N + + + ++ Q ++ +
Sbjct: 117 GLRQFIVEN---LDIKLTEVEIIKQLIKTPNHSNKLTQQIKIAQIAVNSIDQVDSLLRSK 173
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIH----DVS---IGKAQYLLESDLHPQFQNLLKK-S 253
++ + L + NK + F++ D S GK+ +L L F+ LK S
Sbjct: 174 DSLIKDFLIDLSEKINKGDSFSTLAKLYSQDASYKNGGKSDWLNLLKLPEIFKQNLKNLS 233
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + P+ + + I DKR + + L + K + +++KKLR A
Sbjct: 234 VGDLSQPFKIGQVWRIVKIIDKRSVDNYLI---ELKTKLIRQKENIYFNDWIKKLRKEAY 290
Query: 314 IHYY 317
I +
Sbjct: 291 IEIF 294
>gi|251772781|gb|EES53343.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum
ferrodiazotrophum]
Length = 382
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 98/298 (32%), Gaps = 22/298 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIA--LLKLQKI-NGELEKIAVQEL--------IVETLKKQ 88
I +N IT ++ + + K+ G V L I E L+ +
Sbjct: 70 DSIMAVVNHHSITKSEVDRELKPTFEKIHATYQGPAYMQLVASLEYNVMMKKINERLELE 129
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
E ++ G++ + V++ + + + L QG+ +++ L Q +
Sbjct: 130 EADRLGLSVTDDEVDHAIDDIMQKNNIQERWQLKNALASQGLTFRQYRKKLKKQLTVMKL 189
Query: 148 VKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
V + E+ K + + + + ++P+N Q ++ +
Sbjct: 190 VNQEVRSTVVISPEEVRDYFLKHRDEYRLPAHVSLADIFLALPENPTPAQIAEVRKKGEH 249
Query: 206 EESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT 263
++ D + + S G L + L P+ T+ T
Sbjct: 250 VLRQIGRGDDFEMLAGSESQGPNAESGGALGNLTKDQLLPELIGPAFSVPVGKTSGLIQT 309
Query: 264 QKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+G I + + +I K + T EK +++KLR+++ + Y
Sbjct: 310 DRGFYIIKVLAREAQPYQKFDDI--KQTILNTLTKKTTEKRLRLWLEKLRAHSYVAIY 365
>gi|162449311|ref|YP_001611678.1| peptidyl-prolyl cis-trans isomerase SurA [Sorangium cellulosum 'So
ce 56']
gi|161159893|emb|CAN91198.1| peptidyl-prolyl cis-trans isomerase SurA [Sorangium cellulosum 'So
ce 56']
Length = 338
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 100/315 (31%), Gaps = 31/315 (9%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIA----------VQE 79
+S RI + I D+ +R LL++Q + A +Q+
Sbjct: 21 PLAHAVVSERIVAVVGDRAILLSDLRQRARPFLLQIQARVPPGAQQAAAESQVFRDLLQK 80
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYL 138
++ E L+ Q EK+ + S + F A ++ E+ F + G+ + ++ +
Sbjct: 81 MVDEELEGQAAEKANVRVTSEEIENAFRNIAAAEQMTVEELFRTARASSGLTEQEYRDEI 140
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM--KNITVREYLIRTVLFSIPDNKLQNQG 196
Q + +++ + E ++ + ++ + R+Y ++ +
Sbjct: 141 RRQILEGKMLQLRVKGRVRITEQDVRSAFDRLVREERRRRDYHPAWIVLRVLPGSSAEAV 200
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE-----------SDLH 243
++ + A R R +D L + S G +
Sbjct: 201 EERRALAAALAERARGGEDFAALARQFSDDTATREEGGDLGVRAPQGTQAAVTGQRQVMA 260
Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKH 300
P+ L+ P + + ++ A + + + + K
Sbjct: 261 PELEAALMAIEPGGVAGPMRAGDAFVIMKLLSRQPSRFTTLEAARPEVLQRLQAEIMTKA 320
Query: 301 EAEYVKKLRSNAIIH 315
+ +++ L+ +
Sbjct: 321 KQKWLDDLKRGTHVE 335
>gi|163784187|ref|ZP_02179121.1| hypothetical protein HG1285_05540 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880547|gb|EDP74117.1| hypothetical protein HG1285_05540 [Hydrogenivirga sp. 128-5-R1-1]
Length = 288
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 103/281 (36%), Gaps = 31/281 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+I +N + ++ L + N +K A Q+LI L QE K GI
Sbjct: 28 DKIVIIVNDRPVLKSEVE-----LAKKWFNISSDKEAAQKLIDHILLYQEARKKGIKVMP 82
Query: 100 NTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ + ++ + S E+F L KQGI N F + + V F++K
Sbjct: 83 QEIKAAIERISKANKVSSIEEFKKLLQKQGIAYNEFYDLIKREIAINKYV--QFVIKPKI 140
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLF--SIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
LE A ++ + +R + PD K + + K+ EE + D
Sbjct: 141 LENSKEAVEETYRK-------VRIIYLDKKDPDFKNKYEIIKNNLTKNTFEELAKKYSDD 193
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
++ G + + ++ N + S+ T KG+ +I I
Sbjct: 194 SITAKE---------GGLLGKIKKGEVVDYLDNAVWSSKVGEIKKVKTDKGIYFIYI--- 241
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + ++ ++ K+ + +KKLR A+I Y
Sbjct: 242 -ESEEKKFVPKDINTKDIINKLNEEMKLLIKKLREKAVIEY 281
>gi|296313516|ref|ZP_06863457.1| SurA/PPIASE domain protein [Neisseria polysaccharea ATCC 43768]
gi|296839936|gb|EFH23874.1| SurA/PPIASE domain protein [Neisseria polysaccharea ATCC 43768]
Length = 332
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 93/300 (31%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT+ +++ +A K Q EL + + +L
Sbjct: 43 AAPAQQQGGIRFSDGIAAVADNEVITNRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 102
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ Q+ LS I +Q +
Sbjct: 103 VNQSLVVQAGKRRSIQASEAEIDAVVAQNPSLKNLSPTQRREL--ADNIIAEKVRQQAVM 160
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 161 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 213
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256
R E R D + +++ + G + + + P F+ ++
Sbjct: 214 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEETVRSLKPGQ 270
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P TQ G I + + R+ G + + K E+ A+ ++ L S A +
Sbjct: 271 VSAPVRTQFGWHIIKLNEVREAGTPQERVRNAVRQYIFQQKAERATADLLRDLHSGAYVD 330
>gi|225850929|ref|YP_002731163.1| SurA N- domain family [Persephonella marina EX-H1]
gi|225645389|gb|ACO03575.1| SurA N- domain family [Persephonella marina EX-H1]
Length = 286
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/308 (17%), Positives = 114/308 (37%), Gaps = 33/308 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+++L + +L++ + +S + +I +NG+ + +I L + +
Sbjct: 1 MRVLLSLILLVMMVVSSAISEEKLL--DKIVLVVNGKPVLKSEIE-----LAKEWYGVKS 53
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGD 131
+K A ++LI + + Q EK GI V+ ++ AR L S +F L+++G+
Sbjct: 54 DKEAAKKLIDQIILAQAAEKVGIHATPTEVDNAILRLARMNRLGSVNEFKKRLEERGLVF 113
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ FK + + + V E A +R + D
Sbjct: 114 SLFKDLIKREIVISKFVHIYLKRNLFEGIEEGKA------------VDLRKIRLIYLDKS 161
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF-QN 248
+ +K + +KL K S + G + + DL +
Sbjct: 162 KPGFNEKYEILKKLVN-----KEPFDKLAKEYSDDPVTAEKGGLLGEVKKGDLVKTLDKP 216
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + + T KGV +I I + + + + + K++K Y+KKL
Sbjct: 217 IWEHKVGDIFE-IDTDKGVYFIKI----ESEEKKIVHQEPTGEEVNKKLQKEVELYLKKL 271
Query: 309 RSNAIIHY 316
+ NA++ Y
Sbjct: 272 KENAVVEY 279
>gi|320109145|ref|YP_004184735.1| SurA domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319927666|gb|ADV84741.1| SurA domain protein [Terriglobus saanensis SP1PR4]
Length = 360
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/340 (14%), Positives = 116/340 (34%), Gaps = 41/340 (12%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEK 74
+ +LI + ++ + + ++NG+ I D+ + + + + Q E
Sbjct: 12 SAGSLLIAGTLSLALTGCHPTHGADVVASVNGKAIPRADLDRFYQSQMAQNQNQQPVNED 71
Query: 75 IA-------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
A ++ LI E + +Q K +T + V+ + + E F+ L
Sbjct: 72 QADSARLTILRSLIDEEIIQQRAAKMNLTASNEDVDAKVTEM--KAPYTEEQFNERLKAS 129
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVL 184
+ K+ + + ++ + K + ++ A + N+ +Y + VL
Sbjct: 130 NHTLDDMKREIRRSLTFDKLLNKEINSKINITDGDVSSYYAAHKSEYNLMETQYHLGQVL 189
Query: 185 FSIPDNKLQNQGFVQKRIKDAEE--------SRLRLPKDCNKLEKFASKIHDVS--IGKA 234
+ + K DAE +R+ +D + + S+ + G
Sbjct: 190 VTSFPSPQAVNLQSSKATNDAEAKKKIQTLKNRIDSGEDFSAIAMNFSENPQTAQNGGDM 249
Query: 235 QYLLESDLHPQ---FQNLLKKSQNNTTN----------PYVTQKGVEYIAICDK----RD 277
++ ES LH + + K T+ P G + + + +
Sbjct: 250 GFISESQLHTDILSYTAVTKLKAGQVTDILPVFDQPASPSKKVVGYVILKLISRDAAGQR 309
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
L + A++ + Q + + Y + LR+ + + Y
Sbjct: 310 LLTDPAVQQNIRQQLHDARSTLLKNAYFEMLRNQSKVENY 349
>gi|169633358|ref|YP_001707094.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii SDF]
gi|169152150|emb|CAP01052.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii]
Length = 441
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 106/278 (38%), Gaps = 20/278 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQKI 68
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 9 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 68
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 69 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128
Query: 124 LDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
LD I + + +A + + M + + ++ + +
Sbjct: 129 LDA--IAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQA 186
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ I + Q V K ++ S+L D N L+KF++ V + S
Sbjct: 187 HVIHMRISGDNPQEVQNVAKEVR----SQLAQNNDLNALKKFSTATVKVEGADMGFRPLS 242
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
D+ + + Q TT+ + GV + + +++
Sbjct: 243 DIPAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQ 280
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 95/299 (31%), Gaps = 63/299 (21%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-------------- 116
L ++L + L++Q++ I V+ F L
Sbjct: 139 NLRSRIAEDLAINRLRQQQVMSR-IKISDQDVDNFLKSPQGQAALGNQAHVIHMRISGDN 197
Query: 117 -------AEDFSSFLDKQGIGDNHFKQYLAI-------QSIWPDV------VKNDFMLKY 156
A++ S L + N K++ + + +
Sbjct: 198 PQEVQNVAKEVRSQLAQNN-DLNALKKFSTATVKVEGADMGFRPLSDIPAELAARITPLQ 256
Query: 157 GNLEMEIPA------------NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++ + KQ + V +Y R +L + K+I D
Sbjct: 257 DGQTTDLISVRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIID 313
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY 261
+ RL+ +D L S + G ++ + P+F +++ + P+
Sbjct: 314 SIYKRLKAGEDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPF 373
Query: 262 VTQKGVEYIAICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
TQ G + + DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 374 QTQFGWHILQVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 428
>gi|319789892|ref|YP_004151525.1| SurA domain protein [Thermovibrio ammonificans HB-1]
gi|317114394|gb|ADU96884.1| SurA domain protein [Thermovibrio ammonificans HB-1]
Length = 282
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 98/277 (35%), Gaps = 21/277 (7%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
I +NG+ I D+ + + ++A+ LI + + GI+
Sbjct: 25 IAAVVNGQPILYSDVVRFARENHI-----NNLRVALDRLIEREILLTQARSEGISVSDKE 79
Query: 102 VNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ ++ AR G S E+F L+K+GI + ++ + Q I ++ D K +
Sbjct: 80 LKTALLELARKNGFKSLEEFKKALEKEGIPFSRVEESVKDQLIVAKLIARDVRSKVKVSD 139
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+E+ K +K E R V + N+ + ++ ++ + +
Sbjct: 140 IELD--KLCLKVEGKPE---REVYYIYTKNRADAEKAMELLANGVPFQKVARELSQDPMT 194
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
+ G Y+ L ++ + + + G + + ++
Sbjct: 195 AQ-------NGGYLGYVSPGMLVKPLDRVVWSIKPGSYRLVRLKDGYYIVYVKGEKRGQC 247
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ L Q + +K EY++ L+ +A + Y
Sbjct: 248 N---REKLREQLFAQRFQKALKEYIENLKRSASVKVY 281
>gi|255066985|ref|ZP_05318840.1| SurA/PPIASE domain protein [Neisseria sicca ATCC 29256]
gi|255048810|gb|EET44274.1| SurA/PPIASE domain protein [Neisseria sicca ATCC 29256]
Length = 331
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 98/291 (33%), Gaps = 35/291 (12%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIVETLKKQEIEK 92
S I + EVIT ++ IA + Q EL + + +L+ ++L Q ++
Sbjct: 54 SDGIAAIADNEVITQRQLAHAIAEARQHLPKGTQISEDELRQQVLAQLVNQSLIIQAGKR 113
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
I ++ Q SA+ ++ +A I V +
Sbjct: 114 RNIQATDAEIDAVIAQTPSLKNPSAQT---------------RREIADTIIMEKVRQQAV 158
Query: 153 MLKYGNLEMEI-----PANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
M + E+ A +Q + R+Y + +L ++ R
Sbjct: 159 MQNSRVSDAEVNSFIERARQQGVALPEGEPMRQYSAQHILIKADNDNAAAGAESTIRKIY 218
Query: 205 AEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYV 262
A+ R D L + S+ S G + + + F+ + K + P
Sbjct: 219 AQA---RSGADFAGLARQYSQDGSANSGGDLGWFADGMMVAPFEEAVHKLKPGQISPPVR 275
Query: 263 TQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
TQ G I + D RD G E + + + K ++ A ++ L S A
Sbjct: 276 TQFGWHIIKLNDVRDAGTPEERQRNAVRQYMSGQKAQQATANLLRDLHSGA 326
>gi|296131722|ref|YP_003638969.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola sp. JR]
gi|296030300|gb|ADG81068.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola potens
JR]
Length = 352
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/329 (16%), Positives = 118/329 (35%), Gaps = 32/329 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---------- 65
++ + ++ ++ + + ++ +NGE IT + KR+ +KL
Sbjct: 1 MSKFRKILGLALILVFAVVVAGCGAKTVAEVNGEKITQEQLDKRVNKMKLAYEQQGASFE 60
Query: 66 ----QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+++ ++K + ++I + L KQ EK G+ V F + + S ++F
Sbjct: 61 GEQGKQMLEAIKKQTLDQMIDQLLIKQAAEKEGVAPSDAEVQKRFDEIKKRFK-SEKEFE 119
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYL 179
L + K+Y+ Q D + E ++ ++K +
Sbjct: 120 DALKNYNYTEEELKEYI-AQQAMTDALFQKVTKDVKVTEEDMKKYYEERKDSFKEPEKIK 178
Query: 180 IRTVLFS--IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIG 232
R +L + K+ + K++ + ++L D +L K S+ +
Sbjct: 179 ARHILIKFDTANEKVGRKEEEAKKMAEELIAKLNNGADFAELAKEKSEDPGSKNDGGLLK 238
Query: 233 KA---QYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEI--ALK 285
Y + +F + + T P TQ G I + DK+ + K
Sbjct: 239 DPMGSDYFARGVMVKEFDDAAFALKKGEITKKPVKTQFGYHIIKVEDKKPEKQKTYEEAK 298
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ T+ ++ +Y++ L+ A I
Sbjct: 299 EQIKRDLPNTRKQEVFNKYIEGLKQKAKI 327
>gi|304389108|ref|ZP_07371152.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis ATCC
13091]
gi|304336981|gb|EFM03171.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis ATCC
13091]
Length = 348
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 59 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 118
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 119 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 176
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 177 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 229
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 230 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 286
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A I
Sbjct: 287 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYID 346
>gi|148264649|ref|YP_001231355.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
gi|146398149|gb|ABQ26782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
Length = 326
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/323 (13%), Positives = 108/323 (33%), Gaps = 19/323 (5%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIR-TTINGEVIT----DGDISK--RIA 61
+S+ I+ + + +P + + ++ +NG I+ +G++ + R
Sbjct: 1 MSNAIQAGLRLTLTVAMLSLPAAPVPAEETARQLNCAVVNGAPISREECNGELERLKRSR 60
Query: 62 LLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--TGLSA 117
++L E+++ A+ LI L QE K GI + V+ + +
Sbjct: 61 SVRLFSPALLKEIQQEALDNLIRRELIYQESRKGGIGVAATAVDEELARLKTRFANEM-- 118
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR- 176
+FSS L + + + + + F + + E + + R
Sbjct: 119 -EFSSALSSLHVSEASLRNIVERGIAVRTYIDRQFAGQSTVTDEEKKGYYRSHPDTFKRP 177
Query: 177 -EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ I +L + + +K+I+ E + ++ G
Sbjct: 178 LQVRISHILVRTGGMTGKARAEAEKKIEGIREKVGKGESFDALARAYSECGSKEQGGDLG 237
Query: 236 YLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQN 292
+ ++ ++ ++ T+ + G+ I + D++ + A + +S
Sbjct: 238 FFRRGEMARVVEDAVMDLKVGETSGIVEDRFGLHLIRLTDRKPEQVIAYEAAEGKISEYL 297
Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315
K + Y LR A +
Sbjct: 298 KQEKAMEKANRYAGDLRKKARVE 320
>gi|116748015|ref|YP_844702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter
fumaroxidans MPOB]
gi|116697079|gb|ABK16267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter
fumaroxidans MPOB]
Length = 353
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 98/292 (33%), Gaps = 19/292 (6%)
Query: 43 RTTINGEVITDGD-------ISKRIALLKLQKING---ELEKIAVQELIVETLKKQEIEK 92
+NG VIT + +++A+ E++K + L+ + KQ+ K
Sbjct: 61 VAVVNGTVITRAEYESETKRFERQMAMSGQAPDGAQVAEMKKKVLDGLVGREVLKQQAAK 120
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G+ D V+ + + ++F L + + K ++
Sbjct: 121 LGVKVDPAEVDKEIATLKQRFP-NEDEFKKALKNLNLTEESLKAQFTQDLGIRKMIDEQV 179
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIR--TVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
K E + ++R VL + K A + ++
Sbjct: 180 ASKITITPEETKKFYDGNPELFKTPEMVRASHVLIKVDPKAGDADKAKAKERITAAQKKV 239
Query: 211 RLPKDCNKLEKFASK-IHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVE 268
+ +D K+ K S+ G + + P Q + ++ TQ G
Sbjct: 240 QAGEDFAKVAKEVSECPSAAKGGDLDFFQRGQMVGPFEQAAFALKVGSVSDIVETQFGYH 299
Query: 269 YIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
I + DK++ G + ++ ++ + A+Y+++L++ A I +
Sbjct: 300 VIKVTDKKEAGVMKYDEIKDR-IAQHLKQDRVNQQLAKYIEELKAQAKIEIF 350
>gi|299136387|ref|ZP_07029570.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp.
MP5ACTX8]
gi|298600902|gb|EFI57057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp.
MP5ACTX8]
Length = 635
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/301 (18%), Positives = 105/301 (34%), Gaps = 18/301 (5%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GELEKIAVQE 79
VP + + + +N ++IT + + L + + +++
Sbjct: 65 VPTPITPNGTVVEDVIARVNDQIITRSEYLRSEQQLLQEAQQQSASPADFESRRRDLLRD 124
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYL 138
+I E L + ++ GIT D+ T+ + + L S E +QG+ FKQ +
Sbjct: 125 MIDEQLLLSKGKELGITGDAETI-RELDEIRKRNHLDSMEALEKAASQQGVSFEDFKQGI 183
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVRE-YLIRTVLFSIPDNKLQNQG 196
+I VV+ + + A K+ V E + +L + PDN Q
Sbjct: 184 RNNAIRQQVVQEEVSRHLNMTHAQEDAYYAAHGKDFEVPEQIHLSEILVTTPDNATDAQV 243
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQ 254
+ D E++L+ L K +S + G L +N +
Sbjct: 244 AAAQAKADDLEAKLKAGTSFADLAKSSSGGPTAAAGGDLGDFKRGSLGDVLENATFPLPE 303
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T P T++G + + DK G L + + ++ Y+ K R +
Sbjct: 304 GGFTAPIRTRQGFVILRV-DKHQAAGIPPLADIEPQVQQAIYLDALQPALRAYLTKARQD 362
Query: 312 A 312
A
Sbjct: 363 A 363
>gi|261364046|ref|ZP_05976929.1| SurA/PPIASE domain protein [Neisseria mucosa ATCC 25996]
gi|288568080|gb|EFC89640.1| SurA/PPIASE domain protein [Neisseria mucosa ATCC 25996]
Length = 328
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/290 (18%), Positives = 96/290 (33%), Gaps = 27/290 (9%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEK 92
S I + EVIT +++ + + G EL + + +LI ++L Q ++
Sbjct: 51 SDGIAAIADNEVITRRQLAQAVERARRTIPKGTQIGDNELREQVLAQLINQSLIVQAGKR 110
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
I D+ + A N L I + + + V
Sbjct: 111 KNIQADNAEIEAV---IAANPSLKTP-------SASIRRE-IADSIIAEKVRQQAVMQHS 159
Query: 153 MLKYGNLEMEIPANKQKM----KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + I KQ+ + +R+Y + +L + R A+
Sbjct: 160 RVSDAEVARAIEQAKQQGIALPEGEPLRQYNAQHILIKADNENAAAGAESTIRKIYAQA- 218
Query: 209 RLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
R D L + S+ S G + + + P F+ + K + P TQ G
Sbjct: 219 --RSGADFAGLARQYSQDGSASSGGNLGWFADGMMVPPFEEAVHKLKPGQVSPPVRTQFG 276
Query: 267 VEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D RD G E + + K E+ E +++L A I
Sbjct: 277 WHIIKLNDVRDAGTPEERQHNTIRQYLSRQKAEQAEINLLRELHEGAHID 326
>gi|251794480|ref|YP_003009211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
JDR-2]
gi|247542106|gb|ACS99124.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
JDR-2]
Length = 392
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 105/304 (34%), Gaps = 24/304 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K ++ ++ ++ + + T+NG IT K L Q L+
Sbjct: 74 KAWIAVSAILAIVLIIVLIKPPFGAGDKAVATVNGAKITK---DKLYDSLVEQGGKSTLD 130
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ELI Q + +T V+ ++ G S ++F+ L + G+ +
Sbjct: 131 NMITTELID-----QAAADAKVTVTEADVDKEIENLKKSFG-SEDEFNQTLAQYGMTVDS 184
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
++ +Q +++ + +++ ANK M + +L + +
Sbjct: 185 LREDAEVQVKIRKILEPQVKVTDDDIKAYYDANKASMSTPE--QIRASHILVATKEEA-- 240
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKK 252
+ +++ A+ + L K + K + G + + + P F++
Sbjct: 241 -EDILKQLKAGADFATLAKEKSTDTGTKD-------NGGDLNFFGKGSMEPAFEDAAFAL 292
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ + T G I D++ K + Q K+ + + ++ L++
Sbjct: 293 KKGELSGVVQTSYGYHIIKKTDEKAAVTPTLEEKKEDIKYQLVTQKVSELSSTWMADLKA 352
Query: 311 NAII 314
A I
Sbjct: 353 KAKI 356
>gi|260550086|ref|ZP_05824300.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624]
gi|260406841|gb|EEX00320.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624]
Length = 441
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 105/279 (37%), Gaps = 20/279 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQK 67
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 8 AKHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEATHELQSQK 67
Query: 68 INGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSS 122
++ + +LI+ + +++++ GI D ++N ++ A +G S E F
Sbjct: 68 KEVPPQQYLQFQVLDQLILRQAQLEQVKRYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQ 127
Query: 123 FLDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
LD I + + +A + + M + + ++ + +
Sbjct: 128 KLDA--IAPGTYENLRGRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQ 185
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ I + Q V K ++ S+L D N L+K ++ V +
Sbjct: 186 AHVIHMRISGDNPQEVQSVAKEVR----SKLAQSNDLNALKKLSTATVKVEGADMGFRPL 241
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
SD+ + + Q TT+ + GV + + +++
Sbjct: 242 SDIPAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQ 280
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 266 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 322
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 323 EDFATLAATYSNDTGSARDGGSLGWVNPGMMVPEFDKKMQEIPVGQISEPFQTQFGWHIL 382
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 383 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 428
>gi|108760198|ref|YP_628739.1| putative foldase protein PrsA [Myxococcus xanthus DK 1622]
gi|108464078|gb|ABF89263.1| putative foldase protein PrsA [Myxococcus xanthus DK 1622]
Length = 349
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/318 (11%), Positives = 106/318 (33%), Gaps = 29/318 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRI----ALLKLQ 66
+ + + V + + M + + ++NGEV++ D + + AL +
Sbjct: 24 RAFLVPLAIALAAGVGMPACTKPVMETPEALVVASVNGEVLSRADFEQELWRELALTDVS 83
Query: 67 KIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ ++ + I L QE K +T V+ ++ + A +F+
Sbjct: 84 QRTLEDVEPFKRALLDTYIHRMLLLQEARKHNVTVTPEEVDRGVLRLSG--DYPAGNFNE 141
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLI 180
L + + + A + + + + E E+ A + +
Sbjct: 142 VLAQGQLSMAELRSREASRLTIEKLFASHVYSRVAVTEEELRAWYGAHEKDFHEPEQVHA 201
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
++ D + Q ++ K A+ +R +++ G +
Sbjct: 202 AQIVVKGLDEARRLQTQLKSGKKFADLAR-----------RYSLSADAKVGGDLGFFPRG 250
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKI 297
+ P F ++ K ++ T+ G + +++ + +++ + + K
Sbjct: 251 QMPPAFDEVVFKLGVGQVSDVVSTEYGFHLFRVLERKPARKREFVEVRSLVEGKLLEQKR 310
Query: 298 EKHEAEYVKKLRSNAIIH 315
+ + + ++LR A +
Sbjct: 311 SQAQETFEQELRQKAQVQ 328
>gi|169796158|ref|YP_001713951.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AYE]
gi|260555208|ref|ZP_05827429.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC
19606]
gi|169149085|emb|CAM86962.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AYE]
gi|260411750|gb|EEX05047.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC
19606]
Length = 441
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 20/278 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQKI 68
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 9 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 68
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 69 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128
Query: 124 LDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
LD I + + +A + + M + + ++ + +
Sbjct: 129 LDA--IAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQA 186
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ I + Q V K ++ S+L D N L+K ++ V + S
Sbjct: 187 HVIHMRISGDNPQEVQNVAKEVR----SQLAQSNDLNALKKLSTATVKVEGADMGFRPLS 242
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
D+ + + Q TT+ + GV + + +++
Sbjct: 243 DIPAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQ 280
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 266 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 322
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 323 EDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 382
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 383 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 428
>gi|56416400|ref|YP_153474.1| hypothetical protein AM041 [Anaplasma marginale str. St. Maries]
gi|254994626|ref|ZP_05276816.1| hypothetical protein AmarM_00174 [Anaplasma marginale str.
Mississippi]
gi|56387632|gb|AAV86219.1| hypothetical protein AM041 [Anaplasma marginale str. St. Maries]
Length = 401
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 94/275 (34%), Gaps = 27/275 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---ALLKLQKINGEL 72
+ Y + V + S+ +A S RI+ ++G+ IT D+S+R A G
Sbjct: 1 MLRYLLCCCALCVILASHHCYASSVRIKAVVDGKAITSLDVSRRTKANAFFYKTAHAGSD 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNY----FFVQHARNTGLSAEDFSSFLDKQG 128
+ +Q L+ E++ + E ++ GI+ + F GLS + + + G
Sbjct: 61 QGEVLQSLVDESVLELEAKELGISVGKRELEAEASKMFSVLGVCDGLSVGE---CVAQNG 117
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSI 187
+ + +L + IW ++ + ++ + K+ + V
Sbjct: 118 LDYKSVEDHLRSRVIWSKILATRVAPFLAVSDSDVENYVDEAKSAGLETVLDLEQVFVPF 177
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---GKAQYLLESDLHP 244
+ + + A L+K AS+ + ++ + L
Sbjct: 178 KAGNVLDSVLSELNKGVA-------------LDKIASRYREHAVYADRAVGVTASAFLPD 224
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+L+K P +G + + +K +
Sbjct: 225 VKISLVKAKVGQVIGPIRIDRGYLVLKLLNKVKVS 259
>gi|213157107|ref|YP_002319152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acinetobacter
baumannii AB0057]
gi|215483612|ref|YP_002325833.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii
AB307-0294]
gi|301345175|ref|ZP_07225916.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB056]
gi|301511287|ref|ZP_07236524.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB058]
gi|332851812|ref|ZP_08433737.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150]
gi|332865808|ref|ZP_08436592.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113]
gi|193077182|gb|ABO11972.2| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC
17978]
gi|213056267|gb|ACJ41169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acinetobacter
baumannii AB0057]
gi|213989120|gb|ACJ59419.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii
AB307-0294]
gi|332729819|gb|EGJ61154.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150]
gi|332735020|gb|EGJ66105.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113]
Length = 436
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 104/276 (37%), Gaps = 16/276 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQKI 68
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
LD + + +A + + M + + ++ + +
Sbjct: 124 LDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ I + Q V K ++ S+L D N L+K ++ V + SD+
Sbjct: 184 IHMRISGDNPQEVQNVAKEVR----SQLAQSNDLNALKKLSTATVKVEGADMGFRPLSDI 239
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ + Q TT+ + GV + + +++
Sbjct: 240 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQ 275
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 261 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 317
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 318 EDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 377
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 378 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 423
>gi|184157913|ref|YP_001846252.1| parvulin-like peptidyl-prolyl isomerase [Acinetobacter baumannii
ACICU]
gi|332872750|ref|ZP_08440716.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059]
gi|183209507|gb|ACC56905.1| Parvulin-like peptidyl-prolyl isomerase [Acinetobacter baumannii
ACICU]
gi|323517858|gb|ADX92239.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
TCDC-AB0715]
gi|332739047|gb|EGJ69908.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059]
Length = 436
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 104/276 (37%), Gaps = 16/276 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQKI 68
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
LD + + +A + + M + + ++ + +
Sbjct: 124 LDAIAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHV 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ I + Q V K ++ S+L D N L+K ++ V + SD+
Sbjct: 184 IHMRISGDNPQEVQNVAKEVR----SQLAQSNDLNALKKLSTATVKVEGADMGFRPLSDI 239
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ + Q TT+ + GV + + +++
Sbjct: 240 PAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQ 275
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 261 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 317
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 318 EDFAILAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 377
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 378 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 423
>gi|261400512|ref|ZP_05986637.1| SurA/PPIASE domain protein [Neisseria lactamica ATCC 23970]
gi|269209772|gb|EEZ76227.1| SurA/PPIASE domain protein [Neisseria lactamica ATCC 23970]
Length = 358
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 96/290 (33%), Gaps = 25/290 (8%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT +++ +A K +Q + EL + +L+ ++L Q +
Sbjct: 80 FSDGIAAVADNEVITRRRLAQAVADAKANLPKDVQIGDEELTGQVLMQLVNQSLIVQAGK 139
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ + LSAE + + + V +
Sbjct: 140 RRNIQASEAEIDAAAAQNPQLKHLSAEQ-----------RRELADSIIAEKVRQQAVMQN 188
Query: 152 FMLKYGNLEMEI-PANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ ++ I A KQ + R+Y + +L R +
Sbjct: 189 SRVSEAEVDRFIEQAQKQGITLPEGEPLRQYRAQHILIKADGENAAVGAESTIRK--IYD 246
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
+++ + G + + + F+ + + P TQ G
Sbjct: 247 QARNGTDFSGLARQYSQDAGAGNGGDLGWFSDGVMVAPFEAAVHALKPGQVSAPVRTQFG 306
Query: 267 VEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K E+ AE ++ L S A I
Sbjct: 307 WHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAEQATAELLRDLHSGAYID 356
>gi|78222035|ref|YP_383782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
gi|78193290|gb|ABB31057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
Length = 339
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/333 (15%), Positives = 109/333 (32%), Gaps = 27/333 (8%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------RTTINGEVITDGDISKRI 60
T+ I L + + K+ A + +NG IT ++ R
Sbjct: 6 TARRQIIALSAIALLAGTAGANAAPTAKADAKAGEAPSATTAVARVNGVDITRAELE-RA 64
Query: 61 ALLKLQKINGEL-----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
+ L + E+ A+ +LI + L Q +K I + +H
Sbjct: 65 KKIILSRNQMASAAMNDEMSKKVEEAALNQLIAKELLFQAGKKQEIKDLDKKIQEKVAEH 124
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
S D+ L + + + + + + ++++ + + E
Sbjct: 125 KARFK-SQADYEKALKEMDMTEKEVETFTREDMVIGNLIETKIVANTKITDDEAKKFYND 183
Query: 170 MKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKI 226
K+ RE +L S + K +A +L+ D + +K +S
Sbjct: 184 NKDKFRREEAVRASHILVSADQKASPEEKKKAKEKAEALLKQLKGGADFAELAKKESSCP 243
Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEI 282
G + + + P+F + ++ TQ G I + +K+D + E
Sbjct: 244 SSAQGGDLGFFGKGQMVPEFEKTAFNLKPGEVSDVVETQFGYHIIKLAEKKDAETVPFEE 303
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A + + T K++ EYV +LR +
Sbjct: 304 AKERIVQF-LTQQKVQAGIGEYVDELRKKGKVE 335
>gi|15643674|ref|NP_228720.1| basic membrane protein, putative [Thermotoga maritima MSB8]
gi|4981448|gb|AAD35993.1|AE001755_16 basic membrane protein, putative [Thermotoga maritima MSB8]
Length = 329
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 52/331 (15%), Positives = 109/331 (32%), Gaps = 51/331 (15%)
Query: 23 IIFCIVPIVSYKSWAMS----SRIRTTINGEVIT------DGDISK--------RIALLK 64
+IF I+ ++ + + S + +NGE IT + DI +
Sbjct: 4 LIFVILAVLGISLFGQATTTSSTVVAIVNGEPITSDLLELEADIDGILRSIAQIDMRFFN 63
Query: 65 LQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QHARNT 113
+ E ++ + LI + L +Q EK G+ V + +
Sbjct: 64 VLTGTEEGLKLLLKYKQEVLNSLIDDLLIQQLAEKEGVGVSDEEVKKEVEARLKETVESM 123
Query: 114 GLSAEDFSSFLDKQGIG-DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
G++ ED FL G G FK+ L W L L+ +I N
Sbjct: 124 GITLEDLDKFLQSAGYGDLETFKKRLH----W----HVKTQLSLQRLQEKITQNATVTLE 175
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-RLRLPKDCNKLEKFASKIHDVSI 231
Y + IP + + + K E ++R +D ++ +
Sbjct: 176 EAQNYYNQNKETYRIPAAVHLYRITTEDKSKMDEVLSKIRKGEDFLEVATQV-----ATG 230
Query: 232 GKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYL 288
G ++ E L ++++ + P+ ++ + +KR + +K +
Sbjct: 231 GDLGWIEEGKLEKDIESVIFDAPEGAILGPFESEGKFVLYKVVEKRSSSYKKFEEVKQEI 290
Query: 289 SAQNTPTKIEKHEAEY----VKKLRSNAIIH 315
+ K + ++ ++ + N+ I
Sbjct: 291 MDKLLADKRNQLWNDWFNKVFEEFKKNSHIE 321
>gi|258513569|ref|YP_003189791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
acetoxidans DSM 771]
gi|257777274|gb|ACV61168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
acetoxidans DSM 771]
Length = 327
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 56/301 (18%), Positives = 109/301 (36%), Gaps = 35/301 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK---------------LQKINGELEKIAVQELIVET 84
+ + T+NGE IT + KR++++K QK+ ++ + E+I +T
Sbjct: 22 TNVVATVNGEEITQQQLDKRVSIVKDYYEKQYGQKIEGQDAQKLIDNMKPGLLDEMISDT 81
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
LK+QE K G + + + E F +FL +Q + + +
Sbjct: 82 LKRQEARKVGKDMTDQQIQEKIDGVKKQFP-NEEAFKNFLAQQDLTEKDM-----AYMLN 135
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
V + E++ ++ K + T +Y +R +L S + N + +
Sbjct: 136 LQDVVLKDVKAPTEEEVQEYYDQNKEQFKTAEQYEVRHILISTDPDDAGNVKHTE---AE 192
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSI-------GKAQYLLESDLHPQFQN-LLKKSQNN 256
AE+ +++ D + FA+ + S G + D P+F+ L
Sbjct: 193 AEKLAVQVLADIKNGKDFAALAREKSEDLGSKDNGGLYTFKKGDTVPEFEKAALALKPGE 252
Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAI 313
T P TQ G I + + + + Q + Y++ L+ A
Sbjct: 253 YTREPVKTQFGYHIIKLEKLIPARDQSFAEVKDGIKQQLDQEAKKNKFNAYLEDLKKKAK 312
Query: 314 I 314
I
Sbjct: 313 I 313
>gi|57168199|ref|ZP_00367338.1| probable periplasmic protein Cj1289 [Campylobacter coli RM2228]
gi|305431656|ref|ZP_07400825.1| SurA domain protein [Campylobacter coli JV20]
gi|57020573|gb|EAL57242.1| probable periplasmic protein Cj1289 [Campylobacter coli RM2228]
gi|304445251|gb|EFM37895.1| SurA domain protein [Campylobacter coli JV20]
Length = 271
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 36/298 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ V +S + I ++ E IT DI + + L + + A+ LI
Sbjct: 4 ILLSFVFFISLTHANTINAIAVVVDKEPITTYDIEQTMKTLNI------PKNQALGILIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ +I++ GI ++ + +S EDF L +G F+
Sbjct: 58 EKMELSQIKQFGIYTSELELDNAIGKMLAQNKISLEDFKRDLQAKGQNYEQFRSNFKKDF 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + A K +N + N Q+ ++
Sbjct: 118 EKRKLYE-KIASTAKTDFSDEGAKKFFEQNKNKFTLFTEINVNIYRSNNAQDLENIKATT 176
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
K A K EK ++ L S + + +
Sbjct: 177 KTA-----------LKAEKATLTPNNSDPRLLG--LLSSIP----------IGSFSPVLN 213
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316
+QKG E + DK GG+ + + + + + +Y KLRS I Y
Sbjct: 214 SQKGYEIYQVKDK--NGGQTPEYYQIKNEILNAYVSEQRQNYIQDYFDKLRSKINIEY 269
>gi|57505879|ref|ZP_00371804.1| probable periplasmic protein Cj1289 [Campylobacter upsaliensis
RM3195]
gi|57015909|gb|EAL52698.1| probable periplasmic protein Cj1289 [Campylobacter upsaliensis
RM3195]
Length = 272
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 100/303 (33%), Gaps = 46/303 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ ++ V+ + + + + + E IT+ DI + + LLKL + A+ LI
Sbjct: 4 ILMILLFFVAIVNAKVLNSVALVVEKEPITNYDIEQTMKLLKL------PREQALAVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ +I++ I + ++ + ++ E F + L +G F+ L
Sbjct: 58 EKMELSQIKQFSIVVNELELDTAISKILTQNKMNLEQFKNSLKAKGQNYELFRHNLKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + + +++ K +E + + + +Q ++K
Sbjct: 118 ------EKRKLYEKIASMNKTDFSEESAKKFFEANKEKFLFYTSIDVKIYRSSDQVILEK 171
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
D + K + H+ L + +
Sbjct: 172 MKTDKKII--------LKAQNVNLNPHNAD------------PRLLALLSQLKIGEFSPV 211
Query: 261 YVTQKGVEYIAICDKR-------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+++G E + K + + + Y + + + +Y KLRS
Sbjct: 212 LNSKEGFELYEVMAKSGANVPEFEQIKDSVMNVYF-----NEQRQNYIQDYFDKLRSKLN 266
Query: 314 IHY 316
I Y
Sbjct: 267 IEY 269
>gi|167626495|ref|YP_001676995.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167596496|gb|ABZ86494.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 470
Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 98/246 (39%), Gaps = 17/246 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N + IT ++ + +A + N + + A+Q+LI +++ Q E++ I
Sbjct: 56 VAIVNSKPITSFELDQEVAKFEAMNPNSNFHSDSLQVRREALQDLIAQSVLLQLAERNNI 115
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ +K+ + Q + + + +
Sbjct: 116 IISNQQLDAAIKDIAAKNGVSVESLKLNVEASGMSFESYKKRIREQLMVSQLQQQAISQQ 175
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 176 VYVSPEEIQKYIKKHQEQFDREMAPIKLYTLKNLIVALPDSKKARQKKIDLFKKLAIAV- 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
+ D +++ K S+ + + G + + +++ + ++ + P++
Sbjct: 235 NKGYIDFSEVVKQFSQAPNATYGGIVSQQVKFDSIPSMYRDYVKDLKEHQVSEPFIVNHT 294
Query: 267 VEYIAI 272
++ I I
Sbjct: 295 LQMIYI 300
>gi|269958291|ref|YP_003328078.1| hypothetical protein ACIS_00053 [Anaplasma centrale str. Israel]
gi|269848120|gb|ACZ48764.1| hypothetical protein ACIS_00053 [Anaplasma centrale str. Israel]
Length = 403
Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 95/272 (34%), Gaps = 21/272 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---ALLKLQKINGEL 72
+ Y V V +VS+ +A S RI+ ++G+ IT D+S+R A G
Sbjct: 1 MLRYLVYCCTLCVVLVSHNCYASSVRIKAVVDGKAITSLDVSRRAQANAFFYKTAHAGSD 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGD 131
+Q L+ E++ + E ++ G++ + + + G+ E D + G+
Sbjct: 61 RNEVLQSLVDESMLELEAKELGMSVSKHELEAEAGKLFSVLGVCDELDIGECAAQNGLDY 120
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSIPDN 190
+ +L + IW ++ + ++ + K+ + V
Sbjct: 121 KSVENHLRSRVIWSKMLAARVAPFLAVSDSDVENYVDEAKSAGLETVLDMEQVFVPFKAG 180
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---GKAQYLLESDLHPQFQ 247
++ + + A L+K A++ + ++ + L
Sbjct: 181 RVLDSVLSELNKGVA-------------LDKIAARYREHAVYADRAVGVTASAFLPDVKA 227
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+L++ P +G + + K +G
Sbjct: 228 SLVRAKVGQVIGPVRIDRGYLVLKLLSKVKVG 259
>gi|218768937|ref|YP_002343449.1| putative rotamase [Neisseria meningitidis Z2491]
gi|121052945|emb|CAM09299.1| putative rotamase [Neisseria meningitidis Z2491]
Length = 347
Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 58 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 117
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 118 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 175
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 176 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 228
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 229 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 285
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 286 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 345
>gi|197124850|ref|YP_002136801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
gi|196174699|gb|ACG75672.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
Length = 317
Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 98/313 (31%), Gaps = 21/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------Q 66
+ + L C + + +NGE I +++ + + Q
Sbjct: 5 LAPILIATALAAGCGRCGAARSGERPAPGAVAVVNGEPIAPDAVARELRDAQAGAEGQGQ 64
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + + +L+ L Q+ I + V F++ + F L +
Sbjct: 65 ATGDVLRRRVLDDLVDRALLLQQARARSIVVGQDQVERAFLRLRAEYPGT--HFDDLLAQ 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + K L Q V+ F + + A ++ E+ +
Sbjct: 123 ERLSQAELKARLKDQLT----VERLFEQEVFPQVQVVDAEVERYYAEHGAEFQEPERVHV 178
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYL-LESDLHP 244
+ + Q R E+ R R P+ ++ + +S + S G + +
Sbjct: 179 LQIVVASREEATQVR----EKLR-RNPQTFAEVARRSSIAPEGKSGGDLGLIGRGAGFPE 233
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302
F N ++ + G + +K+ +A ++ + K +A
Sbjct: 234 VFDTCFSLPVNVISDVTPSPYGFHLFKVVEKKPAQRRTLEQARAEIAEKLGREKRAGAQA 293
Query: 303 EYVKKLRSNAIIH 315
EY++ LR A I
Sbjct: 294 EYLEALRKRAQID 306
>gi|319411235|emb|CBY91642.1| peptidyl-prolyl cis-trans isomerase SurA [Neisseria meningitidis
WUE 2594]
Length = 360
Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 71 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 130
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 131 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 188
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 189 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 241
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 242 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 298
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 299 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 358
>gi|220919568|ref|YP_002494872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219957422|gb|ACL67806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 317
Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 98/313 (31%), Gaps = 21/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------Q 66
+ + L C + + +NGE I +++ + + Q
Sbjct: 5 LAPILIATALAAGCGRCGGARSGERPAPGAVAVVNGEPIAPDAVARELRDAQAGAEGQGQ 64
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + + +L+ L Q+ I + V F++ + F L +
Sbjct: 65 ATGDVLRRRVLDDLVDRALLLQQARARSIVVGQDQVERAFLRLRAEYPGT--HFDDLLAQ 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + K L Q V+ F + + A ++ E+ +
Sbjct: 123 ERLSQAELKARLKDQLT----VERLFEQEVFPQVQVVDAEVERYYAEHGAEFQEPERVHV 178
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYL-LESDLHP 244
+ + Q R E+ R R P+ ++ + +S + S G + +
Sbjct: 179 LQIVVASREEAAQVR----EKLR-RNPQTFAEVARRSSIAPEGKSGGDLGLIGRGAGFPE 233
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302
F N ++ + G + +K+ +A ++ + K +A
Sbjct: 234 VFDTCFSLPVNVISDVTPSPYGFHLFKVVEKKPAQRRTLEQARAEIAEKLGREKRAGAQA 293
Query: 303 EYVKKLRSNAIIH 315
EY++ LR A I
Sbjct: 294 EYLEALRKRAQID 306
>gi|254671556|emb|CBA09191.1| PPIC-type PPIASE domain protein [Neisseria meningitidis alpha153]
Length = 366
Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 77 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQL 136
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 137 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 194
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 195 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 247
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 248 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 304
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 305 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 364
>gi|121634150|ref|YP_974395.1| putative rotamase [Neisseria meningitidis FAM18]
gi|120865856|emb|CAM09589.1| putative rotamase [Neisseria meningitidis FAM18]
Length = 405
Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 116 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQL 175
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 176 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 233
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 234 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 286
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 287 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 343
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 344 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 403
>gi|309379764|emb|CBX21540.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 327
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 96/290 (33%), Gaps = 25/290 (8%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT +++ +A K +Q + EL + +L+ ++L Q +
Sbjct: 49 FSDGIAAVADNEVITRRRLAQAVADAKANLPKDVQIGDEELTGQVLMQLVNQSLIVQAGK 108
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ + LSAE + + + V +
Sbjct: 109 RRNIQASEAEIDAAAAQNPQLKHLSAEQ-----------RRELADSIIAEKVRQQAVMQN 157
Query: 152 FMLKYGNLEMEI-PANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ ++ I A KQ + R+Y + +L R +
Sbjct: 158 SRVSEAEVDRFIEQAQKQGITLPEGEPLRQYRAQHILIKADGENAAVGAESTIRK--IYD 215
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
+++ + G + + + F+ + + P TQ G
Sbjct: 216 QARNGTDFSGLARQYSQDAGAGNGGDLGWFSDGVMVAPFEAAVHALKPGQVSAPVRTQFG 275
Query: 267 VEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K E+ AE ++ L S A I
Sbjct: 276 WHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAEQATAELLRDLHSGAYID 325
>gi|298506467|gb|ADI85190.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter
sulfurreducens KN400]
Length = 351
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/293 (16%), Positives = 97/293 (33%), Gaps = 20/293 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVETLKKQEI 90
+ + +NG IT ++ + +L Q ++E+ AV +LI + L Q
Sbjct: 59 AAVVVKVNGVAITRAEVDRAKKVLMSQNRMTQPMTPDIAQKVEEAAVSQLIAKELLYQAG 118
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
K I V Q S E++ L + + + + + ++++
Sbjct: 119 RKQEIKDLDKQVQERVSQSKARFP-SQEEYLKTLKSMDMTEKDVETFAREDLVINNLIEK 177
Query: 151 DFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + K + + N K +L + N + K +A
Sbjct: 178 EVVAKTTVSDEDAKKFYNDNIDKFKRDETVKASHILIKVEPNASADDKKKAKEKAEAILK 237
Query: 209 RLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
+++ D ++ K S G + + + P F+ ++ TQ G
Sbjct: 238 QVKGGADFAEVAKKESGCPSAPQGGDLGFFGKGQMVPPFEKAAFAMKPGEVSDVVETQFG 297
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQ----NTPTKIEKHEAEYVKKLRSNAIIH 315
I + DKR E + K+++ EYV+ L+ A I
Sbjct: 298 YHIIKLTDKRP--AETVKFEETKDRIVQFLKQQKVQEGINEYVENLKKAAKIE 348
>gi|325121999|gb|ADY81522.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus
PHEA-2]
Length = 436
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 102/276 (36%), Gaps = 16/276 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQKI 68
K L +F + S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 4 KHLKQFFKATTLAALISSSMHSFAQPADEVVAIVDNSVILKSDLQQGMAEAAHELQAQKK 63
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 64 EVPPQQYLQFQVLDQLILREAQLEQVKKYGIKPDEKSLNEAVLKVAGQSGSKSLEAFQQK 123
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
LD + +A + + M + + ++ + +
Sbjct: 124 LDAMAPGTYESLRGRIAEDLAISRLRQQQVMSRIKISDQDVENFLKSPQGQAALGNQAHV 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ I + Q V K ++ S+L D N L+K ++ V + SD+
Sbjct: 184 IHMRISGDNAQEVQSVAKEVR----SKLAQSNDINALKKLSTANVKVEGADMGFRPLSDI 239
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ + Q TT+ + GV + + +++
Sbjct: 240 PTELAARITPLQDGQTTDLVSVRDGVHVLKLLERKQ 275
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V ++ R +L + K+I D RL+
Sbjct: 261 VRDGVHVLKLLERKQNEQKALVPQFQTRHILIQPSEVVTLENA---KQIIDNIYKRLKAG 317
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 318 QDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 377
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 378 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 423
>gi|150014979|ref|YP_001307233.1| peptidylprolyl isomerase [Clostridium beijerinckii NCIMB 8052]
gi|149901444|gb|ABR32277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
beijerinckii NCIMB 8052]
Length = 362
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/330 (13%), Positives = 101/330 (30%), Gaps = 31/330 (9%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K L F+ L + + ++ A+ + T+ E IT GD+ K +
Sbjct: 17 KTLKKLKKFVAALAMVTIAVSAMGCKMIEKTPEAIQKTVLATVGNEKITKGDLDKEMEKY 76
Query: 64 KLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
Q + +K + L+ + + Q+ + + + +N
Sbjct: 77 TAQLKQQYGDNYESNAQVKDQLQQAKKQELDSLVTQKVVLQKATELNLKPSDDDINKQVD 136
Query: 108 QHARNTGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
F S L++ G+ ++ K + I V+ D + + ++
Sbjct: 137 DQIAQIKSQYSEEGQFESVLEQNGLTEDQLKDVVKNNVIM-QAVQQDIVKDIEVTDDDVQ 195
Query: 165 ANKQKMKNITVRE---YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ K+ + +L + + + +++L D KL K
Sbjct: 196 TYYNENKDSKYTQGAGANASHILIAEKASDGSIDYDASLTKANDIKAKLDSGADFAKLAK 255
Query: 222 FASKIHDV--SIGKAQYLL--ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
S + G ++ + L +F + K + + P +Q G I +
Sbjct: 256 ENSTDSGTKDNGGSLGFVAYNSTQLVAEFMDGFKNLKEGEISAPVKSQFGYHIIKATGLK 315
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAE 303
D E S+ + + ++
Sbjct: 316 DSQVTPFEQVKDQIKSSLLQQKQQDALSSK 345
>gi|239502210|ref|ZP_04661520.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB900]
Length = 436
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 104/278 (37%), Gaps = 20/278 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQKI 68
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123
Query: 124 LDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
D I + + +A + + M + + ++ + +
Sbjct: 124 FDA--IAPGTYENLRSRIAEDLAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQA 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ I + Q V K ++ S+L D N L+K ++ V + S
Sbjct: 182 HVIHMRISGDNPQEVQNVAKEVR----SQLAQNNDLNALKKLSTATVKVEGADMGFRPLS 237
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
D+ + + Q TT+ + GV + + +++
Sbjct: 238 DIPAELAARITPLQDGQTTDLISVRDGVHVLKLLERKQ 275
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 261 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 317
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 318 EDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 377
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 378 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 423
>gi|299770418|ref|YP_003732444.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. DR1]
gi|298700506|gb|ADI91071.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. DR1]
Length = 436
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 16/276 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQKI 68
K L +F + S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 4 KHLKQFFKATTLAALISSSMHSFAQPADEVVAIVDNSVILKSDLQQGMAEAAHELQAQKK 63
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 64 EVPPQQYLQFQVLDQLILREAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 123
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
LD + +A + + M + + ++ + +
Sbjct: 124 LDAMAPGTYESLRGRIAEDLAISRLRQQQVMSRIKISDQDVENFLKSPQGQAALGNQAHV 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ I + Q V + ++ S+L D N L+K ++ V + SD+
Sbjct: 184 IHMRITGDNPQEVQSVAQEVR----SKLAQSNDINVLKKLSTANAKVDGADMGFRPLSDI 239
Query: 243 HPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + TT+ + GV + + +++
Sbjct: 240 PAELAARITPLQEGQTTDLISVRDGVHVLKLIERKQ 275
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + + K+I D RL+
Sbjct: 261 VRDGVHVLKLIERKQNEQKALVPQYQTRHILIQPSEVVSLDNA---KQIIDNIYKRLKAG 317
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 318 DDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 377
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +KR+ E + L + T+I+ +++++R+NA +
Sbjct: 378 QVTEKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 423
>gi|313675959|ref|YP_004053955.1| ppic-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa
DSM 4126]
gi|312942657|gb|ADR21847.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa
DSM 4126]
Length = 449
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 87/272 (31%), Gaps = 18/272 (6%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIA 76
+ +F + + + +I ++ +I + D++ + L + + + E
Sbjct: 13 TSLAFLFAPIWVEAQSEVKTVDKIIAKVDNYIILESDLALAYKDRLSRGGQQSAEGRCEV 72
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS---SFLDKQGIGDNH 133
++ LIV L + E +T + V+ + + + G +
Sbjct: 73 LESLIVNKLMLAKAEIDSVTVLESQVDAQLEN---RMKMMVQQIGSEEKIEEYYGKSLDE 129
Query: 134 FKQYLA----IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
FK + Q I ++ + ++ + ++ Y + + I
Sbjct: 130 FKVEIRDDVKEQMIIGEMQRT-ITQDLEVTPKQVQNFFDNIPKDSLPFYSTQVQVGQIVK 188
Query: 190 NKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQ 245
++ + R R+ ++ + + S+ S G Y L P+
Sbjct: 189 KPTMSREAKENIKARLNGLRERILEGENFEDIARLYSQEPGAKQSGGNIGYFERGQLAPE 248
Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ L+ + P T G I + D+R
Sbjct: 249 YEATALRLKPGEISKPVETDFGFHIIELLDRR 280
>gi|325205366|gb|ADZ00819.1| surA/PPIASE domain protein [Neisseria meningitidis M04-240196]
Length = 387
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 98 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 157
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 158 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 215
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 216 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 268
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 269 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 325
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 326 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 385
>gi|325203397|gb|ADY98850.1| PPIC-type PPIASE domain protein [Neisseria meningitidis M01-240355]
Length = 366
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 77 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 136
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 137 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 194
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 195 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 247
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 248 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 304
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 305 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 364
>gi|325199485|gb|ADY94940.1| PPIC-type PPIASE domain protein [Neisseria meningitidis H44/76]
Length = 360
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 71 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 130
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 131 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 188
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 189 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 241
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 242 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 298
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 299 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 358
>gi|325197566|gb|ADY93022.1| PPIC-type PPIASE domain protein [Neisseria meningitidis G2136]
Length = 360
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 71 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 130
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 131 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 188
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 189 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 241
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 242 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 298
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 299 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 358
>gi|325145275|gb|EGC67554.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis
M01-240013]
Length = 369
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 80 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 139
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 140 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 197
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 198 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 250
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 251 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 307
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 308 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 367
>gi|325143121|gb|EGC65468.1| PPIC-type PPIASE domain protein [Neisseria meningitidis 961-5945]
Length = 363
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 74 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 133
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 134 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 191
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 192 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 244
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 245 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 301
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 302 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 361
>gi|325141118|gb|EGC63621.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis CU385]
Length = 357
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 68 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 127
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 128 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 185
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 186 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 238
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 239 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 295
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 296 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 355
>gi|325135085|gb|EGC57713.1| PPIC-type PPIASE domain protein [Neisseria meningitidis M13399]
Length = 363
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 74 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 133
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 134 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 191
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 192 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 244
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 245 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 301
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 302 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 361
>gi|325128991|gb|EGC51842.1| surA/PPIASE domain protein [Neisseria meningitidis N1568]
Length = 390
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 101 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 160
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 161 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 218
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 219 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 271
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 272 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 328
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 329 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 388
>gi|261391812|emb|CAX49267.1| putative peptidylprolyl isomerase (peptidyl-prolyl cis-trans
isomerase; PPIase; rotamase; cyclophilin; FKBP65)
[Neisseria meningitidis 8013]
Length = 354
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 65 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 124
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 125 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 182
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 183 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 235
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 236 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 292
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 293 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 352
>gi|254674145|emb|CBA09929.1| PPIC-type PPIASE domain protein [Neisseria meningitidis alpha275]
Length = 378
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 89 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 148
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 149 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 206
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 207 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 259
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 260 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 316
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 317 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 376
>gi|241668931|ref|ZP_04756509.1| peptidyl-prolyl cis-trans isomerase (PPIase) [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254877463|ref|ZP_05250173.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254843484|gb|EET21898.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 470
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 98/246 (39%), Gaps = 17/246 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGI 95
+N + IT ++ + +A + N + + A+Q+LI +++ Q E++ I
Sbjct: 56 VAIVNSKPITSFELDQEVAKFEAMNPNSSFHSDSLQIRREALQDLIAQSVLLQLAERNNI 115
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ ++ A G+S E ++ G+ +K+ + Q + + + +
Sbjct: 116 IISNQQLDAAIKDIAAKNGVSVESLKLNVEASGMSFESYKKRIREQLMVSQLQQQAISQQ 175
Query: 156 YGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
EI +K + RE Y ++ ++ ++PD+K Q + K A
Sbjct: 176 VYVSPEEIQKYIKKHQEQFDREMAPIKLYTLKNLIVALPDSKKARQKKIDLFKKLAIAV- 234
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
+ D +++ K S+ + + G + + +++ + ++ + P++
Sbjct: 235 NKGYIDFSEVVKQFSQAPNATYGGIVSQQVKFDSIPSMYRDYVKDLKEHQVSEPFIVNHT 294
Query: 267 VEYIAI 272
++ I I
Sbjct: 295 LQMIYI 300
>gi|15676205|ref|NP_273337.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis MC58]
gi|7225507|gb|AAF40735.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis MC58]
Length = 348
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 59 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 118
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 119 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 176
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 177 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 229
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 230 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 286
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 287 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 346
>gi|293608269|ref|ZP_06690572.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828842|gb|EFF87204.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 441
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 102/276 (36%), Gaps = 16/276 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQKI 68
K L +F + S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 9 KHLKQFFKATTLAALISSSMHSFAQPADEVVAIVDNSVILKSDLQQGMAEAAHELQAQKK 68
Query: 69 NGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
++ + +LI+ + ++++K GI D ++N ++ A +G S E F
Sbjct: 69 EVPPQQYLQFQVLDQLILREAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQK 128
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
LD + +A + + M + + ++ + +
Sbjct: 129 LDAMAPGTYESLRNRIAEDLAISRLRQQQVMSRIKISDQDVENFLKSPQGQAALGNQAHV 188
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+ I + Q V + ++ S+L D N L+K ++ V + SD+
Sbjct: 189 IHMRISGDNAQEVQSVAQEVR----SKLAQSNDINALKKLSTANVKVEGADMGFRPLSDI 244
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+ + Q TT+ + GV + + +++
Sbjct: 245 PAELAARITPLQDGQTTDLVSVRDGVHVLKLLERKQ 280
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V ++ R +L + K+I D RL+
Sbjct: 266 VRDGVHVLKLLERKQNEQKALVPQFQTRHILIQPSEVVTLENA---KQIIDNIYKRLKAG 322
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 323 QDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKQMQEIPVGEISEPFQTQFGWHIL 382
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 383 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 428
>gi|94310806|ref|YP_584016.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus
metallidurans CH34]
gi|93354658|gb|ABF08747.1| Peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans
CH34]
Length = 264
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 95/299 (31%), Gaps = 46/299 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ F + +++ S ++ +NG+ I+ + K IA Q EL A LI
Sbjct: 6 LSFSLAAVLAAGSLPAFAQNAAVVNGKPISSAKVDKLIASTG-QPETPELRDRARNMLID 64
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L QE K GIT V Q AR L+ F ++ G D ++
Sbjct: 65 RELLLQEANKRGITQRD-DVQEQLEQ-ARLNVLAGAVFEDYVRTHGASDEELRKQY---- 118
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
K K + +EY +R +L + + + + K
Sbjct: 119 -----------------------EKIKAQFGNGKEYHVRHILV---EKEADAKALIAKIK 152
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NP 260
A+ + + + + G + S P+F + + T P
Sbjct: 153 AGAKFEDVAKAQSKDTG-------SAANGGDLDWANSSSYVPEFSAAMTNLKKGQMTDTP 205
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIH 315
TQ G I + D RD + Q + + E +K L+ A I
Sbjct: 206 VKTQFGWHIIELVDTRDAKIPSFEEVKPQLQQMMMGDQGWQREQFQAMMKSLKDKAKIQ 264
>gi|316985214|gb|EFV64166.1| PPIC-type PPIASE domain protein [Neisseria meningitidis H44/76]
Length = 359
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 70 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 129
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 130 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 187
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 188 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 240
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 241 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 297
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 298 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 357
>gi|182420516|ref|ZP_02643225.2| foldase protein PrsA [Clostridium perfringens NCTC 8239]
gi|182624265|ref|ZP_02952050.1| foldase protein PrsA [Clostridium perfringens D str. JGS1721]
gi|177910483|gb|EDT72856.1| foldase protein PrsA [Clostridium perfringens D str. JGS1721]
gi|182380295|gb|EDT77774.1| foldase protein PrsA [Clostridium perfringens NCTC 8239]
Length = 325
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 108/305 (35%), Gaps = 34/305 (11%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE-------------- 71
+V A+ T+NGE IT G++ + +++ G+
Sbjct: 7 CNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQILQ 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ VQ L+ + + E +K GI V+ F + G ++F L+ +
Sbjct: 67 QRQSVVQSLVTDKVLVAEADKLGIKPSEEDIKKKVDEQFENIKKGMG---DNFDKALEAE 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G ++ FK++L Q I V+ +K + +++ ++ K + + ++ +LF
Sbjct: 124 GYTEDTFKEFLKNQVIAEATVEYATKDVKVSDEDIKKYYDENKQQFVVKAGADVKHLLFP 183
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---SKIHDVSIGKAQYLLESDLH 243
+ QK + + + NK EK + ++G+ Y +
Sbjct: 184 T-------EEEAQKAYDEIQSGKTTFDDLFNKYEKNKDPKKEPIAENLGRVDYNNSNFDK 236
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ L + P + G I + D ++ + + + +K +
Sbjct: 237 DFMEGLKGLKDGEISKPVKSSFGYHIIKATNITDKETQLTEEQAKEQIISILENQKKKEA 296
Query: 304 YVKKL 308
Y K L
Sbjct: 297 YQKDL 301
>gi|161870782|ref|YP_001599955.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis 053442]
gi|161596335|gb|ABX73995.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis 053442]
Length = 353
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 64 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQL 123
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 124 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 181
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 182 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 234
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 235 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 291
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 292 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 351
>gi|51473852|ref|YP_067609.1| hypothetical protein RT0667 [Rickettsia typhi str. Wilmington]
gi|81389996|sp|Q68W65|Y667_RICTY RecName: Full=Uncharacterized protein RT0667; Flags: Precursor
gi|51460164|gb|AAU04127.1| rickettsial conserved hypothetical protein [Rickettsia typhi str.
Wilmington]
Length = 295
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 108/303 (35%), Gaps = 29/303 (9%)
Query: 24 IFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
+ I+ + S + A +S I ++N + IT + R ++ + + +L
Sbjct: 4 LLLIITVFSTFNVAQASLTSIVASVNDKPITFNEFHARKKMIMVLNNVENLTSDQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A+ LI E+L Q I + ++ + +L + +
Sbjct: 64 DLAINSLIDESLLFQYAGDREIQ--QDEIDNAIKSIEDRNKMPHGSLLQYLKNKSVNPES 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ E L++ NK
Sbjct: 122 FIFQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV---EILMQVFRSKDGSNKA 178
Query: 193 QNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ +++ R+K + + L ++ SK+ +G + + DL P
Sbjct: 179 FTKMNYLKNRLKKCSDVKKTLYDKFATMQLITSKLS--KLGGVKQTIVKDLIPD------ 230
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+N + E I +C K+ L + Y+ T KI + + K +R
Sbjct: 231 ----KASNVFEVNNKFEIILVCSKKILNVTVDENNYVVNFLTNKKISQKAQKIFKNMRKK 286
Query: 312 AII 314
A I
Sbjct: 287 AAI 289
>gi|86160749|ref|YP_467534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777260|gb|ABC84097.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 317
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 97/313 (30%), Gaps = 21/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
+ + L C + + +NGE I +++ + +
Sbjct: 5 LAPILIATALAAGCGRCGGARSGERPAPGAVAVVNGEPIPPDALARELRDAQAGAEGQAP 64
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + + +L+ L Q+ I + V F++ + F L +
Sbjct: 65 AAGDVLRRRVLDDLVDRALLLQQARARSIVVGQDQVERAFLRLRAEYPGT--HFDDLLAQ 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + K L Q V+ F + + A ++ E+ +
Sbjct: 123 ERLSQAELKARLKDQLT----VERLFEQEVFPQVQVVDAEVERYYAEHGAEFQEPERVHV 178
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYL-LESDLHP 244
+ + Q R E+ R R P+ ++ + +S + G ++ S
Sbjct: 179 LQIVVASREEAAQVR----EKLR-RNPQTFAEVARRSSIAPEGKGGGDLGFIGRGSGFPE 233
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEA 302
F N ++ + G + +K+ +A ++ + K +A
Sbjct: 234 VFDTCFALPVNVISDVTPSPYGFHLFKVVEKKPAQRRTLEQARAEIAEKLGREKRAGAQA 293
Query: 303 EYVKKLRSNAIIH 315
EY++ LR A I
Sbjct: 294 EYLEALRKRAQIE 306
>gi|78222152|ref|YP_383899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
gi|78193407|gb|ABB31174.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
Length = 330
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/322 (15%), Positives = 107/322 (33%), Gaps = 21/322 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDIS-KRIALLKLQKI 68
L F+L + + ++ A ++ +NG I + + AL +
Sbjct: 6 SLTFGLFLLGVMFTLHLLQTPVSADEVNKTGKVVARVNGVPIYENALQSHLAALANKGRA 65
Query: 69 NGELE----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+G K A+ LI L +Q + +T V+ + E
Sbjct: 66 SGFARDPAKMNDYQKKKALYSLIDAELLRQASNQQQVTDLDAKVSKRLQEVKGKFP-DEE 124
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVRE 177
F L +G + F L + + + + ++ + EI + + +V E
Sbjct: 125 AFLKNLQARGKTLDIFVAELRDGIRYDEYLTSKKVIGVPVPDEEIQKFYRDNPTSFSVPE 184
Query: 178 -YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+R +L + + +K+ + +R ++ ++ S G Y
Sbjct: 185 QIKVRHILIEPDGSTAEAVAKAEKKAGEIRNRVVRDKDFAAVAKEVSACSTASSGGDLGY 244
Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNT 293
+ + +F + N + P T+ G + + DK+ + ++ ++S
Sbjct: 245 VSRGTMPAEFDKVAFSLKLNEVSEPVRTKFGFHIMEVLDKKPVTVRPYSEVREFISRYLQ 304
Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315
EK + +LR A I
Sbjct: 305 RFDDEKRLNAHTLELRKKATIE 326
>gi|325202891|gb|ADY98345.1| PPIC-type PPIASE domain protein [Neisseria meningitidis M01-240149]
gi|325207310|gb|ADZ02762.1| surA/PPIASE domain protein [Neisseria meningitidis NZ-05/33]
Length = 348
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 59 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQL 118
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 119 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 176
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 177 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 229
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 230 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 286
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 287 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 346
>gi|325137107|gb|EGC59703.1| rotamase [Neisseria meningitidis M0579]
Length = 360
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 71 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQL 130
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 131 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 188
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 189 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 241
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 242 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 298
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 299 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 358
>gi|325131008|gb|EGC53735.1| PPIC-type PPIASE domain protein [Neisseria meningitidis OX99.30304]
Length = 339
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 50 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQL 109
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 110 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 167
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 168 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 220
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 221 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 277
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 278 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 337
>gi|254805678|ref|YP_003083899.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis alpha14]
gi|254669220|emb|CBA08040.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis alpha14]
Length = 351
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ +A K Q EL + + +L
Sbjct: 62 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKANLPKEAQISESELSRQVLMQL 121
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ +++ LS F I +Q +
Sbjct: 122 VNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSPAQRRDF--ADNIIAEKVRQQAVM 179
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 180 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 232
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 233 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 289
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 290 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 349
>gi|291278663|ref|YP_003495498.1| peptidyl-prolyl cis-trans isomerase SurA [Deferribacter
desulfuricans SSM1]
gi|290753365|dbj|BAI79742.1| peptidyl-prolyl cis-trans isomerase SurA [Deferribacter
desulfuricans SSM1]
Length = 304
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 95/298 (31%), Gaps = 21/298 (7%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDIS----KRIALLKLQKINGELEK-------IAVQE 79
V+ + ++ + ++IT D+ K++ + K EK +
Sbjct: 15 VTIAQSKIIDKVVAIVGDKIITQYDVESFNPKQVKKIYSIKDEATREKLLKKYYKEVLDF 74
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
L+ + + + E+ GI + V + ++ E L++ + +K L
Sbjct: 75 LVNQYVLEIAAEREGIKVSESEVENALNEVLTKNNITIEQLEKVLEENNLTLAKYKYQLK 134
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + + + K E +I + + + I D +
Sbjct: 135 NEILNARIRNALILPKLVVTEEDIKHYIDEHNKELKLDDQFELRIIKIKD---------K 185
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259
R+ + E+ + + K++ S G ++ + L + + +K +
Sbjct: 186 NRLDEIEKFLKKGGSFADAAIKYSVDKTAKSGGYIGWIKLNHLPEKIREKVKGYKEGDIV 245
Query: 260 PYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + I + + + +K + + +++K ++ I Y
Sbjct: 246 KIEDNGEITLLFIENFKSKYDIDDKMKDEIVKKIKEKMYPDVVKNWLEKHKATIFIKY 303
>gi|148269160|ref|YP_001243620.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga
petrophila RKU-1]
gi|170287822|ref|YP_001738060.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga sp. RQ2]
gi|281411458|ref|YP_003345537.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga
naphthophila RKU-10]
gi|147734704|gb|ABQ46044.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga
petrophila RKU-1]
gi|170175325|gb|ACB08377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga sp. RQ2]
gi|281372561|gb|ADA66123.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga
naphthophila RKU-10]
Length = 329
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/334 (13%), Positives = 107/334 (32%), Gaps = 47/334 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--- 72
+ +I+ + + ++ SS + +NG IT + + + + ++
Sbjct: 1 MRKLIFVILVVLGISLFGQATTTSSTVVAIVNGNPITSDLLELEADIDGILRSIAQIDLR 60
Query: 73 ------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QHA 110
++ + LI + L +Q EK G+ V +
Sbjct: 61 FFNVLTGTEEGLKLLLKYKQEVLNSLIDDLLVQQLAEKEGVGVSDEEVKKEVEARLKETV 120
Query: 111 RNTGLSAEDFSSFLDKQGIG-DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
G++ ED FL + G G FK+ L L L+ +I N
Sbjct: 121 ETMGITLEDLDKFLQRAGYGDLESFKKRLHWHM--------KTQLSLQRLQEKITQNATV 172
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-RLRLPKDCNKLEKFASKIHD 228
Y + IP + + + K E ++R +D ++
Sbjct: 173 TLEEAQNYYNQNKETYRIPAAVHLYRITTEDKSKMDEALSKIRKGEDFLEVATQV----- 227
Query: 229 VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALK 285
+ G ++ E L ++++ + P+ ++ + +KR + +K
Sbjct: 228 ATGGDLGWIEEGKLEKDIESVIFDAPEGAILGPFESEGKFVLYKVVEKRSSSYKKFEEVK 287
Query: 286 AYLSAQNTPTKIEKHEAEY----VKKLRSNAIIH 315
+ + K + ++ ++ + N+ I
Sbjct: 288 QEIMDKLLADKKNQLWNDWFNKVFEEFKKNSQIE 321
>gi|39997524|ref|NP_953475.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Geobacter sulfurreducens PCA]
gi|39984415|gb|AAR35802.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA]
Length = 351
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 20/293 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---------NGELEKIAVQELIVETLKKQEI 90
+ + +NG IT ++ + +L Q ++E+ AV +LI + L Q
Sbjct: 59 AAVVVKVNGVAITRAEVDRAKKVLMSQNRMTQPVTPDIAQKVEEAAVSQLIAKELLYQAG 118
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
K I + Q S E++ L + + + + + ++++
Sbjct: 119 RKQEIKDLDKQIQERVSQSKARFP-SQEEYLKTLKSMDMTEKDVETFAREDLVINNLIEK 177
Query: 151 DFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
D + K + E N K +L + N + K +A
Sbjct: 178 DVVAKTTVSDEEAKKFYNDNIDKFKRDETVKASHILIKVEPNASADDKKKAKEKAEAILK 237
Query: 209 RLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
+++ D ++ K S G + + + P F+ ++ TQ G
Sbjct: 238 QVKGGADFAEVAKKESGCPSAPQGGDLGFFGKGQMVPPFEKAAFAMKPGEVSDVVETQFG 297
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQ----NTPTKIEKHEAEYVKKLRSNAIIH 315
I + DKR E + K+++ EYV+ L+ A I
Sbjct: 298 YHIIKLTDKRP--AETVKFEETKDRIVQFLKQQKVQEGINEYVENLKKAAKIE 348
>gi|50085462|ref|YP_046972.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ADP1]
gi|49531438|emb|CAG69150.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ADP1]
Length = 451
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 113/310 (36%), Gaps = 17/310 (5%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL----LKL 65
+ ++K L + + S+ A + + ++ VI D+ + +A L+
Sbjct: 8 TKYLKQFFKTTALALVVSSSMQSFA--APTDEVVAIVDNSVILKSDLEQGVAEAQHQLEA 65
Query: 66 QKINGE----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
QK L+ + +LI+ + +++++ GI D NT+N ++ A +G+ S F
Sbjct: 66 QKKTVPPLNYLQLQVLDQLILRQAQLEQVKRYGIKPDENTLNDAVLKVASQSGIKSLSAF 125
Query: 121 SSFLDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
LD I + + + + + M + + ++ + + +
Sbjct: 126 QQKLDA--IAPGTYASLRNRIGEDLAINRLRQQQVMSRIKISDQDVANFLKSPQGQAMLG 183
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
+ + I + +Q + +++ +KF++K V Y
Sbjct: 184 SQVHVIHARISAQSDVDPQQLQSVAQQVKQALNESNDITAISKKFSTKDIKVEGADMGYR 243
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
++L + + Q TT+ + G+ + + ++++ + + Y +
Sbjct: 244 DLAELPSELAARVSPLQAGQTTDLINVRDGIHVLKLIERKNSEQKAIVTQYQTRHILIQP 303
Query: 297 IEKHEAEYVK 306
E AE K
Sbjct: 304 SEVMSAEMAK 313
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ G +++ K + V +Y R +L + + K+ D+ +RL+
Sbjct: 269 NVRDGIHVLKLIERKNSEQKAIVTQYQTRHILIQPSEVM---SAEMAKQTIDSIYNRLKA 325
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
+D L S + G ++ + P+F++ +K + + P+ TQ G
Sbjct: 326 GEDFTTLAATYSADTGSARDGGSLGWVTPGSMVPEFESKMKNTPVGQISEPFQTQFGWHI 385
Query: 270 IAICDKRDLGGEIA---LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + R+ ++ + + + +++++R++A +
Sbjct: 386 LQVTATREK--DMTHEYQERMARQVLGERQFDSELDSWLREVRAHAFVQ 432
>gi|322437244|ref|YP_004219456.1| SurA domain protein [Acidobacterium sp. MP5ACTX9]
gi|321164971|gb|ADW70676.1| SurA domain protein [Acidobacterium sp. MP5ACTX9]
Length = 377
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/318 (15%), Positives = 99/318 (31%), Gaps = 38/318 (11%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIA-------VQELIVETLKK 87
S+ + T+NG I D+ K L L + + + A +++LI E + +
Sbjct: 51 PQHSADVMATVNGHAIMRADLDKVYNLQLGEAQQSQPSAEQADSQRLGLLKQLIDEEIVQ 110
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
Q K +T + V+ + + E F L ++ + K+ L +
Sbjct: 111 QRATKMNLTATNEEVDAKLAEM--KAPYTEEQFDGLLRERHTSVDDIKRDLRRSLTMNKL 168
Query: 148 VKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + K + +I + N +Y I +L + K D
Sbjct: 169 LNKEINSKVTVSDADITSYFNQHKSEFNNIETQYHIARILVTSSPAPQAGNLQGSKAQTD 228
Query: 205 AEE--------SRLRLPKDCNKLEKFASKIH--DVSIGKAQYLLESDL---HPQFQNLLK 251
A+ +R+ +D L S+ S G + E+ + F +L
Sbjct: 229 ADAKKKILALKNRVDSGEDFGSLAMNFSEDPQTSASGGDMGSVAETQMKSNPIIFNSLAN 288
Query: 252 KSQNNTTN----PYVTQ----KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA- 302
T+ P + G + + G + + + +
Sbjct: 289 LKPGQVTDIMPFPDPSDPKKVGGYAIFQLLSRDPAGQHDVSEPQVQQRIRQGLHDARSQL 348
Query: 303 ---EYVKKLRSNAIIHYY 317
Y + LR +A + +
Sbjct: 349 LKGAYYEMLRDHAKVENF 366
>gi|325139171|gb|EGC61717.1| PPIC-type PPIASE domain protein [Neisseria meningitidis ES14902]
Length = 408
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ ++ K Q EL + + +L
Sbjct: 119 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVSEAKANLPKDAQISESELSRQVLMQL 178
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 179 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 236
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 237 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 289
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 290 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 346
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 347 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 406
>gi|325131574|gb|EGC54281.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis M6190]
Length = 405
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 23/300 (7%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQEL 80
P S I + EVIT +++ ++ K Q EL + + +L
Sbjct: 116 AAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVSEAKANLPKDAQISESELSRQVLMQL 175
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ ++L Q ++ I ++ ++ LS F I +Q +
Sbjct: 176 VNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQAVM 233
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFV 198
Q + + +E + +Y + +L
Sbjct: 234 Q-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAES 286
Query: 199 QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
R E R D + +++ + G + + + P F+ +
Sbjct: 287 TIRKIYGEA---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQ 343
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + RD G + + K E+ ++ L S A +
Sbjct: 344 VGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVD 403
>gi|58617519|ref|YP_196718.1| hypothetical protein ERGA_CDS_07920 [Ehrlichia ruminantium str.
Gardel]
gi|58417131|emb|CAI28244.1| Hypothetical protein ERGA_CDS_07920 [Ehrlichia ruminantium str.
Gardel]
Length = 425
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/309 (18%), Positives = 116/309 (37%), Gaps = 30/309 (9%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEK-IAVQEL 80
+F ++ + + ++ +NGE+I+ D+ + IA+ K ++ ++ K IA+ L
Sbjct: 32 GLFLLIFAFYCSNAFANVKMVAMVNGELISSLDLERYIAISKFFYHVDSDVAKDIALDSL 91
Query: 81 IVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSA-EDFSSFLDKQGIGDNHFK 135
I E + KQE EK + VN FV N + DF S+ ++QG+ +
Sbjct: 92 IDEYIWKQEAEKLKVVVSEQEILDAVNQLFVMKGSNHKENHNNDFKSYTEQQGLDYDMLI 151
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
Q++ + +W ++ + EI ++ M + + +P N
Sbjct: 152 QHVKSKLLWNKILMLKVVPYISVSTKEILDSQDTMLSPNGLNIFVHIQEIVLPVGLSDNN 211
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI----HDVSIGKAQYLLESDLHPQFQNLLK 251
R L + ++K + +++ +L + L L
Sbjct: 212 VTDVIRS-------LHDGISIDNIKKRVEGLLFEETSINLKDIDIVLANQL-------LN 257
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK---L 308
N+ P T+ G I + ++ ++ E A + Q E +YV + L
Sbjct: 258 AKVNDVIGPIKTEYGNLIIKLLNRFEINREFANSSVNLQQMYLDVQE--SKKYVDQISLL 315
Query: 309 RSNAIIHYY 317
++ A +
Sbjct: 316 KTKAKCENF 324
>gi|167629347|ref|YP_001679846.1| ppic-type ppiase domain protein, putative [Heliobacterium
modesticaldum Ice1]
gi|167592087|gb|ABZ83835.1| ppic-type ppiase domain protein, putative [Heliobacterium
modesticaldum Ice1]
Length = 338
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 101/289 (34%), Gaps = 26/289 (8%)
Query: 42 IRTTINGEVITDGDISKRIALLK--LQKING--------ELEKIAVQELIVETLKKQEIE 91
+ ++NGE I+ D+ KRI K L + G LE+ ++ +I E L QE +
Sbjct: 29 VVASVNGETISRSDLDKRINRYKEELSRSGGADSKELMANLERQELEHMIDEMLFTQEAK 88
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN- 150
K I V + + S +F L + + ++ + + I+ +
Sbjct: 89 KRNIEVSDGQVAAELAKEKQQFP-SDAEFQEALKRYRLTEDELSGIIRTRLIFNGLYDAV 147
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
++ + ++E K R+ +L + ++ + A+ ++L
Sbjct: 148 TSDIQISDADVEKYYRDNPDKFKQNRQVKASHILLKTEEEAKAIIAELE---RGADFAQL 204
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVE 268
+ K + G Y D+ +F + + T+ P + G
Sbjct: 205 AVQKSTDSTAAQNK-------GDLGYFQAEDMVKEFSDAAFSMKKGETSRTPVKSNFGYH 257
Query: 269 YIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D ++ + +K + + ++ + +++ A I
Sbjct: 258 VIRVEDIKEARQQRFDEVKDQIRVDLGADRKQERFESWFADVKAQAKIE 306
>gi|299136355|ref|ZP_07029539.1| SurA domain protein [Acidobacterium sp. MP5ACTX8]
gi|298602479|gb|EFI58633.1| SurA domain protein [Acidobacterium sp. MP5ACTX8]
Length = 350
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/340 (15%), Positives = 108/340 (31%), Gaps = 39/340 (11%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE 71
K+ + VL +V ++S + T+NG I ++ K L +
Sbjct: 3 KIFRSSAVLFASTLV-LLSGCHKGPQDGVVGTVNGHPILRTEVDKAYNAQLASNPQQTAP 61
Query: 72 LEKIA-------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
A + ELIVE + +Q K + + V+ + + E F + L
Sbjct: 62 SADQADSLRLNILHELIVEEIVEQRAAKQNLIATDSEVDAKLAEM--KAPYTEEQFQARL 119
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK---NITVREYLIR 181
+ + ++ + + + K + ++ K N+ Y +
Sbjct: 120 KTANLTLDELRRDIRRNLTQTKLFNKEIDSKITVTDGDVNNYFNAHKDSFNLIENRYHLA 179
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEES--------RLRLPKDCNKLEKFASKIHDVS--I 231
+L + + + K D E RL D + S+ D +
Sbjct: 180 QILVTNQPAQQSSNLQNSKATTDDEARKKIQALKNRLDTGDDFGTIASNFSENQDTAPNG 239
Query: 232 GKAQYLLESDL---HPQFQNLLKKSQNNTTNPYVT-------QKGVEYIAICDKRDLG-- 279
G ++ ES + + ++K T+ G + K G
Sbjct: 240 GDVGFVPESQMKADPTAYAAIMKLKAGQITDILPVLDGTTHKVAGYSIYKLISKEPAGQR 299
Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ ++ + Q ++ + +A Y++ LR A + Y
Sbjct: 300 DLNDPRVQQNIRQQLHESRSQLLKASYLEMLRDQAKVENY 339
>gi|302389639|ref|YP_003825460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermosediminibacter
oceani DSM 16646]
gi|302200267|gb|ADL07837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermosediminibacter
oceani DSM 16646]
Length = 297
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 112/301 (37%), Gaps = 28/301 (9%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I+ T +++I I+ +++ S S + +NGE I+ ++ + L +
Sbjct: 7 IRRKTVTYLIIATAILALIAGCSPGSSKEVVARVNGEEISKDELYDVMVKL--------V 58
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K A+ L+ + + E +K I + + G E F+ L G
Sbjct: 59 GKEALDYLVSQKIIDLEAKKQNINVSEEDIQRELEKVYEYYG-GEEAFTQNLQMSGYSLE 117
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ LA+ +++ K E EI + ++ K+ RE +R + + +
Sbjct: 118 EYKKDLAMDIKIKKLLE----PKISITEEEIKSYFEENKDNFAREKQVRARHILVENEEK 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-L 249
N+ + + + D +L K S G + D+ +F+
Sbjct: 174 ANEVIAKLKSGE----------DFAELAKQYSTDTATKEKGGDLGFFGRGDMVKEFEEAA 223
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT--PTKIEKHEAEYVKK 307
++P TQ G I + + ++ ++ ++ K+++ + ++++
Sbjct: 224 FSLKVGEISSPVKTQYGYHIIKVEEIKEAQEANYEESKDKIKDILLNQKVQQEYSTWMQE 283
Query: 308 L 308
L
Sbjct: 284 L 284
>gi|15604516|ref|NP_221034.1| hypothetical protein RP673 [Rickettsia prowazekii str. Madrid E]
gi|6226388|sp|O05951|Y673_RICPR RecName: Full=Uncharacterized protein RP673; Flags: Precursor
gi|2073481|emb|CAA72481.1| hypothetical protein [Rickettsia prowazekii]
gi|3861210|emb|CAA15110.1| unknown [Rickettsia prowazekii]
gi|292572304|gb|ADE30219.1| hypothetical protein rpr22_CDS651 [Rickettsia prowazekii Rp22]
Length = 295
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 104/304 (34%), Gaps = 29/304 (9%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A + I ++N + IT + R ++ + +L
Sbjct: 4 LLLIITVFFTFNVAQASLTSIVASVNDKPITLNEFHARKKMIMALNNIENLTADQDKQLN 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A+ LI E+L Q + ++ ++ +L + +
Sbjct: 64 DLAINSLIDESLLFQYAGDR--EIPQDEIDNAIKSIEDRNKMAHGSLLQYLKNKSVNPES 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ E L++ NK
Sbjct: 122 FILQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV---EILMQVFRSKDGSNKA 178
Query: 193 QNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ ++ R+K + + L ++ SK+ ++ K Q ++K
Sbjct: 179 FTKMNHLKNRLKKCSDVKRTLYDKFATMQIITSKLSNIEGVK-------------QTIVK 225
Query: 252 KS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ +N + E I +C K+ L Y+ T KI + + K +R
Sbjct: 226 DLIPDKASNVFEVNNKFEIILVCSKKILNVNADENNYVVNFLTNKKISQKAQKIFKNMRK 285
Query: 311 NAII 314
A I
Sbjct: 286 KAAI 289
>gi|224438394|ref|ZP_03659321.1| hypothetical protein HcinC1_10416 [Helicobacter cinaedi CCUG 18818]
gi|313144836|ref|ZP_07807029.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129867|gb|EFR47484.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 276
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/295 (19%), Positives = 108/295 (36%), Gaps = 33/295 (11%)
Query: 25 FCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
C + + S A + + + +NG IT +IS KLQ +K A+ LI E
Sbjct: 5 ICFLCLCVLVSQAEIIAGVAIRVNGHAITLSEIS------KLQTQMKISKKAAIDMLINE 58
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
LK EIE+ I+ D ++ Q A N LS + + + + G ++ + Q
Sbjct: 59 RLKDDEIERFKISIDEFKIDEEISQIAANANLSKDALLAKVTRDGTTLQEYRNKIKKQLQ 118
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++++ + + +E+L+ + + + QN+G +Q
Sbjct: 119 TKELMQRILASNISISSEDELLSYYTKHK---KEFLLPSSVRVV-RYTAQNEGNLQ---- 170
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
+ + + S L PQ + + NN P +T
Sbjct: 171 --------------NAIQSPKTTIQGVQKINETISLSSLSPQIAQVFLNTPNNEFTPVLT 216
Query: 264 QKGVEYIAICDKRDLGGEIA----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G +++ K LG + K ++ + K + E+ K+RS+A I
Sbjct: 217 TGGNSFVSFLVKERLGEKAISFDEAKPLINQKIMAQKEQSIITEHFNKIRSSANI 271
>gi|188996490|ref|YP_001930741.1| SurA domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931557|gb|ACD66187.1| SurA domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 290
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/315 (18%), Positives = 116/315 (36%), Gaps = 45/315 (14%)
Query: 14 KLLTTYFVLIIFCIVPI----VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+L + +L++ + + + ++ +NGE + D+ ++
Sbjct: 5 SILNAFLILLVVLSSTFNNKAKAEDGYQLFDKVVLVVNGEPVLKSDLEFAKNWYNIKD-- 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQG 128
+K +++I L Q+ K GI+ V+ + A+ G+ E F L+ G
Sbjct: 63 ---DKEVEEKIINSFLLAQQARKMGISVSPQEVDNAVLNIAKANGINDLETFKKKLEDSG 119
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
I + K++LA + ++ L M A+K ++ +R L I
Sbjct: 120 ISYSKLKEFLARDMLANRLLH---------LYMREKASKGIIEGTKEDVKTVR--LIFIS 168
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLH 243
N+ Q + K K+ + N +FASK D + G + + DL
Sbjct: 169 KNRPDYQEVLSKLDKELNK---------NNFSEFASKYSDDKFTAENKGLVGEIKKGDLV 219
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + + T +G +I I + + K + + ++EK +
Sbjct: 220 KELDEAIFSHKAGDIFKVETNEGTYFIYIEKEEN-------KLIPKTEISEKEVEKLKKA 272
Query: 304 Y---VKKLRSNAIIH 315
Y +KKL+ A+I
Sbjct: 273 YDLLLKKLKEQAVIQ 287
>gi|253575648|ref|ZP_04852984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251844986|gb|EES72998.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 398
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 98/277 (35%), Gaps = 22/277 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ T+NG IT + L + NG + A+ LI + L QE K+ IT
Sbjct: 131 AEAVATVNGVEIT------KDRLYEELAANGG--EQALTNLINQELVNQEAAKNNITITD 182
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V+ + G S E + L++ G+ + + + ++ +++ +
Sbjct: 183 ADVDAEIETYKTQFG-SEEALNQALEQYGMTMDDLLKQVEMELKLTKLLE----PQINVT 237
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ ++ + K+ +RT + + + V++ + A+ + L K +
Sbjct: 238 DEQVKETFETYKDSFNTPEQVRTSVILVATEEEAKD-IVKQLKEGADFAELAKSKSLDTA 296
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
K D + K ++ + P T +G + I + DK++
Sbjct: 297 TKDQGGDTDFFARGEMEEAVEE------AAFKLAKGEISEPVKTSEGYQVIKVTDKKEAH 350
Query: 280 GEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K + ++ +++ +RS A I
Sbjct: 351 TATLEEKKDEIRKSLISQQVSSMSGAWLEDVRSKAKI 387
>gi|78045210|ref|YP_359073.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Carboxydothermus hydrogenoformans Z-2901]
gi|77997325|gb|ABB16224.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Carboxydothermus hydrogenoformans Z-2901]
Length = 337
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 112/326 (34%), Gaps = 34/326 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--------------QKI 68
++ ++ V A +NG+ I+ D +R A ++ QK+
Sbjct: 7 VVAVLLTFVLALIVAGCGDYVAKVNGKTISKKDFDRRFAQVQADMKLRGVDLTSTEGQKM 66
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L++ + ++I E L + ++ I + + + S +DF L +
Sbjct: 67 LQSLKQQTLDQMINEILISEYGKEKKIEPTKDEITNKINEIRAQFP-SPQDFEKALKDRN 125
Query: 129 IGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
I D ++ + +Q I + V + ++ +K + T + +R +L
Sbjct: 126 ITDKDLQEMVRVQLINDKIYNEVTKGITVSEQEVKEYYEKHKNEPDFQTPEQRQVRHILI 185
Query: 186 SIPDNKLQNQ----------GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKA 234
++ D QN K++ + +++ KD L K S V G
Sbjct: 186 AVNDGNAQNNPHFNINVKRTDAEAKKLAEELIKQIKAGKDFATLAKEKSDDPGVKENGGQ 245
Query: 235 QYLLESDLHPQFQNL--LKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
++ +F++ K + T P T G I + + + +
Sbjct: 246 YTFSRGEMVKEFEDAAFALKKPGDITETPVKTAFGYHIIKLEKIIPARQKTYEEVKEQLK 305
Query: 292 NT--PTKIEKHEAEYVKKLRSNAIIH 315
N K + ++++ L+ A I
Sbjct: 306 NYLLEKKKREAYNKFLEDLKKKAKIE 331
>gi|332798476|ref|YP_004459975.1| Foldase protein prsA [Tepidanaerobacter sp. Re1]
gi|332696211|gb|AEE90668.1| Foldase protein prsA [Tepidanaerobacter sp. Re1]
Length = 300
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 114/310 (36%), Gaps = 32/310 (10%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIAL 62
T L K L + VL + + + + + + + + IN EVIT ++
Sbjct: 3 TILIKHKKFLASIIVLSLAIPLILSACNTSTSAKKADNNVVARINDEVITRDEL-----Y 57
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
L + NG+ + LI + + E +K IT V + A G E +
Sbjct: 58 DALVQENGDA---VLNSLIANKIVELEAKKQNITVSEEDVQKEVDKLAEQYG-GEEALTQ 113
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
FL+ G + K+ + + +++ ++ ++ NK +
Sbjct: 114 FLEMYGYSLDEIKENIKMNLNVKKLLEPTIKIEESEIKSYFDENKASFDTPE--QVKASH 171
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLES 240
+L + + V+++++D E D +L K S ++ G+ Y +
Sbjct: 172 ILV----DTEEKAKEVKQKLQDGE--------DFAELAKTYSTDTSNNQQGGELGYFSKG 219
Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT--PTKI 297
+ P+F+ ++P T+ G I + DK++ ++ +N K+
Sbjct: 220 QMTPEFEEAAFSLKAGEISDPVKTEFGYHIIKVEDKKEAKEATYEESKDEVKNILLEEKL 279
Query: 298 EKHEAEYVKK 307
+ ++++
Sbjct: 280 STAFSTWIQE 289
>gi|268682955|ref|ZP_06149817.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332]
gi|268623239|gb|EEZ55639.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID332]
Length = 357
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 79 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 138
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 139 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 189
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 190 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK--IYDQA 247
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 248 RNGTDFTGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 307
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 308 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 355
>gi|222474770|ref|YP_002563185.1| hypothetical protein AMF_031 [Anaplasma marginale str. Florida]
gi|255002737|ref|ZP_05277701.1| hypothetical protein AmarPR_00174 [Anaplasma marginale str. Puerto
Rico]
gi|255003870|ref|ZP_05278671.1| hypothetical protein AmarV_00169 [Anaplasma marginale str.
Virginia]
gi|222418906|gb|ACM48929.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 401
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 93/275 (33%), Gaps = 27/275 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---ALLKLQKINGEL 72
+ Y + V + S+ A S RI+ ++G+ IT D+S+R A G
Sbjct: 1 MLRYLLCCCALCVILASHHCCASSVRIKAVVDGKAITSLDVSRRTKANAFFYKTAHAGSD 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNY----FFVQHARNTGLSAEDFSSFLDKQG 128
+ +Q L+ E++ + E ++ GI+ + F GLS + + + G
Sbjct: 61 QGEVLQSLVDESVLELEAKELGISVGKRELEAEASKMFSVLGVCDGLSVGE---CVVQNG 117
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSI 187
+ + +L + IW ++ + ++ + K+ + V
Sbjct: 118 LDHKSVEDHLRSRVIWSKILATRVAPFLAVSDSDVENYVDEAKSAGLETVLDLEQVFVPF 177
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---GKAQYLLESDLHP 244
+ + + A L+K AS+ + ++ + L
Sbjct: 178 KAGNVLDSVLSELNKGVA-------------LDKIASRYREHAVYADRAVGVTASAFLPD 224
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+L+K P +G + + +K +
Sbjct: 225 VKISLVKAKVGQVIGPIRIDRGYLVLKLLNKVKVS 259
>gi|59802035|ref|YP_208747.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA 1090]
gi|59718930|gb|AAW90335.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA 1090]
Length = 333
Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 88/289 (30%), Gaps = 23/289 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 55 FSDGIAVVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 114
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 115 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 165
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 166 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRKI---YDQ 222
Query: 210 LRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
R D +++ + G + + + P F+ + P TQ G
Sbjct: 223 ARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGW 282
Query: 268 EYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 283 HIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 331
>gi|268597648|ref|ZP_06131815.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA19]
gi|268551436|gb|EEZ46455.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae FA19]
Length = 333
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 55 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 114
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 115 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 165
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 166 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK--IYDQA 223
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 224 RNGTDFTGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 283
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 284 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 331
>gi|240081552|ref|ZP_04726095.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA19]
gi|240124329|ref|ZP_04737285.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID332]
Length = 332
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 54 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 113
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 114 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 164
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 165 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK--IYDQA 222
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 223 RNGTDFTGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 282
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 283 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 330
>gi|268602234|ref|ZP_06136401.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18]
gi|268586365|gb|EEZ51041.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID18]
Length = 357
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 79 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 138
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 139 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 189
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 190 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRK--IYDQA 247
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 248 RNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 307
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 308 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 355
>gi|257455283|ref|ZP_05620518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter
aerosaccus SK60]
gi|257447245|gb|EEV22253.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter
aerosaccus SK60]
Length = 550
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 21/270 (7%)
Query: 28 VPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQ 78
P+V+ S + +N I + + +A Q L +
Sbjct: 130 TPVVTSSSQDQLIDGVIAIVNDTPILRSQLDRAVAQASAQLQAQNKPVPPAQQLYPQVLD 189
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGI-GDNHFKQ 136
+LI + ++ I++ G+ + N VN A+ G+ S +F LD Q G +Q
Sbjct: 190 QLITKQIQLDLIKRQGLQAEENAVNAALTNLAQQNGVASLAEFQQKLDAQRAGGYQALRQ 249
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
++ + + + + ++ + ++ + + RT+ +P
Sbjct: 250 KVSEDLAIQTLQQQQLASRIKISDQDVDNFLKSPESNALEKSQYRTLHIRVPFIADAAGK 309
Query: 197 FVQKRIKDAEESRLRLPKD-CNKLEKFASKIHDV--------SIGKAQYLLESDLHPQFQ 247
K+ K A ++ K+ + + D G Y + ++L +
Sbjct: 310 TSDKQKKQALTVATQIAKNLQAENANIEQIMTDAQANYNAQIQGGDMGYHVAAELPTELS 369
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+ + TNP T +G I + DKR
Sbjct: 370 KNITALEVGQVTNPIATAEGYNVIKLVDKR 399
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K+ + + ++ R +L S P L Q+ E+ R +D L SK
Sbjct: 397 DKRGGQQKIIDQWHTRHILIS-PSTALPADMAKQQIDTIYEKLRQ--GEDFATLASTYSK 453
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ E D+ P F++++K++ N+ + P+ TQ G + + +KR
Sbjct: 454 DPGSASNGGDLGWVSEGDMVPSFESMMKQTSVNDYSVPFQTQFGWHILKVDEKRQKDVSD 513
Query: 283 ALKAYLSAQNTPTKIEKHE-AEYVKKLRSNA 312
+ ++ + ++ ++++ LR+ A
Sbjct: 514 VYRKNMAREILYQRMAPQALDDWMQDLRAQA 544
>gi|254494588|ref|ZP_05107759.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 1291]
gi|268599899|ref|ZP_06134066.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11]
gi|268604500|ref|ZP_06138667.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1]
gi|268685120|ref|ZP_06151982.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae
SK-92-679]
gi|268687382|ref|ZP_06154244.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae
SK-93-1035]
gi|226513628|gb|EEH62973.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 1291]
gi|268584030|gb|EEZ48706.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae MS11]
gi|268588631|gb|EEZ53307.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae PID1]
gi|268625404|gb|EEZ57804.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae
SK-92-679]
gi|268627666|gb|EEZ60066.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae
SK-93-1035]
Length = 357
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 79 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 138
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 139 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 189
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 190 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK--IYDQA 247
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 248 RNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 307
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 308 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 355
>gi|118579840|ref|YP_901090.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter
propionicus DSM 2379]
gi|118502550|gb|ABK99032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter
propionicus DSM 2379]
Length = 352
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 93/301 (30%), Gaps = 15/301 (4%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEKIAVQELIV 82
S + +NG+ + ++ + L + E +K+A+ +L
Sbjct: 51 TPAASAQQQKDVVARVNGKPVYARELERVKKALLAGRPNQQIPSEHQKEFDKMALNQLTS 110
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L Q EK V Q + E+F + G+ ++ ++Y +
Sbjct: 111 AELLYQAGEKLDTKDIDKQVEAKMSQGKARFA-TTEEFQKAIAGLGMNESDLREYTRRDA 169
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + V+ F K + E + ++ + +R I + + +K
Sbjct: 170 VIANFVQQTFASKVTVSDEESRKFYDENQDKFKQSESVRASHILIGVDPKADPEIRKKAR 229
Query: 203 KDAEESRLRL--PKDCNKLEKFASK-IHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTT 258
+ AE+ R L D L + S G + + P Q Q +
Sbjct: 230 EKAEKLRKELAGGADFATLARENSTCPSSQQGGDLGFFPRGQMVPPFEQAAFSLKQGEVS 289
Query: 259 NPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ TQ G I + + KA + K+ Y+ R + I
Sbjct: 290 DVVETQFGYHIIKQMGHKNAETVSYADAKARIVDYLKNQKVNSAITAYLDDARKTSKIET 349
Query: 317 Y 317
Y
Sbjct: 350 Y 350
>gi|261378504|ref|ZP_05983077.1| SurA/PPIASE domain protein [Neisseria cinerea ATCC 14685]
gi|269145052|gb|EEZ71470.1| SurA/PPIASE domain protein [Neisseria cinerea ATCC 14685]
Length = 331
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 27/291 (9%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT +++ +A K +Q + L + + +L+ ++L Q +
Sbjct: 53 FSDGIAAVADNEVITRRRLAQAVADAKANLPKGVQISDTALTEQVLMQLVNQSLIVQAGK 112
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I + Q+ LSAE + + + V +
Sbjct: 113 RRNIQAGEAEIAAVVAQNPSLKNLSAEQ-----------RRELADSIIAEKVRQQAVMQN 161
Query: 152 FMLKYGNLEMEI-PANKQKMKNITV---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ ++ I A KQ + R+Y + +L R E
Sbjct: 162 SRVSEAEVDRFIEQAQKQGVTLPEGEPMRQYRAQHILIKADSENAAVGAESTIRKIYGEA 221
Query: 208 SRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265
R D + +++ + G + + + P F+ ++ + P TQ
Sbjct: 222 ---RSGTDFSSLARQYSQDASAGNGGDLGWFADGVMVPAFEETVRSLKPGQVSAPVRTQF 278
Query: 266 GVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I + + R+ G + + K E+ A+ ++ L S A +
Sbjct: 279 GWHIIKLNEVREAGTPQERVRNAVRQYIFQQKAERATADLLRDLHSGAYVD 329
>gi|148244641|ref|YP_001219335.1| hypothetical protein COSY_0492 [Candidatus Vesicomyosocius okutanii
HA]
gi|146326468|dbj|BAF61611.1| hypothetical protein [Candidatus Vesicomyosocius okutanii HA]
Length = 297
Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 16/297 (5%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84
++ + S+ +A+ + I +N ++IT IS I + L V + I
Sbjct: 9 LLLICVFSFNIFAIPNSIVAIVNDDLITFDQISIDIKPNYTKAQKLTL----VNQQIDLI 64
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L+ Q+I++ I N +N A N LS L + NH KQ L+++ +
Sbjct: 65 LQLQKIKQLSIVPKENVINSMLGNIALNNDLSLIQL-QSLPQFDKVINHVKQNLSLEGLK 123
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSI-PDNKLQNQGFVQKRI 202
+++N L ++EI K N + E IR +I N++ + ++ R+
Sbjct: 124 HFIIEN---LNIELTDVEISKQLSKTPNHLNKLEKQIRIAQITINSTNQVDSNRLIKDRL 180
Query: 203 KDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNP 260
D E ++ + L+K S+ + + ++ +L S L FQ LK + P
Sbjct: 181 IDLSE-KINKGDSFSILKKIYSQDNFYKNDSESIWLNLSKLPKAFQQSLKGLLVGEISQP 239
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + I DKR + + L A+ K + + +VKK+R A I +
Sbjct: 240 FKIGQVWRIVKIIDKRSVDNYLV---ELKAKLIRQKEDTYFYNWVKKIRKEAYIKIF 293
>gi|322418543|ref|YP_004197766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
gi|320124930|gb|ADW12490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
Length = 335
Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 94/285 (32%), Gaps = 17/285 (5%)
Query: 46 INGEVITDGDISKRIALLKLQK---------INGELEKIAVQELIVETLKKQEIEKSGIT 96
+NG IT +I + +L Q + + A+ +L + L QE K I
Sbjct: 49 VNGVAITRAEIERATRVLLSQSGAPQQLPPDAMQKASQAALDQLTMAELLYQEAAKIEIK 108
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V + ++ + + F L G+ + + ++ F K
Sbjct: 109 DLDQQVEKKIAE-SKALYPNPDAFEEALKGSGLTVAEMTRNARKSIMINTFIEKRFASKV 167
Query: 157 GNLEMEIPA--NKQKMKNITVRE-YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ E + + K T E +L + D Q K +A R++
Sbjct: 168 EVTDAEAQKFYQENQEKYFTRPENARASHILVKVDDKLTAEQKQQAKEKAEALLKRVKGG 227
Query: 214 KDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271
+D + K S ++G + P F+ + ++ +Q G I
Sbjct: 228 EDFAAVAKTESGCPSATVGGDLGTFGRGQMVPPFEKAVFAMKPGEISSVVESQFGFHIIK 287
Query: 272 ICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +K + G K + ++ K +V +L+S A I
Sbjct: 288 LVEKHEAGKVSYEEAKTKIFEYLKAERVRKEVTSFVDELKSKAKI 332
>gi|194099607|ref|YP_002002738.1| putative cis-trans isomerase [Neisseria gonorrhoeae NCCP11945]
gi|268595616|ref|ZP_06129783.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 35/02]
gi|293398076|ref|ZP_06642281.1| peptidyl-prolyl cis-trans isomerase SurA [Neisseria gonorrhoeae
F62]
gi|193934897|gb|ACF30721.1| putative cis-trans isomerase [Neisseria gonorrhoeae NCCP11945]
gi|268549005|gb|EEZ44423.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae 35/02]
gi|291611339|gb|EFF40409.1| peptidyl-prolyl cis-trans isomerase SurA [Neisseria gonorrhoeae
F62]
gi|317165096|gb|ADV08637.1| putative cis-trans isomerase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 333
Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 55 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 114
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 115 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 165
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 166 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRK--IYDQA 223
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 224 RNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 283
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 284 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 331
>gi|307546074|ref|YP_003898553.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata
DSM 2581]
gi|307218098|emb|CBV43368.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata
DSM 2581]
Length = 213
Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 74/195 (37%), Gaps = 11/195 (5%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIA 76
V +++ + RI +N I + + +R+A + Q L +
Sbjct: 17 LAPVGVMAQDARQPLDRIVAVVNEGAIMNSQLEERVARTRAQMEAQGVEVPPDDVLRQQV 76
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ L++E ++ Q ++ ++ D +N A+N ++ E F+ L+ G+ +
Sbjct: 77 LDRLVIEEIQLQMAREANLSVDDTELNRQVRAIAQNNDMTLEQFADALEADGLSLGVVRD 136
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + + + E E+ +Q+ N+T + R LF N
Sbjct: 137 QVRRELLMRQIQQRRVGSRVSISEAEVNRFIEQQGGNVTAEQ--ARQALFQRKANDEMEA 194
Query: 196 GFVQKRIKDAEESRL 210
+ R + + RL
Sbjct: 195 WVQEIRSQAFVDERL 209
>gi|170764243|ref|ZP_02639032.2| foldase protein PrsA [Clostridium perfringens CPE str. F4969]
gi|170714999|gb|EDT27181.1| foldase protein PrsA [Clostridium perfringens CPE str. F4969]
Length = 325
Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 108/305 (35%), Gaps = 34/305 (11%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE-------------- 71
+V A+ T+NGE IT G++ + +++ G+
Sbjct: 7 CNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQILQ 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ VQ L+ + + E +K GI V+ F + G ++F L+ +
Sbjct: 67 QRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMG---DNFDKALEAE 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G ++ FK++L Q I V+ +K + +++ ++ K + + ++ +LF
Sbjct: 124 GYTEDTFKEFLKNQVIAEATVEYATKDVKVSDEDIKKYYDENKQQFVVKAGADVKHLLFP 183
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA---SKIHDVSIGKAQYLLESDLH 243
+ QK + + + NK EK + ++G+ Y +
Sbjct: 184 T-------EEEAQKAYDEIQSGKTTFDDLFNKYEKNKDPKKEPIAENLGRVDYNNSNFDK 236
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ L + P + G I + D ++ + + + +K +
Sbjct: 237 DFMEGLKGLKDGEISKPVKSSFGYHIIKATNITDKETQLTEEQAKEQIISILENQKKKEA 296
Query: 304 YVKKL 308
Y K L
Sbjct: 297 YQKDL 301
>gi|239999806|ref|ZP_04719730.1| putative cis-trans isomerase [Neisseria gonorrhoeae 35/02]
gi|240014962|ref|ZP_04721875.1| putative cis-trans isomerase [Neisseria gonorrhoeae DGI18]
gi|240017410|ref|ZP_04723950.1| putative cis-trans isomerase [Neisseria gonorrhoeae FA6140]
gi|240116565|ref|ZP_04730627.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID18]
gi|240122031|ref|ZP_04734993.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID24-1]
Length = 332
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 54 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 113
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 114 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 164
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 165 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSKNAAVGAESTIRK--IYDQA 222
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 223 RNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 282
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 283 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 330
>gi|291042915|ref|ZP_06568656.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae DGI2]
gi|291013349|gb|EFE05315.1| peptidyl-prolyl cis-trans isomerase [Neisseria gonorrhoeae DGI2]
Length = 333
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 55 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 114
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 115 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 165
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 166 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK--IYDQA 223
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 224 RNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 283
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 284 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 331
>gi|77458207|ref|YP_347712.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens Pf0-1]
gi|77382210|gb|ABA73723.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens Pf0-1]
Length = 317
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 97/298 (32%), Gaps = 19/298 (6%)
Query: 35 SWAMSSRIRTTINGEVITDGDISK-----------RIALLKLQKINGELEKIAVQELIVE 83
A + + +NGE I++ + + +A ++ K +L + A+ LI +
Sbjct: 17 GMANNEPVAARVNGEAISEFRLERFFAEYLEDQGRAVASIRNPKAYKQLRQAALDTLIDK 76
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L QE K G+ D TV + G + + F L G + F +Y +
Sbjct: 77 ELLWQESRKRGVKIDEQTVREQVERTRTAIGGT-DKFLQRLQDAGFDEASFTEYTHRELA 135
Query: 144 WPDVVKNDFMLKY-GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ ++ + + + + + R +L + + +
Sbjct: 136 AQRMFAELTQVQAPDEQTVRAFFAEHRAEMAAPEQVQARHILIKVAGDADAATVEAARLR 195
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
+ + + + + + S+ S G Y + P F+ +
Sbjct: 196 LEELRAAIAGGQTFASVAQSGSEDVTASQGGDLGYFARGQMVPAFETAAFALKPGEVSEA 255
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T G I + + ++ ++ + + A + + + + +LR+ I
Sbjct: 256 VRTPFGWHLIFVENHKE-AADVPEEQGLETVRAYLARQQQTQARRQVLAQLRAENRIE 312
>gi|240113831|ref|ZP_04728321.1| putative cis-trans isomerase [Neisseria gonorrhoeae MS11]
gi|240118789|ref|ZP_04732851.1| putative cis-trans isomerase [Neisseria gonorrhoeae PID1]
gi|240126540|ref|ZP_04739426.1| putative cis-trans isomerase [Neisseria gonorrhoeae SK-92-679]
gi|240129002|ref|ZP_04741663.1| putative cis-trans isomerase [Neisseria gonorrhoeae SK-93-1035]
gi|260439674|ref|ZP_05793490.1| putative cis-trans isomerase [Neisseria gonorrhoeae DGI2]
Length = 332
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 21/288 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKKQEIE 91
S I + EVIT+ +++ +A K Q EL + + +L+ ++L Q +
Sbjct: 54 FSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQLVNQSLIVQAGK 113
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I ++ Q+ LS I +Q +Q +
Sbjct: 114 RRNIQASEAEIDAVVAQNPALKNLSPTQRREL--ADNIIAEKVRQQAVMQ-------NSR 164
Query: 152 FMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ +E + +Y + +L R +
Sbjct: 165 VSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK--IYDQA 222
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+++ + G + + + P F+ + P TQ G
Sbjct: 223 RNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWH 282
Query: 269 YIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + RD G E ++ + K + ++ L S A +
Sbjct: 283 IIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVD 330
>gi|332970909|gb|EGK09885.1| peptidyl-prolyl cis-trans isomerase [Psychrobacter sp. 1501(2011)]
Length = 487
Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 108/312 (34%), Gaps = 29/312 (9%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIV 82
+ ++ I +N I +++ +A + + L+ + LI+
Sbjct: 69 APISTRESTNGIIAIVNDTPILKSELASAVATAQARIQASGQPAPSPQRLQNDVLNGLIL 128
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLD-KQGIGDNHFKQYLAI 140
L+ ++++GI D N VN + A++ GL S + LD KQ + +
Sbjct: 129 RELQLDMVKRAGIRPDENAVNQSLGRLAQSQGLKSLTELQQALDAKQPGRYAAVRAQVIE 188
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + ++ + + ++ A + + + EY + D+ +
Sbjct: 189 EESLKALQQSQVARRVRITDHDVDAFLASPEAQKLQSTEYRTIHIRVPFSDDYNRITDSE 248
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS---------IGKAQYLLESDLHPQFQNL 249
+K + L K + + S++ + G + + L
Sbjct: 249 KKAAMQIAQQAQELLKSSDDADMVLSQLSAGTAKNYIAPVQGGDMGFHPAAGLPIDIAKQ 308
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-------AQNTPTKIEKHE 301
+ + T P +T +G++ + + DK I + + +N+ E+
Sbjct: 309 ITPLEIGQVTEPQITPEGIDIVKLVDKHTNDNMIIPQWKVRHILVKTDERNSDALAEQKI 368
Query: 302 AEYVKKLRSNAI 313
+ ++LR +A
Sbjct: 369 NDLYEQLRRDAD 380
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+++ +K N+ + ++ +R +L + ++ + +++I D E +LR D
Sbjct: 326 GIDIVKLVDKHTNDNMIIPQWKVRHIL--VKTDERNSDALAEQKINDLYE-QLRRDADFA 382
Query: 218 KLEKFASKIHDVSIG--KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
L S + ++ E + P+F+ ++K++ + + P+ +Q G + +
Sbjct: 383 SLAATYSDDPGSAGRGGDLDWVAEGQMVPEFEEMMKRTPEGDYSTPFKSQFGWHILKVEG 442
Query: 275 KRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
R + + + + +++++LR+NA + +
Sbjct: 443 VRQKDVSDTVKRNLAREALYQRLAPQAQEDWLQELRANAYVEVF 486
>gi|220904185|ref|YP_002479497.1| SurA domain-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868484|gb|ACL48819.1| SurA domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 311
Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 98/300 (32%), Gaps = 32/300 (10%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGELE---------KIAVQELIVET 84
A +++ +NG+VIT D+ K + + + + + +I++
Sbjct: 21 AAQLNKVAAVVNGQVITMFDLQKNALPDMARARLNPDNPADAKQVDAIFRKVLDMMIMDI 80
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L QE + ++ ++ + + ++ + F L +Q + + +
Sbjct: 81 LIAQEARRLKVSVSPADIDNEIAKLMQGRNMTKQQFEEQLARQKSSVAELRGNIEKSLLR 140
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRI 202
++ + K EI A + K+ + +++S N +
Sbjct: 141 QKIMSMEVGRKVVVTPEEIRAYYEAHKDTMYDRNGLHMGVMVYSPKVNAASIAAQI---- 196
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPY 261
R K++ + G + L+P+++ L K + T +
Sbjct: 197 ------RSGALTFEEAARKYSIAPNKEKGGDMGPVEWDRLNPEWEGRLTKMKPGDVTELF 250
Query: 262 VTQKGVEYIAICDKRDLGGEIA------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
Q + R GG + K + A K + +Y +LRS A+I
Sbjct: 251 DLQG--HKAQVHLFRPGGGGVKMLSLEEAKPQIDAILRQPKAMERFDDYTGQLRSKAVID 308
>gi|118474339|ref|YP_892696.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
gi|118413565|gb|ABK81985.1| putative periplasmic protein [Campylobacter fetus subsp. fetus
82-40]
Length = 275
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 56/296 (18%), Positives = 101/296 (34%), Gaps = 31/296 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+F V ++ + + + E ITD +I + + + + + A+ LI
Sbjct: 4 IVFLTVFLLGILHAEYVNGLVAIVENEPITDYEIQQVMTKMNISPND------ALSVLIR 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E L+ +I GI+ D+ + A+ G+ F + ++ +GI FK +
Sbjct: 58 ERLEDAQIRTLGISADNYEADEKIAALAQANGIDVTTFKNVIESRGISSEDFKNDIKTGI 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ N+ E Y +F + + R
Sbjct: 118 KKEKLYARILNNPSQNITPENARRF----------YEANPKMFVQFEKISVTKYLTNNRQ 167
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPY 261
E S+ + S VSI L +L+PQ + LL + + T +
Sbjct: 168 SLNEISKNPM-----------SVQPGVSIENVV-LESKELNPQLRYILLNTKKGSFTPIF 215
Query: 262 VTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T G E + K L +++ + A + E A+Y KLR A I
Sbjct: 216 QTADGFEIFYVYSKEGSYLPDFNSIEKEVVAAMASQEQEIAVADYFNKLRVKANIE 271
>gi|187777480|ref|ZP_02993953.1| hypothetical protein CLOSPO_01048 [Clostridium sporogenes ATCC
15579]
gi|187774408|gb|EDU38210.1| hypothetical protein CLOSPO_01048 [Clostridium sporogenes ATCC
15579]
Length = 348
Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 53/337 (15%), Positives = 106/337 (31%), Gaps = 45/337 (13%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+ +L ++ F +V A + +NGE I D+ + L ++
Sbjct: 20 LSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLEENPRLKQVVNQMKMQ 79
Query: 71 ----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHA 110
E + + ELI E + Q+ ++ + V+ F +
Sbjct: 80 YGEEFEKSEQGKEVLKEQKSQILDELITEKVLLQKGKELKVIPKDEELNKEVDKKFNEIK 139
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ F L G K+YL Q I V+ E + +
Sbjct: 140 AVYNNDEKKFEETLKSTGFTKETLKEYLKSQIIIEKVIN------------EATKDVKVE 187
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFA----- 223
+ Y +F+ N + + K +A++ + RL +D K+ K
Sbjct: 188 DKDAKKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDSKEDFAKVAKEVSQDPG 247
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--- 280
SK +G Y + + + Q +N TQ G I I K++
Sbjct: 248 SKDKGGLLGDINYNDANFDPTFMKAAIALKQGAVSNAVHTQFGYHIIKINSKKEYPVKKY 307
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + E + + +++ + + I Y
Sbjct: 308 DAVKEDIKKELKMEKQKEAYTKK-IEEWKKASKIKTY 343
>gi|237756622|ref|ZP_04585137.1| SurA N- domain family [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691220|gb|EEP60313.1| SurA N- domain family [Sulfurihydrogenibium yellowstonense SS-5]
Length = 290
Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 57/319 (17%), Positives = 118/319 (36%), Gaps = 48/319 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISKRIALLKL 65
+K + V ++ V + ++ + A + ++ +NGE + D+ +
Sbjct: 1 MKKTSILNVFLMLLTVLLFTFNNKAKAEDGYRLFDKVVLVVNGEPVLKSDLEFAKNWYNI 60
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFL 124
+ +K A +++I L Q+ + GI+ ++ + A+ G+ E F L
Sbjct: 61 KD-----DKEAEEKIINSFLLAQQARRMGISVSPREIDNAVLNIAKANGIDDLETFKKKL 115
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ GI + K++LA + ++ K +E K L
Sbjct: 116 EDSGISYSKLKEFLARDMLANRLLHLYMREKASKGIIEGDKEDVKTVR-----------L 164
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLE 239
I N+ Q + K K+ + N +FASK D + G + +
Sbjct: 165 IFISKNRPDYQEVLSKLDKELNK---------NNFSEFASKYSDDKFTAENKGLIGEIKK 215
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
DL + + + T +G+ +I I + + K A+ + ++EK
Sbjct: 216 GDLVKELDEAIFSHKAGDIFKVETNEGMYFIYIEKEEN-------KLTPKAEMSEKEVEK 268
Query: 300 HEAEY---VKKLRSNAIIH 315
+ EY ++KL+ A+I
Sbjct: 269 LKKEYDLLLRKLKERAVIQ 287
>gi|170760531|ref|YP_001788878.1| peptidylprolyl isomerase [Clostridium botulinum A3 str. Loch Maree]
gi|226712004|sp|B1KTE0|PRSA_CLOBM RecName: Full=Foldase protein prsA; Flags: Precursor
gi|169407520|gb|ACA55931.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
A3 str. Loch Maree]
Length = 335
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/343 (14%), Positives = 107/343 (31%), Gaps = 44/343 (12%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
S + +L ++ F +V A + +NGE I D+ + ++
Sbjct: 1 MRSAKKLLSVLCLGVFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDENPRFKQV 60
Query: 66 ------------------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
+++ E + + ELI E + Q+ ++ + + +
Sbjct: 61 VSQMKMQYGEEFEKSEQGKEVIKEQKSQILDELITEKVLLQKGKELKVIPKDEELNKEAD 120
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + F L G K+YL Q + V+ G +
Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVIN---EATKGVKVEDK 177
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR------LPKDCN 217
A K Y +F+ N + + K +A++ + R K
Sbjct: 178 DAQK---------YYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAK 228
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
++ + SK +G Y + + + + +NP TQ G I I K++
Sbjct: 229 EVSQDGSKDKGGLLGDISYSDSNLDPTFLKAAIALKEGAISNPVHTQFGYHIIKINSKKE 288
Query: 278 LGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + E + + +++ + + I Y
Sbjct: 289 YPVKKFDAVKEDIKKQLKQEKQQEAYTKK-IEEWKKASKIKIY 330
>gi|294789088|ref|ZP_06754327.1| putative PPIC-type PPIASE domain protein [Simonsiella muelleri ATCC
29453]
gi|294482829|gb|EFG30517.1| putative PPIC-type PPIASE domain protein [Simonsiella muelleri ATCC
29453]
Length = 315
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 101/283 (35%), Gaps = 23/283 (8%)
Query: 24 IFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQKI-----NGELE 73
I + +++ A + + T +N +IT GDI + + LL+ N EL
Sbjct: 6 IITLASLLAIHFQAAAEIRVLNGVATEVNASIITYGDIERTVRLLRSNPASASISNEELA 65
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K A Q+L+ L ++ G+ S ++ + A + E+ + K G +
Sbjct: 66 KTAKQQLMERALLVYAAKEQGLKVTSAEIDAELNRRATAAHTTVENLFNQTKKLGWSRDA 125
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--------REYLIRTVLF 185
++ +A + ++ + +I A + + Y +R ++
Sbjct: 126 YRLEVAKDLLVGRMID-RMNESVEVSDNDIQAYINQAQKDGQVVPSGNPYTVYNVRRIVL 184
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
I +N V R+K ++ D L K S+ + L E+ +
Sbjct: 185 KINENN--KAAAVGDRMKLI-AKSVQSGSDFGTLAKRYSQEAAAAQNGVVELPENSQPEK 241
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ +L+ + T+ P T + + + + KR +
Sbjct: 242 VEAMLQLLKVGETSAPIQTTQNWQMLQMLGKRTEIDPTKTQRE 284
>gi|222056577|ref|YP_002538939.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
gi|221565866|gb|ACM21838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
Length = 340
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/339 (13%), Positives = 109/339 (32%), Gaps = 39/339 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSY-------KSWAMSSRIRTTI------------NGEVITD 53
K ++ L +F I + + + A ++ T+ NG +IT
Sbjct: 3 AKKISLVAALAVFAIQSMPALGAEPQKTAASAEQKEVKETVKKVSPSDPVAKINGTIITR 62
Query: 54 GDISKRIALLKLQK---------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
++ + + +L Q + E+ A+ +LI L Q +K+ I +
Sbjct: 63 KELDRAVKVLVAQNRLPQALPPEQQKQAEEAALDQLISAELMYQAGQKTEIKDIDKQIEE 122
Query: 105 FFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ E+F L + + K++ + ++ + + E +
Sbjct: 123 KIA--LNRAKFPNPEEFDKALKSVEMSEKDLKEFTRKDIVITAFIEKNIISNINVAEADA 180
Query: 164 PA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ K +L + + + + +++ +D L K
Sbjct: 181 KKFYDDNTEKFKQDESIRASHILIGVDAKAGEEDKKKAREKAEGILKKIKAGEDFATLAK 240
Query: 222 FASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD-- 277
S G + + F+N ++ TQ G I + +K++
Sbjct: 241 AESTCPSSKQGGDLGTFPKGQMVAPFENAAFALKPGEVSDVVETQFGYHIIKLAEKKEAG 300
Query: 278 -LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K + KI+K +Y+++L+S A
Sbjct: 301 MVKFDEV-KTKIVDYLKSQKIQKGVGDYLEELKSKAKTE 338
>gi|262372454|ref|ZP_06065733.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205]
gi|262312479|gb|EEY93564.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205]
Length = 442
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 95/282 (33%), Gaps = 14/282 (4%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL---- 62
T+L + + ++ ++ + + + ++ VI D+ + IA
Sbjct: 3 TTLMKINSIQHIFRATVLAALISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGIAETEHQ 62
Query: 63 LKLQKINGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSA 117
LK Q ++ + +LI+ + +++++ GI D ++N ++ A +G +
Sbjct: 63 LKAQNKTVPPQQYLQMQVLDQLIIRQAQLEQVKRYGIKADEKSLNAAVLKVANQSGATTL 122
Query: 118 EDFSSFLDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
E F LD + + +A + + M + ++++ +
Sbjct: 123 EAFQQKLDAIAPGTYENLRNRIAEDLAIGRLRQQQVMSRIKISDLDVENFLNSPEGQAAL 182
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ I + N QK + + + K ++ V +
Sbjct: 183 GTQAHVIHMRISGD---NAAEAQKVALEVKNALTNSDDPKAISSKLSTSSVKVDGADMGF 239
Query: 237 LLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRD 277
S++ + + TT + G+ + + +++
Sbjct: 240 RSLSEIPTELAARITPLKIGQTTELINVRDGIHVLKLLERKQ 281
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 65/167 (38%), Gaps = 7/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ G +++ KQ + V +Y R +L + ++ K++ D+ +R +
Sbjct: 266 NVRDGIHVLKLLERKQNDQKALVDQYQTRHILIQPSEVVSLDRA---KQMIDSLYNRAKA 322
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
+D L S + G ++ + +F+ +K + + P+ TQ G
Sbjct: 323 GEDFATLAATYSNDTGSARDGGSLGWVSPGVMVAEFEQTMKNTPVGQISKPFQTQFGWHI 382
Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + D R + + + + ++++LR+NA +
Sbjct: 383 LQVMDTRQQDMTKEVQERMARQILGERQFDTEVDTWMRELRANAYVE 429
>gi|153007317|ref|YP_001381642.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
gi|152030890|gb|ABS28658.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
Length = 317
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 95/285 (33%), Gaps = 19/285 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE----LEKIAVQELIVETLKKQEIEKSG 94
+ +NGE I +++ + G+ L + + EL+ TL QE
Sbjct: 33 APPAVALVNGEPIGADVLARELREASAGDARGDGGDVLRRRLLDELVDRTLLLQEARARS 92
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I + V F++ + F L +Q + K LA Q + +
Sbjct: 93 IVVGQDQVERAFLRVRAEYPGT--HFDDLLAQQRLSQADLKARLADQLTVERLFEEQVYP 150
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + EI Q+ E+ + + + + R E+ R R P+
Sbjct: 151 QVQVSDAEI----QRYFADHAAEFEEPEKVHVLQVVVASKEEALAVR----EKLR-RNPQ 201
Query: 215 DCNKLEKFASKIHDVS-IGKAQYL-LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
++ + +S + G Y+ S F N ++ + G +
Sbjct: 202 TFAEVARKSSIAPEGKGGGDLGYIGRGSGFPEVFDVTFTLPLNRVSDVTPSPYGFHIFKV 261
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
D+R + ++A+ K + + +YVK LR A I
Sbjct: 262 VDRRAAQRRTLEQARGDIAAKLAREKRAQVQQDYVKGLRERARIE 306
>gi|294650562|ref|ZP_06727919.1| peptidyl-prolyl cis-trans isomerase SurA [Acinetobacter
haemolyticus ATCC 19194]
gi|292823559|gb|EFF82405.1| peptidyl-prolyl cis-trans isomerase SurA [Acinetobacter
haemolyticus ATCC 19194]
Length = 437
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 97/279 (34%), Gaps = 19/279 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQK 67
IK F + + S S+A + + ++ VI D+ + IA LK Q
Sbjct: 3 IKHFQHIFRATVLAALISSSMHSFAQPADEVVAIVDSSVILKSDLVQGIAEAEHQLKAQN 62
Query: 68 INGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSS 122
++ + +LI+ + +++++ GI D N++N ++ A +G S F
Sbjct: 63 QTVPPKQYLQMQVLDQLIIRQAQLEQVKRYGIKPDENSLNAAVLRVANQSGSNSLSAFQQ 122
Query: 123 FLDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
LD I + + +A + + M + + ++ +K+ + L
Sbjct: 123 KLDA--IAPGTYENLRNRIAEDLAIGRLRQQQVMSRIKISDHDVE---NFLKSPEGQAAL 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
V N VQK ++ S K ++ V +
Sbjct: 178 GTQVHVLHMRISGTNNNEVQKVAEEVRRSLATSNDPKAISSKLSTGTVTVDGADMGFRAL 237
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
S++ + + Q TT + G + + +++
Sbjct: 238 SEIPTELAARVTPLQVGQTTGLVNVRDGTHVLKLLERKQ 276
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ G +++ KQ + V +Y R +L + ++ K++ D+ +R++
Sbjct: 261 NVRDGTHVLKLLERKQNDQRALVPQYKTRHILIQTSEVVSSDRA---KQMIDSLYNRIKA 317
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
+D + L S + G ++ S + P+F+ ++K+ + P+ +Q G
Sbjct: 318 GEDFSTLAATFSNDPGSARDGGNLGWVNASVMVPEFEKVMKEIPVGQLSEPFQSQFGWHI 377
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
+ + D R + ++ Q + E + ++LR+NA +
Sbjct: 378 LEVTDTRQQDMTKEAQERMARQILGERQFETEVDSWTRELRANAYVE 424
>gi|21675072|ref|NP_663137.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium tepidum TLS]
gi|21648311|gb|AAM73479.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium tepidum TLS]
Length = 438
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 105/310 (33%), Gaps = 17/310 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KIN 69
K+L ++ + + RI + E+I D++++ +L LQ + +
Sbjct: 3 KVLFAVLAALMIAMNGFADAAASTGLDRIVAIVGNEIILASDVNEQELMLHLQYPETRKD 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+L K ++ +I + + + + + D +V+ + S+ + G+
Sbjct: 63 PQLRKRILENMINQKIILTKAKIDTVKVDEKSVDDQAAARYSSLRAGFPSVSAMESRFGM 122
Query: 130 GDNHFKQYLAIQS----IWPDVVKNDF-MLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
N KQ++ + + +F + E N++K E + + +
Sbjct: 123 PVNRLKQHIREDIRDQQMIEAFRRKNFHEVTVSYDETMAFYNQEKGALPEAPETVSVSQI 182
Query: 185 FSIP-DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
+P ++ Q + K A + +L L + S G + + +
Sbjct: 183 IKMPLVSEAARQAALDKIK--AVQQQLEAGGSFATLAREYSDDPGSREKGGDLGFTRKGE 240
Query: 242 LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
L P F+ + T+ G I + DK G I + L+ +
Sbjct: 241 LVPSFEEAASVLKPGQISGIVETRFGYHIIQLIDKE--GDRIHTRHILALFDRSKTDIPA 298
Query: 301 EAEYVKKLRS 310
+K +R
Sbjct: 299 TIALLKSIRK 308
>gi|258545949|ref|ZP_05706183.1| peptidyl-prolyl cis-trans isomerase SurA [Cardiobacterium hominis
ATCC 15826]
gi|258518827|gb|EEV87686.1| peptidyl-prolyl cis-trans isomerase SurA [Cardiobacterium hominis
ATCC 15826]
Length = 433
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 92/267 (34%), Gaps = 15/267 (5%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK------LQKINGELEKIAVQELIV 82
+ I +N E IT +++ I + L+ GELE ++ +I+
Sbjct: 29 ASAPKGASQPIDEIGLVVNDEAITRRQLTQEIEAARRNLPKELKLPAGELEHQLLEHVIM 88
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-SSFLDKQGIGDNHFKQYLAIQ 141
L Q +K G+ + +N Q A +S + + G+ + F++ +
Sbjct: 89 NHLLAQIEKKVGLEISEDELNTAIAQIAGRNKVSEQKLYAQAQRDTGLSRDAFREQVRKS 148
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG--FVQ 199
+ + E ++ K+ ++ +L +P+ Q++
Sbjct: 149 LAQEHMKEGMVGADINITERQVDEYIAKLAREQGSTIHVQDLLIPLPEGDAQSRAGEVDA 208
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--T 257
K + ++ R L++ ++++ + + P+F L K
Sbjct: 209 KIREVSQALR----DSGGNLQQASARVAGARYNDLGDVNLGRIPPRFARALAKLGAGEIV 264
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL 284
+P V G+ ++ + K G L
Sbjct: 265 ESPVVDDDGMHFLKVASKHSAEGNYTL 291
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 85/295 (28%), Gaps = 57/295 (19%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA--------------- 117
+ + L E +K+ + + I V+ + + AR G +
Sbjct: 142 REQVRKSLAQEHMKEGMVG-ADINITERQVDEYIAKLAREQGSTIHVQDLLIPLPEGDAQ 200
Query: 118 ----------EDFSSFLDKQGIGDNHFKQYLA-----------------------IQSIW 144
+ S L G +A +
Sbjct: 201 SRAGEVDAKIREVSQALRDSGGNLQQASARVAGARYNDLGDVNLGRIPPRFARALAKLGA 260
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++V++ + G +++ + N T+ E + +L D + N K D
Sbjct: 261 GEIVESPVVDDDGMHFLKVASKHSAEGNYTLAEADVSHILLRNNDGRDDNS----KARID 316
Query: 205 AEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY 261
A L+ D L + S G ++ + ++ + + P
Sbjct: 317 AIYRELQAGADFASLARRYSEDAQSAAKGGDLGWVSADQFGGELAQAIETQAVGSISKPI 376
Query: 262 VTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T G + + ++R E ++ + +++ + ++ LR A I
Sbjct: 377 KTPYGYHILLVRERRQSDKSEAVVREQIKRNLYAKALDEAWQQRLQSLRREAYID 431
>gi|262375382|ref|ZP_06068615.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145]
gi|262309636|gb|EEY90766.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter lwoffii SH145]
Length = 440
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 103/279 (36%), Gaps = 25/279 (8%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKING 70
+K + L + + ++ + ++ +I D+++ +A + +LQK
Sbjct: 11 LKQIFKATALALCLSSAMTTFAVAQPKDEVVAVVDNSIILRSDLAQGVAEISHQLQKQKK 70
Query: 71 E------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSF 123
LE+ A+++LI+ + +++++ I D +N ++ AR++G S E F
Sbjct: 71 AVPPQQYLEQQALEQLIIRQAQLEQVKRYNIRPDEKALNEAVLKVARDSGSPSLEAFQQK 130
Query: 124 LDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREY 178
LD + N + + +A + + + + ++ + + +
Sbjct: 131 LDA--MAPNTYASLRNRIAEDLALNRLRQQIVTSRIQITDQDVKNFLNTPQGQALLGSQV 188
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ + +N Q V++ + + + + +K+++ V
Sbjct: 189 HVLHLR-VSGENAEQIATQVKQELNSSNDIQ-------AIGKKYSTGGVKVEAADMGVRN 240
Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
S++ + + T+ GV + + +++
Sbjct: 241 LSEIPAELAARVTTLQPGQTSELIPVADGVHVLKLLERK 279
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 60/154 (38%), Gaps = 7/154 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K + V +YL R +L + K++ D+ +RL+ +D L S
Sbjct: 278 RKGGEQKALVPQYLTRHILIQPSEVVSPENA---KQMIDSLYNRLKQGEDFTVLASTFSN 334
Query: 226 IHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + P+F+ +K + + P+ +Q G + + + R
Sbjct: 335 DTGSARDGGSLGWVSPGVMVPEFEQQMKSTPVGQFSKPFQSQFGWHILQVSETRQQDMTQ 394
Query: 283 ALKAYLSAQNTPT-KIEKHEAEYVKKLRSNAIIH 315
+ ++ Q + + ++++ R+NA +
Sbjct: 395 EYQERMARQLLSERQFDAELDSWLRETRNNAYVE 428
>gi|91205025|ref|YP_537380.1| hypothetical protein RBE_0210 [Rickettsia bellii RML369-C]
gi|122426012|sp|Q1RK23|Y210_RICBR RecName: Full=Uncharacterized protein RBE_0210; Flags: Precursor
gi|91068569|gb|ABE04291.1| unknown [Rickettsia bellii RML369-C]
Length = 294
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 103/302 (34%), Gaps = 27/302 (8%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEK 74
++ I + + A +S I +N E IT + R ++ N +L
Sbjct: 4 LLLIITVFFTCSAVAETSNIVALVNNEPITLNEFRARKKMIMALNNVEEVTPAQNKQLSD 63
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
IA++ LI E+L Q ++ + +L + + + F
Sbjct: 64 IAIKSLIDESLLFQYYGDK--EISQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPDSF 121
Query: 135 KQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + I + ++ N E+++ K E + +F+ D +
Sbjct: 122 ISQIKSELIKMNVLSGLSRSVQVSNKEIDVAILSSDQK-----EVEVSMQIFTSKDKSDK 176
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KK 252
+ + +L K+C+ ++K S + + S + Q ++
Sbjct: 177 TFAQM-------NNLKSKL-KNCSDVKK--SLYENFATMTVITDKLSKIEEAKQTIVKDL 226
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ N T+N + E + +C K+ L Y+ T KI + ++ + + A
Sbjct: 227 NPNQTSNVFEKYNEFEIVQVCTKKILNISEDENNYVVNFLTNKKISQKAQKFFEDMHKKA 286
Query: 313 II 314
I
Sbjct: 287 YI 288
>gi|296125998|ref|YP_003633250.1| SurA domain protein [Brachyspira murdochii DSM 12563]
gi|296017814|gb|ADG71051.1| SurA domain protein [Brachyspira murdochii DSM 12563]
Length = 317
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 94/296 (31%), Gaps = 24/296 (8%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSGITF 97
I + IT D R + L LQ + + ++L+ E + ++++
Sbjct: 26 SIVGIVGSMPITYEDFISRKSFLTLQAKSIGQKINDDMVYKDLVEERIMYLKLKEYNYVI 85
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ N V+ A+ ++ + F+ L +GI ++ + Q ++ +
Sbjct: 86 EENDVSRRLENIAKQYNMTLDQFAKQLMAEGISYEEYRNSIRKQIAMENL-NGLVVNNTE 144
Query: 158 NLEMEIPANKQKMKNITVREY--LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E K+ + E L++ +G Q+ K R +D
Sbjct: 145 ITDEEADEFYNNTKDKSAFEVDTLVQLSWIFFKAATFTEKGEKQELAKQVRGMAAR-GQD 203
Query: 216 CNKLEKFASKIHDV--SIGKAQYLLESD-----LHPQFQNLLKKSQ-----NNTTNPYV- 262
+L + S + + G Y L D L Q L ++ ++
Sbjct: 204 FAELARKYSDDNATKNNGGDLGYNLLYDAGKRSLPAQINAGLNLAKRGYKVGTVSSVREL 263
Query: 263 TQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KG + I +D+ + ++ +++ + + Y
Sbjct: 264 VGKGFYIVKIVGIEKDMESIRTRVKNYLGEM---QMRDSFVKWLDEETKRVSVQLY 316
>gi|157804053|ref|YP_001492602.1| hypothetical protein A1E_04460 [Rickettsia canadensis str. McKiel]
gi|157785316|gb|ABV73817.1| hypothetical protein A1E_04460 [Rickettsia canadensis str. McKiel]
Length = 295
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 102/303 (33%), Gaps = 29/303 (9%)
Query: 24 IFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
+ I+ IV + A +SR I ++N E IT + R ++ + +L
Sbjct: 4 LLLIIGIVFTFNVAQASRPNIVASVNDEPITLNEFLARKKMIIALNNVESLTPAQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A++ LI E+L Q ++ + +L + +
Sbjct: 64 DLAIKSLIDESLLFQYAGDR--EITQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPGS 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 FIAQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSKH 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
+ + RL K C +++ S + + + S + Q ++
Sbjct: 174 SGNTAFTQ----MNNLKNRLKK-CTDVKQ--SLYDNFATMQIITNKLSKIEDVQQTIIKD 226
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ N +N + E I +C K+ L Y+ T KI + + + +R
Sbjct: 227 LTPNKASNVFEVNNKFEIILVCSKKILNLNEDENNYVVNYLTNKKISQKAQKIFENMRKK 286
Query: 312 AII 314
A I
Sbjct: 287 ASI 289
>gi|283954909|ref|ZP_06372425.1| hypothetical protein C414_000260181 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793749|gb|EFC32502.1| hypothetical protein C414_000260181 [Campylobacter jejuni subsp.
jejuni 414]
Length = 271
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 84/298 (28%), Gaps = 36/298 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + +LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNK------ALGILIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + + Y V + +N + +
Sbjct: 118 EKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINVNIYLSNNPQTLENIKNTKK 177
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
+ L + L S + +
Sbjct: 178 ITLKSQNASLNTS------------NADPRLLG--LLSQIPN----------GGFSPVLN 213
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316
+ G E + +K G + + + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEVKNK--DGAQTPEYKQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|110799431|ref|YP_697171.1| peptidylprolyl isomerase [Clostridium perfringens ATCC 13124]
gi|123049564|sp|Q0TMG9|PRSA_CLOP1 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|110674078|gb|ABG83065.1| putative foldase protein PrsA [Clostridium perfringens ATCC 13124]
Length = 342
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/326 (15%), Positives = 107/326 (32%), Gaps = 31/326 (9%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LL 63
S+ + ++ +V A+ T+NGE IT G++ +
Sbjct: 1 MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA 60
Query: 64 KLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYF 105
+++ G+ + VQ L+ + + E +K GI V+
Sbjct: 61 QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ 120
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
F + G ++F L+ +G ++ FK + Q I V++ + + +
Sbjct: 121 FENIKKGMG---DNFDKALEAEGYTEDTFKDVIKNQVI-NQAVQDYIIKDVKVTDEDAQK 176
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ K ++++ + +N+ QK + + + K E S+
Sbjct: 177 YYDENK----QQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKSE 232
Query: 226 IHDVSIGKAQYLLESD--LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ + L +F + LK + + P TQ G I + G ++
Sbjct: 233 NKKPIAENLGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQL 292
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL 308
S K +K ++ +
Sbjct: 293 PFDDVKSQIIQILKQQKDSEKFKADM 318
>gi|226952980|ref|ZP_03823444.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ATCC 27244]
gi|226836301|gb|EEH68684.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. ATCC 27244]
Length = 437
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 97/279 (34%), Gaps = 19/279 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIAL----LKLQK 67
IK F + + S S+A + + ++ VI D+ + IA LK Q
Sbjct: 3 IKHFQHIFRATVLAALISSSMHSFAQPADEVVAIVDSSVILKSDLVQGIAEAEHQLKAQN 62
Query: 68 INGELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSS 122
++ + +LI+ + +++++ GI D N++N ++ A +G S F
Sbjct: 63 QTVPPKQYLQMQVLDQLIIRQAQLEQVKRYGIKPDENSLNAAVLRVANQSGSNSLSAFQQ 122
Query: 123 FLDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
LD I + + +A + + M + + ++ +K+ + L
Sbjct: 123 KLDA--IAPGTYENLRNRIAEDLAIGRLRQQQVMSRIKISDHDVE---NFLKSPEGQAAL 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
V + VQK ++ S K ++ V +
Sbjct: 178 GTQVHVLHMRISGTDNNEVQKVAEEVRRSLATSNDPKAISSKLSTGTVTVDGADMGFRAL 237
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
S++ + + Q TT + G + + +++
Sbjct: 238 SEIPTELAARVTPLQVGQTTGLVNVRDGTHVLKLLERKQ 276
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 68/167 (40%), Gaps = 7/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ G +++ KQ + V +Y R +L + ++ K++ D+ +R++
Sbjct: 261 NVRDGTHVLKLLERKQNDQRALVPQYKTRHILIQTSEVVSSDRA---KQMIDSLYNRIKA 317
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
+D L S + G ++ + P+F+ ++K+ + P+ +Q G
Sbjct: 318 GEDFATLAATFSNDPGSARDGGNLGWVNAGVMVPEFEKVMKEIPVGQLSEPFQSQFGWHI 377
Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + D R + A + + E + ++LR+NA +
Sbjct: 378 LEVTDTRQQDMTKEAQERMTRQILGERQFETEVDSWTRELRANAYVE 424
>gi|157827644|ref|YP_001496708.1| hypothetical protein A1I_06775 [Rickettsia bellii OSU 85-389]
gi|157802948|gb|ABV79671.1| hypothetical protein A1I_06775 [Rickettsia bellii OSU 85-389]
Length = 294
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 102/302 (33%), Gaps = 27/302 (8%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELEK 74
++ I + + A +S I +N E IT + R ++ N +L
Sbjct: 4 LLLIITVFFTCSAVAETSNIVALVNNEPITLNEFRARKKMIMALNNVEEVTPAQNKQLSD 63
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
IA++ LI E+L Q ++ + +L + + F
Sbjct: 64 IAIKSLIDESLLFQYYGDK--EISQEEIDNAIKSIEDRNKMPHGSLLQYLKSISVNPDSF 121
Query: 135 KQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + I + ++ N E+++ K E + +F+ D +
Sbjct: 122 ISQIKSELIKMNVLSGLSRSVQVSNKEIDVAILSSDQK-----EVEVSMQIFTSKDKSDK 176
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KK 252
+ + +L K+C+ ++K S + + S + Q ++
Sbjct: 177 TFAQM-------NNLKSKL-KNCSDVKK--SLYENFATMTVITDKLSKIEEAKQTIVKDL 226
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ N T+N + E + +C K+ L Y+ T KI + ++ + + A
Sbjct: 227 NPNQTSNVFEKYNEFEIVQVCTKKILNISEEENNYVVNFLTNKKISQKAQKFFEDMHKKA 286
Query: 313 II 314
I
Sbjct: 287 YI 288
>gi|283956683|ref|ZP_06374162.1| hypothetical protein C1336_000260133 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791932|gb|EFC30722.1| hypothetical protein C1336_000260133 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 271
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 88/298 (29%), Gaps = 36/298 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + +LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRN------QALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+ L
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANLKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGGFSPVLN 213
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K G + + + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEVKSK--DGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|157964821|ref|YP_001499645.1| hypothetical protein RMA_1057 [Rickettsia massiliae MTU5]
gi|157844597|gb|ABV85098.1| hypothetical protein RMA_1057 [Rickettsia massiliae MTU5]
Length = 303
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 31/305 (10%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A I ++N E IT + R ++ + +L
Sbjct: 12 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 71
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A++ LI E+L Q ++ + +L + + +
Sbjct: 72 DLALKSLIDESLLFQYAGDR--EIPQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 129
Query: 134 FKQYLAIQSI---WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F + + I ++ + +++ I ++ QK I+++ + +
Sbjct: 130 FISQIKSELIKMNILSILSRSVQVSNKEIDVAILSSDQKDVEISMQVFTSK--------- 180
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
N+ F Q + RL K C ++K + + + S + Q ++
Sbjct: 181 DGSNKAFTQ-----MNNLKNRLKK-CADVKKSF--YDNFATMQIITDKLSKIEGVKQTIV 232
Query: 251 -KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + +N + E +C K+ L Y+ T KI + + + +R
Sbjct: 233 KDLTPDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMR 292
Query: 310 SNAII 314
A I
Sbjct: 293 KKAAI 297
>gi|237750606|ref|ZP_04581086.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229373696|gb|EEO24087.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 294
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 109/281 (38%), Gaps = 33/281 (11%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NGE IT I + L ++ A L+ E LK+ EI++ I +
Sbjct: 40 GIALFVNGEPITLHAIKQVENALHTDRLR------ATDILVTEKLKEAEIKRLKIEINDI 93
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ Q A+ G++ + F + + ++G+ ++ L Q + ++++ E
Sbjct: 94 QLDSQIAQIAQQNGMNLDQFYAAIMREGMSLVEYRTKLKEQMLAQELMRKILFSSNVGQE 153
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E+ + Y F IP + + R K+ ES ++ D
Sbjct: 154 DELR-----------KYYNEHLDEFVIPKEVVGVKFV--SRNKEILESFMQQGID----- 195
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
S I D + L L Q ++ L + + T + + G +++A K +
Sbjct: 196 ---STIPDSIAHTEEKLEIESLPTQVADIFLATNAKSFTQVFESDNG-DFVAFYIKGKIS 251
Query: 280 GEIA----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
E K Y++ + EK ++Y +++RS + I +
Sbjct: 252 NEQVDFEKAKNYIAQKLIANNQEKILSDYFERVRSRSKIVF 292
>gi|239947019|ref|ZP_04698772.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921295|gb|EER21319.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 295
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 98/303 (32%), Gaps = 27/303 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A I ++N E IT + R ++ + +L
Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ LI E+L Q ++ + +L + + +
Sbjct: 64 DLVIKSLIDESLLFQYAGDR--EIPQEEIDNAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 FISQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSKD 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
+ + RL K C ++K S + + + S + Q ++
Sbjct: 174 GGNKAFTQ----MNNLKNRLKK-CADVKK--SLYDNFATMQIITDKLSKIEGVKQTIIKD 226
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +N + E I +C K+ L Y+ T KI + + + +R
Sbjct: 227 LTPDKASNVFEVNNKFEIILVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKK 286
Query: 312 AII 314
A I
Sbjct: 287 AAI 289
>gi|126641590|ref|YP_001084574.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ATCC
17978]
Length = 414
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 94/253 (37%), Gaps = 15/253 (5%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIAL----LKLQKINGELEK----IAVQELIVETLKK 87
+ + ++ VI D+ + +A L+ QK ++ + +LI+ +
Sbjct: 5 AQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKKEVPPQQYLQFQVLDQLILRQAQL 64
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDK-QGIGDNHFKQYLAIQSIWP 145
++++K GI D ++N ++ A +G S E F LD + + +A
Sbjct: 65 EQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQKLDAIAPGTYENLRSRIAEDLAIN 124
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ + M + + ++ + + + I + Q V K ++
Sbjct: 125 RLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHVIHMRISGDNPQEVQNVAKEVR-- 182
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
S+L D N L+K ++ V + SD+ + + Q TT+ +
Sbjct: 183 --SQLAQSNDLNALKKLSTATVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLISVR 240
Query: 265 KGVEYIAICDKRD 277
GV + + +++
Sbjct: 241 DGVHVLKLLERKQ 253
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 239 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 295
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 296 EDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 355
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 356 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 401
>gi|18311465|ref|NP_563399.1| peptidylprolyl isomerase [Clostridium perfringens str. 13]
gi|46396974|sp|Q8XHK0|PRSA_CLOPE RecName: Full=Foldase protein prsA; Flags: Precursor
gi|18146149|dbj|BAB82189.1| probable protein export protein [Clostridium perfringens str. 13]
Length = 342
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/326 (14%), Positives = 107/326 (32%), Gaps = 31/326 (9%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LL 63
S+ + ++ +V A+ T+NGE IT G++ +
Sbjct: 1 MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA 60
Query: 64 KLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYF 105
+++ G+ + VQ L+ + + E +K GI V+
Sbjct: 61 QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ 120
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
F + G ++F L+ +G ++ FK + Q I V++ + + +
Sbjct: 121 FENIKKGMG---DNFDKALEAEGYTEDTFKDVIKNQVI-NQAVQDYIIKDVKVTDEDAQK 176
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ K ++++ + +N+ QK + + + K + S+
Sbjct: 177 YYDENK----QQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSE 232
Query: 226 IHDVSIGKAQYLLESD--LHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ + L +F + LK + + P TQ G I + G ++
Sbjct: 233 NKKPIAENLGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQL 292
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL 308
S K +K ++ +
Sbjct: 293 PFDEVKSQIIQILKQQKDSEKFKADM 318
>gi|322508232|gb|ADX03686.1| Peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
1656-2]
Length = 414
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 94/253 (37%), Gaps = 15/253 (5%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIAL----LKLQKINGELEK----IAVQELIVETLKK 87
+ + ++ VI D+ + +A L+ QK ++ + +LI+ +
Sbjct: 5 AQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKKEVPPQQYLQFQVLDQLILRQAQL 64
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDK-QGIGDNHFKQYLAIQSIWP 145
++++K GI D ++N ++ A +G S E F LD + + +A
Sbjct: 65 EQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQKLDAIAPGTYENLRSRIAEDLAIN 124
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ + M + + ++ + + + I + Q V K ++
Sbjct: 125 RLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHVIHMRISGDNPQEVQNVAKEVR-- 182
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
S+L D N L+K ++ V + SD+ + + Q TT+ +
Sbjct: 183 --SQLAQSNDLNALKKLSTATVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLISVR 240
Query: 265 KGVEYIAICDKRD 277
GV + + +++
Sbjct: 241 DGVHVLKLLERKQ 253
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 239 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 295
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 296 EDFAILAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 355
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 356 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 401
>gi|253701712|ref|YP_003022901.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
gi|251776562|gb|ACT19143.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
Length = 323
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 97/293 (33%), Gaps = 17/293 (5%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGEL---------EKIAVQELIVETLKKQE 89
S + +NG IT G++ + + L Q + + A+ +LI + Q
Sbjct: 30 SQDVPALVNGAPITRGEVDRAVKALLSQNRMAQPIAPEVMKKATEAALDQLISAEVLYQA 89
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ G+ V Q + +++ LD + + + + + ++++
Sbjct: 90 ASEMGVADLDRQVRDRVAQSRSRYR-TGDEYEKALDSVEMSEKEVELAVRKDIVINNLIR 148
Query: 150 NDFMLKYGNLEMEIPANKQKMKNIT---VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
F+ K E EI ++ + + + +L +P+ + A
Sbjct: 149 TQFLPKATVSEAEIEEFYRENREKSFRLGERVRVSQILVPVPEQATPAARKQAREKALAL 208
Query: 207 ESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
R+R +D + S + + G L + P F+ + T
Sbjct: 209 LQRVRKGEDFAAVASLESAPPTNKNGGDMGGLNRGEAVPSFEKAAFGLKVGEVSEVVETP 268
Query: 265 KGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G + + K + + +K+ K AEY +LR++ I
Sbjct: 269 VGFHIVKLSQKLPPATATLDEARGQIVRYLQQSKVRKSVAEYAAQLRASGHIE 321
>gi|320103011|ref|YP_004178602.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida
ATCC 43644]
gi|319750293|gb|ADV62053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida
ATCC 43644]
Length = 370
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 86/286 (30%), Gaps = 18/286 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITF 97
+ +N IT D+ + +A ++L + +AV+ L+ L Q + + GIT
Sbjct: 61 DQPLAVVNATPITRRDVQRIMAQIELAPGAEIQDAYNMAVEMLVNTELLFQFLNRQGITV 120
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
++ + + + L G ++ L +W V +
Sbjct: 121 TKKDLDDELARLSESLKAQNLTLEQALAANGATMQELQKDLTRAKLWEKYVT-RVATEER 179
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-----KLQNQGFVQKRIKDAEESRLRL 212
+ + R +L +P+ K + + + E ++
Sbjct: 180 LKKYVADNQD----LFNGVKVTARHILLKVPEGASEEVKASIKAKLLAIKAEIESGKIEF 235
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
+ +K + S G L +F K ++P T+ G I
Sbjct: 236 AEAADKYSEDDGNKQQPSGGFLGEFYRRGQLIEEFAEAAFKCKPGVISDPVETEFGYHLI 295
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLRSNAIIH 315
+ ++ + + E + E + ++ A I
Sbjct: 296 LVTNRDEGQ---PFDFEKGRDIAFQQFESELREEVILAEKAKAKIE 338
>gi|87306930|ref|ZP_01089076.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Blastopirellula
marina DSM 3645]
gi|87290303|gb|EAQ82191.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Blastopirellula
marina DSM 3645]
Length = 369
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/293 (16%), Positives = 96/293 (32%), Gaps = 32/293 (10%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGEL------EKIAVQELIVETLKKQEIEKSG 94
I +N I D D+ + A G+L + + LI L Q IE +
Sbjct: 57 EIEAFVNNAPIYDVDVERAAAKAFGAASKGDLDLPFGLKSSVLNRLIDRELALQYIESTD 116
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
S+ VN + + + ++L + ++ +A WP L
Sbjct: 117 FRPSSSEVNREISRVKKELEARGKSLDAYLTENHTDMRMLRRRIAWNIAWPRYADA--SL 174
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
NL +++ + + + +L + N+ + V+++ A R+++ +
Sbjct: 175 TDDNLRRYFELHRR---DFDGTQRKLSQILLTT--NETEPSQVVERQRDIAARLRVQIKR 229
Query: 215 DCNKLEKFASKIHDV----SIGKAQYL-LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
EK A + G ++ + L + N P T G+
Sbjct: 230 GEFAFEKAARSYSNAPSSEQGGLVGWIGRHNQLPEEIHNAAFDAPLGEVAGPIQTSFGIH 289
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV-----KKLRSNAIIHY 316
IC + GEI + ++ + Y+ + RS A + Y
Sbjct: 290 L--ICVTEEQLGEIPW------EEVKHEVREAAERYLFSYTADRGRSQADVKY 334
>gi|57239486|ref|YP_180622.1| hypothetical protein Erum7600 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579465|ref|YP_197677.1| hypothetical protein ERWE_CDS_08010 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161565|emb|CAH58493.1| putative membrane protein [Ehrlichia ruminantium str. Welgevonden]
gi|58418091|emb|CAI27295.1| Hypothetical protein ERWE_CDS_08010 [Ehrlichia ruminantium str.
Welgevonden]
Length = 425
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/309 (17%), Positives = 114/309 (36%), Gaps = 30/309 (9%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-KINGELEKIA-VQEL 80
+F ++ + + ++ +NGE+I+ D+ + IA+ K ++ ++ K + L
Sbjct: 32 GLFLLIFAFYCSNAFANVKMVAMVNGELISSLDLERYIAISKFFYHVDSDVAKDIELDSL 91
Query: 81 IVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAE-DFSSFLDKQGIGDNHFK 135
I E + KQE EK + VN FV N + DF S+ ++QG+ +
Sbjct: 92 IDEYIWKQEAEKLKVVVSEQEILDAVNQLFVMKGSNHKENHNNDFKSYTEQQGLDYDMLI 151
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
Q++ + +W ++ + EI ++ M + + +P N
Sbjct: 152 QHVKSKLLWNKILMLKVVPYISVSNKEILDSQDTMLSPNGLNIFVHIQEIVLPVGLSDNN 211
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI----HDVSIGKAQYLLESDLHPQFQNLLK 251
R L + ++K + +++ +L + L L
Sbjct: 212 VTDVIRS-------LHDGISIDNIKKRVEGLLFEETSINLKDVDIVLANQL-------LN 257
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK---L 308
N+ P T+ G I + ++ ++ E A + Q E +YV + L
Sbjct: 258 AKVNDVIGPIKTEYGNLIIKLLNRFEINREFANSSVNLQQMYLDVQE--SKKYVDQISLL 315
Query: 309 RSNAIIHYY 317
++ A +
Sbjct: 316 KTKAKCENF 324
>gi|322421262|ref|YP_004200485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
gi|320127649|gb|ADW15209.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
Length = 342
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 100/285 (35%), Gaps = 16/285 (5%)
Query: 46 INGEVITDGDISKRIALLKLQKINGEL---------EKIAVQELIVETLKKQEIEKSGIT 96
+NG+VIT ++ + + L QK + +K A+++L+ L Q +K+ I
Sbjct: 51 VNGKVITRAEVDRAVKALLDQKQLRQPVALEELRAVKKEAMEQLVSSELLYQAAQKTDIG 110
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V + S E F+ + + G+ +Q + + D ++ F +
Sbjct: 111 DVEQKVAQVIARDRARYP-SDEAFARSVKEAGLTLPMLQQLIRKEMAVSDFIETMFGARI 169
Query: 157 GNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E + + + T +L +P + + R++ +
Sbjct: 170 NVGEDEARSFYEANRDRFKTGSSVRASQILVMVPGPSQDRDRERARERAEILLHRVKEGE 229
Query: 215 DCNKLEKFASK-IHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
+ L + S G + + L P Q + ++ T G + +
Sbjct: 230 NFGILAQSHSDCPSKARGGDLGFFNKGKLDPGLEQAVFALKPGEISDIVQTSFGFHILKL 289
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+KR E + + + K+ + AEYV KLR A +
Sbjct: 290 TEKRGPRLETYEEARPEIYSYLKREKMLRLVAEYVAKLRGKAKVE 334
>gi|228472041|ref|ZP_04056809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
gingivalis ATCC 33624]
gi|228276653|gb|EEK15366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
gingivalis ATCC 33624]
Length = 451
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/313 (10%), Positives = 94/313 (30%), Gaps = 20/313 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--ING 70
I +L F+ + + + + + +I + DI + + LK Q
Sbjct: 4 ISILCQLFLFSLLSTSALWAQSPKNKIDGVAAVVGDYLILETDIDRALVELKSQNVDTKN 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD----K 126
+ +L+ + L + + I N + + E
Sbjct: 64 VTRCQLLGKLMEDKLYVSQAIQDSIKISDNDIRDGVNR---RIDFLVEQLGDIKKVVDFY 120
Query: 127 QGIGDNHFKQY---LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVREYL 179
+ + + Q+ +K + E+ K+ E
Sbjct: 121 HKDDEQSLRDELFEILRQNELSSRMKAKIVENIEVTPEEVKQFFNKIPKDELPTIGTELE 180
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
I ++ + + +++ +K+ ++ L + S + + +
Sbjct: 181 IAQIVIEPKAPQSEIDKVIEQ-LKEIKKDVLENGTSFSTKAILYSADRATGGKELTFNRK 239
Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
S +F+++ + ++P+ T G + + R G E++++ L P
Sbjct: 240 SSFAKEFKDVAFSLQEGEISDPFKTDFGWHILQVVKIR--GKEVSVRHILMVPQIPQNSL 297
Query: 299 KHEAEYVKKLRSN 311
+ + + +R
Sbjct: 298 EEAKKKINDIRDK 310
>gi|116626458|ref|YP_828614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|116229620|gb|ABJ88329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
Length = 418
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/306 (15%), Positives = 110/306 (35%), Gaps = 22/306 (7%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISK----------RIALL--KLQKINGELEKIAVQ 78
+ + + I +NG++IT G++ K R L +LQ E +
Sbjct: 18 AADNNVKVVEEIAAKVNGDIITRGELEKKRQEIEAEAKRQGLTGARLQDAVKEAHADVLS 77
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFL-DKQGIGDNHFKQ 136
+ I L Q+ + I+ V + +S + F F+ ++ G+ FKQ
Sbjct: 78 KEIDTLLLVQKGKDLNISV-DADVTRRLAEIQVQQKISDPDKFQQFIREQTGMTFEDFKQ 136
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN---ITVREYLIRTVLFSIPDNKLQ 193
+ + + V+ + M E E+ + K+ + + ++ S +
Sbjct: 137 QMKNEMLTQRVIGQEVMRNITVPEAELQKYYDEHKSEFMRKEAQVFLSQIVISTEGKSPE 196
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLL-K 251
+K+ KD + K + + + + G + + + + ++ K
Sbjct: 197 QVAAAEKKAKDLVARANKGEKFSDLARDNSDDVETAKNGGYVGSMPKGMMDKAIEEIVFK 256
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ ++P+ +G + + D+ + G +K L + T K Y+ +LR
Sbjct: 257 AKKGFVSDPFKRAQGFVILKVEDRFEAGQASFDEVKNELQDRLTQPKANAKVRTYLTQLR 316
Query: 310 SNAIIH 315
+A +
Sbjct: 317 EDAFLE 322
>gi|57238339|ref|YP_179467.1| hypothetical protein CJE1481 [Campylobacter jejuni RM1221]
gi|57167143|gb|AAW35922.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
gi|315058774|gb|ADT73103.1| Possible periplasmic protein [Campylobacter jejuni subsp. jejuni
S3]
Length = 271
Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 87/298 (29%), Gaps = 36/298 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + +LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGGFSPVLN 213
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K G + + + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEV--KSRDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|296135908|ref|YP_003643150.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia
K12]
gi|295796030|gb|ADG30820.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia
K12]
Length = 262
Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 103/306 (33%), Gaps = 52/306 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRIALLKLQKINGE 71
+L +L + + + WA + T+NG+ I ++ +A + Q + +
Sbjct: 1 MLKLSRILAVAALSCAFAAPVWAQN---IATVNGKPIPQSLADSVANSMAKQQGQAVTPQ 57
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+++ ELI + QE +K G+ ++ + + AR L F+++L K I
Sbjct: 58 LKEMVKNELISREVMVQEADKLGLDKETAVQDEI--RIARQNILIRALFNAYLQKHPIT- 114
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ + + + +K+ EY + +L +P K
Sbjct: 115 ---EAQIKAEY------------------------DKFVKSFGSTEYKAQHIL--VPSEK 145
Query: 192 LQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
Q K+ E + KD + G + ++ P F L
Sbjct: 146 EAQDIIAQLKKGAKFSELAKKYSKDTGSA---------ANGGDLGWSTPNNYVPPFAKAL 196
Query: 251 KK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ T P +Q G I + R + Q + E +Y +L
Sbjct: 197 EALKPGQYTQTPVQSQFGWHVIKLDATRPAKAPTLDQLKPQIQAELQRQEVT--KYQDEL 254
Query: 309 RSNAII 314
R+ A I
Sbjct: 255 RAKAKI 260
>gi|157362935|ref|YP_001469702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga lettingae
TMO]
gi|157313539|gb|ABV32638.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotoga lettingae
TMO]
Length = 343
Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/326 (14%), Positives = 112/326 (34%), Gaps = 41/326 (12%)
Query: 16 LTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-- 72
+ F+ + I+ +V+ + ++ + +NG IT ++++ + +L +
Sbjct: 1 MRKVFMFGLILILSLVAIGQETQPATAVVAEVNGVAITMEELNREANVDRLLSQIQSVDA 60
Query: 73 -------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV----QH 109
++ + LI + L KQ EK G+T + + +
Sbjct: 61 TFYDVLVNTSEGVNLLLRYKREVLNNLIDQVLIKQIGEKMGVTVSKDNIENMVSTELNKT 120
Query: 110 ARNTGLSAEDFSSFLDKQGIG-DNHFKQYLA-----IQSIWPDVVKNDFMLKYGNLEMEI 163
G++ D +L + G+G N FK L Q++ +++ E E
Sbjct: 121 LTQYGMTESDLDWYLKQAGLGDINSFKDRLRWIFTVQQTV--SLIQQQVTSSATVTEEEA 178
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
++ + E + + ++ D+K + +++ E S++ + L K
Sbjct: 179 RQFYEQNREYFAVEEAAKLLRITV-DSKEKADKALERIRAGEEFSQVASDVSTDPLSKGK 237
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ + L+ ++ + + P T G E I DKR G E
Sbjct: 238 AGDLGWVERGSG-LISEEIEE---KIFVSPKGAILGPLQTSVGWEIYRIIDKRPKGYENF 293
Query: 284 LKAY--LSAQNTPTKIEKHEAEYVKK 307
+ K ++ ++ +
Sbjct: 294 EDVVNDIYQHLIQQKAQQLWQTWINE 319
>gi|169830779|ref|YP_001716761.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Desulforudis audaxviator MP104C]
gi|169637623|gb|ACA59129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Desulforudis audaxviator MP104C]
Length = 297
Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 94/285 (32%), Gaps = 35/285 (12%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NGE I+ ++ + ++ + +QELI L QE G+
Sbjct: 38 ETVAVVNGEPISRDELYAEMY--------AQMGQQTLQELITRKLIIQEGRAQGVEISDA 89
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V + + S E+F L G+ +Q + +Q I V+ L ++
Sbjct: 90 DVQTRLDEVIESGFSSREEFQEALKAYGLEQKDLEQQIRVQLIVEGVLGKQIQLDEAEVK 149
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL- 219
AN+++ E R ++ ++AE R L +
Sbjct: 150 EYFEANRKRFGQPESLE--ARHIVLKT--------------REEAESVRSELVSGADFAV 193
Query: 220 ---EKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
EK + G + +L P +Q L T G + I +K
Sbjct: 194 LAREKSVDPLTAGGGGGLGTIRYGELIPAWQKALFGMETGLVNEVLETPSGFHVVEILEK 253
Query: 276 ----RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ ++ +A + + T +I + +V L + A + Y
Sbjct: 254 HPAVEPVFADV--EAKVRRELTEKEITQLYPAWVDSLWTKAKVEY 296
>gi|94967188|ref|YP_589236.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Koribacter versatilis Ellin345]
gi|94549238|gb|ABF39162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Koribacter versatilis Ellin345]
Length = 317
Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/307 (17%), Positives = 104/307 (33%), Gaps = 36/307 (11%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIA-------VQELIVETLKKQEIEKSGIT 96
+NG IT ++ K ++ A ++ELI + Q EK G+
Sbjct: 2 ARVNGHKITRPEVEKYYKNQIAGSPQQPSDEQADNLRLNILRELINNEILMQRAEKLGLL 61
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V+ A S E F + L ++GI + F++ L V+ + K
Sbjct: 62 ATDEEVDSKVN--AAKAPYSQEQFDARLKERGITMDDFRRDLRRSITIDKVINKEITSKI 119
Query: 157 GNLEMEIPANKQKMK---NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ +I + K N+ +Y + +L + N +A++ +L
Sbjct: 120 NVSDGDISSYYNAHKAEFNLIEPQYHMAQILVTPQPNPQVKNLQKANNDAEAKKKIQQLV 179
Query: 214 KDCNKLEKFASKIHDVS--------IGKAQYLLESDLHPQ---FQNLLKKSQNNTTN--P 260
+ E FAS + S G ++ ES L F + + T P
Sbjct: 180 NRLDSGEDFASVAMNYSEQPEISPNGGDLGFIPESSLKGDKLAFDAVARLKPGQYTGVLP 239
Query: 261 YVTQK-----GVEYIAI-----CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
V G + + +R+L +A + Q + + +A Y + +R
Sbjct: 240 IVDPSNKQVLGYRILKLIAKESSGQRELNDPRVQQA-IREQLRDGREQLLKAAYYESVRD 298
Query: 311 NAIIHYY 317
+ + Y
Sbjct: 299 KSSVENY 305
>gi|91200802|emb|CAJ73856.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 424
Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 98/288 (34%), Gaps = 23/288 (7%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITF 97
+I ++N E I D+ K + + Q G LEK ++L+ + + +Q + + G+
Sbjct: 143 KIIASVNEEKILRKDLDKILDRFRKQVPPGAIPSLEKQITEQLVTQAILRQFVREKGLDV 202
Query: 98 DS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
N +N A+N + FL+ QG + + + + V N
Sbjct: 203 ADDVVNNEINKMRENIAKNPAAEGKTLEQFLEIQGSNIDELSTAIRMSAALDAYVTN--- 259
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ +E K T E +L K Q + ++ + L
Sbjct: 260 -NVDDKTLENYFIKNI-NEFTGEEVTASHILIGTKGMKEQEDLDKARAKIESIKKELDNG 317
Query: 214 KDCNK-LEKFASKIHDVSIGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+ + +K++ + G+ + F N ++ + P T+ G I
Sbjct: 318 ANFAELAKKYSECPTGKTGGELGSFPRHGVMVETFANAAFSTEVGKVSEPVKTEFGYHLI 377
Query: 271 AICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +D+ + + ++ + + LR NA +
Sbjct: 378 YVTNHAPAKDVSFDAVKDTV-REKLVAIEM----GDLINDLRDNAQVE 420
>gi|148653552|ref|YP_001280645.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp.
PRwf-1]
gi|148572636|gb|ABQ94695.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp.
PRwf-1]
Length = 460
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 102/300 (34%), Gaps = 29/300 (9%)
Query: 43 RTTINGEVITDGDISKRIAL----LKLQKINGELEKI----AVQELIVETLKKQEIEKSG 94
+N I + +A ++ + + LI+ L+ ++++G
Sbjct: 54 IALVNDTPILKSQLVSAMATAQARIQASGQPAPSAQRLQNDVLNSLILRQLQLDMVKRAG 113
Query: 95 ITFDSNTVNYFFVQHARNTGLS-AEDFSSFLD-KQGIGDNHFKQYLAIQSIWPDVVKNDF 152
I D++ VN + A++ GL+ LD KQ + + + + ++
Sbjct: 114 IRPDADVVNQSLARFAQSQGLTSLSQLQQTLDAKQPGSYASLRAQVIEEESLKALQQSQV 173
Query: 153 MLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ E +I A + + + EY + D+ + ++ +
Sbjct: 174 ANRVRITEQDIDAFLASPEAQRLQSAEYRTIHIRIPFSDDYNRITESEKQTALQIAQQAK 233
Query: 211 RLPKDCNKLEKFASKIHD---------VSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNP 260
L + + + ++ V G Y S L + + T P
Sbjct: 234 NLLMNTDDAQSVLDELSAGIAKNYVAPVQGGDMGYHEASGLPTDIAKQITPLNVGQVTEP 293
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLS-------AQNTPTKIEKHEAEYVKKLRSNAI 313
+T +G++ + + DKR+ I + + QN+ E+ + ++LR +A
Sbjct: 294 QITPEGIDVVKLVDKRNNDNMIIPQWKVRHILIKTDEQNSDALAEQKINDLYEQLRHDAD 353
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+++ +K+ N+ + ++ +R +L + + +++I D E +LR D +
Sbjct: 299 GIDVVKLVDKRNNDNMIIPQWKVRHILIKTDEQN--SDALAEQKINDLYE-QLRHDADFS 355
Query: 218 KLEKFASKIHDVSIG--KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
L S + ++ E + P+F+ ++K++ + + P+ +Q G + + D
Sbjct: 356 ALASTYSNDPGSAGRGGDLDWVAEGQMVPEFEEMMKRTPKGDYSIPFKSQFGWHILKVED 415
Query: 275 KRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
R+ + + + + +++++LR+NA I +
Sbjct: 416 TREKDVSDTVKRNLAREALYQRLAPQAQEDWLQELRANAYIQIF 459
>gi|255322964|ref|ZP_05364100.1| ferric receptor CfrA [Campylobacter showae RM3277]
gi|255299826|gb|EET79107.1| ferric receptor CfrA [Campylobacter showae RM3277]
Length = 278
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/296 (17%), Positives = 102/296 (34%), Gaps = 36/296 (12%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ + +S+ I I E IT ++ K A L+ + N A+ LI + L+
Sbjct: 11 FLSFCMANASQISNGIAVIIENEPITVNEVRKAAAQLQTSEAN------ALNLLIRDRLE 64
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+I+ I +N + A +G+SA D S + +G FK +A
Sbjct: 65 TAQIKNLKIEASDYELNQRLQKIASESGMSASDLRSAVLSKGGDYAQFKDDVAKTIKQEK 124
Query: 147 VVKNDFM-LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ ++ F K E A ++ +++ + + P ++
Sbjct: 125 LYQSIFAEAKINISENAARAYFEQNRDLFAHFTDVSVTRYVAPS------------MQLL 172
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
E +R P + N L + PQ + + +++ T + T
Sbjct: 173 EAARHSSPMNTNHSVHM----------DVLDLKSEQIPPQLRTIFQQTADGTFTQIFQTP 222
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHY 316
+G E + K+ G + + + + + Y KLR+ A + Y
Sbjct: 223 QGFEMFYVASKK--GQTMPEFDEVRDEAMNALYKLEQDRVIGEYFNKLRAKANVKY 276
>gi|157826081|ref|YP_001493801.1| hypothetical protein A1C_05205 [Rickettsia akari str. Hartford]
gi|157800039|gb|ABV75293.1| hypothetical protein A1C_05205 [Rickettsia akari str. Hartford]
Length = 296
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 99/307 (32%), Gaps = 34/307 (11%)
Query: 22 LIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72
LI+ I ++ + A I ++N E IT + R ++ + +L
Sbjct: 4 LILIIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVDGLTPSQDKQL 63
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+A++ LI E+L Q ++ + +L+ + + N
Sbjct: 64 SDLAIKSLIDESLLFQYAGDR--EIPQEEIDNAIKSIEDRNKMPQGSLLQYLESRSVNPN 121
Query: 133 HFKQYLAIQSI---WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F + + I + + ++ I ++ QK I+++ + +
Sbjct: 122 SFIAQIKSELIKMNILSSLSRSVQVSNKEIDAAILSSDQKDVEISMQVFTSQD----SSK 177
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--DVSIGKAQYLLESDLHPQFQ 247
++ R+K + + L + +E K+ + L SD
Sbjct: 178 KAFTQMHHLKNRLKKCSDVKKSLYDNFATMEIITDKLSKIEGVKQTIVKDLSSD------ 231
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+N + E I +C K+ L Y+ T KI + + +
Sbjct: 232 --------KASNVFEVNNKFEIILVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFEN 283
Query: 308 LRSNAII 314
+R A I
Sbjct: 284 MRKKAAI 290
>gi|294340130|emb|CAZ88501.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas
sp. 3As]
Length = 262
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 103/306 (33%), Gaps = 52/306 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRIALLKLQKINGE 71
+L +L + + + WA + T+NG+ I ++ +A + Q + +
Sbjct: 1 MLKLSRILAVAALSCAFAAPVWAQN---IATVNGKPIPQSLADSVANSMAKQQGQAVTPQ 57
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+++ ELI + QE +K G+ ++ + + AR L F+++L K I D
Sbjct: 58 LKEMVKNELISREVMVQEADKLGLDKETAVQDEI--RIARQNILIRALFNAYLQKHPITD 115
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ + + +K+ EY + +L +P K
Sbjct: 116 ----AQIKAEY------------------------DKFVKSFGSTEYKAQHIL--VPSEK 145
Query: 192 LQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
Q K+ E + KD + G + ++ P F L
Sbjct: 146 EAQDIIAQLKKGAKFSELAKKYSKDTGSA---------ANGGDLGWSTPNNYVPPFAKAL 196
Query: 251 KK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ T P +Q G I + R + Q + E +Y +L
Sbjct: 197 EALKPGQYTQTPVQSQFGWHVIKLDATRPAKAPTLDQLKPQIQAELQRQEVT--KYQDEL 254
Query: 309 RSNAII 314
R+ A I
Sbjct: 255 RAKAKI 260
>gi|71066075|ref|YP_264802.1| peptidylprolyl isomerase [Psychrobacter arcticus 273-4]
gi|71039060|gb|AAZ19368.1| possible peptidylprolyl isomerase [Psychrobacter arcticus 273-4]
Length = 465
Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/327 (14%), Positives = 113/327 (34%), Gaps = 23/327 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
MT+ + + + + + + I +N I D+ I
Sbjct: 20 MTALGMSVSTQAATVNSAKGQATTTQKNSVARLTPANSTDGIIALVNENAILKSDLIAAI 79
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
A + + + +L+ + LI+ L+ I++ G+ D +N Q A+
Sbjct: 80 AQTQARAKAAGEPIANSAQLQSEVLNALILRELQLSLIKRVGLNPDEAAINKRLEQIAKA 139
Query: 113 TGL-SAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NK 167
GL S LD + G + L + + + + E +I A
Sbjct: 140 EGLNSIAALQQRLDSAQAG-SYATLRAQLIEDAAIQALQQRQITNRVRISEQDIDAFLAS 198
Query: 168 QKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESRLR-----LPKDCNKLEK 221
+ K + EY V + + D ++ +K A++ R R +
Sbjct: 199 PEAKRLNQSEYQTVHVRVPYMDDYSRLSEAQRNDALKVAQKLRTRLLVPNIDVAEAIAAS 258
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
S + G + + L + + + K + + P +T +G++ I + +K+
Sbjct: 259 QGSYPIPLQGGDMGFHKAAALPTELSSEITKLEVGAVSAPLITPEGIDIIKLANKK--SS 316
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ L + ++ K+++ + + + +
Sbjct: 317 DTMLVPQWNTRHILVKVDELQTDALAE 343
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 66/155 (42%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
ANK+ + V ++ R +L + ++LQ +++I D S+LR + L S
Sbjct: 311 ANKKSSDTMLVPQWNTRHILVKV--DELQTDALAEQKINDL-YSQLRNGAAFDGLASTYS 367
Query: 225 KIHDVSIG--KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ ++ E + F+ ++K + + + P+ TQ G + I KR
Sbjct: 368 DDPGSAGRGGDLDWVGEDQMIGPFEAMMKNTAVGDYSAPFKTQFGWHILKIEGKRQQDVS 427
Query: 282 IALKAYLSAQNTPTKIEKHEA-EYVKKLRSNAIIH 315
+ ++ Q ++ +++++LR+ A I
Sbjct: 428 DEYRRTMARQALYQRLAPQAKEDWLQELRAGAYIQ 462
>gi|229587026|ref|YP_002845527.1| hypothetical protein RAF_ORF0929 [Rickettsia africae ESF-5]
gi|228022076|gb|ACP53784.1| Unknown [Rickettsia africae ESF-5]
Length = 295
Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 98/303 (32%), Gaps = 27/303 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A I ++N E IT + R ++ + +L
Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A++ LI E+L Q + + +L + + +
Sbjct: 64 DLALKSLIDESLLFQYAGDR--EIPQEEIENAIKSIEDRNKMPHGALLQYLKSRSVNPDS 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 FISQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSKD 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
+ + RL K C ++K S + + + S + Q ++
Sbjct: 174 GGNKAFTQ----MNNLKNRLKK-CADVKK--SLYDNFATMQIITDKLSKIEGVKQTIVKD 226
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +N + E +C K+ L Y+ T KI + + + +R
Sbjct: 227 LTPDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKK 286
Query: 312 AII 314
A+I
Sbjct: 287 AVI 289
>gi|121612944|ref|YP_001000964.1| hypothetical protein CJJ81176_1306 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005873|ref|ZP_02271631.1| hypothetical protein Cjejjejuni_06850 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|87249622|gb|EAQ72581.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 271
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 85/296 (28%), Gaps = 32/296 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNRSYEQFRTNFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGGFSPVLN 213
Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K +K + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|86153052|ref|ZP_01071257.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88596815|ref|ZP_01100052.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|157415552|ref|YP_001482808.1| hypothetical protein C8J_1232 [Campylobacter jejuni subsp. jejuni
81116]
gi|85843937|gb|EAQ61147.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88191656|gb|EAQ95628.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|157386516|gb|ABV52831.1| hypothetical protein C8J_1232 [Campylobacter jejuni subsp. jejuni
81116]
gi|284926513|gb|ADC28865.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307748192|gb|ADN91462.1| probable periplasmic protein [Campylobacter jejuni subsp. jejuni
M1]
gi|315932440|gb|EFV11383.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
327]
Length = 271
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 85/296 (28%), Gaps = 32/296 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGGFSPVLN 213
Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K +K + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|154149306|ref|YP_001405723.1| putative periplasmic protein [Campylobacter hominis ATCC BAA-381]
gi|153805315|gb|ABS52322.1| putative periplasmic protein [Campylobacter hominis ATCC BAA-381]
Length = 275
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 100/295 (33%), Gaps = 33/295 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ ++ + + + + + E IT +++ K+ K G A++ LI
Sbjct: 6 VFLSLIFGFCLANADVINGVVAVVENEPITHYELN------KMIKTRGLNPNDALEVLIK 59
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L+ EI++ GI N A +S + + + KQG + FK+ +
Sbjct: 60 NKLQVAEIKRLGIITSDYETNERIKAIAAQNKISVDTMQASIKKQGGTWSEFKENVRNSL 119
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ F ++ E Y ++ I N
Sbjct: 120 QEEKLYAAIFKEVAKSVTPENVEKFYNENPSLFTTYDSVNLIRYISKNANALSAI----- 174
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
+ K+ + ++K + + + + ++ + S++ P +
Sbjct: 175 --------KAGKNADGVQKISGVLKNSQMNESLRYVVSNVGPD----------GFSPIIP 216
Query: 263 TQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T+ G E + K + E A + + A + + E + +KLRSNAII
Sbjct: 217 TKLGYEMFKVNSKNGVNKISFEEAQQKAIEAYTISERKKAIEN-FNQKLRSNAII 270
>gi|15616760|ref|NP_239972.1| survival protein SurA precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11387168|sp|P57240|SURA_BUCAI RecName: Full=Chaperone surA homolog; Flags: Precursor
gi|25403557|pir||B84946 peptidylprolyl isomerase (EC 5.2.1.8) surA [imported] - Buchnera
sp. (strain APS)
gi|10038823|dbj|BAB12858.1| survival protein surA precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 430
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 15/267 (5%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEI 90
I +N E+I + D+++ + LK K L++ +++LIV++L QE
Sbjct: 24 QVDNITAIVNDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSLILQEA 83
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQSIWPD 146
I ++ A +S + F + + I ++F + + I
Sbjct: 84 NSKNINITKEQIDTVIKNIALKKHISVDHFKKQILLRNIKNPSYYDNFIKKIEILLKMKT 143
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + E E+ +K+ + I +P K + V+ R K AE
Sbjct: 144 IQDYELHKRINISEQEVNTIFKKLIKDNEKFKKINLSYILLPSLKQDSDNAVRNRTKIAE 203
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262
+L K + + + S + K + D+ F L + P V
Sbjct: 204 NIVYKLKKGYDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQILGPIV 263
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLS 289
KG+ + + D I + Y+
Sbjct: 264 GDKGLYILKVNDIHHKKENIVTEFYMQ 290
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K V E+ ++ L P L N +K E + + + ++ + + +
Sbjct: 280 KENIVTEFYMQHCLIK-PSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNLSDDYYSSN 338
Query: 231 I-GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G ++ + L + L +N + P + G I D+R + LK
Sbjct: 339 KKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDAFYKLKKNQ 398
Query: 289 SAQNT-PTKIEKHEAEYVKKLRSNAIIH 315
+ KI + +++ L++ A I
Sbjct: 399 AFNIVLNQKIISEKNHWIEDLKNTAYIE 426
>gi|86149973|ref|ZP_01068201.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|148926278|ref|ZP_01809963.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205356305|ref|ZP_03223071.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|85839419|gb|EAQ56680.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|145845449|gb|EDK22542.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205345910|gb|EDZ32547.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 271
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 36/298 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGGFSPVLN 213
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K G + + + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEV--KSRDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|86150833|ref|ZP_01069049.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124743|ref|YP_004066747.1| hypothetical protein ICDCCJ07001_1237 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85842003|gb|EAQ59249.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018465|gb|ADT66558.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 271
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 36/298 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGGFSPVLN 213
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K G + + + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEVKSK--DGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|168183618|ref|ZP_02618282.1| foldase protein PrsA [Clostridium botulinum Bf]
gi|237796999|ref|YP_002864551.1| peptidylprolyl isomerase [Clostridium botulinum Ba4 str. 657]
gi|259534738|sp|C3KW94|PRSA_CLOB6 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|182673144|gb|EDT85105.1| foldase protein PrsA [Clostridium botulinum Bf]
gi|229260856|gb|ACQ51889.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
Ba4 str. 657]
Length = 336
Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/344 (14%), Positives = 109/344 (31%), Gaps = 45/344 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
S + +L ++ F +V A + +NGE I D+ + ++
Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDENPRFKQV 60
Query: 66 ------------------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
+++ E + + ELI E + Q+ ++ + + +
Sbjct: 61 VSQMKMQYGEEFEKSEQGKEVIKEQKSQILDELITEKILLQKGKELKVIPKDEELNKEAD 120
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + F L G K+YL Q + V+ E
Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVIN------------EA 168
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEK 221
+ + + Y +F+ N + + K +A++ + RL +D K+ K
Sbjct: 169 TKDVKVEDKDAQKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAK 228
Query: 222 FAS-----KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S K +G Y + + + + +NP TQ G I I K+
Sbjct: 229 EVSQDTGSKDKGGLLGDINYNDANFDPTFMKAAMALKEGAISNPVHTQFGYHIIKINSKK 288
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + E + + +++ + + I Y
Sbjct: 289 EYPVKKFDAVKEDIKKQLKQEKQQEAYTKK-IEEWKKASKIKTY 331
>gi|148381478|ref|YP_001256019.1| foldase protein PrsA [Clostridium botulinum A str. ATCC 3502]
gi|153933333|ref|YP_001385853.1| peptidylprolyl isomerase [Clostridium botulinum A str. ATCC 19397]
gi|153935960|ref|YP_001389260.1| peptidylprolyl isomerase [Clostridium botulinum A str. Hall]
gi|226712001|sp|A7FPK5|PRSA_CLOB1 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|226712002|sp|A5I7R3|PRSA_CLOBH RecName: Full=Foldase protein prsA; Flags: Precursor
gi|148290962|emb|CAL85098.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
A str. ATCC 3502]
gi|152929377|gb|ABS34877.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
A str. ATCC 19397]
gi|152931874|gb|ABS37373.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
A str. Hall]
Length = 336
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/344 (14%), Positives = 110/344 (31%), Gaps = 45/344 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
S + +L ++ F +V A + +NGE I D+ + ++ ++
Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60
Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
E +K ++ LI E + Q+ ++ + + +
Sbjct: 61 LSQIKTQYGEEFEKSEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + F L G K+YL Q + V+ E+
Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLRDQIVIEKVIN------------EV 168
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEK 221
+ + + Y +F+ N + + K +A++ + RL +D K+ K
Sbjct: 169 TKDVKVEDKDAQKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAK 228
Query: 222 FAS-----KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S K +G Y + + + + +NP TQ G I + K+
Sbjct: 229 EVSQDPGSKDKGGLLGDISYSDSNYDPTFMKAAIALKEGTISNPVHTQWGYHIIKVNSKK 288
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + E + + +++ + + I Y
Sbjct: 289 EYPVKKFDSVKEDIKKQLKQEKQQEAYTKK-IEEWKKASKIKTY 331
>gi|170763930|ref|ZP_02635346.2| putative foldase protein PrsA [Clostridium perfringens B str. ATCC
3626]
gi|170764086|ref|ZP_02631748.2| putative foldase protein PrsA [Clostridium perfringens E str.
JGS1987]
gi|170662690|gb|EDT15373.1| putative foldase protein PrsA [Clostridium perfringens E str.
JGS1987]
gi|170712067|gb|EDT24249.1| putative foldase protein PrsA [Clostridium perfringens B str. ATCC
3626]
Length = 326
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 102/304 (33%), Gaps = 31/304 (10%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE-------------- 71
+V A+ T+NGE IT G++ + +++ G+
Sbjct: 7 CNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQILQ 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ VQ L+ + + E +K GI V+ F + G ++F L+ +
Sbjct: 67 QRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMG---DNFDKALEAE 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G ++ FK + Q I V++ + + + + K ++++ +
Sbjct: 124 GYTEDTFKDVIKNQVI-NQAVQDYIIKDVKVTDEDAQKYYDENK----QQFVAKDSGVLT 178
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQ 245
+N+ QK + + + K E S+ + + L +
Sbjct: 179 KHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKSENKKPIAENLGVVPAENSGLVQE 238
Query: 246 FQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F + LK + + P TQ G I + G ++ S K +K ++
Sbjct: 239 FVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKF 298
Query: 305 VKKL 308
+
Sbjct: 299 KADM 302
>gi|213419168|ref|ZP_03352234.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 170
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--------EL 72
+L+ ++ S+ + + ++ +N V+ + D+ + +KL L
Sbjct: 7 LLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATL 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI++ + Q +K G+ ++ A+ ++ + S L G+ +
Sbjct: 67 RHQILERLIMDQIILQMGQKMGVKITDEQLDQAIANIAKQNNMTMDQMRSRLAYDGLNYS 126
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
++ + + I +V N+ + L E+ A
Sbjct: 127 TYRNQIRKEMIISEVRNNEVRRRITVLPQEVDA 159
>gi|310825131|ref|YP_003957489.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1]
gi|309398203|gb|ADO75662.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1]
Length = 330
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 99/287 (34%), Gaps = 28/287 (9%)
Query: 40 SRIRTTINGEVITDGDISKRI-ALLKLQKINGELEKIA-------VQELIVETLKKQEIE 91
+ + +NGEV+ + + + L + + + LI L Q+ +
Sbjct: 32 ANVVAMVNGEVLGRAEFEQELWRELSSAEGPERTPEEVEPFKRALLDTLIKRMLLLQQAK 91
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ +T + V+ ++ + AE+FS L + + + A + I + N
Sbjct: 92 QYNLTVTPDEVDRRMLRLSG--DYPAENFSEVLAQGQMSLAELRAREANRLIIEKLFTNH 149
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE--ESR 209
+ E E+ A Y F P+ Q V+ + +A +++
Sbjct: 150 VYARVAVTEEELRAA-----------YTAHEAEFQEPEQVHAAQLVVKG-LDEARRVQAQ 197
Query: 210 LRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
L+ K L + S D + G + + P F ++ ++ T+ G
Sbjct: 198 LKAGKKFADLARRYSLSADAKVGGDLGFFPRGQMPPVFDEVVFNLRPGQVSDVVSTEYGY 257
Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + + + ++A + A+ K E+ + K L A
Sbjct: 258 HLFRVLEFKPARKRDFVEVRAKVEAREVKRKQEEAHEAFEKALLDKA 304
>gi|85713800|ref|ZP_01044790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp.
Nb-311A]
gi|85699704|gb|EAQ37571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp.
Nb-311A]
Length = 305
Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 95/307 (30%), Gaps = 50/307 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDI---SKRIALLKLQKING 70
L + + V V A + + +NG I D+ + + Q
Sbjct: 15 RLASSALGGCLAAVLFVGTPVHAADADPVLAKVNGTEIHQSDVNLAEQELGPSLAQMDPA 74
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ + LI + + E+ I E+F L
Sbjct: 75 AKQENILSFLIDMKIITKAAEEKKIENS-------------------EEFKKRLA----- 110
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ + + ++ + + M+ + + +E R +L D
Sbjct: 111 ------FARDRLLMDRLLASQGKAAITDDAMKTVYADASKQITSEQEVHARHILVPTEDE 164
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ +G ++K D +L K SK S G + + + P+F +
Sbjct: 165 AKKIEGELKK------------GADFAELAKKESKDPGASDGGDLGFFTKEQMVPEFSKV 212
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++P TQ G I + +KR + + T+ K +AEYV KL
Sbjct: 213 AFALEPGKISDPVKTQFGWHIIKVEEKRARKAPDFDQVKPQIEQFVTR--KAQAEYVAKL 270
Query: 309 RSNAIIH 315
R A I
Sbjct: 271 RETAKIE 277
>gi|15611671|ref|NP_223322.1| hypothetical protein jhp0604 [Helicobacter pylori J99]
gi|4155156|gb|AAD06185.1| putative [Helicobacter pylori J99]
Length = 413
Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 95/280 (33%), Gaps = 37/280 (13%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 160 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 213
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN-L 159
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 214 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 272
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E ++ K K I TV + NQ +++ + D + K K+
Sbjct: 273 ETKMREYYNKHKEQFSIPTEIETVRY-----TSTNQEDLERAMADPNLEVPGVSKANEKI 327
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG----VEYIAICD 274
E L+PQ + + Q + T G
Sbjct: 328 E------------------MKTLNPQIAQVFISHEQGSFTPVMNGGGGQFITFYIKEKRG 369
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K ++ K +++ + +K E+ +KLR + I
Sbjct: 370 KNEVSF-SQAKQFIAQKLVEESKDKILEEHFEKLRVKSRI 408
>gi|227485003|ref|ZP_03915319.1| possible peptidylprolyl isomerase PrsA [Anaerococcus lactolyticus
ATCC 51172]
gi|227237000|gb|EEI87015.1| possible peptidylprolyl isomerase PrsA [Anaerococcus lactolyticus
ATCC 51172]
Length = 343
Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 94/275 (34%), Gaps = 23/275 (8%)
Query: 43 RTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+NGE I+ ++ + L+ VQ ++ + L +++ + I
Sbjct: 47 IAIVNGEKISKDAYKAEMSFYGSMLASRQNLKNSIVQMMVQDKLIADDMKANKIEISDKE 106
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
VN F+ + G E F LD + FK+ + ++ + F ++ E
Sbjct: 107 VNDAFLNSVKQFGGQ-EQFDKMLDDYNMDVEKFKETVKKDLMYKKH-REWFEKEHPVTEE 164
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
EI + K+ + +L +K K+ ++ + ++
Sbjct: 165 EIKQYYEDNKDKFAKR-DASHILV-----------ADEKTAKEVKDKLDKGADFAALAKE 212
Query: 222 FAS-KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
++ + + G+ + +F++ + + P TQ G I + D
Sbjct: 213 YSKDTANAANGGELGTFSRGQMVKEFEDAAFSLKEGEISGPVKTQFGYHIIKVNKIADSI 272
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ T +K ++Y+K+L A +
Sbjct: 273 EDN------KEAITKALNDKKYSDYIKELNKKANV 301
>gi|168704077|ref|ZP_02736354.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gemmata
obscuriglobus UQM 2246]
Length = 309
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 95/311 (30%), Gaps = 25/311 (8%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------KING 70
L + + A + + T+NGE IT ++ ALLK
Sbjct: 6 ALSLTLLAGSTFALAQPPAANPNLAATVNGEQITLAEVD---ALLKTTLPLTPLTAAQKR 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ + +++ + L +Q + K+G D ++ + + F + G
Sbjct: 63 QMRVEVLADMVDDVLLRQFLRKNGPKVDPAEIDAQLKAFGEKLKAEGKTLADFYRETGQT 122
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFSI-- 187
+ K+ W ++ +K E ++ A K+ E +R V+
Sbjct: 123 EAQVKE------AWTTAMQLTGYVKSNATEEQLKAYFAANKDHFDRVEVKVRHVVLRAGK 176
Query: 188 ---PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
P + + ++ D +L K S IG
Sbjct: 177 SASPAERAAAKEKLEAIRADIAGGKLDFADAAKKHSHCPSGPAGGDIGVIYRKGGIVDEA 236
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ + T G I + +++ K+ +T + ++ A+
Sbjct: 237 FAKAAFALKPGELSGVVETDFGYHLIQVTERKPGTPTTYDKSATDVLDTYS--DEFRADL 294
Query: 305 VKKLRSNAIIH 315
+ KLR I
Sbjct: 295 IAKLRKQGQIQ 305
>gi|254455883|ref|ZP_05069312.1| PPIC-type PPIASE domain protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082885|gb|EDZ60311.1| PPIC-type PPIASE domain protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 309
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 108/293 (36%), Gaps = 21/293 (7%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELI--VETLK 86
S + ++I +N E+IT DI + L++ + +I+ LI
Sbjct: 22 SKSSENKILFKVNNEIITSLDILNEVQYLQIINKEFKNIKKEDAFQISKNSLIREKIKEI 81
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ + I +N + + ++ ++ +F F + I N ++ + ++ +W
Sbjct: 82 EIKKIIKDIKIKDQVLNNLILNYFKDLKITSIPEFEKFFLNKNINPNMIRKKITLEMLWN 141
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ + + I + KN E+LI +LF I +N+ N +
Sbjct: 142 QLIYTKYKKNVKINKQLIINDL--KKNDKQSEFLISEILFDINENENLND------KSNV 193
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNPYVTQ 264
+ + ++ GK ++ ES L + F L K TNP +
Sbjct: 194 INNSIEKNDFSQTALIYSISNTANKGGKLGWVKESILSKKIFNELKKLKIGEHTNPILVP 253
Query: 265 KGVEYIAICDKRDLGGEIALKAYLS---AQNTPTKIEKHEAEYVKKLRSNAII 314
G + + D R + + L + + T ++ + Y K++ + II
Sbjct: 254 GGFLILKLIDLRQVKKDFDLDKEIKKIVDEKTNQQLNRFSNIYFNKVKKDTII 306
>gi|15892946|ref|NP_360660.1| hypothetical protein RC1023 [Rickettsia conorii str. Malish 7]
gi|34581354|ref|ZP_00142834.1| hypothetical protein [Rickettsia sibirica 246]
gi|81527992|sp|Q92GU9|Y1023_RICCN RecName: Full=Uncharacterized protein RC1023; Flags: Precursor
gi|15620140|gb|AAL03561.1| unknown [Rickettsia conorii str. Malish 7]
gi|28262739|gb|EAA26243.1| unknown [Rickettsia sibirica 246]
Length = 295
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 27/303 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A I ++N E IT + R ++ + +L
Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A++ LI E+L Q + + +L + + +
Sbjct: 64 DLALKSLIDESLLFQYAGDR--EIPQEEIENAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 FISQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSKD 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
+ + RL K C ++K S + + + S + Q ++
Sbjct: 174 GGNKAFTQ----MNNLKNRLKK-CADVKK--SLYDNFATMQIITDKLSKIEGVKQTIVKD 226
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +N + E +C K+ L Y+ T KI + + + +R
Sbjct: 227 LTPDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKK 286
Query: 312 AII 314
A I
Sbjct: 287 AAI 289
>gi|157164911|ref|YP_001467478.1| putative periplasmic protein [Campylobacter concisus 13826]
gi|112801060|gb|EAT98404.1| putative periplasmic protein [Campylobacter concisus 13826]
Length = 276
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 103/304 (33%), Gaps = 36/304 (11%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+ + ++ ++ S M + I + E IT ++ L++ E+ A
Sbjct: 1 MKKLLFLAAGVLSALNLYSAQMINGIAAIVENEPITLYEV------YSLKEQLKTTEQDA 54
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI + L+ +I+ ++ +N A+ G++ F + + QG+ FK
Sbjct: 55 LNLLIRDRLEDAQIKNLNLSVTPFELNDRIEAIAKQNGMTNSQFRNSIQAQGMDFLDFKN 114
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
L + + + K+ N+ + + + V+ +
Sbjct: 115 NLEHKMLQEKLYKSIAAEAGKNINEQKAKAYFDANPDKFKVFSTARVVVYRAKDP----- 169
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QN 255
D + +K + K+ D + L + P+ ++ +
Sbjct: 170 ------------------DLLEAQKTSPKLLDGVQTQEVSLDYQSIDPRLAAIISSTNNG 211
Query: 256 NTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ T P + + +K ++ K + + + EK ++Y +KLR+
Sbjct: 212 DYTQPLQGPDSFDMFLVKEKIGSYTPSFADV--KDNVINELYQGEQEKLMSDYFEKLRAK 269
Query: 312 AIIH 315
A I
Sbjct: 270 AKIQ 273
>gi|93006523|ref|YP_580960.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter
cryohalolentis K5]
gi|92394201|gb|ABE75476.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter
cryohalolentis K5]
Length = 465
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 102/296 (34%), Gaps = 21/296 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
MT+ + + + + + + I +N I D+ I
Sbjct: 20 MTALGMSVSAQAATVNSAKAQATTTQKNNVARLTPANSTDGIIALVNENAILKSDLIAAI 79
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
A + + + +L+ + LI+ L+ I++ G+ D ++N Q A+
Sbjct: 80 AQTQARAKAAGEPIANSAQLQSEVLNALILRELQLSLIKRVGLNPDEASINKRLEQIAKA 139
Query: 113 TGL-SAEDFSSFLD--KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NK 167
GL S LD + G + L + + + + E +I A
Sbjct: 140 EGLNSIAALQQRLDSAQSG-SYATLRAQLIEDAAIQALQQRQITNRVRISEQDIDAFLAS 198
Query: 168 QKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ K + EY V + + D ++ +K A++ R RL + + +
Sbjct: 199 PEAKRLNQSEYQTVHVRVPYMDDYSRLSEAQRNDALKVAQKLRTRLLVPNVNVAEAIAAS 258
Query: 227 HDV-----SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
G + + L + + + K + + P VT +G++ I + +K+
Sbjct: 259 QGSYPIPLQGGDMGFHKAAALPTELSSEITKLEVGAVSAPLVTPEGIDIIKLANKK 314
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 66/155 (42%), Gaps = 7/155 (4%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
ANK+ + V ++ R +L + ++LQ +++I D S+LR + L S
Sbjct: 311 ANKKANDTMLVPQWNTRHILVKV--DELQTDALAEQKINDL-YSQLRNGAAFDSLASTYS 367
Query: 225 KIHDVSIG--KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ ++ E + F+ ++K + + + P+ TQ G + + KR
Sbjct: 368 DDPGSAGRGGDLDWVGEDQMIAPFEAMMKNTAVGDYSAPFKTQFGWHILKVEGKRQQDVS 427
Query: 282 IALKAYLSAQNTPTKIEKHEA-EYVKKLRSNAIIH 315
+ ++ Q ++ +++++LR+ A I
Sbjct: 428 DEYRRTMARQALYQRLAPQAKEDWLQELRAGAYIQ 462
>gi|157828877|ref|YP_001495119.1| hypothetical protein A1G_05640 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933604|ref|YP_001650393.1| hypothetical protein RrIowa_1217 [Rickettsia rickettsii str. Iowa]
gi|157801358|gb|ABV76611.1| hypothetical protein A1G_05640 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908691|gb|ABY72987.1| hypothetical protein RrIowa_1217 [Rickettsia rickettsii str. Iowa]
Length = 295
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 27/303 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A I ++N E IT + R ++ + +L
Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVASLTPAQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+A++ LI E+L Q + + +L + + +
Sbjct: 64 DLALKSLIDESLLFQYAGDR--EIPQEEIENAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 FISQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSKD 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
+ + RL K C ++K S + + + S + Q ++
Sbjct: 174 GGNKAFTQ----MNNLKNRLKK-CADVKK--SLYDNFATMQIITDKLSKIEGVKQTIVKD 226
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +N + E +C K+ L Y+ T KI + + + +R
Sbjct: 227 LTPDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKK 286
Query: 312 AII 314
A I
Sbjct: 287 AAI 289
>gi|219682071|ref|YP_002468455.1| survival protein SurA precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219621804|gb|ACL29960.1| survival protein SurA precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311085883|gb|ADP65965.1| survival protein SurA precursor [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311087036|gb|ADP67116.1| survival protein SurA precursor [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087600|gb|ADP67679.1| survival protein SurA precursor [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 430
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 94/267 (35%), Gaps = 15/267 (5%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEI 90
I +N E+I + D+++ + LK K L++ +++LIV++L QE
Sbjct: 24 QVDNITAIVNDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSLILQEA 83
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQSIWPD 146
I ++ A +S F + + I ++F + + I
Sbjct: 84 NSKNINITKEQIDTVIKNIALKKHISVNHFKKQILLRNIKNPSYYDNFIKKIEILLKMKT 143
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + E E+ +K+ + I +P K + V+ RIK AE
Sbjct: 144 IQDYELHKRINISEQEVNTIFKKLIKDNEKFKKINLSYILLPSFKQDSDNAVRNRIKIAE 203
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262
+L K + + + S + K + D+ F L + P V
Sbjct: 204 NIVYKLKKGYDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQILGPIV 263
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLS 289
KG+ + + D I + Y+
Sbjct: 264 GDKGLYILKVNDIHHKKENIVTEFYMQ 290
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K V E+ ++ L P L N +K E + + + ++ + + +
Sbjct: 280 KENIVTEFYMQHCLIK-PSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNLSDDYYSSN 338
Query: 231 I-GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G ++ + L + L +N + P + G I D+R + LK
Sbjct: 339 KKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDAFYKLKKNQ 398
Query: 289 SAQNT-PTKIEKHEAEYVKKLRSNAIIH 315
+ KI + +++ L++ A I
Sbjct: 399 AFNIVLNQKIISEKNHWIEDLKNTAYIE 426
>gi|218562900|ref|YP_002344679.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|112360606|emb|CAL35403.1| possible periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|315928422|gb|EFV07735.1| surA N-terminal domain protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 271
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 32/296 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + + K E F N + +
Sbjct: 118 ------EKRKLYEKIASMAKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTL 169
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
++ + ++ + K N + L S + + +
Sbjct: 170 ENIKNTKKTILKPQNASLNT----SNADPRLLG--LLSQIP----------VGSFSPVLN 213
Query: 263 TQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ G E + K +K + + + +Y KLRS I Y
Sbjct: 214 GKNGYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 269
>gi|317010879|gb|ADU84626.1| hypothetical protein HPSA_03125 [Helicobacter pylori SouthAfrica7]
Length = 414
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 161 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 214
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 215 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 273
Query: 161 M 161
Sbjct: 274 E 274
>gi|268316286|ref|YP_003290005.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
gi|262333820|gb|ACY47617.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
Length = 350
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 107/300 (35%), Gaps = 25/300 (8%)
Query: 32 SYKSWAMSSRIRTTINGE----VITDGDISKRIALLKLQKING---------ELEKIAVQ 78
+ S + + E +T + ++++ + LQ+ E+ K ++
Sbjct: 48 QVGAPVSDSTVAAIVTSEYGSDTLTAEEFRQQLSFI-LQRYPQIQMNPALMPEVHKSIIE 106
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+ IV + EI + GI D V Q S E F L + G+ ++ + +
Sbjct: 107 DFIVRHVVDGEIARQGIQADPAAVEQELEQIRARFP-SPEAFQEALTQDGLTEDSLRGMI 165
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q + + + + ++ + E ++ +LF + N + +
Sbjct: 166 -AQMVRQRTFREQIESRATPPTDDEVEQFRQQQ---AEEVHVQHILFRLAPNASEEEAAA 221
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL---LKKSQ 254
K A +R D ++ + S+ G ++ + F+ L+ S
Sbjct: 222 VKARAQAVLDSIRSGADFAEMARRHSEDGSAQEGGDLGFIRRGETVEPFEEAAFALRDSG 281
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ TT P T+ G I + ++R A +A Q + ++ +++L + A +
Sbjct: 282 DVTTEPVRTRFGYHLIRLLERRQGTPMDAAEA--REQLLQERKQEAVQHLLEELLAKATV 339
>gi|149178604|ref|ZP_01857190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces maris
DSM 8797]
gi|148842530|gb|EDL56907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces maris
DSM 8797]
Length = 317
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/314 (12%), Positives = 98/314 (31%), Gaps = 13/314 (4%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMS---------SRIRTTINGEVITDGDISKRIAL 62
FI L + + V + ++ + S + + +++ T+NG +T D+
Sbjct: 2 FISLRSIFIVSSLALLMFAPASDSLSAADKAPAIKDTTKVLVTVNGHPVTQADLDFATLT 61
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
++ ++ LI + L + + I ++ + + D
Sbjct: 62 RRMAGDQKPNPAQLLESLINQRLIQDFLVDKKIKVPVELLDQSVSRIRSIIRKTDGDPDQ 121
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
L + G + + + W + + I R L++
Sbjct: 122 TLSQMGFPPEKLRAAIELPLAWSIYASTQITPEKIQNYFAEHREELDGTRIEARHILLKP 181
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
S ++ + + + K + +L + + SK + + Y + L
Sbjct: 182 EDPSNQESIDKAKAQLADIRKQILDGKLTFAEAAVQHSTAPSKQDGGKLVPSAYRGKMPL 241
Query: 243 HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
Q + + + P+ T G+ + K + + + +
Sbjct: 242 V-LTQKIFPLEEGAISEPFQTPFGIHIAQLNKKHPGQFSL---EDVRGEIYRSLSRSLWD 297
Query: 303 EYVKKLRSNAIIHY 316
+ ++ LRS+A I +
Sbjct: 298 KTIQSLRSSAKIDW 311
>gi|219681515|ref|YP_002467900.1| survival protein SurA precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471196|ref|ZP_05635195.1| survival protein SurA precursor [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219624358|gb|ACL30513.1| survival protein SurA precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 430
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 93/267 (34%), Gaps = 15/267 (5%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEI 90
I +N E+I + D+++ + LK K L++ +++LIV++L QE
Sbjct: 24 QVDNITAIVNDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSLILQEA 83
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQSIWPD 146
I ++ A +S F + + I ++F + + I
Sbjct: 84 NSKNINITKEQIDTVIKNIALKKHISVNHFKKQILLRNIKNPSYYDNFIKKIEILLKMKT 143
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + E E+ +K+ + I +P K + V+ R K AE
Sbjct: 144 IQDYELHKRINISEQEVNTIFKKLIKDNEKFKKINLSYILLPSFKQDSDNAVRNRTKIAE 203
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYV 262
+L K + + + S + K + D+ F L + P V
Sbjct: 204 NIVYKLKKGYDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQILGPIV 263
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLS 289
KG+ + + D I + Y+
Sbjct: 264 GDKGLYILKVNDIHHKKENIVTEFYMQ 290
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K V E+ ++ L P L N +K E + + + ++ + + +
Sbjct: 280 KENIVTEFYMQHCLIK-PSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNLSDDYYSSN 338
Query: 231 I-GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G ++ + L + L +N + P + G I D+R + LK
Sbjct: 339 KKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDAFYKLKKNQ 398
Query: 289 SAQNT-PTKIEKHEAEYVKKLRSNAIIH 315
+ KI + +++ L++ A I
Sbjct: 399 AFNIVLNQKIISEKNHWIEDLKNTAYIE 426
>gi|113867525|ref|YP_726014.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16]
gi|113526301|emb|CAJ92646.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16]
Length = 264
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/301 (18%), Positives = 97/301 (32%), Gaps = 50/301 (16%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ F + +++ S ++ +NG+ I+ + K IA Q N EL A LI
Sbjct: 6 LSFSLAAVLAAGSLPAIAQNAAVVNGKAISSAKLDKLIAGTG-QPDNPELRSRARNMLID 64
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L QE K G+T V Q AR L+ F ++ G D ++
Sbjct: 65 RELLVQEANKRGLTQRD-DVQEQLEQ-ARLNVLAGAVFEDYVKTHGASDAELRKQY---- 118
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+K K + +EY R +L ++
Sbjct: 119 -----------------------DKIKSQFGNGKEYHARHILVE------------KEAD 143
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLL-KKSQNNTT- 258
A ++++ + K +SK + G + S P+F + + T
Sbjct: 144 AKAIIAKIKGGAKFEDMAKASSKDPGSAANGGDLDWANSSSYVPEFSAAMTGLKKGQLTD 203
Query: 259 NPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
P TQ G I + D RD E ++ + +K L+ A I
Sbjct: 204 TPVKTQFGWHIIELVDVRDAKIPSFEEVKPQLTQMLMGDQNWQREQFQAMMKSLKDKAKI 263
Query: 315 H 315
Sbjct: 264 Q 264
>gi|304406731|ref|ZP_07388386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
gi|304344264|gb|EFM10103.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
Length = 362
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 84/278 (30%), Gaps = 27/278 (9%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NG IT+ R L G K + LI L KQE +K GI +
Sbjct: 102 VAVVNGVRITE-----RQLYEGLL--GGGRGKTQLDNLIDTELVKQEADKKGIVVSDADI 154
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
R G S E + L + + L Q ++++ + +
Sbjct: 155 AAELAVMVRRIG-SEEALNEALKQNQLTVEDLYPDLIQQVRLRKLLQSRIHITDQEVRDY 213
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
EY+ + ++ + +K+ D + K
Sbjct: 214 Y---------TENLEYITQPEQVRASHILVETKAEADIIVKELNN-----GGDFATIAKQ 259
Query: 223 ASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
S + G Y + F++ + P ++ G I + D +
Sbjct: 260 KSLDTGSKNAGGDLGYFERGVMDQSFEDAAFSLKVGEISKPVKSEFGYHIILVTDHKAAV 319
Query: 280 GEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
KA + T KI + A +++ LR+ A I
Sbjct: 320 TPTFEEEKATIREMLTTEKIYELAATFIEGLRAQAKIE 357
>gi|291277475|ref|YP_003517247.1| hypothetical protein HMU12700 [Helicobacter mustelae 12198]
gi|290964669|emb|CBG40524.1| putative periplasmic protein [Helicobacter mustelae 12198]
Length = 300
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 102/280 (36%), Gaps = 33/280 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ I T+NG+ IT I + KL E+ A+ L+ + +K+QEI++ I D
Sbjct: 44 AGIAITVNGDPITLYQIKQTAKEQKL------TEEKAIDFLVAQKIKEQEIKRLKINIDE 97
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
++ A G+ + F S + K Q + + FK++L Q +++++ M +
Sbjct: 98 EKIDNEIQNMAYRNGMDTKTFLSAIKKEQHMSEREFKKHLKEQMETQELMRSVLMSNGNS 157
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E + N E+ + + + + ++ + R
Sbjct: 158 AGEE---EMRDYYNKHRGEFNMPKEVLVVRYSAKSSELLEEAIKHPDTAMR--------- 205
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
+ + + L PQ + ++ N + ++ K +
Sbjct: 206 ----------GVERVQEKMSLASLAPQIGQVFATTKINEFTTILNAGNNTFVTFLIKEKI 255
Query: 279 GGE----IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G E K +++ + + +K ++ +K++ A I
Sbjct: 256 GEEQITFQQAKNFITQKLIEKRQDKILEDHFEKIKQKASI 295
>gi|148264947|ref|YP_001231653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
gi|146398447|gb|ABQ27080.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
Length = 341
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 96/288 (33%), Gaps = 16/288 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKI-----NGELEKIAVQELIVETLKKQEIEKSGITF 97
+N +IT D+ + + +L Q E K A + + + + + + ++G
Sbjct: 53 VAKVNDTIITRLDLDRAVKVLVSQNRLPQPLPPESLKQAEEAALDQLISAELLYQAGQKT 112
Query: 98 DSNTVNYFFVQHARNTGL---SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + + SA++F L + + K++ + + ++ +
Sbjct: 113 EIRDLEKQVEEKVSQNKAKFPSADEFEKALKSVEMTEKDLKEFTRKDVVISNFIEKNIAE 172
Query: 155 KYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
K E + + K +L + + + K +A +++
Sbjct: 173 KTKVTEADAKKFYDDNPDKFKQEPSVKASHILCGVEASATAEEKKKAKEKAEALLKKIKA 232
Query: 213 PKDCNKLEKFASKIHDVS-IGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYI 270
+D L K S G + + + P + ++ TQ G I
Sbjct: 233 GEDFATLAKSESTCPSSKQGGDLGFFSKGQMVAPFEKAAFALKPGEVSDVVETQFGYHII 292
Query: 271 AICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +K++ G + + + KI+K E + +L+ A I
Sbjct: 293 KLTEKKEGGTIKFDEVKEK-IENYLKNLKIQKAIGECLVELKGKAKIE 339
>gi|317177476|dbj|BAJ55265.1| hypothetical protein HPF16_0668 [Helicobacter pylori F16]
Length = 419
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 166 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 219
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 220 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 278
Query: 161 M 161
Sbjct: 279 E 279
>gi|208434581|ref|YP_002266247.1| hypothetical protein HPG27_621 [Helicobacter pylori G27]
gi|208432510|gb|ACI27381.1| hypothetical protein HPG27_621 [Helicobacter pylori G27]
Length = 415
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + QK + + A LI E +K QEIE+ I D +
Sbjct: 162 GISLLVNGSPITLYQIQEE------QKKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 215
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 216 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 274
Query: 161 M 161
Sbjct: 275 E 275
>gi|238650989|ref|YP_002916845.1| hypothetical protein RPR_06330 [Rickettsia peacockii str. Rustic]
gi|238625087|gb|ACR47793.1| hypothetical protein RPR_06330 [Rickettsia peacockii str. Rustic]
Length = 295
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 96/303 (31%), Gaps = 27/303 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGELE 73
L++ V + A I ++N E IT + R ++ + +L
Sbjct: 4 LLLIITVFFTFNVAQASLPNIVASVNDEPITLNEFRARKKMIMALNNVESLTPAQDKQLS 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ LI E+L Q + + +L + + +
Sbjct: 64 DLVLKSLIDESLLFQYAGDR--EIPQEEIENAIKSIEDRNKMPHGSLLQYLKSRSVNPDS 121
Query: 134 FKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 FISQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSKD 173
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-K 251
+ + RL K C ++K S + + + S + Q ++
Sbjct: 174 GGNKAFTQ----MNNLKNRLKK-CADVKK--SLYDNFATMQIITDKLSKIEGVKQTIVKD 226
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +N + E +C K+ L Y+ T KI + + + +R
Sbjct: 227 LTPDKASNVFEVNNKFEITLVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRKK 286
Query: 312 AII 314
A I
Sbjct: 287 AAI 289
>gi|323701603|ref|ZP_08113275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
nigrificans DSM 574]
gi|323533376|gb|EGB23243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
nigrificans DSM 574]
Length = 341
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 103/303 (33%), Gaps = 28/303 (9%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI--------------NGELEKIAVQELIVETL 85
+ + T+NG+ IT ++ K++ + Q +LEK + +LI +TL
Sbjct: 27 ADVVATVNGKEITRAELDKQVNMTVEQYKQQGIDLTSKENKDMKAQLEKSVLDDLITKTL 86
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE E+ +T V+ G EDF L + + + ++ + + +
Sbjct: 87 LMQEAERQKLTPSKEEVDKSIKDIKATFG-KEEDFKKALAEVKMTEQDVREDITFRLTYQ 145
Query: 146 DVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLF----SIPDNKLQNQGFVQ 199
+V E EI N+ K + T ++ +LF +P+ + +
Sbjct: 146 KLVDKVTADVKAPTEAEIAKYYNEHKDQFGTPERLEVKHILFAFDGKVPNAPKRTEAEAL 205
Query: 200 KRIKDAEESRLRLPKDCNKLEKFAS---KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255
+ K A + +D + + S + P F+
Sbjct: 206 QAAKLALAEITQKGRDFAAVAREKSDDLGTRENGGSYTVDKGAGTTDPAFEKAAAALKPG 265
Query: 256 NTT-NPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
T P + G I + + K ++AQ + +++V +L+ A
Sbjct: 266 EITKQPVKSAYGYHLIKLEKIEPATQKSLAEVKDQIAAQLESEAKQAKFSQFVDELKKKA 325
Query: 313 IIH 315
I
Sbjct: 326 EID 328
>gi|308061989|gb|ADO03877.1| hypothetical protein HPCU_03575 [Helicobacter pylori Cuz20]
Length = 403
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 150 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 203
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 204 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 262
Query: 161 M 161
Sbjct: 263 E 263
>gi|322419887|ref|YP_004199110.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
gi|320126274|gb|ADW13834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
Length = 446
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 96/295 (32%), Gaps = 21/295 (7%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGEL---------EKIAVQELIVETLKKQE 89
++ + +NG VIT + + + ++ Q E E A+ +L L QE
Sbjct: 153 ANILVLRVNGSVITKQALDRAVKVMLAQNQVKEPLSPEAQKEAEAAALDQLTSAELLYQE 212
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K + + Q+ + +F L + + + + ++
Sbjct: 213 ASKLDMPELDKQIEEKVAQNRAKFK-TDAEFIEALKSIDMTMQDMQDFTRRDLMINHFIE 271
Query: 150 NDFMLKYGNLEMEI-----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
F+ K + E + K +L + + K +
Sbjct: 272 QKFIAKAVITDAEAKKFYEENLDRYFKKPESVR--ASHILVGSDEKATPEERKKAKEKAE 329
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262
A R++ +D + K S S G + P F+ Q T+
Sbjct: 330 ALLKRVKAGEDFAAIAKAESSCPSASQGGDLGTFGRGQMVPAFEKAAFALKQGETSGVVE 389
Query: 263 TQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ G I + +K++ G E K ++ K++K Y+ +L+ +A I
Sbjct: 390 SEFGYHIIKVTEKQEAGAEKFENAKDKIADFLKKQKVQKELISYIDQLKKSAKIE 444
>gi|307637349|gb|ADN79799.1| hypothetical protein hp908_0672 [Helicobacter pylori 908]
gi|325995941|gb|ADZ51346.1| hypothetical protein hp2018_0650 [Helicobacter pylori 2018]
gi|325997535|gb|ADZ49743.1| hypothetical protein hp2017_0649 [Helicobacter pylori 2017]
Length = 414
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 161 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 214
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 215 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 273
Query: 161 M 161
Sbjct: 274 E 274
>gi|207093124|ref|ZP_03240911.1| hypothetical protein HpylHP_10109 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 331
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 78 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 131
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 132 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 190
Query: 161 M 161
Sbjct: 191 E 191
>gi|302871263|ref|YP_003839899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
obsidiansis OB47]
gi|302574122|gb|ADL41913.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
obsidiansis OB47]
Length = 335
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/311 (18%), Positives = 110/311 (35%), Gaps = 29/311 (9%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRI------- 60
+ T VL+I I + +R +NGE IT + I+ R
Sbjct: 5 TKIAIFFITAIVLLIIVIAVTPEMVKYVDENRAVAIVNGEKITKKEFAINYRSQINYYGL 64
Query: 61 --ALLKLQKINGELEKI----AVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHAR 111
A L + + E+ + LIV ++ Q+ K IT S ++ Q+ +
Sbjct: 65 DKAFLSQKVGDKTYEQQIKENVLDGLIVRQIELQQARKRNITLTSTEKKAIDQQIEQY-K 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ S +F +L G +N +K + Q + + K + E+E N K
Sbjct: 124 SDSQSGAEFKQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKSQKASDAEIESYYNSHKS 183
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV- 229
+ E +LF + D+K + +KR + ++ + KL + S+
Sbjct: 184 DFV---EVKASHILFKVNDSK---EEAAKKRKAEEVLQMIKSGQSFEKLAQKYSEDETTK 237
Query: 230 -SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G Y + + +F++ + ++ T G I + D++ L
Sbjct: 238 QKSGDLGYFRKGQMVKEFEDAAFSLNIGEISSVVKTSYGFHIIKVTDRKQLSLNEVKDEI 297
Query: 288 LSAQNTPTKIE 298
S + K E
Sbjct: 298 KSTIESQKKDE 308
>gi|91202358|emb|CAJ75418.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 318
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 101/287 (35%), Gaps = 36/287 (12%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ +NG+ IT ++ + L G A+ LI TL QE K GI+ +
Sbjct: 47 VVAIVNGQKITSNELYE-----LLLSTYGN---EALDVLIRRTLINQEARKHGISLTTKE 98
Query: 102 VNYFFVQHARN--TGL-------SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
V + L + D L+K G FK L + +
Sbjct: 99 VENKINTLVQREVNALLQTYKIENEADLDKELEKIGASLKEFKDKLTKRLV--------- 149
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RL 210
E+E+ A K MK I+V E ++ SI K++ Q V K ++AEE+ +L
Sbjct: 150 ----KEAEIELRAEKVVMKTISVSEEDLQEAYKSIYGEKIEAQQIVLKTKREAEEALEKL 205
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269
RL D K+ K S + +L +++ + T G
Sbjct: 206 RLGADITKMAKAQSIDRASASRD-GKMLPFSPEDDIGKSVAHLKPGELSGIINTNYGYHI 264
Query: 270 IAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ I ++ + +K L K + ++ L +A I
Sbjct: 265 VKITGRKTGSDKKFDTVKKELEELVREKKYRERLRPWLVNLVESASI 311
>gi|71083415|ref|YP_266134.1| SurA-like protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91762162|ref|ZP_01264127.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062528|gb|AAZ21531.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|91717964|gb|EAS84614.1| hypothetical SurA-like protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 305
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 117/302 (38%), Gaps = 19/302 (6%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-KLQKINGELEKIAV---- 77
I+ + I+ + + ++ ++I I E+IT+ DI L L EL++ +
Sbjct: 5 ILIFLFVIICFHAQSIETKIIHNIQDEIITNIDIKNEFKYLVALNNSLKELDQEKILNIS 64
Query: 78 -QELIVETLKKQEIEK--SGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNH 133
+ +I E +KK EI K I + + L S +F +L + +
Sbjct: 65 NESIIREKIKKIEISKNFKEIKLNEDYSELLLKNIYSRLNLKSINEFEIYLKDYDLKISD 124
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
++ + I ++W +++ + K E + K I +EY + ++F + NK +
Sbjct: 125 IEKKITIDALWNELIIKKYSSKVVINEAVLKEELLKNNKIESKEYQLSEIIFEV-KNKEE 183
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ ++ +K E N ++ G ++ E+ L+ + +
Sbjct: 184 IEKKYKEVVKSINEIGFE-----NSAATYSFSDSAKIGGDIGWINENSLNNNIRKNISSL 238
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLR 309
+ T P + G+ + + + + + +I + + ++ ++ Y K++
Sbjct: 239 KVGEFTKPIILSNGILILKLINIKSSETTIDIENELKKAINYERNRQLNQYSKIYYNKIK 298
Query: 310 SN 311
N
Sbjct: 299 KN 300
>gi|207109059|ref|ZP_03243221.1| hypothetical protein HpylH_06914 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 240
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 65 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 118
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 119 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 177
Query: 161 M 161
Sbjct: 178 E 178
>gi|308184447|ref|YP_003928580.1| hypothetical protein HPSJM_03355 [Helicobacter pylori SJM180]
gi|308060367|gb|ADO02263.1| hypothetical protein HPSJM_03355 [Helicobacter pylori SJM180]
Length = 400
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 147 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 200
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 201 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 259
Query: 161 M 161
Sbjct: 260 E 260
>gi|317014080|gb|ADU81516.1| hypothetical protein HPGAM_03410 [Helicobacter pylori Gambia94/24]
Length = 415
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 162 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 215
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 216 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 274
Query: 161 M 161
Sbjct: 275 E 275
>gi|332673506|gb|AEE70323.1| SurA domain protein [Helicobacter pylori 83]
Length = 411
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|217032492|ref|ZP_03437984.1| hypothetical protein HPB128_156g22 [Helicobacter pylori B128]
gi|298736357|ref|YP_003728883.1| hypothetical protein HPB8_862 [Helicobacter pylori B8]
gi|216945838|gb|EEC24459.1| hypothetical protein HPB128_156g22 [Helicobacter pylori B128]
gi|298355547|emb|CBI66419.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 408
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 155 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 208
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 209 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 267
Query: 161 M 161
Sbjct: 268 E 268
>gi|108563069|ref|YP_627385.1| hypothetical protein HPAG1_0644 [Helicobacter pylori HPAG1]
gi|107836842|gb|ABF84711.1| hypothetical protein HPAG1_0644 [Helicobacter pylori HPAG1]
Length = 414
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 161 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 214
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 215 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 273
Query: 161 M 161
Sbjct: 274 E 274
>gi|317181972|dbj|BAJ59756.1| hypothetical protein HPF57_0682 [Helicobacter pylori F57]
Length = 411
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|311748700|ref|ZP_07722485.1| peptidyl-prolyl cis-trans isomerase (survival protein)
[Algoriphagus sp. PR1]
gi|311302821|gb|EAZ81480.2| peptidyl-prolyl cis-trans isomerase (survival protein)
[Algoriphagus sp. PR1]
Length = 458
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/319 (12%), Positives = 100/319 (31%), Gaps = 25/319 (7%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
L+ F L ++++++ + S + +I ++ ++ + DI +R L L +
Sbjct: 4 LNRFTLTLLSFWMILPLAAQEAPANGSGQVLDKIVAKVDNNILLESDI-QRAYLEALAQR 62
Query: 69 NG----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS--- 121
+ L+V L + E + V +Q + + + F
Sbjct: 63 QEGVTPPTRCEVFESLMVNKLMVAKAEIDSVVVTDAEV---MLQTDQRFNMVLQQFGGNE 119
Query: 122 SFLDKQ-GIGDNHFK----QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
L + G + K + Q I ++ E+ A + ++
Sbjct: 120 ETLAEVYGKTADQIKTEIEDVIKEQLIVQR-MRGKITEGLTVSPAEVRAFYNAIPKDSLP 178
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSI 231
+ + I + ++ + + + + + + A+ +
Sbjct: 179 LFTSEATVGQIVKKPEVSPKIKEEIFEKLRQFKQDILDGKSTFSELATAYSEDPGSRTQG 238
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
G + +L P++ L Q + P + G+ I + +KR+ + L
Sbjct: 239 GDLGFFRSGELAPEYEATALALKQGEISEPVESDFGIHLIQLLEKRNGSFNT--RHILMI 296
Query: 291 QNTPTKIEKHEAEYVKKLR 309
K Y+ L+
Sbjct: 297 PKPSEDDLKKAERYLDSLK 315
>gi|51894079|ref|YP_076770.1| putative post-translocation molecular chaperone [Symbiobacterium
thermophilum IAM 14863]
gi|51857768|dbj|BAD41926.1| putative post-translocation molecular chaperone [Symbiobacterium
thermophilum IAM 14863]
Length = 297
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 97/310 (31%), Gaps = 33/310 (10%)
Query: 10 SDFIKLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67
+ + ++ T V + + + + T+NGE IT ++ + KL
Sbjct: 10 TIALAVVATLVVAGLGGYFVGSSLQRPGTGNDPAVVATVNGEQITRDEVHQ-----KLMT 64
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
G V ++I+ L QE ++G+T V G FS L +
Sbjct: 65 YYG---AAVVDDMILTRLVDQEAARAGVTVTDAEVEEEVEATKAAYGGDLY-FSWALSQY 120
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ + F+ L + V++ L+ + + R+ +R +L
Sbjct: 121 GLSEAQFRDMLRRDMVATAVLRQQLQPDDATLKAYFDEMQSAEQ---TRKIKVRHILVDT 177
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQ 245
+ + + RL D +L + SK G + + D +
Sbjct: 178 EEKANEIKA------------RLDAGADFAQLAQAESKDTASAAKGGDLGLIGKGDTVSE 225
Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F + + P + G I K + Q K+ +
Sbjct: 226 FEAAAFALNDGEISAPVQSTYGWHIIQAYQLHFEQ----EKQTILEQYLNEKVSARLGTW 281
Query: 305 VKKLRSNAII 314
+LR NA I
Sbjct: 282 YSELRENAQI 291
>gi|15645283|ref|NP_207453.1| hypothetical protein HP0659 [Helicobacter pylori 26695]
gi|2313789|gb|AAD07729.1| predicted coding region HP0659 [Helicobacter pylori 26695]
Length = 414
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 161 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 214
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 215 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 273
Query: 161 M 161
Sbjct: 274 E 274
>gi|308182851|ref|YP_003926978.1| hypothetical protein HPPC_03490 [Helicobacter pylori PeCan4]
gi|308065036|gb|ADO06928.1| hypothetical protein HPPC_03490 [Helicobacter pylori PeCan4]
Length = 405
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 152 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 205
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 206 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 264
Query: 161 M 161
Sbjct: 265 E 265
>gi|308063548|gb|ADO05435.1| hypothetical protein HPSAT_03485 [Helicobacter pylori Sat464]
Length = 416
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 163 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 216
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 217 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 275
Query: 161 M 161
Sbjct: 276 E 276
>gi|188527492|ref|YP_001910179.1| hypothetical protein HPSH_03560 [Helicobacter pylori Shi470]
gi|188143732|gb|ACD48149.1| hypothetical protein HPSH_03560 [Helicobacter pylori Shi470]
Length = 426
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 173 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 226
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 227 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 285
Query: 161 M 161
Sbjct: 286 E 286
>gi|297379859|gb|ADI34746.1| Hypothetical protein HPV225_0667 [Helicobacter pylori v225d]
Length = 411
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|210134866|ref|YP_002301305.1| hypothetical protein HPP12_0672 [Helicobacter pylori P12]
gi|210132834|gb|ACJ07825.1| hypothetical protein HPP12_0672 [Helicobacter pylori P12]
Length = 414
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 161 GISLLVNGSPITLYQIQEE------QERSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 214
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 215 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 273
Query: 161 M 161
Sbjct: 274 E 274
>gi|153951819|ref|YP_001397624.1| hypothetical protein JJD26997_0433 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939265|gb|ABS44006.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 271
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 89/301 (29%), Gaps = 42/301 (13%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGILIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLTQNKTTLNAFKANLKSKNQSYEQFRANFKKDL 117
Query: 143 IWPDV---VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + N + + + + K K + + S L+N +
Sbjct: 118 EKRKLYEKISNMAKTDFSDDGAKKFFEQNKDKFTFYTQINAN-IYLSNNPQTLENIKNTK 176
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259
K I + + L + L S + + +
Sbjct: 177 KIILKPQNASL--------------NTSNTDPRLLG--LLSQIP----------VGDFSP 210
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIH 315
+ G E + K G + + + + + +Y KLRS I
Sbjct: 211 VLNGKNGYELYEVKSK--DGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIE 268
Query: 316 Y 316
Y
Sbjct: 269 Y 269
>gi|254779354|ref|YP_003057459.1| hypothetical protein HELPY_0712 [Helicobacter pylori B38]
gi|254001265|emb|CAX29242.1| Conserved hypothetical protein [Helicobacter pylori B38]
Length = 420
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 167 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 220
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 221 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 279
Query: 161 M 161
Sbjct: 280 E 280
>gi|67458647|ref|YP_246271.1| hypothetical protein RF_0255 [Rickettsia felis URRWXCal2]
gi|75536887|sp|Q4UMV2|Y255_RICFE RecName: Full=Uncharacterized protein RF_0255; Flags: Precursor
gi|67004180|gb|AAY61106.1| unknown [Rickettsia felis URRWXCal2]
Length = 296
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 103/304 (33%), Gaps = 28/304 (9%)
Query: 22 LIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQK--------INGEL 72
L++ I ++ + A I ++N E IT + R ++ + +L
Sbjct: 4 LLLIIITVFFAFNVAQASLPNIVASVNYEPITLNEFRARKKMIMALNNVESLTPAQDKQL 63
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+A++ LI E+L Q ++ + + +L + + +
Sbjct: 64 SDLAIKSLIDESLLFQYAGDR--EIPQEEIDNAIKSIEDHNKMPHGSLLQYLKSRSVNPD 121
Query: 133 HFKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
F + + I + ++ N E+++ K++ + + +K
Sbjct: 122 SFISQIKSELIKMNILSSLSRSVQVSNKEIDVAILSSDQKDV--------EISMQVFTSK 173
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL- 250
+ + RL K C ++K S + + + S + Q ++
Sbjct: 174 DGGNKAFTQ----MNNLKNRLKK-CADVKK--SLYDNFATMQIITDKLSKIEGVKQTIVK 226
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
S + +N + E I +C K+ L Y+ T KI + + + +R
Sbjct: 227 DLSSDKASNVFEVNNKFEIILVCSKKILNVNEDENNYVVNFLTNKKISQKAQKMFENMRK 286
Query: 311 NAII 314
A+I
Sbjct: 287 KAVI 290
>gi|291279541|ref|YP_003496376.1| hypothetical protein DEFDS_1151 [Deferribacter desulfuricans SSM1]
gi|290754243|dbj|BAI80620.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 314
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/314 (14%), Positives = 108/314 (34%), Gaps = 36/314 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------------ING 70
I+ ++ I ++ +NG+ I + +++ IA L L+
Sbjct: 6 ILGFLLAIFIVSFAFAEEKVAAKVNGKAIYESEVNTVIAELLLKNGIAPSSVDFNNPQLV 65
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
E++K +++LI + Q + N VN + + +++ L K +
Sbjct: 66 EIKKKILEQLIDREVLAQHSKTFTYKGIENDVNKKLDELKSGFK-TDKEYKDALQKNNLT 124
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIP 188
+ K+ + + + + + K E E NK K K + ++ ++
Sbjct: 125 ETELKEKIKKNILVKKQLDS-YKSKITVSEQEKKDFYNKNKDKFVIKDSVHVKHIVLLTG 183
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQ 247
D + + K++ D S L+ + L K S+ G Y+ + P+F+
Sbjct: 184 DKRSDEEA---KKLIDKIYSELKKGVNFEDLAKKYSEDGSAKMGGDLGYITRGKVVPEFE 240
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYI--------------AICD-KRDLGGEIALKAYLSAQ 291
+ + + P+ +Q G + + D + + L+ + +
Sbjct: 241 KVAFETEVGKISKPFKSQFGYHILKVVDKKKGKKLSYDEVKDQITKILSDQKLETMIKSN 300
Query: 292 NTPTKIEKHEAEYV 305
K + Y+
Sbjct: 301 IENWKKQDKIERYL 314
>gi|317012477|gb|ADU83085.1| hypothetical protein HPLT_03295 [Helicobacter pylori Lithuania75]
Length = 419
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 166 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 219
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 220 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 278
Query: 161 M 161
Sbjct: 279 E 279
>gi|319653565|ref|ZP_08007664.1| hypothetical protein HMPREF1013_04281 [Bacillus sp. 2_A_57_CT2]
gi|317394764|gb|EFV75503.1| hypothetical protein HMPREF1013_04281 [Bacillus sp. 2_A_57_CT2]
Length = 292
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 101/291 (34%), Gaps = 24/291 (8%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
+ + I + T+NGE I+ ++ +R+ + + +
Sbjct: 10 ILGSVVTIGAAAAIFFTIKEDDAAATVNGEEISRDELHERLV--------AQYGQELLDS 61
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI E + QE +K + ++ +A + G + L+ G+ F++ +
Sbjct: 62 LITEKVIDQEAKKENVKVTQEEIDEEKAVYAESYG-GEDALKQTLESSGLSMADFEEDIE 120
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+++ + ++ NK+ + +L +++ + +
Sbjct: 121 SYLATKKLLEPRIEISEEAMKTYFDENKESFAQ--EEQVSASHILV---EDEETAKEVIG 175
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
K + ++L ++ K A G + + D+ +F+ + +
Sbjct: 176 KLNDGGDFAKLAAEYSTDESNKDA-------GGDLGFFGKGDMVEEFEEVAFSLEPGKIS 228
Query: 259 NPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+P T+ G I + +K++ +K + T+++ ++++
Sbjct: 229 DPVKTEYGYHVIKVAEKQEAKEAAYEDVKEEVKNTLFETEMQTEYTAWLEE 279
>gi|261838101|gb|ACX97867.1| hypothetical protein KHP_0662 [Helicobacter pylori 51]
Length = 411
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|205375588|ref|ZP_03228375.1| protein secretion (post-translocation chaperonin) [Bacillus
coahuilensis m4-4]
Length = 301
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 103/300 (34%), Gaps = 25/300 (8%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+L + + +++ S++ ++GE I+ ++ R+ +++ G + +
Sbjct: 7 ILAVIALAVVIAM-SFSKGGETVAEVDGEKISKEELYDRL----VEQDQGAT----LNAM 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E L +E + G+ +N E F++ ++ G+ + K + +
Sbjct: 58 ISEVLIMKEAKDQGVEASDEEINEELETLYG-MYGGEEAFTNQIEASGMSLDEVKDDITL 116
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
++++ + ++ ANK + +L + + + + +
Sbjct: 117 FIYSNKLMEDRIEVTDEEIQEYFDANKASFDQ--QEQVKASHILVEDEETANEVKQKLDE 174
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN 259
AE D + + G + + + P+F+ + T
Sbjct: 175 GGDFAE-LAAEYSTDTSNASQ---------GGDLGFFGKGQMVPEFEEAAFGAEVGSITG 224
Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
P T G I + +K++ K + K ++ ++++L+ I Y
Sbjct: 225 PVQTDFGYHIIKVEEKQEAKEATLEDVKEEVRETIKQQKQQQEYPVWIEELKGKHDIKNY 284
>gi|153941271|ref|YP_001392892.1| peptidylprolyl isomerase [Clostridium botulinum F str. Langeland]
gi|189037912|sp|A7GJD2|PRSA_CLOBL RecName: Full=Foldase protein prsA; Flags: Precursor
gi|152937167|gb|ABS42665.1| foldase protein PrsA [Clostridium botulinum F str. Langeland]
gi|295320869|gb|ADG01247.1| foldase protein PrsA [Clostridium botulinum F str. 230613]
Length = 336
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/344 (14%), Positives = 108/344 (31%), Gaps = 45/344 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
S + +L ++ F +V A + +NGE I D+ + + ++
Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPNMQQV 60
Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
E +K ++ LI E + Q+ ++ + + +
Sbjct: 61 LSQIKTQYGEEFEKTEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + F L G K+YL Q + V+ E+
Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVIN------------EV 168
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEK 221
+ + + Y +F+ N + + K +A++ + RL +D K+ K
Sbjct: 169 TKDVKVEDKDAQKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAK 228
Query: 222 FAS-----KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S K +G Y + + + +NP TQ G I I K+
Sbjct: 229 EVSQDTGSKEKGGLLGDISYSDSNYDPTFMKAAIALKSGEISNPVHTQWGYHIIKINSKK 288
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + E + + +++ + + I Y
Sbjct: 289 EYPVKKFDSVKEDIKKQLKQEKQQEAYTKK-IEEWKKASKIKTY 331
>gi|317180456|dbj|BAJ58242.1| hypothetical protein HPF32_0660 [Helicobacter pylori F32]
Length = 411
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|217033711|ref|ZP_03439138.1| hypothetical protein HP9810_5g53 [Helicobacter pylori 98-10]
gi|216943900|gb|EEC23337.1| hypothetical protein HP9810_5g53 [Helicobacter pylori 98-10]
Length = 411
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|317178978|dbj|BAJ56766.1| hypothetical protein HPF30_0669 [Helicobacter pylori F30]
Length = 416
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 163 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 216
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 217 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 275
Query: 161 M 161
Sbjct: 276 E 276
>gi|315586661|gb|ADU41042.1| SurA domain protein [Helicobacter pylori 35A]
Length = 405
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 152 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 205
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 206 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 264
Query: 161 M 161
Sbjct: 265 E 265
>gi|261839514|gb|ACX99279.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
52]
Length = 426
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 173 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 226
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 227 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 285
Query: 161 M 161
Sbjct: 286 E 286
>gi|311104694|ref|YP_003977547.1| PPIC-type PPIASE domain-containing protein 1 [Achromobacter
xylosoxidans A8]
gi|310759383|gb|ADP14832.1| PPIC-type PPIASE domain protein 1 [Achromobacter xylosoxidans A8]
Length = 258
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 100/299 (33%), Gaps = 51/299 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQEL 80
++ +++ ++A + T+NG+ I + + + LL Q L + QE+
Sbjct: 5 VMLAAACVIAVPAFAQN---VATVNGKAIPQKSLDQFVKLLVSQGATDSPQLREQVKQEM 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + Q E SGI V L +QGI
Sbjct: 62 INRQIFVQAAEASGI-AKQADVQTEVE----------------LARQGILV--------- 95
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFV 198
+ D++ K+ + ++ A +K+K EY +R +L +
Sbjct: 96 -----RALMADYLAKHPVSDAKVTAEYEKIKKEQAGKMEYKVRHILVEDEKTANDLLAQI 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257
+ + + KD EK G + ++ P Q + + +
Sbjct: 151 KSNKSKFNDLAKKNSKDPGSAEK---------GGDLGWAPPTNYVQPFAQAVTQLKKGEL 201
Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P TQ G I + D R + E + Q ++ A+Y K+LR A I
Sbjct: 202 VDKPVQTQFGWHIIMVDDTRPV--EFPPLDQVRPQLEEMLRQQTLADYQKELREKAKIQ 258
>gi|317009325|gb|ADU79905.1| hypothetical protein HPIN_03345 [Helicobacter pylori India7]
Length = 411
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + Q+ + + A LI E +K QEIE+ I D +
Sbjct: 158 GISLLVNGSPITLYQIQEE------QEKSKVSKAQARDRLIAERIKNQEIERLKIHVDDD 211
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F L +G ++ L ++++N +
Sbjct: 212 KLDQEMAMMAQQQGMDLDHFKQMLMAEG-HYKLYRDQLKEHLEMQELLRNILLTNVDTSS 270
Query: 161 M 161
Sbjct: 271 E 271
>gi|170756164|ref|YP_001783178.1| peptidylprolyl isomerase [Clostridium botulinum B1 str. Okra]
gi|226712003|sp|B1IGZ5|PRSA_CLOBK RecName: Full=Foldase protein prsA; Flags: Precursor
gi|169121376|gb|ACA45212.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
B1 str. Okra]
Length = 336
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/344 (14%), Positives = 109/344 (31%), Gaps = 45/344 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
S + +L ++ F +V A + +NGE I D+ + ++ ++
Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60
Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
E +K ++ LI E + Q+ ++ + + +
Sbjct: 61 LSQIKTQYGEEFEKSEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + F L G K+YL Q + V+ E+
Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVIN------------EV 168
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEK 221
+ + + Y +F+ N + + K +A++ + RL +D K+ K
Sbjct: 169 TKDVKVEDKDAQKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAK 228
Query: 222 FAS-----KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S K +G Y + + + +NP TQ G I I K+
Sbjct: 229 EVSQDTGSKDKGGLLGDISYSDSNFDPTFMKAAIALKSGAISNPVHTQFGYHIIKINSKK 288
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + E + + +++ + + I Y
Sbjct: 289 EYPVKKFDSVKEDIKKQLKQEKQQEAYTKK-IEEWKKASKIKTY 331
>gi|168181007|ref|ZP_02615671.1| foldase protein PrsA [Clostridium botulinum NCTC 2916]
gi|226950994|ref|YP_002806085.1| peptidylprolyl isomerase [Clostridium botulinum A2 str. Kyoto]
gi|254783410|sp|C1FNE4|PRSA_CLOBJ RecName: Full=Foldase protein prsA; Flags: Precursor
gi|182668154|gb|EDT80133.1| foldase protein PrsA [Clostridium botulinum NCTC 2916]
gi|226843437|gb|ACO86103.1| prsA family protein [Clostridium botulinum A2 str. Kyoto]
Length = 336
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/344 (14%), Positives = 109/344 (31%), Gaps = 45/344 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
S + +L ++ F +V A + +NGE I D+ + ++ ++
Sbjct: 1 MKSAKKLLSVLCLGIFILTFTACDMVEKTPEAKAKSTIAKVNGEKIQRKDLDESPSMQQV 60
Query: 66 QKING------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
E +K ++ LI E + Q+ ++ + + +
Sbjct: 61 LSQIKTQYGEEFEKTEQGKEVIKEQKKQILENLITEKVLLQKGKELKVIPKDEELNKEAD 120
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + F L G K+YL Q + V+ E+
Sbjct: 121 KKVNEIKAVYNNDEKKFEETLKSTGFTKETLKEYLKDQIVIEKVIN------------EV 168
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEK 221
+ + + Y +F+ N + + K +A++ + RL +D K+ K
Sbjct: 169 TKDVKVEDKDAQKYYNENQSMFTEKPNTMNVSHILVKTEDEAKKVKKRLDAKEDFAKVAK 228
Query: 222 FAS-----KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S K +G Y + + + +NP TQ G I I K+
Sbjct: 229 EVSQDTGSKDKGGLLGDISYSDSNFDPTFMKAAIALKSGAISNPVHTQFGYHIIKINSKK 288
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + E + + +++ + + I Y
Sbjct: 289 EYPVKKFDSVKEDIKKQLKQEKQQEAYTKK-IEEWKKASKIKTY 331
>gi|32266195|ref|NP_860227.1| hypothetical protein HH0696 [Helicobacter hepaticus ATCC 51449]
gi|32262245|gb|AAP77293.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 101/280 (36%), Gaps = 35/280 (12%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ + +NG IT +I+ + LK+ K + A+ LI E LK EIE+ I+ +
Sbjct: 10 AGVAIRVNGHAITLYEIASLQSHLKISK------QAAIDMLINERLKDDEIERFKISIED 63
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
++ A N LS ++F + ++ + Q ++++
Sbjct: 64 FKIDEEIALLAANANLSKDEFLRKATHT-MSLQEYRTQIKKQLQTKELMQRILASNISIS 122
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ +E+LI + + + + + +
Sbjct: 123 SEDELLTYYTRHK---KEFLIPSQVRVVRYFSQTDNALQKAIQSPKQNI----------- 168
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ V+ + + S L+PQ + + NN P +T G +++ ++
Sbjct: 169 ----KGVQKVN----ETIALSSLNPQIAQVFIHTPNNEFTPVLTTGGNGFVSFL-VKERL 219
Query: 280 GEIA-----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
GE K ++ + K + AE+ K+RS+A I
Sbjct: 220 GETPINFEEAKPLINQKIMAQKEQSIIAEHFNKIRSSANI 259
>gi|210634928|ref|ZP_03298375.1| hypothetical protein COLSTE_02304 [Collinsella stercoris DSM 13279]
gi|210158557|gb|EEA89528.1| hypothetical protein COLSTE_02304 [Collinsella stercoris DSM 13279]
Length = 417
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/339 (10%), Positives = 107/339 (31%), Gaps = 33/339 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V ++ LL+ + + + S + + ++ + T+NG I + ++++I ++
Sbjct: 45 VLVAIGIAAMLLSVSAMACSGVLNEVQSKEDYKLTGGVAATVNGVNIKEDSVTEQIMSMR 104
Query: 65 LQK----------------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ + ++ + L Q + GI ++ + +
Sbjct: 105 QSAYESDKDWATYLSQQGMTPETYRENVIDSIVRQYLLVQAEKDYGIKVTQEDLDKAWKE 164
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
G + F + + G + + + + + + +I A
Sbjct: 165 AVEGNGGDEDAFVETISQFGFTKETYLENIKSSLAQQKL-REKVAGVKKPSDEDIVAYLN 223
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQ-----GFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ + +LF + ++ + + QK + + K K +
Sbjct: 224 ENLSTYNDARRSSHILFKVAEDATEEERAKVEAEAQKVLDKLNAGEIEFAKAAEKYSEDG 283
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLG--- 279
S + G + + ++Q+ L S + T G I + ++
Sbjct: 284 SAKNG---GDVGWDKLTTFVTEYQDALSGLSDGQMSGLVKTTYGYHIIKCTGQFNVQTVS 340
Query: 280 --GEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
E+ + ++ + T + +E++ + A I
Sbjct: 341 SIDEVPEGIRDAIAERIKTTAESEKYSEWLTEYTEKADI 379
>gi|325846702|ref|ZP_08169617.1| putative peptidylprolyl isomerase PrsA1 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481460|gb|EGC84501.1| putative peptidylprolyl isomerase PrsA1 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 345
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 103/276 (37%), Gaps = 25/276 (9%)
Query: 43 RTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ GE I+ ++ + +L+ VQ LI + L +++K+ + D
Sbjct: 51 VAVVGGEKISKESYKDEMSFYSAMLASQQQLKPSIVQMLIQDKLIADDMKKNDVKVDDKE 110
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+N F+Q+ + G E F L+ + + FK+ + I+ + F K +
Sbjct: 111 LNDKFLQYIQQFGGQ-EKFDKMLEDYNMSSDKFKETIKKDQIYQKH-REWFEKKNPVSDK 168
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+I + K+ + +L V+K++ D E D KL K
Sbjct: 169 DIKKYYDEHKDTLA-QVKASHILVE----DENTAKEVKKKLDDGE--------DFAKLAK 215
Query: 222 FASK--IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
SK + G Y + + +F + + ++P T G I + DK+D
Sbjct: 216 EYSKDTANSAKGGDLGYFTKDKMVKEFADKAFAMKKGEISDPVKTSYGYHIIKVEDKKDN 275
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
ALK +S K A+Y+ L + A +
Sbjct: 276 PD--ALKEEISKALNDKKY----ADYLTDLFNKANV 305
>gi|212696153|ref|ZP_03304281.1| hypothetical protein ANHYDRO_00689 [Anaerococcus hydrogenalis DSM
7454]
gi|212676782|gb|EEB36389.1| hypothetical protein ANHYDRO_00689 [Anaerococcus hydrogenalis DSM
7454]
Length = 345
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 105/276 (38%), Gaps = 25/276 (9%)
Query: 43 RTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ GE I+ ++ + +L+ VQ LI + L +++K+ + D
Sbjct: 51 VAVVGGEKISKESYKDEMSFYSAMLASQQQLKPSIVQMLIQDKLIADDMKKNDVKVDDKE 110
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+N F+Q+ + G E F L+ + + FK+ + I+ + F K +
Sbjct: 111 LNDKFLQYIQQFGGQ-EKFDKMLEDYNMSSDKFKETIKKDQIYQKH-REWFEKKNPVSDK 168
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+I + K+ T+ + +L V+K++ D E D KL K
Sbjct: 169 DIKKYYDEHKD-TLSQVKASHILVE----DENTAKEVKKKLDDGE--------DFAKLAK 215
Query: 222 FASK--IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
SK + G Y + + +F + + ++P T G I + DK+D
Sbjct: 216 EYSKDTANSAKGGDLGYFTKDKMVKEFADKAFAMKKGEISDPVKTSYGYHIIKVEDKKDN 275
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
ALK +S K A+Y+ L + A +
Sbjct: 276 PD--ALKEEISKALNDKKY----ADYLTDLFNKANV 305
>gi|187251884|ref|YP_001876366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Elusimicrobium
minutum Pei191]
gi|186972044|gb|ACC99029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Elusimicrobium
minutum Pei191]
Length = 390
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/334 (15%), Positives = 106/334 (31%), Gaps = 70/334 (20%)
Query: 47 NGEVITDGDISK---------RIALLKLQKING---ELEKIAVQELIVETLKKQEIEKSG 94
NG+ I D K A KL + G +LEK + ++I + L Q EK G
Sbjct: 33 NGKPILQSDFDKVAGAFEAQYTAAAPKLMEQPGVKLKLEKEVLDQMINDELLFQAAEKEG 92
Query: 95 ITFDSNTVNYFFVQH------ARNTGLSA-------EDFSSFLDKQGIGDNHFKQYLAIQ 141
+ + ++ Q A + + F + L K+GI F+ L Q
Sbjct: 93 VKAREDEIDEAVKQAKDALIPAADEKGKPISEKERTKQFDAALKKEGISQKQFRDKLKKQ 152
Query: 142 SIWPDVVKNDFMLKYGNLEM-------------------------------EIPANKQKM 170
+ V+ + K +E E+ A ++
Sbjct: 153 IMSRKYVETAIVTKVKPVEEADAKALYDQVKAVMKKDSKKTALIKPEEHKKEVEAIAMRL 212
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-- 228
+ ++ + I + P ++ ++ + + ++ D + + S +
Sbjct: 213 EQLSAPKVRIGHIFLEAPKAAGADKIKEKEALAKEIKKKIDGGMDFSTAVRQFSDDKNSQ 272
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ-----NNTTNPYVTQKGVEYIAICDK---RDLGG 280
+ G + + P + ++P T G I I +K ++
Sbjct: 273 STGGDMILIKGA---PNTPKEIDTKAFSLDVGKVSDPIKTDFGFHIIKIKEKSAAEEITY 329
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
E + +I+ E++K L S A I
Sbjct: 330 EKVAR-EFGQYIAAQRIQVAINEHIKDLNSKAEI 362
>gi|297587540|ref|ZP_06946184.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516]
gi|297574229|gb|EFH92949.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516]
Length = 321
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++ + LI E + + ++ I V + + G A+ F L K+ +
Sbjct: 69 QIQPKIIDMLINEKIANKLMKDKKIEVSDKEVQAEVDKLQKQLG-GADKFKEQLKKENMT 127
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K+ + Q + F + + EI K + T +Y +LFS D+
Sbjct: 128 EQALKEQIEKQLKNKKL-SQQFEKDFKPSDKEIKDEFDKNLD-TYTQYNADHILFSGKDD 185
Query: 191 KLQN--QGFVQKRIKDAEES--RLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHP 244
K +N ++ + + A ++ ++ K+ N++ K S+ + GK L S +
Sbjct: 186 KGKNLDDAKLKAKSELANKTYEEVKDGKNFNEVAKAKSEDPSAKQNSGKLGDFLSSTMVK 245
Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYI----------AICDKRDLGGEIALKAYLSAQNT 293
+F + LKK + P T+ G I + D + A+ + +
Sbjct: 246 EFSDALKKMKPGEVSKPVKTEFGYHIIKLNSKVTELDKMTDANKQNVKTAISNKIIQEKV 305
Query: 294 PTKIEKHEAE 303
+ EK + +
Sbjct: 306 QKEFEKQKKD 315
>gi|71891915|ref|YP_277645.1| peptidyl-prolyl cis-trans isomerase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|122070620|sp|Q493R5|SURA_BLOPB RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|71796021|gb|AAZ40772.1| peptidyl-prolyl cis-trans isomerase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 425
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 104/270 (38%), Gaps = 19/270 (7%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE--------K 74
+IF + + + +I +N +I D DI I +++ +NG +
Sbjct: 9 LIFTLKTNIVLGALKTVDKIVALVNHNIILDSDIRHNIYMIQDNILNGNDNILQDISHYQ 68
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ +LI++ L Q ++ I D +N ++ + F ++L G+ F
Sbjct: 69 KILDQLIIDNLIFQISDQQKINIDHTQLNQMINCILNLYDMTFDKFRAYLYDIGLNYEKF 128
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQ 193
+ + + + L EI +K I + +++ +R + FS+P
Sbjct: 129 YFQQYQHMLKKQICDHVMHDRAHILTNEINKIVKKSNIIDINKQFKLRHITFSLPIQPTP 188
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD------VSIGKAQYLLESDLHPQFQ 247
+Q RI+ ++ + N +++ + + + + +++ D+ F
Sbjct: 189 SQI---DRIEYFARLLIKKKEFNNNIKELIRTYSNKNIIQIIKVHETEWVSWKDIPIIFD 245
Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
L+ ++ + P ++ G+ + I D R
Sbjct: 246 KYLQTINKGDVIGPIISCDGIHIVEIQDIR 275
>gi|313888122|ref|ZP_07821796.1| putative foldase protein PrsA [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845812|gb|EFR33199.1| putative foldase protein PrsA [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 362
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 89/251 (35%), Gaps = 27/251 (10%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + A+ +L KQ+ EKS IT VN + G E F+ FL + G+
Sbjct: 77 LREQAITDLTTTEALKQDAEKSKITVSDEEVNKKLDEIKAQLG-GEEAFNKFLKENGLPK 135
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ + + Q + + + E E+ + K+ K
Sbjct: 136 EYVAENMKNQMLVGKYTQEKLK-ELEPTEEEVKKQYEDNKD---------------SYYK 179
Query: 192 LQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF- 246
+ + +K+A R ++ +D KL K SK + G + F
Sbjct: 180 AKASHILVDDLKEANVLRKKILKGEDFAKLAKENSKDTGSAQNGGSLGEFTSGQMVEAFD 239
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ + K + + P TQ G I + DK+ L + Q ++ EY+
Sbjct: 240 KEIAKMKVGDISEPITTQFGYHIIKLEDKKPLEFDAVKD-----QIKAQLQQEKFKEYID 294
Query: 307 KLRSNAIIHYY 317
K++ +A I Y
Sbjct: 295 KVKKDAKIKIY 305
>gi|223040718|ref|ZP_03610986.1| ferric receptor CfrA [Campylobacter rectus RM3267]
gi|222878002|gb|EEF13115.1| ferric receptor CfrA [Campylobacter rectus RM3267]
Length = 278
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 95/295 (32%), Gaps = 34/295 (11%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ + +S+ I I E IT ++ K A L+ + N A+ LI + L+
Sbjct: 11 FLSFCMANASQISNGIAVIIENEPITVNEVRKAAAQLQTNEAN------ALNLLIRDRLE 64
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+I+ I +N + A +G+SA D S + +G FK +A
Sbjct: 65 TAQIKNLKIEASDYELNQRLQKIASESGMSASDLRSAVLSKGGDYAQFKDDVAKTIKQEK 124
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ ++ F N+ Y + +V + E
Sbjct: 125 LYQSIFADAKINISENAARA-----------YFEQNRDLFAHFTDASVTRYVASSAQLLE 173
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
+R P + N L + PQ + + +++ T + T +
Sbjct: 174 VARHSSPMNTNHNVHM----------DVLDLKSEQIPPQLRTIFQQTPDGTFTQIFQTPE 223
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHY 316
G E + K+ + + + + + Y KLR+ A + Y
Sbjct: 224 GFEMFYVASKKGQT--MPEFDEVRDEAMNALYKLEQDRVIGEYFNKLRAKANVKY 276
>gi|281356754|ref|ZP_06243245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis
ATCC BAA-548]
gi|281316881|gb|EFB00904.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis
ATCC BAA-548]
Length = 314
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 98/294 (33%), Gaps = 22/294 (7%)
Query: 41 RIRTTINGEVITDGDI--SKRIALL---------KLQKINGELEKIAVQELIVETLKKQE 89
+ ++NGE I+ D+ + R +L + ++ + V +LI L +
Sbjct: 25 SVLASVNGEPISLWDVLPATRQQEYQAYAAYSGDRLYEAIRQIRRKTVDDLIDRKLLIAD 84
Query: 90 IEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ + A G + +F + G ++ + I ++
Sbjct: 85 YRDKPFEISNQEIEAELDNIAERMGYRARSEFIREAREAGSSLEKIRKNVEESLIVQLMI 144
Query: 149 KNDFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ EI K + E + +L PD K + K A +
Sbjct: 145 FRRIHVAENVTPKEIYEYYKAHSEEFVKPETIELGLLLLSPDRKDLEAVTAEISKKLAAD 204
Query: 208 SRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQK 265
P++ L + S D + G + L P+F + + P T
Sbjct: 205 -----PENFAALARQYSSGPDAENGGNLGLIERRRLRPEFAAAIPSPEKGKVCGPIRTGD 259
Query: 266 GVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
GV ++ + + K + + K EK EYVK+LR NAII Y+
Sbjct: 260 GVSFLKVLNHNPAERREFRKLTPEIRRRIEQDKREKIRDEYVKQLRQNAIIRYF 313
>gi|317401961|gb|EFV82563.1| parvulin-type peptidyl-prolyl cis-trans isomerase [Achromobacter
xylosoxidans C54]
Length = 258
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 53/299 (17%), Positives = 100/299 (33%), Gaps = 51/299 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQEL 80
++ +++ ++A + T+NG+ I + + + LL Q L + QE+
Sbjct: 5 VMLAAACVIAVPAFAQN---VATVNGKAIPQKSLDQFVKLLVSQGATDSPQLREQVKQEM 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + Q E GI V L +QGI
Sbjct: 62 INRQVFVQAAEAGGI-AKQADVQTEIE----------------LARQGILV--------- 95
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFV 198
+ D++ K+ + ++ A +K+K EY +R +L +
Sbjct: 96 -----RALMADYLAKHPVSDAKVTAEYEKIKKEQAGKMEYKVRHILVEDEKTANDLLAQL 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257
+ ++ + KD EK G + ++ P Q + + +
Sbjct: 151 KSNKGKFDDLAKKNSKDPGSAEK---------GGDLGWAPPTNYVQPFAQAVTQLKKGQL 201
Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P TQ G I + D R + E + Q ++ A+Y K+LR A I
Sbjct: 202 VDKPVQTQFGWHIIMVDDTRPV--EFPPLDQVRTQLEEMLRQQTLADYQKELREKAKIQ 258
>gi|90424494|ref|YP_532864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
gi|90106508|gb|ABD88545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
Length = 310
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 90/301 (29%), Gaps = 37/301 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQE 79
++ + A + + T+NG I + D+ ++ + E +
Sbjct: 28 VLLAATAGHTSGQSAPADPVIATVNGAPIHESDLQLADEMIGRNLPVQEKRERRDALLTL 87
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+I + Q + I D + +ARN GL + +Q + ++ ++
Sbjct: 88 VIDSMVLAQVAKDRKI-ADEADLQRR-ASYARNQGL-MNHLLEVVGQQAVTEDAVRK--- 141
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ +VV E +R ++F PD
Sbjct: 142 ---AYQEVV--------------------VKPATDQIELHLRHLVFKFPDANDAAAASAT 178
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNL-LKKSQNN 256
+ A +R+ +D + S+ G + ++ ++ ++
Sbjct: 179 EVKAKAAFARIDKGEDFAAVAADLSEDPATKARGGDFDWRTRPEMGKEYADVAFALKPGE 238
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ P T G I + ++R + + + V K RS A I
Sbjct: 239 VSAPIKTAFGWHIIKLEERRPRK--PVEFEKIRDRVAAMVANAARFDLVDKARSAATIER 296
Query: 317 Y 317
+
Sbjct: 297 F 297
>gi|169824179|ref|YP_001691790.1| putative peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC
29328]
gi|302380852|ref|ZP_07269315.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3]
gi|167830984|dbj|BAG07900.1| putative peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC
29328]
gi|302311347|gb|EFK93365.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 321
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 95/251 (37%), Gaps = 16/251 (6%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++ + LI E + + ++ I V + + G A+ F L K+ +
Sbjct: 69 QIKPKIIDMLINEKIANKLMKDKKIEVSDKEVQAEVDKLQKQLG-GADKFKEQLKKENMT 127
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K+ + Q + F + + EI K + T +Y +LFS D
Sbjct: 128 EQALKEQIEKQLKNKKL-SQQFEKDFKPSDKEIKDEFDKNID-TYTQYNADHILFSGKDA 185
Query: 191 KLQNQGFVQKRIKDAEESR----LRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHP 244
K +N + + K + ++ K+ N++ K S+ + GK L S +
Sbjct: 186 KGKNLDASKLKAKSELADKTYEEVKNGKNFNEVAKAKSEDPSAKQNSGKLGDFLSSTMVK 245
Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA------LKAYLSAQNTPTKI 297
+F + LKK + P T+ G I + K ++ +K +S + K+
Sbjct: 246 EFSDALKKMKPGEVSKPVKTEFGYHIIKLNSKVTELDKMTDANKQNIKTAISNKIIQEKV 305
Query: 298 EKHEAEYVKKL 308
+K + K L
Sbjct: 306 QKEFEKQKKDL 316
>gi|194289564|ref|YP_002005471.1| peptidylprolyl isomerase; exported protein [Cupriavidus taiwanensis
LMG 19424]
gi|193223399|emb|CAQ69404.1| putative Peptidylprolyl isomerase; putative exported protein
[Cupriavidus taiwanensis LMG 19424]
Length = 264
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 55/299 (18%), Positives = 92/299 (30%), Gaps = 46/299 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ F + +++ S ++ +NG+ I + K IA Q + EL A LI
Sbjct: 6 LSFSLAAVLAAGSLPAIAQNAAVVNGKAIPSAKLDKLIAGTG-QPDSPELRTRARNMLID 64
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L QE K G+T V Q AR L+ F ++ G D ++
Sbjct: 65 RELLVQEANKRGLTQRD-DVQEQLEQ-ARLNVLAGAVFEDYVKTHGASDAELRKQY---- 118
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+K K + +EY R +L + + + + K
Sbjct: 119 -----------------------DKIKSQFGNGKEYHARHILV---EKEADAKAIIAKIK 152
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NP 260
A + K + G + S P+F + + T P
Sbjct: 153 GGA-----KFEDQAKAASKDPGSA--ANGGDLDWANSSSYVPEFSAAMTGLKKGQMTDTP 205
Query: 261 YVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAIIH 315
TQ G I + D RD E ++ + +K L+ A I
Sbjct: 206 VKTQFGWHIIELVDVRDAKIPSFEEVKPQLTQMLMGDQNWQREQFQAMMKSLKDKARIQ 264
>gi|217978662|ref|YP_002362809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella
silvestris BL2]
gi|217504038|gb|ACK51447.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocella
silvestris BL2]
Length = 322
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 49/279 (17%)
Query: 42 IRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ T+NG+ IT+ D+ L Q + V LI L Q+ + +
Sbjct: 56 VLATVNGQEITENDLAIAKDDLAGSLPQQLQGKARDTYVVDFLIDGALVSQKAKADKLDA 115
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+F+ L + + L ++++ V K +
Sbjct: 116 TP-------------------EFAKKLAY-------YHEKLLMETLLGQVAKAALTDEAI 149
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ QK + E R +L + + +A RL+ ++
Sbjct: 150 KKTYDDALKAQKPE----TEVHARHILVATDAD------------AEAVLKRLKAGEEFA 193
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
K+ K SK G + + + P+F K + P + G I + KR
Sbjct: 194 KVAKEVSKDTSADGGDLGWFTKDKMVPEFAEAAFKLEPGQLSAPVKSPFGWHIILVEGKR 253
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + Q + ++K + E V LR +A I
Sbjct: 254 EKP--FPALDEVKDQVSRYVVQKAQGELVAGLRKDAKIE 290
>gi|303234820|ref|ZP_07321445.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4]
gi|302493938|gb|EFL53719.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4]
Length = 321
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 95/251 (37%), Gaps = 16/251 (6%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+++ + LI E + + ++ I V + + G A+ F L K+ +
Sbjct: 69 QIKPKIIDMLINEKIANKLMKDKKIEVSDKEVQAEVDKLQKQLG-GADKFKEQLKKENMT 127
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K+ + Q + F + + EI K + T +Y +LFS D
Sbjct: 128 EQALKEQIEKQLKNKKL-SQQFEKDFKPSDKEIKDEFDKNID-TYTQYNADHILFSGKDA 185
Query: 191 KLQNQGFVQKRIKDAEESR----LRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHP 244
K +N + + K + ++ K+ N++ K S+ + GK L S +
Sbjct: 186 KGKNLDASKLKAKSELADKTYEEVKDGKNFNEVAKAKSEDPSAKQNSGKLGDFLSSTMVK 245
Query: 245 QFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA------LKAYLSAQNTPTKI 297
+F + LKK + P T+ G I + K ++ +K +S + K+
Sbjct: 246 EFSDALKKMKPGEVSKPVKTEFGYHIIKLNSKVTELDKMTDANKQNIKTAISNKIIQEKV 305
Query: 298 EKHEAEYVKKL 308
+K + K L
Sbjct: 306 QKEFEKQKKDL 316
>gi|300871204|ref|YP_003786077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira
pilosicoli 95/1000]
gi|300688905|gb|ADK31576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira
pilosicoli 95/1000]
Length = 295
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 93/297 (31%), Gaps = 20/297 (6%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSG 94
M + I + IT D R + L LQ + + ++L+ E + ++++
Sbjct: 1 MVNSIVGVVGSIPITYEDFVSRKSFLSLQARSIGKKINDDMVYKDLVEERIMYLKLKEYN 60
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ N V+ A L+ + F+ L +GI + ++ + Q ++ +
Sbjct: 61 YVIEENDVSRRLENIANQYNLTLDQFAKQLKAEGISYDEYRNSIKKQIAMENL-SGLVVN 119
Query: 155 KYGNLEMEIPANKQKMKNITVREY--LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ E K+ T E L++ +G Q+ R
Sbjct: 120 NTEITDAEADEYYNNSKDKTAFEVDTLVKLSWIFFKATTFTEKGEKQELADKVRGMAARG 179
Query: 213 PKDCNKLEKFASKIHDVS-IGKAQYLLESD-----LHPQFQNLLKKSQ-----NNTTNPY 261
+K++ + G Y L D L Q L ++ ++
Sbjct: 180 NDFAELAKKYSDDEKTKNYGGDLGYNLLYDAGKRSLPAQVNAGLTLAKRGYKVGTVSSVR 239
Query: 262 V-TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KG + I + + I + + + ++ +++ I Y
Sbjct: 240 ELVGKGFYIVKIVEIQKDMDSI--RTRVKNYLSEIRMRDSFVKWLDDETKRVTIKLY 294
>gi|152991383|ref|YP_001357105.1| hypothetical protein NIS_1642 [Nitratiruptor sp. SB155-2]
gi|151423244|dbj|BAF70748.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 279
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 55/279 (19%), Positives = 100/279 (35%), Gaps = 30/279 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
I +N E IT +I+ K+ G + A+Q LI E L+ ++I+K G+T D
Sbjct: 21 DGIAVIVNDEPITLYEIN------KVINTTGLSRREAIQLLIREKLENEQIKKLGVTVDD 74
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
++ + A+ G + QG FK+ L Q + +
Sbjct: 75 IELDQALEKIAKQKGTDLFGLQEAIISQGGDWEKFKEGLRKQLLRKKLYAALTR------ 128
Query: 160 EMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
QK+ ++EY F I + + A+ ++ L + N
Sbjct: 129 -----QQTQKLSEKDLKEYYETHKNEFEIAKEADIVKYISPSKEVLAKIAQNPLYQPSNN 183
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK-- 275
+ + + ++PQF LL ++ + T I I K
Sbjct: 184 ALLQKGE---------EKIDLQKVNPQFAYLLNQTPEGSFTKILPMGDKYLLIYIKHKYG 234
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ K Y+ + + T K+ EY KL+++A I
Sbjct: 235 KEYIPFEEAKGYILNRLSKTSGVKNVKEYFDKLKASANI 273
>gi|330883238|gb|EGH17387.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 192
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 63/157 (40%), Gaps = 7/157 (4%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + + E +R +L + + + + KR+ + R++ +D +L K
Sbjct: 28 LEKRGGQGQAQMRDEVHVRHILIKPSEIRNEEE---TKRLAEKIYDRIQNGEDFAELAKS 84
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
S+ + G ++ + L P+F+ ++ ++ + P+ T G + + +R
Sbjct: 85 FSEDPGSALNGGDLNWVDPNSLVPEFRQVMNETPQGELSKPFKTAYGWHVLEVLGRRSTD 144
Query: 280 G-EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A + K ++ +++++R A +
Sbjct: 145 ATDQAREQQALNVLRNRKYDEELQTWLRQIRDEAYVE 181
>gi|308445916|ref|XP_003087049.1| hypothetical protein CRE_13891 [Caenorhabditis remanei]
gi|308264485|gb|EFP08438.1| hypothetical protein CRE_13891 [Caenorhabditis remanei]
Length = 438
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 99/279 (35%), Gaps = 22/279 (7%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKIN 69
F KL + ++ V A +I + I D+ + +A +LQ
Sbjct: 6 FKKLFKASTLALLISTSVSVYA---APQDQIIAIVGSTAILKSDLDQGVAEATHRLQAQK 62
Query: 70 GE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSS 122
E L++ + +LI + ++++K G+ D ++N ++ A+ +G S E F
Sbjct: 63 KEIPPQNILQQQVLSQLITHDAQLEQVKKYGLKADEKSLNEAVLKVAQQSGENSLEAFQK 122
Query: 123 FLDKQGIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
LD + + + +A + + + M + ++++ + +
Sbjct: 123 KLDA--VAPGTYELLRNRVAEDLLIQRLSQQQVMSRIKITDLDVENFLKSPEGQAAVGSQ 180
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLL 238
+ + I ++ I A + L+ D +EK S V +
Sbjct: 181 VHVLHMRISGEAPASELES---IAKAVRTDLKDSNDVKSIEKKFSTAQVKVDGADMGFRP 237
Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
SD+ + TT+ + GV + + +K+
Sbjct: 238 LSDIPTDLAARVTTLEPGQTTDLIPAKDGVHVLKLLEKK 276
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 9/167 (5%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
K G +++ K + V ++ R +L + K+ D+ +RL+
Sbjct: 263 AKDGVHVLKLLEKKSNEQKALVPQFNTRHILIKTSEVVSPENA---KQTIDSIYNRLKAG 319
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
D L S + G ++ + P+F L++ S N + P+ TQ G +
Sbjct: 320 DDFATLASTYSNDPGSARDGGSLGWVSPGMMVPEFDKLMQSSPVNEISKPFQTQFGWHIL 379
Query: 271 AICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ R D+ E + + E ++++LR+N I
Sbjct: 380 QVTGTRQQDMTSEYQKRMARQI-LGERQFESEYDGWLRELRANTYIE 425
>gi|296445011|ref|ZP_06886972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus
trichosporium OB3b]
gi|296257432|gb|EFH04498.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus
trichosporium OB3b]
Length = 294
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 49/307 (15%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK----LQKIN 69
K L ++ + +++ + +++ +NG I+D D+ + L Q
Sbjct: 7 KRLRGRGAVVALGVSVLLTAVALPAQAKVLAKVNGVEISDDDVKTALDDLGSGLPRQLEG 66
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E + LI E L Q+ ++ + + F+ L
Sbjct: 67 KARENYVLDFLIDEQLVVQKAQRDKLGESPD-------------------FAKKLAY--- 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ ++S+ + K+ + A QK + E +L +P
Sbjct: 105 ----LRDKALMESLLGKIAKDAVTEDAIKKTYDEAAKNQKPE----TEVHAHHIL--VPT 154
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
R++ +D K+ SK G + + + P+F
Sbjct: 155 EDEAKAALK----------RVKGGEDFGKVADEVSKDPGARGGDLGWFTKDRMVPEFAEA 204
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
K ++P TQ G I + +KR + Q + +K +++ + +L
Sbjct: 205 AYKLEPGQISDPVKTQFGWHVIKLDEKRPKV--FPPLDQVREQVSRYVAQKAQSDLIVQL 262
Query: 309 RSNAIIH 315
R A I
Sbjct: 263 REGAKIE 269
>gi|255524040|ref|ZP_05391002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
carboxidivorans P7]
gi|296186897|ref|ZP_06855298.1| PPIC-type PPIASE domain protein [Clostridium carboxidivorans P7]
gi|255512327|gb|EET88605.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
carboxidivorans P7]
gi|296048611|gb|EFG88044.1| PPIC-type PPIASE domain protein [Clostridium carboxidivorans P7]
Length = 341
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 50/338 (14%), Positives = 114/338 (33%), Gaps = 44/338 (13%)
Query: 13 IKLLTTYFVLIIFCIVP----IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65
+K L + ++ F +++ A+ + + T+NGE IT G++ L+ +
Sbjct: 4 VKKLVSAVLISAFAFSTVGCNMIAKTPEAIKNSVVATVNGEKITRGELDSNPNLMGVVAQ 63
Query: 66 ---------------QKINGELEKIAVQELIVETLKKQEIEKSGITFDS----NTVNYFF 106
+ I E + + +I + +Q+ ++ + D V+
Sbjct: 64 IKQQYGEDYEKNDDAKSILKEQKAQVLDTMIEAKVIEQKAKELKVLPDDAKLKAEVDKQI 123
Query: 107 VQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ G A F + L +Q + + K Q N+ +
Sbjct: 124 SNIKQQQFGNDATKFQAALKQQNLTEETLKNMYYTQM--------KNQETVTNVTNNVGK 175
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE----- 220
+ + Y F+ +++ + K +A++ + RL K + +
Sbjct: 176 DVKVDDKSIQDYYKNNPYKFTEKPDRIHTAHILVKTEDEAKKVKARLDKGEDFAKVAKEV 235
Query: 221 --KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
A+K +G Y+ + + + P +Q G I +K +
Sbjct: 236 STDTATKDKGGDLGFVNYVDSGFDAAFMAGAIALKKGAVSAPVKSQFGYHIIKCIEKEEY 295
Query: 279 GGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ A+KA + Q + +K + V + + +A I
Sbjct: 296 PVKKIDAVKAQIKTQLETEQKQKKYQDKVAEWKKSAKI 333
>gi|262370367|ref|ZP_06063693.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046]
gi|262314709|gb|EEY95750.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046]
Length = 439
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 96/277 (34%), Gaps = 22/277 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGE- 71
K +F + + ++ +S + ++ VI D+ + LK Q + +
Sbjct: 9 KQFKQFFKASALALALATAIPTFVHASDEVVAVVDNSVILKSDLEASMTELKHQLESQKK 68
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSF 123
L + A+++LI+ + +++++ I D ++N + A+ +G S E F
Sbjct: 69 QVPPEQYLAQQALEQLIIRQTQLEQVKRYNIQPDEKSLNEAVLNVAKQSGSTSLEAFQQK 128
Query: 124 LDK-QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLI 180
LDK + +A + + + + ++ + + +
Sbjct: 129 LDKMAPGTYASLRSRVAEDLAINRLRQQIVTSRIQISDQDVKNFLNTPQGQAALGNQVHV 188
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
V DN V+ + + + +KF++ V + S
Sbjct: 189 LHVR-VSGDNADTVAKQVKTVLANDNDVA-------AIAKKFSTAGTKVEGADMGFRALS 240
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
D+ + + Q T+ + GV + + +++
Sbjct: 241 DIPSELAARVSPLQVGQITDLITVRDGVHLLKLVERK 277
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 64/168 (38%), Gaps = 11/168 (6%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ K + V +Y R +L + K++ ++ +R++
Sbjct: 264 VRDGVHLLKLVERKGAEQKAIVPQYKARHILIQPSEVVSPENA---KQMIESLYNRVQKG 320
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + PQF+ +K + T+ P+ TQ G +
Sbjct: 321 EDFAVLASTYSNDTGSARDGGSLGWVSPGVMVPQFEETMKNTPVGQTSKPFQTQFGWHIL 380
Query: 271 AICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + R ++ + + + ++++ R+ A +
Sbjct: 381 QVTETRQQ--DMTAEYQERMARQILGERQFDAELDSWLRETRNRAFVE 426
>gi|109947398|ref|YP_664626.1| hypothetical protein Hac_0844 [Helicobacter acinonychis str.
Sheeba]
gi|109714619|emb|CAJ99627.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 404
Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG IT I + K+ K A LI + +K QEIE+ I D +
Sbjct: 151 GISLLVNGSPITLYQIQEEQEKFKVSKN------QARDRLIADRIKNQEIERLKIHIDDD 204
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ A+ G+ + F + +G ++ L ++++N +
Sbjct: 205 RLDQEMAMMAQQQGMDLDHFKQMIMAEG-HYKTYRDQLKEHLEMQELLRNILLTNVDTSS 263
Query: 161 M 161
Sbjct: 264 E 264
>gi|68304918|gb|AAY89929.1| predicted survival protein surA [uncultured bacterium BAC13K9BAC]
Length = 441
Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 82/189 (43%), Gaps = 13/189 (6%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
KV+ + + + F++I+F + +S + AM +I +N V+ +++ ++ +
Sbjct: 25 KVYQVIKTGLNMNNVKFLIILFFLT--ISNMAHAMEDKIIAVVNDNVVLKSELNNKLTTI 82
Query: 64 KLQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
L+ + +L++ + +LI E+L +Q + GI + A++ L+
Sbjct: 83 NLEGTSRLEAAKLKREILDQLIEESLLEQAANRLGIYISDIDLQNRIKLIAQDKNLTVLQ 142
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN------- 172
++ Q I + + L + ++ + F + E EI + + +
Sbjct: 143 LKEAVESQNIDYLRYLKNLRKRIQIEELFRIQFTSRAYVSEEEIQSYLKTNDSLKIINNI 202
Query: 173 ITVREYLIR 181
+TVREYLI
Sbjct: 203 MTVREYLIE 211
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 63/145 (43%), Gaps = 7/145 (4%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGK 233
EY + +L N ++N +++R + + + +K++ K + G
Sbjct: 297 SEEYKVSHILLKT--NPMENLKSLKERFYKIKRDATKENNFSDYAQKYSLDKASAIKGGS 354
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSA 290
++ + + P+F ++ + + P+ TQ G + + DKR ++ ++A ++
Sbjct: 355 LGWINKKLVVPEFGRIMSNMKIGGISEPFKTQFGWHILQLEDKRIKNISNDVARNQVVAI 414
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
K++ + E++ KL+ A I
Sbjct: 415 -LKERKVKVAKREWLAKLKDQAYIE 438
>gi|34556608|ref|NP_906423.1| hypothetical protein WS0160 [Wolinella succinogenes DSM 1740]
gi|34482322|emb|CAE09323.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 279
Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/304 (20%), Positives = 123/304 (40%), Gaps = 35/304 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+L+ F+ + C +++ + + + I +N + +T ++ K L + K +
Sbjct: 1 MLSRIFLSLGLCASMVLA--APTLVNGISFYVNNQPVTLLELYKTAQLANVSK------E 52
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A++ LI + L + EIE+ GI+ + VN + A++ G + E F SFLD++G+ +
Sbjct: 53 RAMEMLIDKMLHQDEIERYGISTNEIEVNQEVERIAKSNGATLEQFRSFLDQKGVNWESY 112
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
K+ L + + + + V Y LFSIP
Sbjct: 113 KEDLKEKVLKDKLYDKIVANNLRMADERE----------LVAYYESNKNLFSIP--ARIE 160
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
+ ++A S L+ P K I + + +L ++P+ LL+++
Sbjct: 161 TIKYSSKNQEALVSLLKNPLSQPK----------GLISEPETILTQKINPKLAALLQETP 210
Query: 255 -NNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
T + + + K D + E A +A + K +K E+ +KLR+
Sbjct: 211 LGQFTQIFTIGEDHLTFLVKSKGDLVLIPFESAKEAVFH-RLMMEKEDKVIREHFEKLRA 269
Query: 311 NAII 314
+A +
Sbjct: 270 SAKV 273
>gi|169343240|ref|ZP_02864251.1| putative foldase protein PrsA [Clostridium perfringens C str.
JGS1495]
gi|169298538|gb|EDS80619.1| putative foldase protein PrsA [Clostridium perfringens C str.
JGS1495]
Length = 326
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 101/304 (33%), Gaps = 31/304 (10%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE-------------- 71
+V A+ T+NGE IT G++ + +++ G+
Sbjct: 7 CNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQILQ 66
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ VQ L+ + + E +K GI V+ F + G ++F L+ +
Sbjct: 67 QRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMG---DNFDKALEAE 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G ++ FK + Q I V++ + + + + K ++++ +
Sbjct: 124 GYTEDTFKDVIKNQVI-NQAVQDYIIKDVKVTDEDAQKYYDENK----QQFVAKDSGVLT 178
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQ 245
+N+ QK + + + K E S+ + + L +
Sbjct: 179 KHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYENNKSENKKPIAENLGVVPAENSGLVQE 238
Query: 246 FQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F + LK + + TQ G I + G ++ S K +K ++
Sbjct: 239 FVDGLKPLKEGEISKLIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKF 298
Query: 305 VKKL 308
+
Sbjct: 299 KADM 302
>gi|326336412|ref|ZP_08202582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325691285|gb|EGD33254.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 461
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/315 (12%), Positives = 97/315 (30%), Gaps = 24/315 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I L T F+ CI + + S + + +I + DI + AL++L+ N +
Sbjct: 14 INYLGTLFLSFFLCIPCLWAQSSKTKIDGVAAVVGDYLILETDIDR--ALIELRSQNVDT 71
Query: 73 ----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD--- 125
+ +L+ + L + + I + + +
Sbjct: 72 KNVTRCQLLGKLMEDKLYVNQAIQDSIKVSDTDIRDGVNR---RIEFLTDQLGDIQKVIQ 128
Query: 126 -KQGIGDNHFKQY---LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN----ITVRE 177
+ + + Q+ +K + E+ K+ E
Sbjct: 129 FYHKDDEQSLRDELFDILRQNELSSRMKAKIVENIEVTPEEVKQFFNKIPKDELPTIGTE 188
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
I ++ P V +++K+ ++ S + +
Sbjct: 189 LEIAQIVIE-PKAPQSEVNKVIEQLKEIKKDVQENGASFPTKAILYSADRATGGKELTFN 247
Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+S +F+++ + ++P+ T G + + R G E++++ L P
Sbjct: 248 RKSSFAKEFKDVAFSLQEGEISDPFKTDFGWHILQVVKIR--GKEVSVRHILMVPQIPQN 305
Query: 297 IEKHEAEYVKKLRSN 311
+ + + +R+
Sbjct: 306 SLEEAKKKINDIRNK 320
>gi|332665906|ref|YP_004448694.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter
hydrossis DSM 1100]
gi|332334720|gb|AEE51821.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter
hydrossis DSM 1100]
Length = 455
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 91/278 (32%), Gaps = 24/278 (8%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
Y + + + + + ++ TI GE+ ++ ++ A K Q+ NG + A
Sbjct: 1 MRYLIFAVLLTTTMAATAQRQILDKMVATIGGEITLLSEVEEQYAYTKAQR-NGAVPPEA 59
Query: 77 VQELIVETLKKQ----EIEKSGITFDSNTVNYF----FVQHARNTGLSAEDFSSFLDKQ- 127
L+ + L + + + I V + + F + +
Sbjct: 60 RCMLVEQILVNKLLLNQAKLDSIEVKDEEVESQLTARIERILSYMNDDLKQFEEYYGQTV 119
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTV 183
F++ L + ++ M E+ +++ + E + +
Sbjct: 120 NEVREQFREDLRNNLLIER-MRAKIMADVSVTPSEVKDFFRRIPKDSLPYFSSEVEVGEI 178
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD----VSIGKAQYLLE 239
++ +P NK Q + ++K E+ R R+ + + A K D G +
Sbjct: 179 VYKVPINKEQKRVTMEK----LEDIRKRIVEGKEDFAELAKKYSDDGSARGGGDLGWAKR 234
Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+F K + + TQ G + + +R
Sbjct: 235 GKYVTEFEAAAYKLEEMEVSPVIETQFGFHVLQMLGRR 272
>gi|293603952|ref|ZP_06686366.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
gi|292817645|gb|EFF76712.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
Length = 258
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 101/299 (33%), Gaps = 51/299 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQEL 80
++ +++ ++A + T+NG+ I ++ + + LL Q L + QE+
Sbjct: 5 VMLAAACVIAVPAFAQN---VATVNGKAIPQKNLDQFVKLLVSQGATDSPQLREQVKQEM 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + Q E SGI V L +QGI
Sbjct: 62 INRQIFVQAAESSGI-AKQADVQTEIE----------------LARQGILV--------- 95
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFV 198
+ D++ K + ++ A +K+K EY +R +L +
Sbjct: 96 -----RALMADYLAKNPVSDAKVTAEYEKIKKEQAGKMEYKVRHILVEDEKTANDLLAQI 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNT 257
+ ++ + KD EK G + ++ P Q + + +
Sbjct: 151 KSNKSKFDDLAKKNSKDPGSAEK---------GGDLGWAPPTNYVQPFAQAVTQLKKGQL 201
Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P TQ G I + D R + E + Q ++ A+Y K+LR A I
Sbjct: 202 VDKPVQTQFGWHIIMVDDTRPV--EFPPLDQVRPQLEEMLRQQTLADYQKQLRDKAKIQ 258
>gi|261414929|ref|YP_003248612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371385|gb|ACX74130.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327509|gb|ADL26710.1| peptidyl-prolyl cis-trans isomerase SurA [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 427
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 96/298 (32%), Gaps = 26/298 (8%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-ALLKLQKINGELEKI---- 75
+ + + + + + I ++G+ I + + + E+
Sbjct: 6 IASLVFALSVGCFAEPVLMEGIAAVVDGKPIMRSEFMNNLYRFQDTPEAASMTEQQQKEA 65
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNY----FFVQHARNTGLSAEDFSSFLDKQ-GIG 130
+ +I E + I++ I N V+ A + + + Q G+
Sbjct: 66 VLNRMIEEKVLLSRIDRDSIVISENEVDQRVTSHLQSIAASQKIDMATLEKAVRAQLGLS 125
Query: 131 DNHFKQ----YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY---LIRTV 183
+++ + V+ + + E+ + K+ R++ L+ +
Sbjct: 126 MIQYREQLGKQIRSHMEISR-VRQLHVGTIHPTKKEVDVFYKDYKDSLPRQFNCVLLSHI 184
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDL 242
I + + K + +A L L L + S+ G Y L
Sbjct: 185 QLPIKPDSMIVDSV--KHVAEALIDSLNLGIKFELLAQRHSQDSTAAKGGDLGYFKRGLL 242
Query: 243 HPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIA---LKAYLSAQNTPT 295
P F+ +++ +N + P T G + +++ G A L+ +A+++
Sbjct: 243 DPAFEKAIERLKNGHYASTPVKTDLGWHIARVLGRKEDGVRSAQILLRTIPTAKDSAA 300
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 49/151 (32%), Gaps = 16/151 (10%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+K + + L+RT+ + D+ + ++ + K K S+
Sbjct: 276 GRKEDGVRSAQILLRTI-------PTAKDSAAVLALADSLRNNIKSKDEFAKAAKKFSED 328
Query: 227 HDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G + +++ P + + + + P + + D R +
Sbjct: 329 KSSNFQGGLLGWFQRNEMEPAYVDPVANLNVGEISEPVMIDGAYHLFRLDDSRQVRELTL 388
Query: 284 LKAYLSAQNT------PTKIEKHEAEYVKKL 308
+ Y + K++K ++ K++
Sbjct: 389 EEDYGKIELMAATHLENEKLQKLIQKWRKEV 419
>gi|92116105|ref|YP_575834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter
hamburgensis X14]
gi|91798999|gb|ABE61374.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter
hamburgensis X14]
Length = 308
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/322 (17%), Positives = 99/322 (30%), Gaps = 52/322 (16%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKR 59
MT+ + + L + + +V A + + +NG I D++
Sbjct: 1 MTTSLPATKHSLRVRLALSALGGCLALTLLVGTPVRADDLNPVLAKVNGSEIRQSDVNVA 60
Query: 60 IALLK---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGL 115
L Q ++ + LI + + E I + F + A L
Sbjct: 61 EEELGPGLAQMDPAAKQENVLSFLIDMKIIAKAAEDKKIENSED----FKKRLAFARDRL 116
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
+ + K I D K + A+KQ +
Sbjct: 117 LMDKLLASEGKAAITDEAMK------------------------TVYADASKQI---TSE 149
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKA 234
E R +L + + + ++K D +L K SK S G
Sbjct: 150 EEVHARHILVPTEEEAKKVEDELKK------------GADFAELAKKESKDPGASDGGDL 197
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ + + P+F + ++P TQ G I + +KR + +
Sbjct: 198 GFFTKEQMVPEFSKVAFALEPGKISDPVKTQFGWHIIKVEEKRARKAPAFDQVKPQIEQF 257
Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315
T+ K +A+YV KLR A I
Sbjct: 258 VTR--KAQADYVAKLRETAKIE 277
>gi|33594430|ref|NP_882074.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis
Tohama I]
gi|33597875|ref|NP_885518.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
parapertussis 12822]
gi|81713668|sp|Q7W5E0|PLP1_BORPA RecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans
isomerase; Short=PPIase; AltName: Full=Rotamase; Flags:
Precursor
gi|167016622|sp|P40415|PLP1_BORPE RecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans
isomerase; Short=PPIase; AltName: Full=Protein p13;
AltName: Full=Rotamase; Flags: Precursor
gi|33564505|emb|CAE43820.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis
Tohama I]
gi|33574304|emb|CAE38637.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
parapertussis]
gi|332383841|gb|AEE68688.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella pertussis
CS]
Length = 258
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 95/304 (31%), Gaps = 50/304 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LE 73
+ +L C++ + ++ T+NG+ IT + + + L+ Q L
Sbjct: 1 MKRIAMLAAACVIAVPAFAQN------VATVNGKPITQKSLDEFVKLVVSQGATDSPQLR 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ QE+I + Q EK G+ V AR L + +L K + D
Sbjct: 55 EQIKQEMINRQVFVQAAEKDGV-AKQADVQTEIE-LARQGILVRALMADYLQKHPVTDAQ 112
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K E E +Q K EY +R +L
Sbjct: 113 VKA-----------------------EYEKIKKEQAGK----MEYKVRHILVEDEKTAND 145
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
V+ ++ + KD E+ G + ++ F + K
Sbjct: 146 LLAQVKSNKNKFDDLAKKNSKDPGSAER---------GGDLGWAPATNYVQPFAEAVTKL 196
Query: 254 QNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P TQ G I + D R + E + Q ++ A Y K+LR
Sbjct: 197 KKGQLVDKPVQTQFGWHVIQVDDTRPV--EFPAMDQVRPQLEEMLRQQTLANYQKQLREQ 254
Query: 312 AIIH 315
A I
Sbjct: 255 AKIQ 258
>gi|256545179|ref|ZP_05472545.1| foldase protein PrsA 1 [Anaerococcus vaginalis ATCC 51170]
gi|256399220|gb|EEU12831.1| foldase protein PrsA 1 [Anaerococcus vaginalis ATCC 51170]
Length = 339
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 104/274 (37%), Gaps = 21/274 (7%)
Query: 43 RTTINGEVITDGDISKRIALLK-LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ GE IT ++ + +L+ VQ L+ + L +++K+ + D
Sbjct: 51 VALVGGEKITKDSYKDEMSFYSAMLASRQQLKPSIVQMLVQDKLIADDMKKNNVKVDDKA 110
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ F+Q+ + G E F L+ + + FK+ + I+ + F K E
Sbjct: 111 LDDKFLQYVQQFGGQ-EKFDKMLEDYNMSSDKFKETIKKDEIYQKH-RAWFEEKNPVDEK 168
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+I ++ K+ T+ + +L + K++K+ ++ K + K
Sbjct: 169 QIKKYYEENKD-TLSQVKASHILVA--------DEATAKQVKEKLDNGEDFAKLAKEYSK 219
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
+ G Y + + +F + ++ ++P T G I + DK+D
Sbjct: 220 --DTANAEKGGDLGYFTKDKMVKEFADKAFSMKKDEVSDPVKTSYGYHIIKVTDKKDSPE 277
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
ALK +S K +Y+ L + A +
Sbjct: 278 --ALKDEISKTLNDKKYS----DYLTDLFNKAKV 305
>gi|268680813|ref|YP_003305244.1| hypothetical protein Sdel_2197 [Sulfurospirillum deleyianum DSM
6946]
gi|268618844|gb|ACZ13209.1| conserved hypothetical protein [Sulfurospirillum deleyianum DSM
6946]
Length = 283
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 107/309 (34%), Gaps = 39/309 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKIN 69
+K+ + + S + I IN E IT D+ S+R L
Sbjct: 1 MKIKLKVLTFVTLGATLLFSPANAGTVDGISLIINKEPITLYDVFKYSQRFNL------- 53
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+K A+ L+ + L++ EI+K GI+ ++ V+ + A N ++ DF + + + +
Sbjct: 54 --SKKDALDILVRQKLEEAEIKKLGISVENYEVDQYIETLATNNNMNTTDFLAMIRSKNV 111
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+K+ L + + + + ++ E L + D
Sbjct: 112 DVFEYKEELTNKLKRDKLYR-------KIISNKLQQISDGELKAYYDENLHEFSQANGFD 164
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + I + K F + D ++ + F ++
Sbjct: 165 VTIYTSANQESLISLKKNPMSTFKDVELKEGSFQAGKMDANLATLLNKTATS---SFSSI 221
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYV 305
+K QN + +K + + K Y+ A+ + K +K EY
Sbjct: 222 VKSDQNYV-----------MFFVKNKHNAQTVAFDD--AKNYIHAKLSEGKEQKAIEEYF 268
Query: 306 KKLRSNAII 314
+KL+S+A I
Sbjct: 269 EKLKSSANI 277
>gi|126699161|ref|YP_001088058.1| putative peptidyl-prolyl isomerase [Clostridium difficile 630]
gi|255306527|ref|ZP_05350698.1| putative peptidyl-prolyl isomerase [Clostridium difficile ATCC
43255]
gi|115250598|emb|CAJ68422.1| putative peptidylprolyl isomerase [Clostridium difficile]
Length = 318
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 111/299 (37%), Gaps = 33/299 (11%)
Query: 44 TTINGEVITDGDISKRIALL----------------KLQKINGE--LEKIAVQELIVETL 85
+N IT K A+L K G LE + + ++ L
Sbjct: 25 AKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISFMVDNEL 84
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE + G+T + V+ + + L+ + +DK G+ ++ KQ ++
Sbjct: 85 LYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTS-YKEKMDKAGVDKDYLKQEISRDLAID 143
Query: 146 DVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIK 203
K F + + ++ A K+ V E +L ++ NK + ++ +K
Sbjct: 144 KNKKA-FEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALK 202
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
++ L K+ E A K D + G+ Y + D + +F + + K +N
Sbjct: 203 KKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEV 262
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+N + T G + + DKR+ ++ + K + ++KKL +A I
Sbjct: 263 SNVFETSYGYHIVKVTDKRERQKSFNECQSLIRESILNEKYIE----HIKKLNEDAKID 317
>gi|33602778|ref|NP_890338.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
bronchiseptica RB50]
gi|81713941|sp|Q7WCX5|PLP1_BORBR RecName: Full=Probable parvulin-type peptidyl-prolyl cis-trans
isomerase; Short=PPIase; AltName: Full=Rotamase; Flags:
Precursor
gi|33577220|emb|CAE35777.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella
bronchiseptica RB50]
Length = 258
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 94/297 (31%), Gaps = 47/297 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQEL 80
+ +++ ++A + T+NG+ IT + + + L+ Q L + QE+
Sbjct: 5 AMLAAACVIAVPAFAQN---VATVNGKPITQKSLDEFVKLVVSQGATDSPQLREQIKQEM 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + Q EK G+ V AR L + +L K + D K
Sbjct: 62 INRQVFVQAAEKDGV-AKQADVQTEIE-LARQGILVRALMADYLQKHPVTDAQVKA---- 115
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
E E +Q K EY +R +L V+
Sbjct: 116 -------------------EYEKIKKEQAGK----MEYKVRHILVEDEKTANDLLAQVKS 152
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TT 258
++ + KD E+ G + ++ F + K +
Sbjct: 153 NKSKFDDLAKKNSKDPGSAER---------GGDLGWAPATNYVQPFAEAVTKLKKGQLVD 203
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + D R + E + Q ++ A Y K+LR A I
Sbjct: 204 KPVQTQFGWHVIQVDDTRPV--EFPAMDQVRPQLEEMLRQQTLANYQKQLREQAKIQ 258
>gi|306520092|ref|ZP_07406439.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-32g58]
Length = 323
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 110/299 (36%), Gaps = 33/299 (11%)
Query: 44 TTINGEVITDGDISKRIALL----------------KLQKINGE--LEKIAVQELIVETL 85
+N IT K A+L K G LE + + ++ L
Sbjct: 30 AKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISFMVDNEL 89
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE + G+T + V+ + + L+ + +DK G+ + KQ ++
Sbjct: 90 LYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTS-YKEKMDKAGVDKEYLKQEISRDLAID 148
Query: 146 DVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIK 203
K F + + ++ A K+ V E +L ++ NK + ++ +K
Sbjct: 149 KNKKA-FEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALK 207
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
++ L K+ E A K D + G+ Y + D + +F + + K +N
Sbjct: 208 KKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEV 267
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+N + T G + + DKR+ ++ + K + ++KKL +A I
Sbjct: 268 SNVFETSYGYHIVKVTDKRERQKSFNECQSLIRESILNEKYIE----HIKKLNEDAKID 322
>gi|124004175|ref|ZP_01689021.1| chaperone SurA, putative [Microscilla marina ATCC 23134]
gi|123990245|gb|EAY29744.1| chaperone SurA, putative [Microscilla marina ATCC 23134]
Length = 460
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 98/285 (34%), Gaps = 28/285 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-----SRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ +Y +++ C+ S S A +I +N +I + D+ +R + Q
Sbjct: 10 IFKSYIKVLLLCLAIGFSSMSMAQGGGQLVDKIIAKVNNNIILESDLQQRYLEIISQSQT 69
Query: 70 GELEK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
EK ++E+I++ L + E + VN + S L+
Sbjct: 70 TAPEKDLKCKILEEMIIQKLLVAKAEIDSVIVSDIEVNLQLDRRIDYMLKSVGGEKQQLE 129
Query: 126 KQ-GIGDNHFKQYLA----IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VR 176
K G + K+ + Q + + E+ + +
Sbjct: 130 KLYGKTMDQIKEDIRDILKEQMTVSK-MNGEITSTVKITPKEVRQYFDSIPKDSLPYFSD 188
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASK--IHDVSIG 232
E + ++ IP+ + QK + E+ R RL +D +L + S+ + G
Sbjct: 189 EVEVGHIV-KIPE---PTKEQKQKIRQKLEKIRGRLMKGEDFAQLAQEFSQDYVSAKQGG 244
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ P+F + + +N + TQ G I + ++R
Sbjct: 245 NLGWQTRGVFVPKFEAAVFRLKKNEISKVIETQLGFHVIQLLERR 289
>gi|326798883|ref|YP_004316702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobacterium sp.
21]
gi|326549647|gb|ADZ78032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingobacterium sp.
21]
Length = 464
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 97/275 (35%), Gaps = 12/275 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKING 70
+K LI + + + ++ + G +I DI + A L + + +
Sbjct: 1 MKKFAGLLTLIFLACAGALRAQDVQVIDKVAAVVGGNIILQSDIEMQYAQYLSEGNRADP 60
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA---EDFSSFLDKQ 127
++ + +++L+ L Q+ I + V+ R A E FL++
Sbjct: 61 GVKCMILEQLLTNKLLTQQAAIDSIEVTEDEVDDNINNRLRYMTRQAGGQEQLEKFLNRS 120
Query: 128 GIGD-NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + + Q I ++ K G +E+ +K+ ++ Y +
Sbjct: 121 LLQYKEEMRPAVKEQLI-AQKMQAKITEKTGITPLEVKRYFEKIPKDSLPNYNTEVEVGE 179
Query: 187 IPDNKLQNQGFVQKRIKDAEESR--LRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDL 242
I + Q AE R ++ D + + S+ S G + S +
Sbjct: 180 IVVFPKLTKEEKQPFYDRAESLRMGIKAGDDFGTMARLYSQDPGSASSGGDLGFFDRSSM 239
Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+F ++ + +N + ++ G ++ + ++R
Sbjct: 240 VKEFTSVAFRLKPGEISNVFESEYGFHFLQVLERR 274
>gi|164688004|ref|ZP_02212032.1| hypothetical protein CLOBAR_01649 [Clostridium bartlettii DSM
16795]
gi|164602417|gb|EDQ95882.1| hypothetical protein CLOBAR_01649 [Clostridium bartlettii DSM
16795]
Length = 302
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 98/268 (36%), Gaps = 17/268 (6%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
+ + + ++++ + +I + Q+ +K I + VN + Q + ++
Sbjct: 42 AQFKESKDNDDKIKQEVISYMIDNEVVYQQAQKEKIKVTDDEVNQKYSQI-EKMLDTNQE 100
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA----NKQKMKNITV 175
+ LD G+ +++ K+ + + ++ + E+ +K K +V
Sbjct: 101 YKKLLDDAGVDEDYLKETIKKDLAVQKY-RENYEQDLKVTDKEVEKYYKEHKDDFKEESV 159
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-----KIHDVS 230
Y I ++ ++ DN ++ +K ES L+ K+ EK A K
Sbjct: 160 EAYHI--LVSTLDDNNKPVDDSKKEELKSKAESLLKEIKNGGDFEKIAKENSDDKSSGKK 217
Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G Y + + QF + K + +N + T G E + + +K+ E
Sbjct: 218 GGYLGYFTKDSKNAQFTKEAFKLEKGQVSNVFETPFGYEIVKVTNKKT---EQKSLEDSR 274
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + V LR + + +
Sbjct: 275 EEIVNRILADKYLDQVNSLREKSDVQRF 302
>gi|255100589|ref|ZP_05329566.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-63q42]
Length = 318
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 111/299 (37%), Gaps = 33/299 (11%)
Query: 44 TTINGEVITDGDISKRIALL----------------KLQKINGE--LEKIAVQELIVETL 85
+N IT K A+L K G LE + + ++ L
Sbjct: 25 AKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISFMVDNEL 84
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE + G+T + V+ + + L+ + +DK G+ ++ KQ ++
Sbjct: 85 LYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTS-YKEKMDKAGVDKDYLKQEISRDLAID 143
Query: 146 DVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIK 203
K F + + ++ A K+ V E +L ++ NK + ++ +K
Sbjct: 144 KNKKA-FEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALK 202
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
++ L K+ E A K D + G+ Y + D + +F + + K +N
Sbjct: 203 KKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEV 262
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+N + T G + + DKR+ ++ + K + ++KKL +A I
Sbjct: 263 SNVFETSYGYHIVKVTDKRERQKSFNECQSLIRESILNEKYIE----HIKKLNEDAKID 317
>gi|85859367|ref|YP_461569.1| peptidylprolyl isomerase [Syntrophus aciditrophicus SB]
gi|85722458|gb|ABC77401.1| peptidylprolyl isomerase [Syntrophus aciditrophicus SB]
Length = 364
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 97/271 (35%), Gaps = 18/271 (6%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--T 113
I KR+ KL ++ ++K + + +V+TL E+ + IT VN + +
Sbjct: 95 IRKRVPAEKLPQVKTNIQKRLIDDFVVKTLLNNEVNRLKITATEQEVNEAVEKLKSSLPA 154
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMK 171
+S E+ L K + ++ + + ++ + E EI + K + +
Sbjct: 155 NVSLENL---LKKNQMTREKMREEIRLGIQINKLMVSRTKNLPKPTEKEITSFYKKNQDR 211
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--- 228
+R +L I + + ++ AE R ++ + A D
Sbjct: 212 FKLPEAVHVRHIL--IARAPDDGEKVIAEKKAKAEGLRKKILAG-ADFAELAKSNSDCPS 268
Query: 229 -VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIA 283
+ G + + F++ + +N T+ G + + D R + +
Sbjct: 269 KSAGGDLGIVSRGQMVKPFEDAIFSLKKNQIGPVVQTEYGFHVVQVLDVRQPKTVALDER 328
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K +S+ K ++ + V L+ A I
Sbjct: 329 TKGMISSFLLQQKQQEAFRKMVASLKEKANI 359
>gi|254975115|ref|ZP_05271587.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-66c26]
gi|255092504|ref|ZP_05321982.1| putative peptidyl-prolyl isomerase [Clostridium difficile CIP
107932]
gi|255314242|ref|ZP_05355825.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-76w55]
gi|255516921|ref|ZP_05384597.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-97b34]
gi|255650024|ref|ZP_05396926.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-37x79]
Length = 318
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 110/299 (36%), Gaps = 33/299 (11%)
Query: 44 TTINGEVITDGDISKRIALL----------------KLQKINGE--LEKIAVQELIVETL 85
+N IT K A+L K G LE + + ++ L
Sbjct: 25 AKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISFMVDNEL 84
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE + G+T + V+ + + L+ + +DK G+ + KQ ++
Sbjct: 85 LYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTS-YKEKMDKAGVDKEYLKQEISRDLAID 143
Query: 146 DVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIK 203
K F + + ++ A K+ V E +L ++ NK + ++ +K
Sbjct: 144 KNKKA-FEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALK 202
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
++ L K+ E A K D + G+ Y + D + +F + + K +N
Sbjct: 203 KKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEV 262
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+N + T G + + DKR+ ++ + K + ++KKL +A I
Sbjct: 263 SNVFETSYGYHIVKVTDKRERQKSFNECQSLIRESILNEKYIE----HIKKLNEDAKID 317
>gi|222824289|ref|YP_002575863.1| hypothetical protein Cla_1294 [Campylobacter lari RM2100]
gi|222539510|gb|ACM64611.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 275
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 99/306 (32%), Gaps = 40/306 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + F + + + + + IT DI + + LK ++
Sbjct: 1 MRKFLISCCFAANVLYAQTLG----GVAMIVENQPITLYDIEQTMKELKT-----NDKQK 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A+ L+ + +++ E +K GI + +N Q A++ + ++K G+ FK
Sbjct: 52 AIAFLVDDKIQQSEAKKLGIYVSTFELNEKLDQIAKDNKTDINGLQARMEKDGLSFEVFK 111
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + ++ N++ E + + + + + + ++
Sbjct: 112 NKVRKNLEREKLYRSIMQNAKINIDDETLKHFYESNLDKFSTF----SNIDLVVYNSTNP 167
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLE----KFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + S+++ + + +++ IG +F +
Sbjct: 168 ELLQQLAQNPMYKNSQIKSKAISLNAASIDPRLLALLNNTKIG------------EFTPV 215
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
L + G K + ++ +A K + ++ K+R
Sbjct: 216 LNGENAYIVYFVKEKYG--------KNPIEFDLIKDQITNAYTINQKEQAL-KNHLDKIR 266
Query: 310 SNAIIH 315
+NA I
Sbjct: 267 ANAHIE 272
>gi|195952796|ref|YP_002121086.1| SurA domain [Hydrogenobaculum sp. Y04AAS1]
gi|195932408|gb|ACG57108.1| SurA domain [Hydrogenobaculum sp. Y04AAS1]
Length = 316
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
++ + +R+ +INGE I + D+ IA++ + K+A++ LI L Q
Sbjct: 52 LLHSTPGVLVNRVVASINGEPILESDLK--IAMVYFGTKDA---KLALKRLIDIYLIYQY 106
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----IWP 145
+ ++ + + ++ A L+ E L KQGI F+ +L + +
Sbjct: 107 LSENHMATPESFLDQTIKDLASQNNLTVEQLYEELKKQGISPKEFRDFLRKEILATAGFG 166
Query: 146 DVVKNDFMLKYGNLEM 161
+ ++ + ++E+
Sbjct: 167 EYLRKAVKITPSDIEL 182
>gi|218779881|ref|YP_002431199.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
gi|218761265|gb|ACL03731.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
Length = 327
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 95/301 (31%), Gaps = 19/301 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------GELEKIAVQELIVETL 85
A + +NG I I+ LL + L+K ++ +I +
Sbjct: 24 PIHGMAEPGEVLARVNGVNIYGWQITLAENLLFGSRNPHVHTESQTLKKEILKNVIDMEV 83
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
Q+ +K GI D V+ F + + S ++ S L + +
Sbjct: 84 LFQDAQKRGIEPDKRLVDGFVWNYKASFP-SLAEYQSALRGMNATEREIVDLAGRIVVMG 142
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + E E + N + R +R +L K + + R +
Sbjct: 143 ACIEERYGALLTPTEAEAQKYYDENPNDFVLPRALRVRHILIKKDAAKGVDGKTAKARAQ 202
Query: 204 DAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLE-----SDLHPQFQNLLKKSQNNT 257
+ + + + AS G Y+ E ++L P + +LK
Sbjct: 203 QILARVKKGGEPFAIIAREASDGPEKDQGGDMGYVSEGALKNTELEPLEKVILKLQPGEI 262
Query: 258 TNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
NP T G + D+R E + +SA K+ + + +L+ I
Sbjct: 263 GNPVETDIGFHIVKALDERPESITPFETVKERLISA-LQKKKMVEALNQLASELKPGFDI 321
Query: 315 H 315
Sbjct: 322 E 322
>gi|251778310|ref|ZP_04821230.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243082625|gb|EES48515.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 343
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 102/298 (34%), Gaps = 30/298 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK- 64
+ + + + ++ A+ + + T+ E IT GD+ + + +
Sbjct: 1 MNKIKKIVASVVVATLAFSIVGCKMIEKTPEAIKNTVLATVGKEKITQGDLDRDLKSITE 60
Query: 65 ---------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108
++ EL+ + ++ E + + + + +N +
Sbjct: 61 SLKQKYGENYESNADIKDQLKELKTQYLNAIVNEKVILAKSAELNLRPSDEELNKDVDEA 120
Query: 109 --HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-EIPA 165
+ + + E +++FL++ G ++ FK+Y Q +V+ + ++E+ +
Sbjct: 121 VSYYKTAYQTEEQYNTFLEQNGFTEDEFKEYQKNQ----AIVRYVYQDMVKDVEVNDEDI 176
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K +N + + F + Q + A+ + + K + K
Sbjct: 177 QKYYDENKDTQFSTPGEIDF--DKSLQQANEIKSQLDGGADFAEVAKEKSQDPGTK---- 230
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ S+G +Y + + + P +Q G I + +D G ++A
Sbjct: 231 GNGGSLGFIEYSSTKYVKEFMDGFKDLKEGEISQPIKSQFGYHIIKVTGVKDEGADVA 288
>gi|189345572|ref|YP_001942101.1| SurA domain [Chlorobium limicola DSM 245]
gi|189339719|gb|ACD89122.1| SurA domain [Chlorobium limicola DSM 245]
Length = 437
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 101/275 (36%), Gaps = 15/275 (5%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KIN 69
K++TT LI+ C+ I A++ RI I EV+ ++ +R+ + +Q K +
Sbjct: 3 KVMTTVCALILLCMPFISGTAVAAIADRIVAVIGNEVVLQSELDERVLMTHMQYPESKGD 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAEDFSSFLD 125
L + + LI + + + + D V A S E+ S
Sbjct: 63 KTLPEKVLNSLIDQKVILAKAKIDSTGIDDAALEGLVGERMKVLASRFS-SREEMESRFG 121
Query: 126 KQG-IGDNHFKQYLAIQSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
K + +Q + Q + + + + + E K + + E + +
Sbjct: 122 KSSLVIRRELRQEIKNQQLIESLRRKKLSGVTVTHEESMAFYEANKSRLPVIPEGVSVSQ 181
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
+ PD +++ + + + ++ L+ D L K S+ + G Y+ + +
Sbjct: 182 ILKYPDVTAESRSGAKA-MIEKVQAELKGGADFGALAKKYSQDPGSAQLGGDLGYVQKGE 240
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
L F+N + + T+ G I + +K
Sbjct: 241 LIQSFENAAYGLKEGQVSGVVETRYGFHLIQLLNK 275
>gi|330689731|pdb|3RGC|A Chain A, The Virulence Factor Peb4 And The Periplasmic Protein
Cj1289 Are Two Structurally Related Sura-Like Chaperones
In The Human Pathogen Campylobacter Jejuni
gi|330689732|pdb|3RGC|B Chain B, The Virulence Factor Peb4 And The Periplasmic Protein
Cj1289 Are Two Structurally Related Sura-Like Chaperones
In The Human Pathogen Campylobacter Jejuni
Length = 252
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 81/278 (29%), Gaps = 32/278 (11%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I ++ E IT DI + + LK+ + A+ LI E ++ ++++ GI +
Sbjct: 2 AIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLINEKMEISQMKQLGIVVNDL 55
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ + + F + L + F+ + + +
Sbjct: 56 ELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL------EKRKLYEKIASM 109
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K E F N + +++ + ++ + K N
Sbjct: 110 AKTDFSDDGAKKF--FEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKKTILKPQNASL 167
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK--RDL 278
+ L S + + + + G E + K
Sbjct: 168 NT----SNADPRLLG--LLSQIP----------VGSFSPVLNGKNGYELYEVKSKDGTQT 211
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+K + + + +Y KLRS I Y
Sbjct: 212 PEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEY 249
>gi|304440474|ref|ZP_07400362.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371040|gb|EFM24658.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 370
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/300 (20%), Positives = 112/300 (37%), Gaps = 26/300 (8%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD--ISKRIALLKLQKINGELEKIAVQEL 80
+ V V + N V+T G+ + +++ + G + + + L
Sbjct: 28 GVAATVNGVDIPVETFNEEYAAQRNSIVLTSGEDYLKEKLGKEDMTIDQG-IREFVLNNL 86
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ L +Q+ EK I D V+ +G S E F L +QGI + F+ YLA
Sbjct: 87 VQMELVRQDAEKKDIKVDEKKVDEQINAIIEQSG-SKEKFEEQLKEQGITEKFFRDYLAK 145
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q + + ++ + E + A +K K+ +L + + +
Sbjct: 146 QELVKEY-QDHLKEELKISEEDAKAIYEKDKD-KYFVADADHILV-------ETEDEAKS 196
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
K+ EE KD N+L K SK + GK + +F++ ++K +
Sbjct: 197 IKKEIEE-----GKDFNELAKEKSKDPTAKDNGGKLGEFSTGQMVKEFEDAVVKMKEGEI 251
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
++P TQ G I + R + + Q T + EY+ KL +A + Y
Sbjct: 252 SDPVKTQFGYHLIKLNSLRHKEFD-----EVKDQIIETGTSEKLTEYLNKLEKDAKVKKY 306
>gi|260683172|ref|YP_003214457.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196]
gi|260686770|ref|YP_003217903.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291]
gi|260209335|emb|CBA62746.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196]
gi|260212786|emb|CBE03939.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291]
Length = 310
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/299 (18%), Positives = 110/299 (36%), Gaps = 33/299 (11%)
Query: 44 TTINGEVITDGDISKRIALL----------------KLQKINGE--LEKIAVQELIVETL 85
+N IT K A+L K G LE + + ++ L
Sbjct: 17 AKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISFMVDNEL 76
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE + G+T + V+ + + L+ + +DK G+ + KQ ++
Sbjct: 77 LYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTS-YKEKMDKAGVDKEYLKQEISRDLAID 135
Query: 146 DVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIK 203
K F + + ++ A K+ V E +L ++ NK + ++ +K
Sbjct: 136 KNKKA-FEDRINISDNDMEAYYTSHKKDFNVEEVSASQILISTLDKNKKEVSKDKKEALK 194
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
++ L K+ E A K D + G+ Y + D + +F + + K +N
Sbjct: 195 KKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFTKDDKNAEFTKEVFKLKKNEV 254
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+N + T G + + DKR+ ++ + K + ++KKL +A I
Sbjct: 255 SNVFETSYGYHIVKVTDKRERQKSFNECQSLIRESILNEKYIE----HIKKLNEDAKID 309
>gi|309388299|gb|ADO76179.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halanaerobium
praevalens DSM 2228]
Length = 343
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/320 (17%), Positives = 114/320 (35%), Gaps = 50/320 (15%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISK----RIALLKLQKINGEL----------------- 72
I +N E I+ ++ + R L+++ + N E
Sbjct: 33 TVTEADQEIAAYVNSEEISMQELEQFAGVRNILMQILQTNQEFGSVMLQTEAGQQVVDEF 92
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDFSSFLDKQG 128
+K+ +++LI L QE + + +N F Q + LS E + + KQG
Sbjct: 93 QKLKLEQLITNKLMVQEAKSRKLKVSDEEMNKIFDQQIQALKQQNQLSEEQLEAAIQKQG 152
Query: 129 I-GDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRT 182
+K+ ++ ++ + + + K E E+ Q K + E +
Sbjct: 153 FESMKEYKELFFENNMNGFLINKLREEVVNKVKVSEEEVKDYYQNNKKQFESEAEKKVSH 212
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESD 241
+LF + + + ++ D + +K ++ G Y+ ++
Sbjct: 213 ILFD------------DQAKAEKVLAEIKAGADFAEMAKKHSTGPTADKGGNLGYVSANE 260
Query: 242 --LHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPT 295
L F++ +K TN P TQ G I + D R+ + +KA + +
Sbjct: 261 RGLDQTFRDAAMKLEVGEITNEPVKTQFGFHLIKVTDYREAGVRDFEEVKAQIESNLKNK 320
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
K + ++V+ LR A I
Sbjct: 321 KKSQAFQDFVENLREKAEID 340
>gi|188590380|ref|YP_001919599.1| peptidylprolyl isomerase [Clostridium botulinum E3 str. Alaska E43]
gi|188500661|gb|ACD53797.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
E3 str. Alaska E43]
Length = 343
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/342 (12%), Positives = 112/342 (32%), Gaps = 47/342 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK- 64
+ + + + ++ A+ + + T+ E IT GD+ + + +
Sbjct: 1 MNKIKKIVASVVVATLAFSIVGCKMIEKTPEAIKNTVLATVGKEKITQGDLDRDLKSITE 60
Query: 65 ---------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108
++ EL+ + ++ E + + + + +N +
Sbjct: 61 SLKQKYGENYESNADIKDQLKELKTQYLNAIVNEKVILAKSAELNLRPSDEELNKDVDEA 120
Query: 109 --HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM-EIPA 165
+ + + E +++FL++ G ++ FK+Y Q +V+ + ++E+ +
Sbjct: 121 VSYYKTAYQTEEQYNTFLEQNGFTEDEFKEYQKNQ----AIVRYVYQDMVKDVEVNDEDI 176
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K +N + + F + Q + A+ + + K + K
Sbjct: 177 QKYYDENKDTQFSTPGEIDF--DKSLQQANEIKSQLDGGADFAEVAKEKSQDPGTK---- 230
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-- 283
+ S+G +Y + + + P +Q G I + +D G ++A
Sbjct: 231 GNGGSLGFIEYSSTKYVKEFMDGFKDLKEGEISQPIKSQFGYHIIKVTGVKDDGADVAHI 290
Query: 284 ---------------LKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+K + Q K E +++ +
Sbjct: 291 LVADKGEGTVTPLEDVKEDIRGQLLQKKQSDVFNEKIEEWKK 332
>gi|95930211|ref|ZP_01312949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas
acetoxidans DSM 684]
gi|95133674|gb|EAT15335.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas
acetoxidans DSM 684]
Length = 292
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 95/290 (32%), Gaps = 23/290 (7%)
Query: 44 TTINGEVITDGDISKRIAL--LKLQKINGE---------LEKIAVQELIVETLKKQEIEK 92
T+NG I+ D + ++L + + ++ +AV+++I L Q
Sbjct: 6 ITVNGTPISQFDFVNAMQSYSMELYRKTADQLSEEEIEQVQGLAVEQIIARELIFQTALA 65
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G + + N S E+F + L+K GI + + + L + +
Sbjct: 66 QGAIATDEQIKAEMDKVMANFP-SEEEFFATLEKAGIDQDSYYRMLRQDLSVKMMTEKKL 124
Query: 153 MLKYGNLEMEIPA----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
E+ A N KMK + +L + ++ + +K + E
Sbjct: 125 ADAPSPAAEEVKAFYDENPDKMKKPG--QVRASHILIKVTEDN--REEAQKKIEELKNEV 180
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGV 267
+ + + ++ G + + +F Q ++ TQ G
Sbjct: 181 TGDAAQFGDLARQHSACPSKDKGGDLGFFGPGSMVKEFDQAAFSLEPGQISDIVETQFGY 240
Query: 268 EYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAIIH 315
I + +++D + + K +V++++ A I
Sbjct: 241 HLILVTERKDPESLTLEEVAPQIESFIKDQKGAILLQAWVEEMKEKADIE 290
>gi|225621308|ref|YP_002722566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira
hyodysenteriae WA1]
gi|225216128|gb|ACN84862.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brachyspira
hyodysenteriae WA1]
Length = 317
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/297 (15%), Positives = 99/297 (33%), Gaps = 26/297 (8%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSGITF 97
I + IT D R L LQ + + ++L+ E + +++++
Sbjct: 26 SIVGIVGSMPITYEDFLSRKTFLTLQARSIGQKVTDDMVYKDLVEERVMYLKLKENNFVI 85
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW----PDVVKNDFM 153
+ N V A+ ++A+ F+ L +GI +K + Q VV N
Sbjct: 86 EENDVKRRLESIAKQYNMNADQFAKQLMAEGISYEEYKNSIKKQIAMENLYGLVVNN--- 142
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + E + N K K+ + L++ +G Q+ R
Sbjct: 143 TEISDKEADEFYNNTKDKSAFEADTLVKLSWIFFKAATFTEKGEKQELASKVRGMAAR-G 201
Query: 214 KDCNKLEKFASKIHDV--SIGKAQYLLESD-----LHPQFQNLLKKSQ-----NNTTNPY 261
+D +L K S+ + G Y L D L Q L ++ ++
Sbjct: 202 QDFAELAKQYSEDEATRKNGGDLGYNLLYDAGKRSLPAQINAGLNLAKRGYKVGTVSSVR 261
Query: 262 V-TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KG + I + +++ + + K+ + +++ + + Y
Sbjct: 262 ELVGKGFYIVKIMEIE--KDMESIRTRVKNYLSEAKMRESFIKWLDEETKRVSVQIY 316
>gi|203284033|ref|YP_002221773.1| basic membrane protein [Borrelia duttonii Ly]
gi|201083476|gb|ACH93067.1| basic membrane protein [Borrelia duttonii Ly]
Length = 336
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/327 (18%), Positives = 113/327 (34%), Gaps = 31/327 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---EKI 75
+ ++FC++ I S+ I N E+IT + ++ LK + +K
Sbjct: 4 FLCFLLFCVLGITSFAQNTPVVIINLHSN-EIITKTEFESKVNTLKKTQGRDLSNIEKKQ 62
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF- 134
+Q LI + L QE K GI + V L+ E ++ QG N
Sbjct: 63 VLQVLIADVLFGQEALKQGIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNELL 122
Query: 135 ---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPD 189
K+ LA Q + + + F E E+ K K + I V FS D
Sbjct: 123 ASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEANKTKFVNPDIARISHVFFSAKD 182
Query: 190 NKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD---LHP 244
K + K + S++ + K SK+ + +G +S L
Sbjct: 183 KKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVLGA 242
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLSAQN 292
F + + + N +NP +++G + + DK + +K +
Sbjct: 243 DFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKNNM 302
Query: 293 TPTKIEKHEAEYVKK----LRSNAIIH 315
++ A+ ++ L +A I
Sbjct: 303 INVHQQQIVAKIQQEIYDKLNKSASIQ 329
>gi|187932868|ref|YP_001884407.1| peptidylprolyl isomerase [Clostridium botulinum B str. Eklund 17B]
gi|187721021|gb|ACD22242.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
B str. Eklund 17B]
Length = 343
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/341 (12%), Positives = 108/341 (31%), Gaps = 45/341 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK- 64
+ + + + ++ ++ + + T+ E IT GD+ + + +
Sbjct: 1 MNKIKKIVASVVVATLAFSIVGCKMIEKTPESIKNTVLATVGKEKITQGDLDRDLKSITE 60
Query: 65 ---------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV-- 107
++ EL+ + ++ E + + + + +N
Sbjct: 61 SLKQKYGENYESNADIKDQLKELKTQYLNAIVNEKVILAKSTELNLRPSDEELNKEVDEA 120
Query: 108 -QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ + + E +++FL++ G ++ FK+Y Q VV+ + ++E+
Sbjct: 121 VNYYKTAYQTEEQYNAFLEQNGFTEDEFKEYQKNQ----AVVRYVYQDMVKDVEVNDDDI 176
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
++ ++ + Q + A+ S + K + K
Sbjct: 177 QKYYDENKETQF-STPGEIDFDKSLQQANEIKSQLDGGADFSEVAKEKSQDPGTK----D 231
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--- 283
+ S+G +Y + + + P +Q G I + +D G E+A
Sbjct: 232 NGGSLGFIEYSSTKYVKEFMDGFKDLKEGEISQPIKSQFGYHIIKVTGVKDDGAEVAHIL 291
Query: 284 --------------LKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+K + Q K E +++ +
Sbjct: 292 VADKGEGTVTPLEDVKEDIRGQLLQKKQSDVFNEKIEEWKK 332
>gi|325106143|ref|YP_004275797.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans
DSM 12145]
gi|324974991|gb|ADY53975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans
DSM 12145]
Length = 454
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 90/276 (32%), Gaps = 22/276 (7%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI- 75
+++I I+ + + ++ + +I ++ ++ A LQ +
Sbjct: 1 MKRYLVIALLIMSSNLFAQKKVIDKVVAVVGDNIILQSEVEQQYAQYILQGTKPDPNIKC 60
Query: 76 -AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTG--LSAEDFSS---FLD 125
+Q ++ + L ++ I + V+ + G E+F L
Sbjct: 61 YIMQSMLSQKLLTKQAAIDSIVVEDGDVDNEVERRMRTMITRAGGEQRLEEFLGRPVILY 120
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL- 184
K I + + Q + ++ K +++ Q + ++ Y +
Sbjct: 121 KDEIRPD-----IREQLV-AQKMQAKITEKVEVTPLDVRRFYQAIPKDSLPVYNTEVEVG 174
Query: 185 -FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
I + + K +A R++ L + S+ + G+ + +
Sbjct: 175 EIVIYPKLTKEEKETYKDKLEALRLRIKNGDSFATLARLYSQDPGSARDGGELPFFDRNT 234
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ +F K + + T+ G ++ + ++R
Sbjct: 235 MAKEFTAWAFKLKPGELSPVFETEFGFHFLEVLERR 270
>gi|118595195|ref|ZP_01552542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales
bacterium HTCC2181]
gi|118440973|gb|EAV47600.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales
bacterium HTCC2181]
Length = 428
Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 98/283 (34%), Gaps = 18/283 (6%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-ALLKLQKIN-------- 69
+ VLI Y + +I + +VIT ++ I + K + +
Sbjct: 10 FIVLIASHACLSWGYDDYEPLDKIVAVVEKDVITKKEMEHGIESFNKGLRGSNPNNLPSE 69
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E+ +I + ELI + + Q E+S I D ++ A N ++ E K G
Sbjct: 70 KEIREIVLDELIEKKIISQYAEQSQIIIDIQQIDNALKNIAANNNITLEQLKESAKKSG- 128
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
G + + + Q + + + + EI +K + +Y I +L +
Sbjct: 129 GLDDLYEEVRFQLTLRIIKERAIFSQINISDYEIKKFIEKERLRNPDQYSISHILLK-KN 187
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ +NQ ++ E ++ + + G + + L F
Sbjct: 188 SGDENQLTLKLEKVLIELQNRPFD---EVAQELSDGPYAEKGGLMGWFELNSLPNIFVEH 244
Query: 250 LK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+K S + P+++ G + + ++ + + S Q
Sbjct: 245 VKGMSVREISKPFLSDNGYHILLV---NEMQSKSTKEKIYSTQ 284
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 5/154 (3%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+K + I +Y I +L +N + + + + +++
Sbjct: 272 QSKSTKEKIYSTQYNINQILLKKNQVTAENDLISK--LNNIKNQISDGLPFAEAASQYSE 329
Query: 225 KIHDVSI-GKAQYLLESDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLG-GE 281
+ G+ ++ ++L P+FQ L + NN P+ T G I + KRD E
Sbjct: 330 DLSSAKKNGELGWVDRNNLLPEFQVELDNASNNSIVGPFKTAAGWHLIELIAKRDKDITE 389
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ Q K E ++ L+ + I
Sbjct: 390 ESQSLSARLQLLNYKAEIRYKDWFHDLKQQSNIE 423
>gi|203287575|ref|YP_002222590.1| basic membrane protein [Borrelia recurrentis A1]
gi|201084795|gb|ACH94369.1| basic membrane protein [Borrelia recurrentis A1]
Length = 336
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 62/327 (18%), Positives = 113/327 (34%), Gaps = 31/327 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---EKI 75
+ ++FC++ I S+ I N E+IT + ++ LK + +K
Sbjct: 4 FLCFLLFCVLGITSFAQNTPVVIINLHSN-EIITKTEFDSKVNTLKKTQGRDLSNIEKKQ 62
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF- 134
+Q LI + L QE K GI + V L+ E ++ QG N
Sbjct: 63 VLQVLIADVLFGQEALKQGIKVADDEVMQTIRSQFGLASLTDEQIKQMIESQGTNWNELL 122
Query: 135 ---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPD 189
K+ LA Q + + + F E E+ K K + I V FS D
Sbjct: 123 ASMKRSLAAQKLVLKIAQPKFSEIKAPSEKEVIEYYEANKTKFVNPDIARISHVFFSAKD 182
Query: 190 NKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD---LHP 244
K + K + S++ + K SK+ + +G +S L
Sbjct: 183 KKRSEVLEQAKDIAKQIKSSKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQSAQNVLGA 242
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLSAQN 292
F + + + N +NP +++G + + DK + +K +
Sbjct: 243 DFIKEVFVLKKGNVSNPISSKEGFHIVKVTEMYSQKFLGLQDKISPNVNMTVKDAIKNNM 302
Query: 293 TPTKIEKHEAEYVKK----LRSNAIIH 315
++ A+ ++ L +A I
Sbjct: 303 INVHQQQIVAKIQQEIYDKLNKSASIQ 329
>gi|291286199|ref|YP_003503015.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio
acetiphilus DSM 12809]
gi|290883359|gb|ADD67059.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio
acetiphilus DSM 12809]
Length = 318
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 50/320 (15%), Positives = 99/320 (30%), Gaps = 27/320 (8%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIR---TTINGEVITDGDISK-----RIA 61
+ + + + ++ C K+ I TINGE IT +
Sbjct: 4 TKILIITIVLCLSLVSCFPGKAGKKNGLTEEEIANTFVTINGERITKDEYEAFISYSNSV 63
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS---NTVNYFFVQHARNTGLSAE 118
+ + N + + ++ I L Q+ G+ D + F LS
Sbjct: 64 MDTETRTNPAVVEALHKDFIEHRLLLQKAVAEGVVVDEGKFKDIVESFQTIKGQKMLS-- 121
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
+F L + + K+ L + I ++ E E+ A ++ KN +
Sbjct: 122 EFEKQL---NMNFDSLKELLKQRIIIGKFLEKIADSDIDISEEELKAFYEEKKNELNADV 178
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ + + Q + + S + EKF+ + G ++
Sbjct: 179 -SAHIQHIVTYEEKAAQNALGLIKQGIPFSEV--------AEKFSVAPEKEAGGDLGFIN 229
Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTK 296
++ F+ L + + G + + + G LK L A+ K
Sbjct: 230 VNEYPDIFKEALALKTGQVSGIMKSDYGYHIFKLLEVQKKSGISFDTLKKKLYAELYGIK 289
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
E EY+ L + I Y
Sbjct: 290 QENKVREYIDDLYQKSEIIY 309
>gi|229816170|ref|ZP_04446480.1| hypothetical protein COLINT_03217 [Collinsella intestinalis DSM
13280]
gi|229808178|gb|EEP43970.1| hypothetical protein COLINT_03217 [Collinsella intestinalis DSM
13280]
Length = 401
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/339 (12%), Positives = 110/339 (32%), Gaps = 33/339 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
V ++ LL+ + + + + + ++ + T+NG I + ++ +I L+
Sbjct: 40 VLVAIGILAMLLSVTAMACSGVLNEVNKEEPYELTGGVAATVNGVNIKEDTVTNQIMSLR 99
Query: 65 L------------QKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQ 108
G + + +I + L + ++ GIT ++ +
Sbjct: 100 TGSYDKDADWAAYLASQGLTPESYRENVIDGIARQYLLVEAEKEYGITVSQEDLDKAWKD 159
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
+N G + F +++ G + + + + + K++ + EI
Sbjct: 160 AVKNYGGDEKAFVEMIEQVGFTKDTYLENIKSSLAQQKL-KDEVAPAEKPSDEEIITYLN 218
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQ-----GFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ + +LF + ++ Q QK + + K K + +
Sbjct: 219 ENLSTYNGARRSSHILFKVAEDATDEQRAKVEAEAQKVLDQINAGEIEFAKAAKKYSEDS 278
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
S G + + P++Q+ L K + + T G I + ++
Sbjct: 279 SADKG---GDVGWDKLTTFVPEYQDALSKLGVDQVSGLVKTTYGYHIIKCTELFEVQAVT 335
Query: 283 AL-------KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+L + Y+S + E++ A I
Sbjct: 336 SLDEVPEGIRTYVSDMLESQAVATAYGEWLTDYTEKAEI 374
>gi|75674587|ref|YP_317008.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter
winogradskyi Nb-255]
gi|74419457|gb|ABA03656.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter
winogradskyi Nb-255]
Length = 301
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 96/307 (31%), Gaps = 50/307 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLK---LQKING 70
L + + V +V A ++ + +NG I D++ L Q
Sbjct: 15 RLVSSVLGGCLAAVLLVGTPVHADDANPVLAKVNGSEIRQSDVNLAAEELGPSLAQMDPA 74
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ + LI + + E+ + EDF L
Sbjct: 75 AKQENVLSFLIDMKIIAKAAEEKKVENS-------------------EDFKKRLA----- 110
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ + + ++ ++ + M+ + + +E R +L +
Sbjct: 111 ------FARDRLLMDRLLASEGKAALTDSAMKTVYTDASKQITSEQEVHARHILVPTEEE 164
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ + ++K D +L K SK S G + + + P F +
Sbjct: 165 AKKVEEELKK------------GADFAELAKKESKDPGASDGGDLGFFTKEQMVPDFSKV 212
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++P TQ G I + +KR + + T+ K +AEYV KL
Sbjct: 213 AFALEPGKISDPVKTQFGWHIIKVEEKRARKAPDFDQVKPQIEQFVTR--KAQAEYVAKL 270
Query: 309 RSNAIIH 315
R A I
Sbjct: 271 RETAKIE 277
>gi|163856017|ref|YP_001630315.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii DSM
12804]
gi|163259745|emb|CAP42046.1| putative peptidyl-prolyl cis-trans isomerase [Bordetella petrii]
Length = 258
Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 92/280 (32%), Gaps = 52/280 (18%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
T+NG+ I+ + + + LL Q L + QE+I + Q EK G+
Sbjct: 22 VATVNGKAISQQSLDQFVKLLVSQGATDTPQLREQVKQEMINRQIFVQAAEKDGV-AKQA 80
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V L +QGI + D++ K+ +
Sbjct: 81 DVQTEIE----------------LARQGILV--------------RALMADYLAKHPVTD 110
Query: 161 MEIPAN--KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+I A K K + EY +R +L + D K N Q + ++
Sbjct: 111 QQIQAEYDKAKQQQAGQMEYKVRHIL--VEDEKTANDLLAQIKGNKSK---------FAD 159
Query: 219 LEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICD 274
L K SK G + ++ F + + + + P TQ G I + D
Sbjct: 160 LAKQNSKDPGSAAKGGDLGWASPTNYVKPFADTVSSLKKGQLADKPVQTQFGWHIIEVED 219
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R + E + Q ++ Y K+LR A I
Sbjct: 220 TRPV--EFPPLDQVRPQLEEMLRQQTLTAYQKELREKATI 257
>gi|152991687|ref|YP_001357408.1| hypothetical protein SUN_0091 [Sulfurovum sp. NBC37-1]
gi|151423548|dbj|BAF71051.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 273
Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 89/284 (31%), Gaps = 33/284 (11%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92
+ M + + T++GE IT +I K+Q+ G ++ A+ LI + L+K+ ++
Sbjct: 15 FSHARMVNAVALTVDGEAITTNEIK------KVQRKTGMSKQQAIDLLIQDRLQKEAMK- 67
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
I T++ Q A +S L KQG + +++ + K
Sbjct: 68 -SIKISEETIDAKIAQIANLNNISIPKMQKMLKKQGTSWSKYRESIRQALKKERFFKEKI 126
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + +K R+ + ++
Sbjct: 127 SRNITPPSED-------------------QLKLYYETHKEAFAMPTSIRMTEYSAKSEKV 167
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
++ + A I +S A + LL T P +
Sbjct: 168 LQNFLRTGS-AKGIKSIS---ATKKTKGMNPAMLSMLLSTPDGRFTKPINAGDKWVVFKV 223
Query: 273 CDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K R L + ++ + + + +Y K+++ A I
Sbjct: 224 NGKQGRKLLPFEEARNAVAGRWRQEQQNQALKDYFSKMKTEANI 267
>gi|307721593|ref|YP_003892733.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas
autotrophica DSM 16294]
gi|306979686|gb|ADN09721.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas
autotrophica DSM 16294]
Length = 276
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 104/299 (34%), Gaps = 41/299 (13%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------ALLKL-QKINGELEKIAVQE 79
++ + S++ T+NG+ IT D+ + ++ + +Q+
Sbjct: 7 LLSALLLTGSIASAKTLVTVNGKAITQQDVDTELMNATQGRFNQVPADRQAAFRQQVLQQ 66
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI + L + +KSGI +S + + + K+ LA
Sbjct: 67 LIGKELIYNDAKKSGI-INSKEYKSEYKKLEQRM---------------------KKELA 104
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
IQ ++ + +K N E++ NK K + R +L D + Q
Sbjct: 105 IQVWQKKLLDS---IKISNKELKDYYNKNKEEFNEKESVHARHILVKAEDEA--KKIIAQ 159
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
+ E+ + + +K ++ G Y + + P F + + + T
Sbjct: 160 LKSLSGEKLKEKFI---ELAKKESTGPSGPKGGDLGYFSKGQMVPAFNDKVFSMKKGEVT 216
Query: 259 -NPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P TQ G I + DK+ +KA++ + K + + + L+ A I
Sbjct: 217 LKPVKTQFGYHVIYVEDKKPSMTRSFDEVKAFIEQRLKMEKFKAVMKKKMDALQKKAAI 275
>gi|21672423|ref|NP_660490.1| survival protein SurA precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091307|sp|Q8KA01|SURA_BUCAP RecName: Full=Chaperone surA homolog; Flags: Precursor
gi|21623033|gb|AAM67701.1| survival protein SurA precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 432
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 100/276 (36%), Gaps = 21/276 (7%)
Query: 16 LTTYFVLIIFCIVPIVS--YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
+ YF LI++ + S Y +I +N ++I + D+++ + LK + +
Sbjct: 1 MKVYFFLILYVFLSFFSITYSKELEIDKIIAIVNNQIILNSDVNQVLFSLKEEDQRVKIP 60
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L +++LI ETL +E +K I + VN ++A ++ E+ +
Sbjct: 61 LKINFLRNKIIKKLITETLILEEAKKFNIVVTDDQVNNVLSKYALKKNITIEELKRNILM 120
Query: 127 QGIG--------DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
N K L ++ I V+ N + E+++ NK +++
Sbjct: 121 NNTNTSFSYNDYFNKIKNSLKVKIIQDYVLHNR--VHISEKEVDLFLNKLINTQNELKKI 178
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
I + K + K + D +++ N ++ K +++ + K
Sbjct: 179 DINCIFLPFIKEKNKIFIKNTKILADHFAKKIKKDASFNYYYEYFKKNNNIFLSKEIRSK 238
Query: 239 ESDLHPQ--FQNLLKKSQNNTTNPYVTQKGVEYIAI 272
+ L +N P + KG + I
Sbjct: 239 SLKYLKKIFLNKLKIIKKNQILGPILGLKGFYILKI 274
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 17/227 (7%)
Query: 99 SNTVNYFFVQHARNTG--LSAEDFSSFLDK-QGIGDNHFKQYLAIQSIWPDV-VKNDFML 154
+ NY++ +N LS E S L + I N K Q + P + +K ++L
Sbjct: 213 DASFNYYYEYFKKNNNIFLSKEIRSKSLKYLKKIFLNKLKIIKKNQILGPILGLKGFYIL 272
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRT--VLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
K +E E K E+ I+ + S+ + Q + + + + +
Sbjct: 273 KINKIENE-------NKENLTTEFHIQHCLIRPSVILDDKQAKNSIYYIYNNIKNKKYSF 325
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
KL G ++ F+N L +N + P + G I
Sbjct: 326 DYAVQKLSHDV--YSSHKKGDLGWISTDFFSNDFRNFLTDLRKNEISKPIKSNFGWHIIK 383
Query: 272 ICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ D R + + L + KI+K ++++L+ ++ I +
Sbjct: 384 LLDIRQVDKSNRIDKNLVYRFLLEKKIKKERYNWIRQLKKSSYIKIF 430
>gi|255655579|ref|ZP_05400988.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-23m63]
gi|296451569|ref|ZP_06893304.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP08]
gi|296878826|ref|ZP_06902826.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP07]
gi|296259634|gb|EFH06494.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP08]
gi|296430098|gb|EFH15945.1| probable peptidyl-prolyl isomerase [Clostridium difficile NAP07]
Length = 318
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/299 (18%), Positives = 109/299 (36%), Gaps = 33/299 (11%)
Query: 44 TTINGEVITDGDISKRIALL----------------KLQKINGE--LEKIAVQELIVETL 85
+N IT K A+L K G LE + + ++ L
Sbjct: 25 AKVNDVEITKEQYKKTKAVLSATNNYINGQSLDELEKTLDKKGRNKLENVIISFMVDNEL 84
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE + G+T + V+ + + L+ + +DK G+ + KQ ++
Sbjct: 85 LYQEAKDKGLTPSKSEVDSKYQELEDKMNLNTS-YKEKMDKAGVDKEYLKQEISRDLAID 143
Query: 146 DVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIK 203
K F + + ++ A K+ V E +L ++ NK + ++ +K
Sbjct: 144 KNKKA-FEDRINISDNDMEAYYTSHKKDFNVEEISASQILISTLDKNKKEVSKDKKEALK 202
Query: 204 DAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
++ L K+ E A K D + G+ Y + D + +F + + K +N
Sbjct: 203 KKADNILTKIKNGESFESLAKKYSDDKATGKNGGQLGYFSKDDKNAEFTKEVFKLKKNEV 262
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + T G + + DKR+ ++ + K + ++KKL +A I
Sbjct: 263 SKVFETSYGYHIVKVTDKRERQKSFNECQSLIRESILNEKYIE----HIKKLNEDAKID 317
>gi|238022941|ref|ZP_04603367.1| hypothetical protein GCWU000324_02862 [Kingella oralis ATCC 51147]
gi|237865749|gb|EEP66887.1| hypothetical protein GCWU000324_02862 [Kingella oralis ATCC 51147]
Length = 315
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 89/277 (32%), Gaps = 12/277 (4%)
Query: 22 LIIFCIVPIVSYKSWAMS----SRIRTTINGEVITDGDISKRIALLKLQKINGELE---- 73
LI+ + I ++A + +RI +N VIT DI + + LK + +
Sbjct: 9 LILSATLGIAFQAAYADTIKPLNRIAMEVNSSVITYRDIERTVRELKSRNAGQNIPEEQF 68
Query: 74 -KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A Q L+ L + + + ++ + A S E+ G
Sbjct: 69 VQAAKQRLLERALIADAARQQQLKATPSGIDEELKRRAAAENTSVENLYKKAQANGYTRE 128
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI-PANKQKMKNITVREYLIRTVLFSIPDNK 191
++ +A + D + +D + +I A K Y + T+ I
Sbjct: 129 AYRLEVAKDVL-ADYLLSDLNNNVNISDAQINEALKSGAALPQGTPYPVYTIRRIILQAG 187
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q ++ ++ D + K S+ + G + + L + L+
Sbjct: 188 NQANMSAVEKRMQQIAQAIQQGSDFATIAKRYSQEAEAVNGGLHEVSDDMLPENVEKLIH 247
Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ N T P + I + R ++
Sbjct: 248 QMQPNQITAPQRVGTSWQIIQLVSSRTENDPAKMQRE 284
>gi|182680158|ref|YP_001834304.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182636041|gb|ACB96815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 299
Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 103/292 (35%), Gaps = 50/292 (17%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQELIVET 84
P V+ + A ++++ +NG+ ITD D+ + L Q + + LI
Sbjct: 28 PYVALSTPA-AAKVLAKVNGKEITDEDLKYATEDLASSLPPQLEGKARDSYLLDYLIDAE 86
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L Q+ + + ++ F++ L F++ L ++ +
Sbjct: 87 LVAQKAQAEKLDKTTD-------------------FNNRLAY-------FREKLLMEVLL 120
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
V K + + A QK + +E R +L + D+
Sbjct: 121 SQVAKGAVTEEALKTAYDEAAKAQKPE----QEIHARHILVATDDD------------AK 164
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVT 263
A RL+ +D K+ K SK G + + + P+F + K +N + P +
Sbjct: 165 AVLKRLKAGEDFAKVAKEVSKDPSADGGDLGWFTKDRMVPEFADAAFKLDENQLSEPVKS 224
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
Q G I + KR + Q I++ + E V +LR A I
Sbjct: 225 QFGWHIIQVLGKRQKT--FPPYDQVREQVARFVIQRAQGELVAQLRKAAKIE 274
>gi|78224731|ref|YP_386478.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
gi|78195986|gb|ABB33753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
metallireducens GS-15]
Length = 323
Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 52/319 (16%), Positives = 107/319 (33%), Gaps = 55/319 (17%)
Query: 10 SDFIKLLTTYFVLIIFC-----IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--- 61
+ + +L+ + + F + + + +NG+ IT GD K +
Sbjct: 12 TAVLTILSATLLAVPFTGCKGKTETGTATAPAKKAGEVIAEVNGDTITTGDFQKELENLP 71
Query: 62 -LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
LK E +K + ++V L Q+ K G+ V + +
Sbjct: 72 PYLKPMADTAEGKKELLDTMVVRELILQQARKDGLDKSP-DVAAKLEELKKR-------- 122
Query: 121 SSFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
+ F K+ + Q K + EM+ + K K T +
Sbjct: 123 --------VVVEAFLKKKVEEQ------------AKVSDEEMKKFYEENKDKFKTGPQVH 162
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLL 238
+L ++ QK +K+ L+ + +L K S + G +
Sbjct: 163 ASHILMK-------SEDEAQKVLKE-----LKEGGNFEELAKKHSIDSAAAKGGDLGWFS 210
Query: 239 ESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPT 295
+ + P+F+ ++ + T+ T+ G I + KR G +K L A P+
Sbjct: 211 KGSMVPEFEKVVFGLKEGETSGIVKTKFGYHIIKLTGKRPAGIRTFDEVKEQLRAAILPS 270
Query: 296 KIEKHEAEYVKKLRSNAII 314
K ++ + ++ A +
Sbjct: 271 KQQEVFQKLKDDIKKGAKV 289
>gi|153952806|ref|YP_001393571.1| peptidylprolyl isomerase [Clostridium kluyveri DSM 555]
gi|219853471|ref|YP_002470593.1| hypothetical protein CKR_0128 [Clostridium kluyveri NBRC 12016]
gi|189037913|sp|A5N4J2|PRSA_CLOK5 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|254783411|sp|B9DY54|PRSA_CLOK1 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|146345687|gb|EDK32223.1| PrsA [Clostridium kluyveri DSM 555]
gi|219567195|dbj|BAH05179.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 341
Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/338 (14%), Positives = 104/338 (30%), Gaps = 44/338 (13%)
Query: 13 IKLLTTYFVLIIFCI----VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
I L ++ +F ++ A++ +NGE IT D+ K ++L
Sbjct: 4 IGRLAVTALIAVFIFSVTGCNMIEKTPEAIAKSTVAEVNGEKITRSDLDKDPNTIQLITQ 63
Query: 69 NG------------------ELEKIAVQELIVETLKKQEIEKSGITFDS----NTVNYFF 106
++ + +LI + Q+ ++ + D + +
Sbjct: 64 VKQQYGENYKENEDAVNTIKTQKEQILDDLITNKVVAQKAKELKLLPDETKLKSDMETQI 123
Query: 107 VQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
Q + AE F++ L QG + FK Q + I
Sbjct: 124 AQLKKQNFNDDAEQFNTALKAQGFTEESFKAMFLSQL--------RTQQTLEKVTESISK 175
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE----- 220
N + Y ++ NK+ + K +A++ + RL + +
Sbjct: 176 NIKITDKEIEDYYNTNKSKYTEQPNKMHLAHILVKTEDEAKKVKKRLDDGEDFAKVAKEV 235
Query: 221 --KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD- 277
ASK + +G Y L + + P + G I K +
Sbjct: 236 SQDTASKDNGGDLGTVNYDNSGYDADFMAGALALKEGAISAPVKSSFGYHIIKCIKKEEY 295
Query: 278 -LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ A+K + Q K ++ +++ + + I
Sbjct: 296 PVKALSAVKDQIKTQLESDKKNSLVSQKIQEWKKASTI 333
>gi|313679732|ref|YP_004057471.1| ppic-type peptidyl-prolyl cis-trans isomerase [Oceanithermus
profundus DSM 14977]
gi|313152447|gb|ADR36298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanithermus
profundus DSM 14977]
Length = 308
Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 97/295 (32%), Gaps = 32/295 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING------------ELEKIAVQELIVETLKK 87
+ + VIT D+ + L Q G L+K +Q ++ + +
Sbjct: 24 ETVVARVGDHVITQADLDLQFDLFLRQSTGGAALSDEARAQLAPLKKQYLQRMVQDAVVV 83
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPD 146
Q E+ G+ D T++ Q A+ F + L + GI +++ +
Sbjct: 84 QAAERLGLAPDEATIDRRVEQ-AKQRLSGEAAFLAALKQYGIPDVATYRRMTYDAMAYKA 142
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI-KDA 205
++ I + + T YL+ ++ P+ V R +
Sbjct: 143 MIGW------------IRQRLRISEAATRMLYLLDREAYAEPEQICTAHILVPSREEAED 190
Query: 206 EESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYV 262
+RL+ D +L + S+ + G + P+F + L + P
Sbjct: 191 VIARLKGGADFAELAREVSQDPGSAPRGGDLGCVALGRFVPEFERAALALQPGQVSEPVQ 250
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
TQ G I + D+R + + Q +VK L ++A Y
Sbjct: 251 TQFGWHVIRMNDRRP--ARVLPYEEVRGQIRAKIEGLAIERFVKNLVAHADAEVY 303
>gi|121591803|ref|ZP_01678995.1| survival protein SurA [Vibrio cholerae 2740-80]
gi|121546332|gb|EAX56604.1| survival protein SurA [Vibrio cholerae 2740-80]
Length = 244
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 73/186 (39%), Gaps = 9/186 (4%)
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F + +Q + F G ++I K ++ + V E R +L I +
Sbjct: 55 FADQIKMQ--NKGSIIGPFRSGVGFHILKIDDVK-GLETVAVTEVNARHIL--IKPTIIL 109
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLK 251
+ QK++ + + +L + S+ + G+ Y P+F++ ++
Sbjct: 110 SDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIE 169
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ P+ T G + + D+R++ + ALK K + + ++++LR
Sbjct: 170 TLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELR 229
Query: 310 SNAIIH 315
++A +
Sbjct: 230 ASAFVE 235
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 210 LRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGV 267
LR D ++ ++ + G ++ + ++ F + +K +++ + P+ + G
Sbjct: 18 LRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGF 77
Query: 268 EYIAICDKR 276
+ I D +
Sbjct: 78 HILKIDDVK 86
>gi|308275078|emb|CBX31677.1| hypothetical protein N47_E51890 [uncultured Desulfobacterium sp.]
Length = 316
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 93/289 (32%), Gaps = 18/289 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQ----------KINGELEKIAVQELIVETLKKQEIEK 92
+NG + ++ + I ++ ++K ++ LI + + QE K
Sbjct: 17 AAVVNGMPVYREELDEEIIKIQKAILGYGKPLTVSKVKSVQKDVLESLIRQEILYQESLK 76
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
SGI D +++ S D+ + L+++ I + L ++ +
Sbjct: 77 SGIKPDEKSIDKEIKTLIGQFK-SETDYKNALNRRNISPEMLRSRLLKNNVLQQYI-GRL 134
Query: 153 MLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
K + +I Q + + + + + + ++R + +
Sbjct: 135 AEKTSVSDNDIIEYYQGRIELFKQPLQVRVSHIFIRTDPKWDAPRKQEERRKAEQILKDI 194
Query: 211 RLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
+ KD + + G Y+ L + ++ + K +N T G
Sbjct: 195 KQGKDFAVIAGEHSDGPTKTKGGDLGYIKMGQLDNKLEDAVFKLKTGELSNIVETDNGFH 254
Query: 269 YIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
DK+ + +K + K ++ + KLR A +
Sbjct: 255 IFKATDKKPETVLSYEDVKEKIRQFLHEEKAKREADQQAGKLREKATVE 303
>gi|291286198|ref|YP_003503014.1| SurA domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883358|gb|ADD67058.1| SurA domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 310
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 95/295 (32%), Gaps = 38/295 (12%)
Query: 41 RIRTTINGEVITDGDIS----KRIALLKLQKINGELEKI--------AVQELIVETLKKQ 88
R+ + +VIT ++ KR+ + + G+ + A+ L + +Q
Sbjct: 29 RVYAVVGEKVITQYELETLNPKRLQYI-YKNFEGDKREEELNKYYVAALDMLTNNYVIEQ 87
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ G+ S V+ + + + S L +K + I + ++
Sbjct: 88 AAAREGVRVSSREVDGAVKEIIEKNSIDEDKLSELLAASNQTMEQYKWSIKIDILKARLM 147
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
F K E +I K N E + + DNK Q + KD +
Sbjct: 148 STVFRPKIIITEDDI--KKYVEANAAALELSDMYELRIMTVDNKEQLDKALAD-FKDTGD 204
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267
R + KF++ + + G ++ + L + +N + + T P
Sbjct: 205 FRSTV-------MKFSTSGNADNGGYLGWVELAFLDDEIRNTIAGKKG-LTEPLEDHGSY 256
Query: 268 EYIAICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIH 315
+ K ++ G+ T E+ E ++ + R +I
Sbjct: 257 RVFYVEGFKNKDNVTGDK------RDSIVKTLQEERSKEIFDNWLAEKRKEILIQ 305
>gi|218777935|ref|YP_002429253.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
gi|218759319|gb|ACL01785.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
Length = 334
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/326 (13%), Positives = 98/326 (30%), Gaps = 29/326 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTING-----------EVITDGDISKRIAL 62
+L + + + SR+ +NG E++T + + A
Sbjct: 9 AILCVSLCFLCASLPAACADDLTEDYSRVVLRVNGMDFHKWEMNLAEILTQDHMFREGAF 68
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ +I + ++ I L QE +G D V+ F + S E +
Sbjct: 69 FRPSEIPA-FRQAMMESTIWAMLIYQEARAAGEKADPAKVDEFIWSFQKRFP-SLEAYEK 126
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPD-VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
L+ + F+ +A + + + F E E + +E ++R
Sbjct: 127 GLEALHVTSEQFR-RIAERYVMTQDYLDRKFDPLSKVSEAEAREYYDGHRENFYQEEMVR 185
Query: 182 --TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLL 238
+L + +L+ ++ + ++ G Y+
Sbjct: 186 ASHILVEFKEEDGDRADEKALITAKRIVRKLKKGENFAAAAREYSDCESKKRGGDLGYIQ 245
Query: 239 ESDLHP-QFQN----LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ DL Q + + + P + G + + DK+ + + +
Sbjct: 246 KGDLPKAQLKPLEEVVFGMEVGEISEPVESVFGYHILYVEDKKPRT--LLGFDEIKDKLI 303
Query: 294 PTKIEKHEAEYV----KKLRSNAIIH 315
E +A + KL+ A I
Sbjct: 304 AKMTEDRKAAMILDHGTKLKETARIE 329
>gi|312142429|ref|YP_003993875.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halanaerobium sp.
'sapolanicus']
gi|311903080|gb|ADQ13521.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halanaerobium sp.
'sapolanicus']
Length = 340
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/346 (15%), Positives = 114/346 (32%), Gaps = 58/346 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM---------SSRIRTTINGEVITDGDISKRIALLK- 64
+ FVL + + S + A + +NGE I+ ++ AL +
Sbjct: 3 FIKKVFVLTAIIFL-VFSMSAMAQNIENTMSLDQTGPAAVVNGEEISRQELEGFAALNEI 61
Query: 65 ---------------LQKING-----ELEKIAVQELIVETLKKQEIEKSGITFDSNT--- 101
LQ +G E + + +LI L QE + G+
Sbjct: 62 LMDILQSNQEFGTVLLQTESGQELIEEFMRYKLDQLISTKLMVQEAKNRGLEVSDQEINQ 121
Query: 102 -VNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL---AIQSIWPDVVKNDFMLKY 156
++ + L+ + L ++G + +K L + + + ++ D +
Sbjct: 122 IIDQQIAGIKQQNNLNDQQLEMALQQEGFASLDEYKSLLIESNMDRFFIEKLRTDITEEI 181
Query: 157 GNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ E+ N+ + + EY I +LF + + + + + A+ + +
Sbjct: 182 TISDAEVEEFYNENQAQFAIPAEYRISHILF---NEADKAEEVLTQIESGADFAEM---- 234
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ---NNTT-NPYVTQKGVEYI 270
++ + + G ++ D L + + +P TQ G I
Sbjct: 235 ----AKEHSIGPTAENGGDLGFIAADDRGIDAVFLNAAKELEVGQVSESPVETQFGFHII 290
Query: 271 AICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
I D RD K L + + + E++ LR +A I
Sbjct: 291 KITDYRDGSSREFAEIKDELKEEMLSQRANQLWNEFIIGLREDAEI 336
>gi|197119425|ref|YP_002139852.1| PpiC-type peptidylprolyl cis-trans isomerase [Geobacter
bemidjiensis Bem]
gi|197088785|gb|ACH40056.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter
bemidjiensis Bem]
Length = 325
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/324 (12%), Positives = 101/324 (31%), Gaps = 24/324 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISKRI----- 60
++++ T L+ C + + + +I +N I I +
Sbjct: 1 MQVMKTIICLLTACALSLAGNQPAWAEPIAEEKGLQIAARVNDRPIYYHQIKANVERTLA 60
Query: 61 --ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L K++ ++ K ++ I + + + ++G + L +
Sbjct: 61 KYKRLGAAKVSDDVRKQVQKDEINRQVDMELLVQAGEKLKQTDLEKKMEALLS---LKSP 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVRE 177
S+ K + ++ L + + + E ++ K TV E
Sbjct: 118 QGSTSAKKDESKEKEMREQLRRNLLAESYLIQRGIQDVRVPEEDLKRFYKDNSAKFTVPE 177
Query: 178 -YLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKA 234
++ ++ + +I E L+ K + ++ +S G
Sbjct: 178 AVKASHIMITVNKKATPEEIAQANAKIVKVREEVLQGKKSFEELAKEHSSGDSASKGGDL 237
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-- 291
Y+ + P+F + + ++ T+ G I + DK+ + + +
Sbjct: 238 GYINPQFMPPEFDKVAFQLKVGEVSDVVKTKFGFHVIKVFDKKPSRVQEFAEVKGLLEKF 297
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315
E+ E +LR +A I
Sbjct: 298 LLNQYQERKRTEIAMELRRDARIE 321
>gi|149280301|ref|ZP_01886423.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Pedobacter
sp. BAL39]
gi|149228990|gb|EDM34387.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Pedobacter
sp. BAL39]
Length = 454
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 110/302 (36%), Gaps = 24/302 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIA--LLKLQKINGEL 72
+ + V+ I ++ ++ S ++ + VI DI+++ A L N +
Sbjct: 1 MKKFLVVAGGLICLFLNTQAQRQSVDKVVAVLGSNVILLSDINQQYAQYLNSGNPSNESV 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA------EDFSSFLDK 126
+ + ++EL+ L KQ+ E + D + V+ Q E FL++
Sbjct: 61 KCLILRELLTTKLLKQQAEIDSVMVDDSQVDEEVDQ---RMRYQIQRAGGEERLEQFLNR 117
Query: 127 QGIGD-NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIR 181
+ + + + Q I +K + +E+ K ++ E+ +
Sbjct: 118 SILQYKDEIRPEIKEQMI-SRKMKGNITQDVSVTPLEVKKYFDSYKKDSLPDIPTEFEVG 176
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
++ K + Q F K DA R++ +D L K S+ + G +
Sbjct: 177 EIVLHPTLTKAEKQRFYDKI--DALRLRVKSGEDFAFLAKSYSEDPGSAPDGGDLGFFDR 234
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ + +F K + + T+ G + + ++R A + QNTP +E
Sbjct: 235 AQMVKEFTAWAFKLKAGEISPVFETEHGYHILQVIERRGEQV-QARHILIRPQNTPQSME 293
Query: 299 KH 300
+
Sbjct: 294 RL 295
>gi|306820710|ref|ZP_07454338.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551320|gb|EFM39283.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 382
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 34/262 (12%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ ++ +I + + ++E++ +T D ++V+ + + ++ L+
Sbjct: 84 NFKTELLENMIEDKIIEKEVKNLSLTVDDSSVDA-----------NVKQYTQILESAPDI 132
Query: 131 DNHFKQ------YLAIQSIWPDVVKND----FMLKYGNLEMEIPANKQKMKN-ITVREYL 179
+F ++ D+VK F K + EI A +K K + +
Sbjct: 133 KKYFADNKLDTNFIKA-MSTKDLVKAALEKDFTDKNQVTQAEIDAYYEKNKAEFSNEQIR 191
Query: 180 IRTVLFS-----IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+L + D +K+I + E + +++ + G
Sbjct: 192 ASHILIKTVNYDLSDMPKDKVEAAKKQIDEIYEKAIAGEDFAELAKQYGQDGTKDTGGDL 251
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQN 292
Y + +F + + + P TQ G I + DK+ ++A K Y+ +
Sbjct: 252 GYFTRDRMVKEFSDAAFALNIGEISKPVKTQWGYHIIKLVDKKSENVDVAQAKEYVKSLL 311
Query: 293 TPTKIEKHEAEYVKKLRSNAII 314
K +Y+K+L+ A I
Sbjct: 312 QKNKF----NDYIKELKEKAKI 329
>gi|313683491|ref|YP_004061229.1| hypothetical protein Sulku_2369 [Sulfuricurvum kujiense DSM 16994]
gi|313156351|gb|ADR35029.1| hypothetical protein Sulku_2369 [Sulfuricurvum kujiense DSM 16994]
Length = 277
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 97/296 (32%), Gaps = 31/296 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+I + +Y A + + IT +I + + +G + LI
Sbjct: 3 LITLSTLLAAYLWSAPIGGVAVLVKNTPITLFEIQEEMK------QSGTSANQSADTLIR 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ L++ E ++ IT S +N + A LS E F + + +
Sbjct: 57 KKLEQLEAQEKKITVSSAEINEELNRMAVQNKLSMEQFLNAM-------QTVRGLSEKDL 109
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ ++ KM T E L ++ ++
Sbjct: 110 ------RARVEESIKGQKLYSSIAFSKMGQPTAEEENEYYQLHMDEFSRPESFEVTTYVS 163
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
E ++ +E +SK + + + ++PQ LL K N + +P +
Sbjct: 164 SSQEALTAKIADPMRHIESISSKD--------ETIPYAKINPQLAQLLNKIPNGSFSPVL 215
Query: 263 T--QKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ G + DK ++ E ++ ++ K + +Y +LR +A I
Sbjct: 216 PNGKNGFMSFYMRDKLNVVTENLDTVRPQIANAILGEKRNQVLNDYFTRLRLSADI 271
>gi|83749030|ref|ZP_00946037.1| Signal Peptide isomerase rotamase [Ralstonia solanacearum UW551]
gi|83724293|gb|EAP71464.1| Signal Peptide isomerase rotamase [Ralstonia solanacearum UW551]
Length = 299
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/281 (18%), Positives = 83/281 (29%), Gaps = 52/281 (18%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I + AL+K EL A L+ L +Q+ K G+ +
Sbjct: 61 AAVVNGHAIPSAKVD---ALIKKSGQPDSPELRNRARDMLVDRELIEQDAAKRGL-LGRD 116
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNL 159
V Q AR L A +F ++ ++ KQY
Sbjct: 117 DVQEQLAQ-ARLNVLVAAEFEDYVKNSPTTEDELHKQY---------------------- 153
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
K K + +EY +L D + + + K + + +K
Sbjct: 154 ------EKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGGNFEEIAKAQSKDKG 204
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQKGVEYIAICDKRD 277
+ G + P+F L + T P TQ G I + D RD
Sbjct: 205 -------SGANGGDLDWANPGTYVPEFSAALTGLKKGEITLTPVKTQFGWHVIRLDDTRD 257
Query: 278 LGG---EIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
E L ++ + +K LR A I
Sbjct: 258 AKIPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATI 298
>gi|257066459|ref|YP_003152715.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus
prevotii DSM 20548]
gi|256798339|gb|ACV28994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus
prevotii DSM 20548]
Length = 359
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 100/277 (36%), Gaps = 21/277 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ ++GE I+ D ++ + +L+ V ++ + L +I+K+ I D
Sbjct: 49 DKTVAIVDGEKISKDDYKDELSFYASMLASQQQLKNSIVTMMVQDKLIANDIKKNDIKID 108
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ +Q +N G E F LD + + FK+ L ++ + F
Sbjct: 109 DKEVDDALMQSVQNFGGQ-EQFDKTLDDYNMSLDKFKETLKKDLMYKKH-REWFDSNNEV 166
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E EI + K+ V+ +L K +K+ ++ K +
Sbjct: 167 TEDEIKKYFEDNKDEFVKV-DASHILV--------QDEETAKEVKEKIDNGEDFAKLAEE 217
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + G + + +F++ + ++P +Q G I + D
Sbjct: 218 YSTDTASAKN--GGAVGAFSKGQMVKEFEDAAFSMKEGEVSDPVKSQFGYHIIKVNKITD 275
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ K ++ + K A+Y+KKL +A +
Sbjct: 276 SFEDS--KEEITKKIKDQKY----ADYIKKLHDDANV 306
>gi|78776347|ref|YP_392662.1| hypothetical protein Suden_0146 [Sulfurimonas denitrificans DSM
1251]
gi|78496887|gb|ABB43427.1| hypothetical protein Suden_0146 [Sulfurimonas denitrificans DSM
1251]
Length = 278
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/297 (19%), Positives = 106/297 (35%), Gaps = 33/297 (11%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
I ++ + + S M + I + GE IT DI + L K+ A LI +
Sbjct: 4 IILVLFLGTMLSAEMINGISVVVKGEAITIYDIKDEMRLSKVNATT------ATDILIRK 57
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL-DKQGIGDNHFKQYLAIQS 142
L+ EI++ IT DS+ V + A + +S ++F + D G+ FK+ +
Sbjct: 58 KLEAAEIQERKITVDSSEVYDDIKKVAASNKMSIDEFYDAVRDSNGLTSAEFKEKTREKI 117
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + ++ R FS+ QN+ ++K+I
Sbjct: 118 LSQKLYSAIAYSSINMPDEDEMREYYELHKDE----FSRPKAFSVIIYSSQNEEALRKKI 173
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPY 261
F S Y + P+ +L+ + Q + T
Sbjct: 174 ---------------TTPMFVSDEIKAEERVLGY---DKISPELAKMLESTQQKSFTPVI 215
Query: 262 VTQKGVEY-IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ QKG + + + ++ LS K E+ ++Y +LR NA I
Sbjct: 216 MDQKGSHMSFYLVESKMPQSSSYEDVQNQLSNAIMGQKREQVLSDYFARLRGNADIQ 272
>gi|189425796|ref|YP_001952973.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi
SZ]
gi|189422055|gb|ACD96453.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi
SZ]
Length = 335
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 94/290 (32%), Gaps = 17/290 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQ--------KINGELEKIAVQELIVETLKKQEIEKSG 94
+NG I D+ K + E+++ + +++ L Q + +
Sbjct: 46 VARVNGVAIPAADLQKALNAFSKSPSAAQVPPGKEKEVQQFLLNQMLGGELMYQVAKATP 105
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ ++ + + +++ L +QG+ + ++ + I + ++ +
Sbjct: 106 VKDLDKKIDDAVTKLKARFK-TNDEYLQGLKEQGLSEKDLRELIRRNVIIENHIEQVIVP 164
Query: 155 KYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
K + E+ +K + +L ++ K + +++
Sbjct: 165 KQVVTDAEMKEFYDKNPETFTQPEQVRASHILITLDAKATDADKKKAKEKIEDLLKQVKA 224
Query: 213 PKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
D KL + S G Y + + F+ + + TQ G I
Sbjct: 225 GADFAKLAQENSGCPSSKQGGDLGYFGKGQMVKPFEETAFAMKPGDVSGVVETQFGYHII 284
Query: 271 AICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ +K+ + + KA ++ K+ + ++ + A I +
Sbjct: 285 KLTEKKAAAKVAFDEV-KAKIADSLKRKKVTEAINATLEDAKKKAKIEVF 333
>gi|315928902|gb|EFV08160.1| surA N-terminal domain protein [Campylobacter jejuni subsp. jejuni
305]
Length = 186
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S S + I ++ E IT DI + + LK+ + A+ LI
Sbjct: 4 ILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKALKIDRNK------ALGVLIN 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
E ++ ++++ GI + ++ + + F + L + F+
Sbjct: 58 EKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDL 117
>gi|218289330|ref|ZP_03493564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus
acidocaldarius LAA1]
gi|218240436|gb|EED07617.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus
acidocaldarius LAA1]
Length = 314
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/307 (11%), Positives = 86/307 (28%), Gaps = 20/307 (6%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+I + + + + IT ++++ +
Sbjct: 5 RWISGFVGAAAGALVVGGVWFGTYAAHGGGSVVAMVGRTPITRQELAQ--------QSEA 56
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGI 129
++ELI L +Q K IT +N G++++ +S L + +
Sbjct: 57 YAGSAMLEELIANALIEQAAAKQHITATDAEINQQLTAIEMQNGITSDVQLNSLLAQNHM 116
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F + + + + + +E KQ TV E R +
Sbjct: 117 TKAQFLDQIRDNILASKLAEAQVHVTDKQIESYY---KQNASMFTVPET--RKIAVIEVK 171
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
K + + + + + + + + L++
Sbjct: 172 TKADAEKALAEIQSGTPFASVAKSVSIDAATRSEGGLLGTFSED---ELKAGDPAIASTA 228
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ P Q G E + + A+++ + Q+ + E + V +
Sbjct: 229 FALQAGAVSQPVKVQGGYEIVQCQAITPQHVQPLSAVRSEI-IQDIKQQNAASETKLVAQ 287
Query: 308 LRSNAII 314
L +A I
Sbjct: 288 LAKSADI 294
>gi|311086454|gb|ADP66535.1| survival protein SurA precursor [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 399
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 15/258 (5%)
Query: 47 NGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEKSGITFDS 99
N E+I + D+++ + LK K L++ +++LIV++L QE I
Sbjct: 2 NDEIILNSDVNEILVFLKKSKKKFIIPLKSDFLKEKVLEKLIVDSLILQEANSKNINITK 61
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIG----DNHFKQYLAIQSIWPDVVKNDFMLK 155
++ A +S F + + I ++F + + I + + +
Sbjct: 62 EQIDTVIKNIALKKHISVNHFKKQILLRNIKNPSYYDNFIKKIEILLKMKTIQDYELHKR 121
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E E+ +K+ + I +P K + V+ RIK AE +L K
Sbjct: 122 INISEQEVNTIFKKLIKDNEKFKKINLSYILLPSFKQDSDNAVRNRIKIAENIVYKLKKG 181
Query: 216 CNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271
+ + + S + K + D+ F L + P V KG+ +
Sbjct: 182 YDFEKLLIECEKNKSTFIVKKMFWKPLLDIQNSFFKTLNIFKKGQILGPIVGDKGLYILK 241
Query: 272 ICDKRDLGGEIALKAYLS 289
+ D I + Y+
Sbjct: 242 VNDIHHKKENIVTEFYMQ 259
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K V E+ ++ L P L N +K E + + + ++ + + +
Sbjct: 249 KENIVTEFYMQHCLIK-PSVILTNTEAKKKIFNIYENIKKGIYTFDDAVKNLSDDYYSSN 307
Query: 231 I-GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G ++ + L + L +N + P + G I D+R + LK
Sbjct: 308 KKGDLGWISKESLGFDLNKKFLILDKNEISEPVKSNWGWHIFKILDRRQVDAFYKLKKNQ 367
Query: 289 SAQNT-PTKIEKHEAEYVKKLRSNAIIH 315
+ KI + +++ L++ A I
Sbjct: 368 AFNIVLNQKIISEKNHWIEDLKNTAYIE 395
>gi|301165393|emb|CBW24964.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus
SJ]
Length = 271
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 44/297 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEKIAVQEL 80
+ V ++S S A + T++G I ++ K + L+ + + + ++
Sbjct: 6 LAITSVLLLSTTSMAAKDPVVATVDGISIKKSELEKTYQENLMFVSDKRVT-RQKVLNDI 64
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I L + +K+ + + V + S L+ +
Sbjct: 65 INRKLGIKRAKKANLD-NDPIVKQKMEDI-----MYHAQISKDLEPR------------- 105
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--KLQNQGFV 198
+ K + ++ + EY +LF + N K +N+ +
Sbjct: 106 ------------LKKIVVTDADVDKYYKDH-----PEYRTAHILFRVRTNPEKEENEAAL 148
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNT 257
+ +K + + KF+ + G + L P+ F + K+ N
Sbjct: 149 NQALKVYNTLKKKPELFSELANKFSQSSTAPNGGDMGFQPAIRLAPEYFNAIKGKADNFI 208
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P TQ G I + + + A K + Y +LR+ A I
Sbjct: 209 TPPVKTQFGYHIIKVMAVKSVK--SINNALYKKIVYDQKRDAILDNYFSELRAKANI 263
>gi|194335197|ref|YP_002016991.1| SurA domain [Pelodictyon phaeoclathratiforme BU-1]
gi|194307674|gb|ACF42374.1| SurA domain [Pelodictyon phaeoclathratiforme BU-1]
Length = 438
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 102/281 (36%), Gaps = 16/281 (5%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQ----K 67
+K + L++F + + A M+ RI + EVI +I R + ++Q
Sbjct: 1 MKKVFGKAALLLFIGSSSLQAPAIADMADRIVAVVGNEVIFKSEIDSRELMARMQYPELT 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG---LSAEDFSSFL 124
N L + + LI + + + + ++ D N+++ + R G S D S L
Sbjct: 61 KNNGLSRSILDGLIDQKIILAKAKIDSVSIDENSISSAASERFRELGTKFTSKADMESRL 120
Query: 125 DK--QGIGDNHFKQYLAIQSIWPDVVKND-FMLKYGNLEMEIPANKQKMKNITVREYLIR 181
K GI +Q L Q + + + + E+ + K + + E +
Sbjct: 121 GKSSAGI-LEGIRQELRNQQLVDTLRRKKSAGVTVSYDEVMAFYSANKEQIPQIPEEVSV 179
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLE 239
+ + P + + + + ++ D + + S+ S G ++ +
Sbjct: 180 SQILKYPPVSAEEKAQ-SLATMERIRTEIKGGADFAAMARQYSQDPGSAQSGGDLGFVAK 238
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
L P F+N ++ ++ T+ G I + K
Sbjct: 239 GQLIPSFENAAYALNEGKISDIVETRYGYHLIQLLSKEPNS 279
>gi|224825282|ref|ZP_03698387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum
2002]
gi|224602203|gb|EEG08381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum
2002]
Length = 264
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 98/303 (32%), Gaps = 53/303 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIA 76
L V + A + + T+NG I D+ + + +L L +
Sbjct: 6 LAALLFVAAIGIPGLAAAQAV-ATVNGVAIDKKDVDEAVTMLSKNSNGKVQDSPALREQI 64
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LI + L QE + G+ + V Q + + +
Sbjct: 65 KENLINKQLILQEATRRGLEKQPDFVERL---------------------QNVREEMLRD 103
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
L + + + +++ ++ + +E R ++ ++
Sbjct: 104 ALFAEIV--------KQSPVTDAKIKARYDQLASQQAGSKEVHARQIMV-------ASEA 148
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KS 253
K I D L+ K L K SK S G + S + P+ LK
Sbjct: 149 EASKVIAD-----LKKGKKFEDLAKTLSKDPAAKQSGGDMGWGNLSQMEPKLAEALKGLG 203
Query: 254 QNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ ++ P+ + G I D RD ++ + AQ ++ A+ V +LRS A
Sbjct: 204 KGQSSSQPFKSGLGWHVFKIEDIRD--AKLPPLNEVKAQIARQIQQEDVAKAVGELRSKA 261
Query: 313 IIH 315
I
Sbjct: 262 KIQ 264
>gi|91203827|emb|CAJ71480.1| similar to peptidyl-prolyl cis-trans isomerase (survival protein
SurA precursor) [Candidatus Kuenenia stuttgartiensis]
Length = 333
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 95/288 (32%), Gaps = 18/288 (6%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGI 95
S ++ TINGE IT ++ + + K Q +EK + L+ + L Q I+K+ I
Sbjct: 51 SKKVVATINGESITKAEVERVLERFKNQLPPDRIASVEKQIIDGLVAQKLFLQFIKKNKI 110
Query: 96 TFDSN----TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ ++ N GL + L+ G K+ + I
Sbjct: 111 AIGDDALKTELDKVREDIKLNPGLQGKSLEEVLESHGSNIEDLKRDITISLSLEKY---- 166
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-L 210
F + +++ K + + E +L + + + K+ + ++
Sbjct: 167 FADTVSDAKVKDYFEKNR-QIYDGTEVQASHILVDTRNLQGEEDLAKAKQKIEKVKAEIA 225
Query: 211 RLPKDCNK-LEKFASKIHDVSIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNPYVTQKGV 267
KD K E+++ G Y + + P + ++ TQ G
Sbjct: 226 EGKKDFAKLAEEYSDCPSSKKGGDLGYFVRKGQMVEPFAEAAFALKVGEVSDVVTTQFGY 285
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D + G + + K + +L+ A I
Sbjct: 286 HIIKVTDIKKGGEIDFNELKPEIKLDILKQNADS--LLDRLKQQAKIE 331
>gi|307721945|ref|YP_003893085.1| SurA domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306980038|gb|ADN10073.1| SurA domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 278
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 105/289 (36%), Gaps = 33/289 (11%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90
++ + + + + + IT DI K + L K A LI + L++ EI
Sbjct: 11 FAFVNADVYDGVAVVVEDKAITLLDIQKEMQAEHLD------AKKASDILIRKKLEELEI 64
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL-DKQGIGDNHFKQYLAIQSIWPDVVK 149
K I+ S V + A GL+ + ++ G+ FK+ + + + +
Sbjct: 65 AKRNISVSSAEVYDDIKKMAEANGLTISQLYDAIREQNGLNSEEFKEKIKQKLLSQKLYA 124
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
M + ++EY + + +K + I A++ +
Sbjct: 125 AIAMSSLSE-----------PNDEEIKEY------YKLHTDKFNHPESFSVIIYSAKD-K 166
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ--KGV 267
RL + + +A D+S + L + + P+ N+L+K+ + P ++ G
Sbjct: 167 SRLKEKTDNPMFYA---PDISTQEQV-LFYNKISPKLANILQKTPQDHFTPILSDGKGGF 222
Query: 268 EYIAICD--KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
I K +LK + K E ++Y +LR NA I
Sbjct: 223 MSFYIKSVAKSKETDLKSLKPQIMNAIMADKREAVLSDYFARLRDNADI 271
>gi|319779226|ref|YP_004130139.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Taylorella
equigenitalis MCE9]
gi|317109250|gb|ADU91996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Taylorella
equigenitalis MCE9]
Length = 258
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 101/295 (34%), Gaps = 49/295 (16%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIV 82
I + +++ +A + T+NG IT+ + + + K +I E +K +++L+
Sbjct: 4 ILLVASLLALPVYAQN---VATVNGVNITNQEFEEVTKAIFKDAQITAEQKKGILEDLVT 60
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ QE +K I D + +R L+ S +++K + + K+ Q
Sbjct: 61 REVLIQEAKKQKIDQDPQVAKQI--EFSREQILTTALLSKYIEKNPVKEEEIKKLYDSQI 118
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
V++Y +R +L + R
Sbjct: 119 ---------------------------KALGDVKQYNVRHILVK-----------DEDRA 140
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQNLLKKSQ-NNTTN 259
K+ + + D + K S + G + S+ PQF +++++ T
Sbjct: 141 KELYQQLVDKKIDFAETAKKESIDQGTASGGGVLGWHPSSNFVPQFAKAVEEAKIGVLTE 200
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P + G I + D R + + + +Y ++L+ A I
Sbjct: 201 PVKSDFGYHLILVDDIRPTP--LPSFEASKREIVNALSLEKVNKYTEELKKKAKI 253
>gi|108803753|ref|YP_643690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrobacter
xylanophilus DSM 9941]
gi|108764996|gb|ABG03878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rubrobacter
xylanophilus DSM 9941]
Length = 354
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/320 (15%), Positives = 106/320 (33%), Gaps = 40/320 (12%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE----------K 74
C + + ++ G +T G + +++ LL Q GE+
Sbjct: 35 GCEAAQTEANLPSGAQKV-AVFEGGEVTQGQVQEQLDLLGRQSGLGEITPDSPQYQSAIA 93
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH---------ARNTGLSAED-FSSFL 124
+ +L+ + + + + GIT V + A+ + E+ F L
Sbjct: 94 QIMPQLVTQEIAQAYAREHGITVTEREVEREIGRIKDQLVRQARAQGQDIGREEAFRRAL 153
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIR 181
++ GI + ++ + Q V+ E E+ ++ + T + +R
Sbjct: 154 EQAGITEAQLREQIREQLP-VQKVQERVAGDARPTEEEVRDYYEENREAQFTTPAQRCVR 212
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+LF ++ + V++R+++ D +L + S+ G +
Sbjct: 213 HILF--NPDQRERAEEVKRRLEE--------GADFAELAREYSQDPGSREKGGDLGCIGR 262
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTK 296
+ P F+ + P TQ G I + D R E + + Q T
Sbjct: 263 GETVPNFEEAAFGAEEGEVVGPVKTQFGYHVIKVYDVRRESTEPLSEVEDRIREQLAATA 322
Query: 297 IEKHEAEYVKKLRSNAIIHY 316
+ +V++ I Y
Sbjct: 323 QAEKFQRWVERQEELRDIRY 342
>gi|253998626|ref|YP_003050689.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
SIP3-4]
gi|313200700|ref|YP_004039358.1| ppic-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
MP688]
gi|253985305|gb|ACT50162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
SIP3-4]
gi|312440016|gb|ADQ84122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
MP688]
Length = 267
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 89/298 (29%), Gaps = 50/298 (16%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQEL 80
+ IV I + T+NG+ I D + A + Q ++ + + V L
Sbjct: 7 ALLAIVAIGISSLAMAADPAVATVNGKPIKQSLFDYITKDAAARGQNVDDNVRTVIVNRL 66
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I L QE ++SG V + A L +L K + D K
Sbjct: 67 ISSELIYQEAQRSGFDKRPEYV--AKQELAARELLVNSYLEDYLKKNPVSDAAVK----- 119
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
E KQ + +EY R +L + + K
Sbjct: 120 --------------------AEYEKYKQ---EVGDKEYNARHILVATEAEAKDIIAQLGK 156
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-SQNNT 257
D KL K SK + G + + F + K + +
Sbjct: 157 ------------GADFAKLAKEKSKDPGGKENGGDLGWFAPGSMVKPFSEAVTKMKKGSY 204
Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P TQ G I + D RD + + ++ + + LRS A I
Sbjct: 205 TADPVQTQFGWHVIKLEDVRDAQP-MPFEKV-QDALKKQLQQRQLEKLLSDLRSKAKI 260
>gi|332284989|ref|YP_004416900.1| putative peptidyl-prolyl cis-trans isomerase [Pusillimonas sp.
T7-7]
gi|330428942|gb|AEC20276.1| putative peptidyl-prolyl cis-trans isomerase [Pusillimonas sp.
T7-7]
Length = 258
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 95/278 (34%), Gaps = 48/278 (17%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
T+NG+ IT + + +ALL Q EL QE++ + Q EK+GI
Sbjct: 22 VATVNGKAITQDKLDQFVALLIEQGAQDTPELRTQVKQEMVNRLVAVQAAEKAGID-KQA 80
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V L +QGI + D + K +
Sbjct: 81 AVKQEIE----------------LARQGILV--------------RALMADHLKKNPVTD 110
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+I A K+K + +EY +R +L ++ + E + + D
Sbjct: 111 AKIQAEYDKIKKLQADKQEYKVRHILVKDQKAAEDLTAAIKSKKVTFEAAAKKDSIDPGS 170
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKR 276
+ + G + ++ P+F + ++K + T+ P +Q G I + D R
Sbjct: 171 GK---------NGGDLGWAPSTNYVPEFADAVEKLKKGQMTDKPVQSQFGWHIIQVDDTR 221
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
D+ + + + + E+ L NA I
Sbjct: 222 DVKFPELAEVKPQIEEMLRQQQLA--EFQDSLMKNADI 257
>gi|302039583|ref|YP_003799905.1| putative peptidylprolyl isomerase, PpiC-type [Candidatus Nitrospira
defluvii]
gi|300607647|emb|CBK43980.1| putative Peptidylprolyl isomerase, PpiC-type [Candidatus Nitrospira
defluvii]
Length = 304
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 89/304 (29%), Gaps = 45/304 (14%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLKLQKINGELE 73
T L + + + ING IT + R + + +
Sbjct: 23 TSAALGFCALGSLAGCTEPPQEEPVIAMINGRSITQSEFDIRWEDLSQATRARYEKEGGK 82
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + ELI+ L QE K G+ I +
Sbjct: 83 RRFLDELIMRELLMQEARKQGLDQSDE----------------------------IREKT 114
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ Q I +++K+ K + E+ A K N + ++ + +P+
Sbjct: 115 LR--YREQLILDELLKDRIKTKVEVSKEELDAYLGKHANQLLANPKVQVSIMLLPNVYAA 172
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
++ +R L ++ + G + L P+ L+
Sbjct: 173 KD-LKRQVEAGGNFTRFALRYSIDERSR-------AKGGDLGPYKKGLLEPEVDALIPSL 224
Query: 254 -QNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
++P T +G + + L + A + L + K K + +LR+
Sbjct: 225 HPGVISDPIKTAQGYYLVKVSPLEPEILQADQATRERLRQELLAEKRRKRLDDVFAELRT 284
Query: 311 NAII 314
A I
Sbjct: 285 GATI 288
>gi|294054384|ref|YP_003548042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coraliomargarita
akajimensis DSM 45221]
gi|293613717|gb|ADE53872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coraliomargarita
akajimensis DSM 45221]
Length = 330
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/331 (12%), Positives = 116/331 (35%), Gaps = 24/331 (7%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVP--IVSYKSWAMSSRIRTTINGEVITDGDISKR----IA 61
SL + L+T +L ++ S + + I GE+IT + + I
Sbjct: 2 SLFRSLVQLSTLILLPCAAVLSSNGQSVNLQQLGNGIAAIAEGEIITVEQLRREVEPIIP 61
Query: 62 LLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARN 112
L+++ + + + +Q +I + Q E+ G+ + ++ + Q A +
Sbjct: 62 RLRVEARTEDEFRTRIDQISREVLQNMIDRIIIVQAAEEKGLLIPQSYIDQEYNQVLAND 121
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQK 169
G F +L QG+ +++ + + + + +E + K
Sbjct: 122 FGGDRARFLEYLKFQGLTPREYRETIRKRVTVDVMRQ-QNRKSQSEMSPERIEEFYVRNK 180
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
++ +R ++ + ++ +++ K + K++
Sbjct: 181 LRFYQSESMHLRQIILT--PMADESITLLRQTAKQVMSDLSEGADFGDTARKYSQDDMRR 238
Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKA 286
S G ++ +DL + + N + P + + +KRD + ++
Sbjct: 239 SGGDWGWIERADLRTELSDAAFSLESGNYSQPIELGGTIFILYCEEKRDEMIQPISEVRD 298
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + ++++LR+ A + Y+
Sbjct: 299 IIEDVLVGEIAREAQERWLEELRTKAYVRYF 329
>gi|319760272|ref|YP_004124210.1| chaperone surA [Candidatus Blochmannia vafer str. BVAF]
gi|318038986|gb|ADV33536.1| chaperone surA [Candidatus Blochmannia vafer str. BVAF]
Length = 433
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 99/265 (37%), Gaps = 23/265 (8%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--------LEKIAVQELIV 82
+Y + + +N +I D+ +I ++KL N L KIA+++LI
Sbjct: 18 TTYSILQTTDKTVALVNNAIILHSDLLNKINIIKLNPFNSPDHLTKDKYLYKIALEQLIT 77
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ L Q K I + N +++ ++ ++ F S L+K G+ + + +
Sbjct: 78 DHLITQVANKKNININYNQIDHIIDHITQSRNMTHTQFLSHLNKYGLNYTQYSSEIYQEI 137
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + + EI Q+ + +++ + ++ +P Q+
Sbjct: 138 LNKVICNHAICQHINISSYEINDIIQQSNFVDFKKKFKLMHIIIELPIYPSS-----QQI 192
Query: 202 IKDAEESRL---RLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQF-QNLLKK 252
SRL ++ N + + + +++ K ++ ++ F Q+L
Sbjct: 193 NSYNNLSRLLIKKIESKTNAQDLIYTYYSNNIFPRITVKKTSWISWQNIPMIFDQSLQSA 252
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRD 277
+ P + G+ +AI D D
Sbjct: 253 KPGDVIGPIHSYDGIHILAIQDILD 277
>gi|219685287|ref|ZP_03540106.1| basic membrane protein [Borrelia garinii Far04]
gi|219673060|gb|EED30080.1| basic membrane protein [Borrelia garinii Far04]
Length = 336
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGEL 72
+ ++ L+I I+ I S+ + I N E+IT ++ + K +
Sbjct: 1 MKSFLFLVILGIMGINSFAQNTPVAIINLYKN-EIITKTGFDSKVDIFKKTQGRDLTAAE 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+K +Q LI + L QE K GI + V L+ E ++KQG +
Sbjct: 60 KKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGTNWS 119
Query: 133 HFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFS 186
+ +V + F E EI K K + + + FS
Sbjct: 120 ELLASMKRSLSSQKLVLKQAQPRFSEVKTPSEKEIVEYYEANKTKFVNPDISRVSHIFFS 179
Query: 187 IPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD--- 241
D K + + + ++ + K +SK + +G ++
Sbjct: 180 TKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNAQNL 239
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
L F + + ++ + ++P +++G I + +K
Sbjct: 240 LGADFIKEVFNFNKGDISSPIASKEGFHIIKVTEK 274
>gi|253701697|ref|YP_003022886.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
gi|251776547|gb|ACT19128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
Length = 341
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 86/290 (29%), Gaps = 19/290 (6%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKING-------ELEKIAVQELIVETLKKQEIEKS 93
+ +NG+ I ++ R + + G ELEK A+ +L+ L Q
Sbjct: 52 EVVARVNGKEIHRNELE-RSKKILMAGQPGIPPYLLKELEKQALDQLVGAELMYQAGLGL 110
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
I + VQ + + L G+ + ++Y + ++V
Sbjct: 111 QIKDLDRMADAKLVQIKSGFK-DQQVYEKELANIGMTEQMLREYSRRDLVIANLVNTKLA 169
Query: 154 LKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
++EI + + +L + + + ++
Sbjct: 170 ADLQVTDLEIEKFYADNPERFEQKEQVRASHILIGCDSKGTAEEKKKARDKAERLLKEVK 229
Query: 212 LPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D KL + S + G Y + P F+ ++ T G
Sbjct: 230 EGADFAKLARENSTCPSATNGGDLGYFPRGKMVPPFEEAAFALKSGEVSDVVETGFGFHL 289
Query: 270 IAICDKRDLGGEIALKAYLSAQNTP----TKIEKHEAEYVKKLRSNAIIH 315
+ D+ + E A + K + A ++ + + +A I
Sbjct: 290 VKQTDR--IKAEKVSLATAREKIVAYLKSQKTGEVVASFIGRAKQDAKIE 337
>gi|20808913|ref|NP_624084.1| parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter
tengcongensis MB4]
gi|46396955|sp|Q8R760|PRSA_THETN RecName: Full=Foldase protein prsA; Flags: Precursor
gi|20517573|gb|AAM25688.1| Parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter
tengcongensis MB4]
Length = 306
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/329 (15%), Positives = 102/329 (31%), Gaps = 56/329 (17%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSW--AMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
++ F+ +IF V +VS S A+S + +NGE IT+ + + +K Q +
Sbjct: 1 MRRKIALFLALIFVGVSLVSCSSKKEAVSGDVVAVVNGEKITNAEYQQIFEQVKEQIESA 60
Query: 71 E-------------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+++ + L+ + L QE +K IT V +
Sbjct: 61 PTYTKDIWNQDYQGKKFLDFVKENVLDSLVAQKLLVQEAKKKNITVTDKEVEEEYN---- 116
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
+ F+S + K+ + + ++ ++ + E+ + K
Sbjct: 117 ----KEKQFNSKVT---------KEQIREYLLIDKLL-AEYTKDVKVTDEELKKYYDEHK 162
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDV 229
+ R +L ++ + RL +D L K S
Sbjct: 163 E-SFEVMRARHIL------------VADEKTAEDIYQRLMKGEDFAALAKEYSIDTATKD 209
Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ G + P+F+ + P TQ G I +
Sbjct: 210 NGGDLGEFPHGVMVPEFEEAAFSLKLGEISKPVKTQYGYHIIKSEGITVKPFDEVKGTIE 269
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
S K + + +Y +L + I +
Sbjct: 270 SYLLNDKKNKVIKEKY-DELVKASKIQKF 297
>gi|288555301|ref|YP_003427236.1| post-translocation chaperonin [Bacillus pseudofirmus OF4]
gi|288546461|gb|ADC50344.1| protein secretion (post-translocation chaperonin) [Bacillus
pseudofirmus OF4]
Length = 304
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 96/305 (31%), Gaps = 27/305 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K + L + S A S + T++G +T+ + ++ + LE
Sbjct: 3 KRMIAAVGLACMTALAACSNDDTATDSNVVVTVDGNEVTEAEFYDKMKE---RYGQATLE 59
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQ-GIGD 131
++ + LI + K + + + + E+ LD Q +
Sbjct: 60 EMVQRVLIAD-------AKDELGVTEEEIEEGIENFKGQLNVETDEELLEILDAQFNMTY 112
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
++ + P V+ + E + A ++ + + + +L +++
Sbjct: 113 ESMDDFVEDMIVPPIVLDKLAKSEVNVTEEDKQAYYEENEELYAEQVQASHILV---EDE 169
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LL 250
++K + L +++ G + ++ P+F+
Sbjct: 170 ETANEVLEKIEAGEDFGEL--------AAEYSMDGSATRGGDLGFFGTGEMVPEFEEAAF 221
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
++ +Q G I + D++ + A Q + K E ++ L
Sbjct: 222 GLEVGEVSDAVESQYGYHIIKVTDRKSGYEDFADDI---EQALIQEQSKSTEEVLRDLVD 278
Query: 311 NAIIH 315
NA I
Sbjct: 279 NATID 283
>gi|154252183|ref|YP_001413007.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvibaculum
lavamentivorans DS-1]
gi|154156133|gb|ABS63350.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Parvibaculum
lavamentivorans DS-1]
Length = 287
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 88/304 (28%), Gaps = 49/304 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGELE 73
+++ F P + K + T+NG I+ D+ + + +
Sbjct: 7 AALALILSFAAAPAFAQKDEPSADEPIATVNGTPISYSDVALADEEMGAALARLEPDVRF 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ + LI + ++ + D V ++
Sbjct: 67 QYLLGMLIDRRVVALAAKEKHVD-DDPQVKR-------------------------RQDY 100
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F + W ++ K + + K +E R +L
Sbjct: 101 FNEKALRDVYWVQLM----QDKVTDEAAKAYYEKNIAGAPAEQEAHARHIL--------- 147
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQF-QNLLK 251
K + + K + K S+ G + ++ P+F + +
Sbjct: 148 ---VQDKAKAAEIAAEIEGGKGFEEAAKEYSQDPGSADGGDLGWFKRDEMVPEFGEAVFS 204
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P TQ G I + + RD+ +A+ + + + ++KLR++
Sbjct: 205 MKPGEVSAPVQTQFGWHLIQLVELRDVPKPTYEEAH--EEIIRQLARQEGQKLMEKLRTD 262
Query: 312 AIIH 315
A I
Sbjct: 263 AKIE 266
>gi|317485995|ref|ZP_07944850.1| ppic-type ppiase domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316922768|gb|EFV43999.1| ppic-type ppiase domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 629
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/381 (13%), Positives = 100/381 (26%), Gaps = 94/381 (24%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-------- 67
+ F +II V S + T+NGE IT + ++ L+ Q
Sbjct: 14 VKIAFGIIILVFVFWGVGGLTGGPSTVILTVNGEPITIQEFQRKYEQLEQQVRAQYPDLD 73
Query: 68 ----INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR----NTGLSAED 119
+L++ +Q LI+E L QE ++ GI + +
Sbjct: 74 AAGLKAMQLKQQLIQNLILENLIMQEAKRVGIVVTPVELRKLIESFPAFHNAEGKFDPDA 133
Query: 120 FSSFLDKQGIGDNHFKQ---------YLAIQSIWPDVVKN-------DFMLKYGNLE--- 160
+ + Q +F+ L V + + LE
Sbjct: 134 YVRVIKAQRNTPGNFEAELRNNMLMNKLRADVTAGAFVPEAEVRDLFRYEGERRILEYVF 193
Query: 161 ------------------------------------------MEIPANKQKMKNITVREY 178
E A Q + + V EY
Sbjct: 194 YPLEDYTSKVTVDDAQIKDYYEANQASFTVPPQADVEYLLIGAEALAAAQNISDAAVSEY 253
Query: 179 --------------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
R +L K + R++ +D ++ K S
Sbjct: 254 YEKNAAQFATPEMVRARHILILSDAKASAEDQAKAKAKIEEIAKRIKAGEDFGEVAKEVS 313
Query: 225 KIHDV--SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G+ + + P+F + + + P TQ G I + +K+ G +
Sbjct: 314 EDPGSGPQGGELGWFAHGQMVPEFDKASFALNPGELSEPVKTQFGWHLIQLEEKKAAGQK 373
Query: 282 IALKAYLSAQNTPTKIEKHEA 302
+ + + E
Sbjct: 374 PLDEVKDQIRTRLAQDEASGK 394
>gi|313672045|ref|YP_004050156.1| sura domain [Calditerrivibrio nitroreducens DSM 19672]
gi|312938801|gb|ADR17993.1| SurA domain [Calditerrivibrio nitroreducens DSM 19672]
Length = 298
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 94/307 (30%), Gaps = 26/307 (8%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----RIALL-------KLQKINGEL 72
+ ++ IV + +RI + +IT ++ R+ + K +
Sbjct: 1 MILLLTIVQQSRSEIINRILAVVGNNIITQYEVESFNPNRVKEIYSIQDEDKRSQAIKTY 60
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K + L+ + ++ +K + + +S +D L K+GI
Sbjct: 61 YKNVLDFLVEQYTLEEIGKKYNVVVTEKEAEEAIDDIIKRNNISVKDLEEALAKEGITMA 120
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDN 190
++ + + + + E +I + + + EY +R +L P
Sbjct: 121 QYRWQIKMDILATRLKSRVINQLVVITENDIKKYVDEHQKEIGSYDEYELRYILLKDPSK 180
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ + ++++ +F+ + G ++ L + +
Sbjct: 181 LTEVRKLIKEK------------GFIAAAIQFSEDKTGKNGGYLGFVNIEHLTKDIKEKV 228
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K + + V+ + + + + A T + +++K +
Sbjct: 229 KDLKPKELVEIESGNEVKIFYVESIKSRYDLSKDQREKVIAALMDTMYKDVYKSWLEKNK 288
Query: 310 SNAIIHY 316
I Y
Sbjct: 289 EAIFIRY 295
>gi|256751661|ref|ZP_05492536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
ethanolicus CCSD1]
gi|256749470|gb|EEU62499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
ethanolicus CCSD1]
Length = 301
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/323 (14%), Positives = 91/323 (28%), Gaps = 55/323 (17%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE----- 71
+L+ F + ++ A + +NGE IT+ + K +K Q +
Sbjct: 3 RKIALLLSFVFIVFLTVSCSA-EKDVVAVVNGENITNAEYKKVFDQVKAQIESSPQYTKD 61
Query: 72 --------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+++ + LI E L QE K+ IT + +
Sbjct: 62 IWDEDYQGKKFLDVVKENVLDSLIAEKLLVQEALKNNITVTDKEIEDEYQ---------- 111
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
++ + + K+ + + + ++ E E+ + K
Sbjct: 112 -------KQKEVSKDITKEDVKNYLLINKLFD-EYTKDVKVTEEELKKYYEDNKEQFETV 163
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQ 235
+L V ++ + +RL +D L K S G
Sbjct: 164 -KASHIL------------VVDEKTAEDIYNRLMKGEDFATLAKEYSVDTATKDQGGDLG 210
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
+ P+F Q + + + P T G I + S
Sbjct: 211 EFPHGVMVPEFDQVVFSLKKGEISKPVKTDYGYHIIKSDGVIIKPFDEVKDTIESYLLDD 270
Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317
K + +Y L A I +
Sbjct: 271 KKNQVIIEKY-DALEKAAKIQKF 292
>gi|225166093|ref|ZP_03727827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae
bacterium TAV2]
gi|224799664|gb|EEG18159.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae
bacterium TAV2]
Length = 351
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/321 (15%), Positives = 107/321 (33%), Gaps = 21/321 (6%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELE 73
LT + ++ I + VIT DI + +A L ++++ + +
Sbjct: 33 LTPGPLATPAAASTNDDGLDMRFANGIAAIVEDRVITVDDIRRELAPILPQIRRDSRNAK 92
Query: 74 K-----IAVQE-----LIVETLKKQEIEKSGIT-FDSNTVNYFF-VQHARNTGLSAEDFS 121
+ AVQE LI TL ++ K G ++ ++ Q A+ F
Sbjct: 93 EFQDKVQAVQEDIVRSLIDRTLIVKDFYKDGRRHIPASYIDNAISDQMAQKFDNDRAKFL 152
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
S+L +G+ +++ + ++ + + + A ++ ++ +E I
Sbjct: 153 SYLRARGLTLRDYRKEVEEDLVYGYMRSQQRKSQSIVSPARVEAYYKQNESKFYQEEAIH 212
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ + Q + R + + K + + + G + + D
Sbjct: 213 LRMIQLNRENGQADAHLIVRANEIIDKFNNGEKFEDLAKAYTQDSRKARGGDWGWQRKVD 272
Query: 242 LHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ----NTPTK 296
L P F L + T P + + D R + + Q
Sbjct: 273 LKPDFSTPLFSLKKGGVTAPILQGDACFILYAEDYR--AAGVPAIDEVRDQIERTLIAQM 330
Query: 297 IEKHEAEYVKKLRSNAIIHYY 317
+ + ++++KLR A I Y
Sbjct: 331 ARESQEKWLEKLRRGAYIKLY 351
>gi|300857299|ref|YP_003782283.1| foldase protein [Clostridium ljungdahlii DSM 13528]
gi|300437414|gb|ADK17181.1| foldase protein precursor [Clostridium ljungdahlii DSM 13528]
Length = 341
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/338 (13%), Positives = 106/338 (31%), Gaps = 44/338 (13%)
Query: 13 IKLLTTYFVLIIFCIVP----IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
IK L + +F ++ A+++ T+NGE IT GD+ K ++L
Sbjct: 4 IKRLVAAAFITVFAFSTAGCNMIEKTPEAIANSTVATVNGEKITRGDLDKDPNTIQLLSQ 63
Query: 69 N------------------GELEKIAVQELIVETLKKQEIEKSGITFDS----NTVNYFF 106
++ + +I + +Q+ ++ + D + ++
Sbjct: 64 AKQQYGSDYAKNDEATSAIKTQKEQILDNMITTKVIEQKAKELKLLPDESKLKSDMDKKI 123
Query: 107 VQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ F + L QG + FK Q N+ +
Sbjct: 124 DDIKKQNFKGDTSQFDAALKAQGFTEESFKTMFLAQL--------KTQAIETNISNYLAK 175
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE----- 220
+ + Y ++ +K+ + K +A++ + RL K + +
Sbjct: 176 SVKVTDKQIKDYYNANKDKYTEQPDKMHLAHILVKTKDEAQKVKARLDKGEDFAKVAKEV 235
Query: 221 --KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD- 277
A+K +G Y + ++P + G I K++
Sbjct: 236 SQDTATKDKGGDLGFVNYNDSGYDAQFMAGAKALKEGAISDPVQSSFGYHIIKCIKKQEY 295
Query: 278 -LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +K + Q + K ++ V++ + A I
Sbjct: 296 PVKDFNKVKDDIKKQLESDQKSKLVSQKVQEWKKAASI 333
>gi|241663100|ref|YP_002981460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12D]
gi|240865127|gb|ACS62788.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12D]
Length = 265
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 89/290 (30%), Gaps = 53/290 (18%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEK 92
+ AM+ +NG+ I + AL+K EL A L+ L +Q+ K
Sbjct: 20 APAMAQN-AAVVNGKAIPSAKVD---ALIKKSGQPESPELRAKARDMLVDRELIEQDAAK 75
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYLAIQSIWPDVVKND 151
G+ + + V AR L A +F ++ ++ KQY
Sbjct: 76 RGL-LERDDVQEQLAS-ARLNVLVAAEFEDYVKNSPATEDELHKQY-------------- 119
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+K K + +EY +L D + + + K A+ +
Sbjct: 120 --------------DKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGAKFEDIA 162
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEY 269
+ +K + G + P+F L + T P TQ G
Sbjct: 163 KAQSKDKG-------SGANGGDLDWANPGTYVPEFSAALTGLKKGQITQTPVKTQFGWHV 215
Query: 270 IAICDKRDLGGEIALKAYLS--AQNTPTKIEKHEA--EYVKKLRSNAIIH 315
I + D RD + + +K+LR A I
Sbjct: 216 IRLDDTRDAKIPSYEDVKPQLLEMMMGDQNWQRSKFQAMLKELREKAKIQ 265
>gi|256827570|ref|YP_003151529.1| parvulin-like peptidyl-prolyl isomerase [Cryptobacterium curtum DSM
15641]
gi|256583713|gb|ACU94847.1| parvulin-like peptidyl-prolyl isomerase [Cryptobacterium curtum DSM
15641]
Length = 404
Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/334 (12%), Positives = 96/334 (28%), Gaps = 41/334 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT--TINGEVI---TDGDISKRIALLKLQK 67
I L L C++ IV+ S + ++ T+NG I T D + +
Sbjct: 6 IMRLVVTGALSAACMLGIVACSSSSSTASSGVAATVNGTEISEQTVTDFVQNFRETQGLT 65
Query: 68 ----------INGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
+ ++I L +Q E++G++ V+
Sbjct: 66 DEDTWGKWMAKSSMTPSQVRDQIIDYFVGIDLTRQAAEENGVSVSDEDVDAQVASMKA-N 124
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKM 170
+ + S L + G + ++ + + + V + G + E+ Q+
Sbjct: 125 YSDDDAWQSALKQAGTTEEGYRDSVHNAMLENALKEKVTAE--STAGASDEELLTYAQQY 182
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+LF + QK + ++ + +
Sbjct: 183 ARSFSGAKKSSHILF-----ASDDSDTAQKVLDQINSGQISFEDAAKEYS--IDTVSAQD 235
Query: 231 IGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIA------ 283
G + L + + + L + + ++ G+ I D + E+
Sbjct: 236 GGNVGWDLLNRFVQPYTDALTNLDKGQVSGLVMSDYGIHIIKCTDVYEAPDEVTEIDQVP 295
Query: 284 --LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
L Y+ + +++ + A I
Sbjct: 296 VELIDYIRKMVESNNETQAYKQWMADYKEKATIE 329
>gi|220935188|ref|YP_002514087.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996498|gb|ACL73100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp.
HL-EbGR7]
Length = 270
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 47/304 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-E 73
L+T + + +S +NG I++ D + L ++ + L
Sbjct: 9 LVTGLLTVTLITGCGRGEAPQAEISGEAVAMVNGVAISEADFQDFLNLQRMTRPGENLLP 68
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ E+I L +Q + G+ D + + T L L Q + ++
Sbjct: 69 DEVLDEMINMELLRQAALQQGLDRDP-DIQRQVER--ARTNL----MVGALIDQRLNQDY 121
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
++ L + + +I A + EY R +L + +
Sbjct: 122 TEEQLRAEY-----------------DRQIQAIDR-------TEYKARHILLDSEADARE 157
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK- 252
++ E +R ++ G + + P F ++
Sbjct: 158 VIAALEAGGDFQELAREH-----------STGPSGPMGGDLGWFTADAMVPAFSEAVQAM 206
Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + +N P T+ G I + D R E + + + +Y+ LR+
Sbjct: 207 EKGSYSNEPVQTEFGWHVILLEDTRR--SEPPPFEAVRDRVAQILDNRALQDYIGDLRTA 264
Query: 312 AIIH 315
A I
Sbjct: 265 AKIE 268
>gi|148262224|ref|YP_001228930.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
gi|146395724|gb|ABQ24357.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
Length = 310
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/319 (17%), Positives = 98/319 (30%), Gaps = 53/319 (16%)
Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
T K+ T I L T + +S S ++ +NG VIT D +K +
Sbjct: 6 TGKLLT-----IALCVTALFGCKAKVGSEAGKESQKKSGQVLAEVNGSVITTSDYNKELE 60
Query: 62 ----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
LK E +K + +IV L Q+ +K GI V +
Sbjct: 61 TLPPYLKPMTETPEGKKELLDTMIVRELILQQADKDGIDKSQA-VADKLADLKKR----- 114
Query: 118 EDFSSFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ F K+ + + K + E++ NK K K T
Sbjct: 115 -----------VVVEAFLKKKVEEE------------AKISDTELQDFYNKNKDKFKTGE 151
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ +L Q +++ L + G +
Sbjct: 152 QVKASHILVKTEPEA---QEILKQLKAGGNFDELAKKHSIDAAA--------AKGGDLGW 200
Query: 237 LLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNT 293
+ + P F+ + + + T+ G I + KR G +K L A
Sbjct: 201 FGKGAMLPDFEKAVFGLKEGAISGVVKTKFGYHIIKLTGKRPAGIRPFDEVKDQLKAAIL 260
Query: 294 PTKIEKHEAEYVKKLRSNA 312
P K ++ + + L+ +A
Sbjct: 261 PEKQQEVFKKLKEDLKKSA 279
>gi|146296118|ref|YP_001179889.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409694|gb|ABP66698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 340
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 59/350 (16%), Positives = 121/350 (34%), Gaps = 50/350 (14%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K ++ I + +I+ ++ +++ +NG+ IT + R
Sbjct: 1 MNRKSLIVITSII-----FVSIILSLLILKDHIVKMIDDNKVVLEVNGDQITKREYKIRF 55
Query: 61 ALLKLQKINGELEKIAVQE------------------LIVETLKKQEIEKSGITFD---S 99
LK I + + LI E L QE + I
Sbjct: 56 NTLKENAIQFSSRTDILDQVFNGKTYRELLKDELFRILIEELLCLQEARRKNIYLTRQEE 115
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-----KQYLAIQSIWPDVVKNDFML 154
+ + + + R+ + F+ +L K G +NHF K + + V L
Sbjct: 116 DEIRKYIEELKRDMEMRNY-FNQYLRKIGSDENHFYRDLQKTRIINKLY--KYVTERITL 172
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ANK + + I V + +R + + ++++ + S L+ +
Sbjct: 173 SDSEVIKYYNANKSQFRKIKVMDIFLRV--------ENAEEDAKKRKVANEIISELKRGE 224
Query: 215 DCNKLEKFASKI--HDVSIGKAQYL----LESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267
D KL K S++ D G Y E+ F+ + K + +N T G
Sbjct: 225 DFEKLVKKYSEVESLDGKKGIIDYFRKGEKEAQYGSVFEEEVFKLAVGQISNVIKTVNGY 284
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + D++ + + K + + K ++ Y++ L+ + I Y
Sbjct: 285 HIVKVIDEKYMPFDEV-KGEIQTKLIKQKKDEVFKSYIESLKKMSKISIY 333
>gi|291166314|gb|EFE28360.1| peptidylprolyl isomerase Pr [Filifactor alocis ATCC 35896]
Length = 365
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 95/274 (34%), Gaps = 21/274 (7%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
I + +I + + ++ ++++I + + Q+ K +T +N F +
Sbjct: 60 IWNTEIESGVTFSQKF------QEEILEKMINDEIILQDAAKKELTVSVEEINTQFDELK 113
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
++ S E F S L+ GI D K+ + + + +
Sbjct: 114 KSID-SQEQFKSILESNGIDDEFLKEQVKKDMTVKKYYDTLMQENEVKEDEVRKYYDEHI 172
Query: 171 KNITVREYLIRTVLFSIP-----DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
T + +LF+ + + + +K + + + ++ L S
Sbjct: 173 DEFTSSQVKASHILFAKKDFDKNEELSKEEVAKKKELAEKVLGMAKNGQNFADLAMKYSD 232
Query: 226 IHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV-TQKGVEYIAICDKRDLGGE 281
+ G Y ++ + +F + Q + ++ V T+ G I + DK++ +
Sbjct: 233 DTGSAKNGGDLGYFDKNTMVKEFSDAAFSMKQGDISDSIVETEFGFHIIKLFDKKENVEK 292
Query: 282 IA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+K +++ K E + L+ A +
Sbjct: 293 FEDVKQSIASNLQYQKYESV----IDGLKKAAKV 322
>gi|301597698|ref|ZP_07242706.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB059]
Length = 344
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V +Y R +L + K+I D+ RL+
Sbjct: 169 VRDGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENA---KQIIDSIYKRLKAG 225
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
+D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 226 EDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 285
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ DKR+ E + L + T+I+ +++++R+NA +
Sbjct: 286 QVTDKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 331
>gi|300691434|ref|YP_003752429.1| peptidylprolyl isomerase; exported protein [Ralstonia solanacearum
PSI07]
gi|299078494|emb|CBJ51147.1| Putative Peptidylprolyl isomerase; exported protein [Ralstonia
solanacearum PSI07]
Length = 265
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 86/286 (30%), Gaps = 47/286 (16%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+ AM+ +NG I + I Q + EL A L+ L +Q+ K G
Sbjct: 20 APAMAQN-AAVVNGHAIPSAKVDALIKKSG-QPDSPELRNRARDMLVDRELIEQDAAKRG 77
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V Q AR L A +F ++ ++ ++
Sbjct: 78 L-LSRDDVQEQLTQ-ARLNVLVAAEFEDYVKNSPTTEDELRKQY---------------- 119
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K K + +EY +L D + + + K + +
Sbjct: 120 -----------EKIKTQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGGNFEEIARAQ 165
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYIAI 272
+K + G + P+F L + TT P TQ G I +
Sbjct: 166 SKDKG-------SGANGGDLDWANPGTYVPEFSAALTGLKKGETTQTPVKTQFGWHVIRL 218
Query: 273 CDKRDLGG---EIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
D RD E L ++ + +K LR A I
Sbjct: 219 DDTRDAKIPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATI 264
>gi|254520524|ref|ZP_05132580.1| peptidylprolyl isomerase [Clostridium sp. 7_2_43FAA]
gi|226914273|gb|EEH99474.1| peptidylprolyl isomerase [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 39/322 (12%)
Query: 13 IKLLTTYFVLIIFCIVP----IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
IK + L IF ++ A+ + + + IT G++ + IA LQ+
Sbjct: 4 IKKIIAAGALSIFAFSAVGCEMIQKTPEAIKNTVLAKVGDVKITKGEVDE-IADPYLQQY 62
Query: 69 NGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+ L A+ L+ E + ++ E+ G+T V+ ++ +
Sbjct: 63 GSDYDTNPNMAEQVKALRTQAINLLVEEKMMLKKAEELGVTPTKEEVDSEVQKYIESLKE 122
Query: 116 SA---EDFSSFLDKQGIGDNHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQK 169
S E F++ L++ G+ + + L + + V D + +I A ++
Sbjct: 123 SYGGDEQFNAALEQAGMTLDEYTTKLTESMKNKLATEKVTEDLFKDVNITDEDIKAYYEE 182
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
K+ E ++ ++ ++ + E+ A+
Sbjct: 183 NKDSFG-EANAEHIVV-------SDEAKAKEIRERIINGEDFATVAKESSEEPAAAESGG 234
Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-------I 282
++G ++ L + + P +Q G I + +
Sbjct: 235 NLGVIKFNTTEYDQDFVAGLKALKEGEISEPVKSQFGYHIIRATKVKQGTFDEVKDSIKT 294
Query: 283 ALKAYLSAQNTPTKIEKHEAEY 304
L+ + + IE+ + +Y
Sbjct: 295 TLENQKKNEIYSSSIEQWKKDY 316
>gi|283779465|ref|YP_003370220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi
DSM 6068]
gi|283437918|gb|ADB16360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi
DSM 6068]
Length = 325
Score = 73.1 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 87/280 (31%), Gaps = 25/280 (8%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRIALL----- 63
+ + L V ++ +V+ + A + T+NG IT D+ +A L
Sbjct: 2 NLLAKLPATCVAASLPLLLLVAMGAAAELSADETLATVNGHAITRADVDAFVAKLAPPKS 61
Query: 64 ---------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
N +L + L+ L +E+S + ++ R
Sbjct: 62 STQPPQPVEVPVVDNPQLRAETLAMLVDRELVLSFLERSKLAASEEDIDLIVASFTRELT 121
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
L +Q + F++ L W V + + +E K+ +++
Sbjct: 122 TQGLTLDDHLKQQQLSLARFRRQLLWNESWKKYVAR----QTTDANLEKFFTKR-VRDFD 176
Query: 175 VREYLIRTVLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIG 232
+ + + N V R ++ + S + S+ S G
Sbjct: 177 GTRIRVAHLRLPVDANATPEAAEQVMARAREIKRSIDAGELTFAAACQQFSEAPSAKSGG 236
Query: 233 KAQYLLESD-LH-PQFQNLLKKSQNNTTNPYVTQKGVEYI 270
+ ++ D + P T+ P ++ GV+ +
Sbjct: 237 ELGWIGRHDSMPEPFAAAAFSLEVGQTSGPVLSPVGVQLV 276
>gi|111114930|ref|YP_709548.1| basic membrane protein [Borrelia afzelii PKo]
gi|216263862|ref|ZP_03435856.1| basic membrane protein [Borrelia afzelii ACA-1]
gi|110890204|gb|ABH01372.1| basic membrane protein [Borrelia afzelii PKo]
gi|215979906|gb|EEC20728.1| basic membrane protein [Borrelia afzelii ACA-1]
Length = 336
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 98/277 (35%), Gaps = 20/277 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGEL 72
+ ++ L+I V I S+ + I N E+IT ++ + K +
Sbjct: 1 MKSFLFLVILGTVGINSFAQNTPVAIINLYKN-EIITKTSFDSKVDIFKKTQGRDLTAAE 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+K +Q LI + L QE K GI + V + E ++KQG
Sbjct: 60 KKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGTNWG 119
Query: 133 HFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEI----PANKQKMKNITVREYLIRTVL 184
+ +V + F E EI ANK + N + + V
Sbjct: 120 ELLSSMKRSLSSQKLVLKQAQPRFSEVKTPSEKEIIEYYEANKTRFVNPDISR--VSHVF 177
Query: 185 FSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD- 241
FS D K + + + ++ + K +SK + +G ++
Sbjct: 178 FSTKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRDDQNAQ 237
Query: 242 --LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
L P F + + ++ + ++P +++G + + +K
Sbjct: 238 NLLGPDFIKEVFNFNKGDISSPIASKEGFHIVKVTEK 274
>gi|332968862|gb|EGK07909.1| hypothetical protein HMPREF0476_1616 [Kingella kingae ATCC 23330]
Length = 318
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 103/313 (32%), Gaps = 12/313 (3%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE----- 71
T +++ + + + +N +IT GD+S+ + LK + N +
Sbjct: 6 TLAAAIMLGLGIQAACAADIKPLNSVLMEVNSSIITYGDVSRTVRELKSRPTNKDIPEAQ 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + A +L+ +L + + ++ + A + + G
Sbjct: 66 LVQAAKMQLVERSLLADAARQQQLRVPEAGIDEELQRRAAQDKTTVAALYAKAASVGYTK 125
Query: 132 NHFKQYLAIQSIWPDVVKND----FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
++ +A + ++ N + + E + A K Y + T+ +
Sbjct: 126 ESYRLEVAKDLLIAHMLSNLNSDINITEAQIQEYAVNAQKTGQALPAAEPYTVYTIRRIL 185
Query: 188 PDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
Q V RI+ + + + +++ + + G + + L
Sbjct: 186 LRATSQADVPAVGNRIQQIATAIAQGTDFASIARRYSQEAQAANGGLHDNITDYMLPENV 245
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEY 304
+ L + + P + I + R ++A + ++++ +
Sbjct: 246 EPFLHTLKVGEVSAPRNAGTTWQMIELVGSRTETDPYKMQAEAIRRLLVRQAQQRNQEAF 305
Query: 305 VKKLRSNAIIHYY 317
+ +L+ +A++ Y
Sbjct: 306 IGQLQQSAVVREY 318
>gi|73541086|ref|YP_295606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
gi|72118499|gb|AAZ60762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
Length = 264
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 55/301 (18%), Positives = 99/301 (32%), Gaps = 50/301 (16%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ F + +++ S +++ +NG+ I + K IA Q N EL A LI
Sbjct: 6 LSFSLAAVLAAGSLPAAAQNAAVVNGKAIPSAKLDKLIAGTG-QPANPELRDRARSMLID 64
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L QE K G+T + Q AR L+ F ++ G D+ ++
Sbjct: 65 RELLVQEANKRGLTQRD-DIQEQLEQ-ARLNVLAGAVFEDYVKTHGASDDELRKQY---- 118
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+K K + +EY +R +L ++
Sbjct: 119 -----------------------DKIKSQFGNGKEYHVRHILVE------------KEAD 143
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKK-SQNNTT- 258
A ++++ + K +SK + G + P+F + + T
Sbjct: 144 AKAIIAKIKGGAKFEDMAKASSKDPGSAANGGDLDWANSGSYVPEFSAAMTTLKKGQMTD 203
Query: 259 NPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
P TQ G I + D RD E + ++ + +K L+ A I
Sbjct: 204 TPVKTQFGWHIIELVDTRDAKIPSFEEVKPQLMQMMMGDQNWQREQFQAMMKSLKDKAKI 263
Query: 315 H 315
Sbjct: 264 Q 264
>gi|237753051|ref|ZP_04583531.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375318|gb|EEO25409.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 284
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 64/172 (37%), Gaps = 16/172 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
++ + + ++ S I +NG+ +T + L K Q+ + +AV
Sbjct: 7 KVLITSIILSVSAVSAAPSLVSGIAFFVNGDPVTLVE------LYKTQQREKVSQDVAVD 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI E L ++EI+K ++ + + + A+ + E +++ G N +K+ +
Sbjct: 61 RLINERLHEEEIKKRKLSVNDLEIEDEIRRVAKQNKTTLEKVRKYVEGNGGNWNTYKEDI 120
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ + + ++ ++ + Y F IP +
Sbjct: 121 KKEILKRKLYQSITQESLKMVDNKEILEY----------YNANQREFLIPQS 162
>gi|119952910|ref|YP_945119.1| basic membrane protein [Borrelia turicatae 91E135]
gi|119861681|gb|AAX17449.1| basic membrane protein [Borrelia turicatae 91E135]
Length = 344
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/334 (15%), Positives = 105/334 (31%), Gaps = 34/334 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTIN---GEVITDGDISKRIALLKLQKI--- 68
+ F+ + C + + + IN E+IT + ++ LK +
Sbjct: 4 IKVIFMGNVLCFLLFFVVGITSFAQNTPVVIINLHSNEIITKTEFDSKVNTLKKTQGRDL 63
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ K +Q LI + L QE K GI + V L+ E ++ QG
Sbjct: 64 SNAERKQVLQILIADVLFGQEALKQGIKVEDAEVMQTIRTQFGLLNLTDEQIKQMVESQG 123
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKY------GNLEMEIPANKQKMKNITVREYLIRT 182
N + ++ K+ G E+ K K + I
Sbjct: 124 TNWNELLSSMKRSLSAQKLILKMAQPKFSEIKIPGEKEVVEYYEANKTKFVNPDIARISH 183
Query: 183 VLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQY---L 237
V FS D K + + + ++ + K SK+ + +G
Sbjct: 184 VFFSSKDKKRSEVLANAKDIVNQIKSKKITFEEAVRKYSNDEGSKVKNGDLGFLARGDQN 243
Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALK 285
++ L F + + + + + P +++G + + DK ++ +K
Sbjct: 244 AQNVLGLDFVKEVFMLKKGDISQPISSKEGFHIVKVTEMYSQRFLGLQDKISPNVDMTVK 303
Query: 286 AYLSAQNTPTKIEKHEAEYVKK----LRSNAIIH 315
+ ++ A ++ L +A I
Sbjct: 304 DAIKNNMVNIHQQQIVARVQQEIYDKLNKSASIQ 337
>gi|289809575|ref|ZP_06540204.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 250
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 64/195 (32%), Gaps = 24/195 (12%)
Query: 140 IQSIWPDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
Q W + + G +++ + + ++I+V E R
Sbjct: 51 GQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHAR 110
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+L + + N + ++++ K S+ + G +
Sbjct: 111 HILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATP 168
Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKI 297
P F++ L K + + P + G I + D R + A + + + K
Sbjct: 169 DIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKF 228
Query: 298 EKHEAEYVKKLRSNA 312
+ A ++++ R++A
Sbjct: 229 SEEAATWMQEQRASA 243
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDL 242
L ++P+N Q +R ++ R D KL S G+ + +L
Sbjct: 2 LIALPENPTSEQVNDAQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQEL 61
Query: 243 HPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
F L + + P + G + + D R
Sbjct: 62 PGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLR 96
>gi|309781979|ref|ZP_07676709.1| peptidyl-prolyl cis-trans isomerase family protein [Ralstonia sp.
5_7_47FAA]
gi|308919045|gb|EFP64712.1| peptidyl-prolyl cis-trans isomerase family protein [Ralstonia sp.
5_7_47FAA]
Length = 265
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 84/289 (29%), Gaps = 51/289 (17%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEK 92
+ AM+ +NG+ I + AL+K EL A L+ L +Q+ K
Sbjct: 20 APAMAQN-AAVVNGKAIPSAKVD---ALIKKSGQPESPELRARARDMLVDRELIEQDAAK 75
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G+ + + + A + + F+ Y+
Sbjct: 76 RGL-LERDDIQEQLA--AARLNV-------------LVAAEFEDYVK------------- 106
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
E+ +K K + +EY +L D + + + K A+ +
Sbjct: 107 NSPATEDELHKQYDKIKAQFGNGKEYHAHHILV---DKEGDAKAIIAKLKAGAKFEDIAK 163
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYI 270
+ +K + G + P+F L + T P TQ G I
Sbjct: 164 AQSKDKG-------SGANGGDLDWANPGTYVPEFSAALTGLKKGQITQTPVKTQFGWHVI 216
Query: 271 AICDKRDLGGEIALKAYLS--AQNTPTKIEKHEA--EYVKKLRSNAIIH 315
+ D RD + + +K LR A I
Sbjct: 217 RLDDTRDAKIPSYEDVKPQLLEMMMGDQNWQRSKFQAMLKDLREKAKIQ 265
>gi|51598371|ref|YP_072559.1| basic membrane protein [Borrelia garinii PBi]
gi|51572942|gb|AAU06967.1| basic membrane protein [Borrelia garinii PBi]
Length = 336
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 96/275 (34%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGEL 72
+ ++ L+I I+ I S+ + I N E+IT ++ + K +
Sbjct: 1 MKSFLFLVILGIMGINSFAQNTPVAIINLYKN-EIITKTGFDSKVDIFKKTQGRDLTAAE 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+K +Q LI + L QE K GI + V L+ E ++KQG
Sbjct: 60 KKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGTNWG 119
Query: 133 HFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFS 186
+ +V + F E EI K K + + V FS
Sbjct: 120 ELLASMKRSLSSQKLVLKQSQPRFSEVKTPSEKEIVEYYEANKTKFVNPDISRVSHVFFS 179
Query: 187 IPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD--- 241
D K + + + ++ + K +SK + +G ++
Sbjct: 180 TKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNAQNL 239
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
L F + + ++ + ++P +++G I + +K
Sbjct: 240 LGADFIKEVFNFNKGDISSPIASKEGFHIIKVTEK 274
>gi|27375316|ref|NP_766845.1| hypothetical protein blr0205 [Bradyrhizobium japonicum USDA 110]
gi|27348452|dbj|BAC45470.1| blr0205 [Bradyrhizobium japonicum USDA 110]
Length = 323
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 49/306 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGE 71
L+ + +++ A + +NG I D++ L Q
Sbjct: 29 RFGLATALVGCLALALIAGPGRAADDPVLAKVNGAEIKKSDVAMAEEELGPSLAQMDPAT 88
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIG 130
++ + LI + + E + F + A L + + K
Sbjct: 89 KDENVLSFLIDMKIVSKAAEDKKV----ADSEEFKKRLAFARNRLLMDSLLANEGKAATT 144
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K+ + A+KQ +E R +L D
Sbjct: 145 PDAMKK------------------------VYEEASKQITGE---QEVRARHILVETEDE 177
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL- 249
+ + K AE ++ + + G + + + P+F +
Sbjct: 178 AKAVKAELDKGADFAELAKKK-----------SKDPGSADGGDLGFFTKEQMVPEFSAVA 226
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
++P +Q G I + +KR+ + + T+ K +A+YV KLR
Sbjct: 227 FALEPGKISDPVKSQFGWHIIKVEEKRNRKAPDFEQVKAQIEQYVTR--KAQADYVAKLR 284
Query: 310 SNAIIH 315
+ A +
Sbjct: 285 TEAKVE 290
>gi|149181601|ref|ZP_01860095.1| post-translocation molecular chaperone [Bacillus sp. SG-1]
gi|148850715|gb|EDL64871.1| post-translocation molecular chaperone [Bacillus sp. SG-1]
Length = 313
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 74/235 (31%), Gaps = 16/235 (6%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ LI + + + E ++ I + + + G E F+ L G
Sbjct: 79 EAALDTLIADKIVELESDEQKIKVTDGEIEEELHKLHESYG-DEEAFNQALTSSGTSLQS 137
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + + ++++ + ++ NK + +L
Sbjct: 138 VKDNIHSYLLTKKLLQDRVSITDDQVQEYFETNKDSFAQ--QEQVEASHILV-------- 187
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKK 252
K +K+ ++ + + + S G+ Y + ++ +F+
Sbjct: 188 ENEETAKEVKEMLDNGEDFAQLAEEYS--VDTSNAGSGGELGYFAKGEMVAEFEEKAFSM 245
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYV 305
+NP T+ G I + DK++ + K + ++ ++
Sbjct: 246 EIEEISNPIETEFGFHIIKVTDKKEAEEAVLEDHKEEIQEILYEQALQTEYPVWL 300
>gi|219684844|ref|ZP_03539786.1| basic membrane protein [Borrelia garinii PBr]
gi|219671789|gb|EED28844.1| basic membrane protein [Borrelia garinii PBr]
Length = 336
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 96/275 (34%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGEL 72
+ ++ L+I I+ I S+ + I N E+IT ++ + K +
Sbjct: 1 MKSFLFLVILGIMGINSFAQNTPVAIINLYKN-EIITKTGFDSKVDIFKKTQGRDLTAAE 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+K +Q LI + L QE K GI + V L+ E ++KQG
Sbjct: 60 KKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGTNWG 119
Query: 133 HFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFS 186
+ +V + F E EI K K + + V FS
Sbjct: 120 ELLASMKRSLSSQKLVLKQAQPRFSEVKTPSEKEIVEYYEANKTKFVNPDISRVSHVFFS 179
Query: 187 IPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD--- 241
D K + + + ++ + K +SK + +G ++
Sbjct: 180 TKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNAQNL 239
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
L F + + ++ + ++P +++G I + +K
Sbjct: 240 LGADFIKEVFNFNKGDISSPIASKEGFHIIKVTEK 274
>gi|167036601|ref|YP_001664179.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039253|ref|YP_001662238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
sp. X514]
gi|300913893|ref|ZP_07131210.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
sp. X561]
gi|307725422|ref|YP_003905173.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
sp. X513]
gi|320115028|ref|YP_004185187.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166853493|gb|ABY91902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
sp. X514]
gi|166855435|gb|ABY93843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300890578|gb|EFK85723.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
sp. X561]
gi|307582483|gb|ADN55882.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
sp. X513]
gi|319928119|gb|ADV78804.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 301
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 50/323 (15%), Positives = 90/323 (27%), Gaps = 55/323 (17%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE----- 71
+L+ F + ++ A + +NGE IT+ + K +K Q +
Sbjct: 3 RKIALLLSFVFIVFLTVSCSA-EKDVVAVVNGENITNAEYKKVFDQVKAQIESSPQYTKD 61
Query: 72 --------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+++ + LI E L QE K+ IT + + +
Sbjct: 62 IWDEDYQGKKFLDVVKENVLDSLIAEKLLVQEALKNNITVTDKEIEDEYQKQKEVNK--- 118
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
I K YL I ++ + K E K N E
Sbjct: 119 ----------DITKEDVKNYLLINKLFDEYTK-------DVKVTEEELKKYYEDNEEQFE 161
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQ 235
+ + + + + + + +RL +D L K S G
Sbjct: 162 TVKASHILVVDE-----------KTAEDIYNRLMKGEDFATLAKEYSVDTATKDQGGDLG 210
Query: 236 YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
+ P+F Q + + + P T G I + S
Sbjct: 211 EFPHGVMVPEFDQVVFSLKKGEISKPVKTDYGYHIIKSDGVIIKPFDEVKDTIESYLLDD 270
Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317
K + +Y L A I +
Sbjct: 271 KKNQVIIEKY-DALEKAAKIQKF 292
>gi|194332867|ref|YP_002014727.1| SurA domain [Prosthecochloris aestuarii DSM 271]
gi|194310685|gb|ACF45080.1| SurA domain [Prosthecochloris aestuarii DSM 271]
Length = 439
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/308 (11%), Positives = 106/308 (34%), Gaps = 16/308 (5%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KING 70
+ L + C + ++ A RI + E++ +I ++ + +LQ
Sbjct: 5 VFRILVALALLCFAGVPVLRA-ATVDRIVAIVGNEIVLQSEIEQQAVMTELQYPEMAKAK 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQ 127
+L + L+++ + + + + + ++ + R+ S E+ K
Sbjct: 64 DLRGRILDNLVMQKIVLTKARLDSVNVNESDIDKQTDERLMFLRSRFPSIEEMEKTFSKS 123
Query: 128 -GIGDNHFKQYLAIQSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+ + K + Q + ++ + + E+E + + + ++ E ++
Sbjct: 124 YAMIEKEIKDDIRNQQLIDNLRRQKMSGVTVSYDEVEDFYRQHRDELPSIPE-SVQISQI 182
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLH 243
+ + + + + RL D +++ + S+ + G Y +
Sbjct: 183 IMYPQVTPENKAKARSLIEDVQQRLLEGADFDEMARRYSQDPGSAEVGGDLGYSKRGEFV 242
Query: 244 PQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
++ + ++ G I + +K G + + L+ + T
Sbjct: 243 KPYEEAAFSLKDGEISAIVESRFGYHIIQLLEKE--GDRVHTRHILAVFDRTTLDRDAAK 300
Query: 303 EYVKKLRS 310
E ++++RS
Sbjct: 301 EKLEEIRS 308
>gi|257092906|ref|YP_003166547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045430|gb|ACV34618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 336
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/319 (15%), Positives = 107/319 (33%), Gaps = 57/319 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVP----IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
L+ I L + +L++ + + A T+NG VI+ KR+ ++
Sbjct: 4 LNSRILLASAASLLVLGACNSDQNAKPAAVAPAAKEAAEATVNGVVIS----KKRVDMIV 59
Query: 65 LQKING------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
Q E + V +LI++TL +E K G+ +
Sbjct: 60 KQAGGNGQADSPEARQGIVDKLIMQTLVAEEAVKKGLDKSPEVIEQI------------- 106
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
+ + + + + + + +V+K ++ ++ IT EY
Sbjct: 107 ---DLMRQSVLASAYVQDLIKNGAASDEVLKAEY--------------ERIKATITGSEY 149
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
R +L + + + ++L + K + K S G+ +
Sbjct: 150 KARHIL--VEKEAEATAIIAKLKKDPGAFAKLAMEKSKDAGSK-------ASGGELGWFD 200
Query: 239 ESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
S + P+F + K + T P T G I + D + + E +
Sbjct: 201 LSRMVPEFAAAVSKLEKGAITQEPVKTPYGYHVIQLEDSKPI--EAPPFEEVKPHLAQQV 258
Query: 297 IEKHEAEYVKKLRSNAIIH 315
+++ +++ L++ A I
Sbjct: 259 QQQNLKKHLDDLKAKAKIE 277
>gi|299132839|ref|ZP_07026034.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2]
gi|298592976|gb|EFI53176.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Afipia sp. 1NLS2]
Length = 298
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/318 (17%), Positives = 99/318 (31%), Gaps = 57/318 (17%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK-- 64
T + ++L + + + + A + + +NG I D++ +
Sbjct: 5 TRTTSAVRLGLLSTAALCMAMTLMAAQPLRADDNPVLAKVNGSEIRQSDVTAAEKDIGPS 64
Query: 65 -LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
Q + VQ LI L + E I + F
Sbjct: 65 LAQLDPASRQASVVQLLIDLKLVAKAAEDKKIADTPD-------------------FKQK 105
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
L + + + ++ + + ++ + + +E R +
Sbjct: 106 LA-----------FTRSRLLMDTLLDQEGKAAVTDAALKKVYDDAAKQISGEQEVHARHI 154
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDL 242
L + ++ I + L+ D +L K SK S G Y + +
Sbjct: 155 LV-------GTEAEAKEIIAE-----LKKGADFAELAKKKSKDPGASDGGDLGYFTKDQM 202
Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK----I 297
P+F + P +Q G I + DKR A KA Q P I
Sbjct: 203 VPEFSAAAFALEPGKISEPVKSQFGWHVIKVEDKR------ARKAPPFEQVKPQLEAFVI 256
Query: 298 EKHEAEYVKKLRSNAIIH 315
K +AEYV KLRS+A I
Sbjct: 257 RKAQAEYVAKLRSDAKIE 274
>gi|163848456|ref|YP_001636500.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aurantiacus J-10-fl]
gi|222526384|ref|YP_002570855.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp.
Y-400-fl]
gi|163669745|gb|ABY36111.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aurantiacus J-10-fl]
gi|222450263|gb|ACM54529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp.
Y-400-fl]
Length = 321
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 81/288 (28%), Gaps = 36/288 (12%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87
S A I + E I D + + G + + ++I L
Sbjct: 49 AGGTSGTVPAPDDAI-ARVGEEFILRRDFDR-------LYLPGADPQNLIDQMIDVELVV 100
Query: 88 QEIEKSGITFDSNTVNYFFVQH-ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
Q G T D T++ Q G F +FL I
Sbjct: 101 QAALAEGATVDEATIDSQVEQLRLAQAGGDEAQFLTFLQDNNI----------------- 143
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
D L + + +K+ T + R +L + + +K +A
Sbjct: 144 ---ADEEELRRLLRRDYLIEQMLLKHTTAEQVRARHILVA----ATPEEAESRKATAEAI 196
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264
+ L+ D L + S + G + F+ + Q T
Sbjct: 197 LAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEEAVFSMQPGELRLVQTD 256
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
G I + + ++ +A L Q +V +LRS+A
Sbjct: 257 FGWHIIEVTEGPEVRS-FTDRALLETQAGQEAFSATFLPWVAELRSSA 303
>gi|187928546|ref|YP_001899033.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12J]
gi|187725436|gb|ACD26601.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12J]
Length = 265
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 85/289 (29%), Gaps = 51/289 (17%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEK 92
+ AM+ +NG+ I + AL+K EL A L+ L +Q+ K
Sbjct: 20 APAMAQN-AAVVNGKAIPSAKVD---ALIKKSGQPESPELRARARDMLVDRELIEQDAAK 75
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G+ + + + A + + F+ Y+
Sbjct: 76 RGL-LERDDIQEQLA--AARLNV-------------LVAAEFEDYVK------------- 106
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
E+ +K K + +EY +L D + + + K A+ +
Sbjct: 107 NSPATEDELHKQYDKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGAKFEDIAK 163
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYI 270
+ +K + G + P+F L + T P TQ G I
Sbjct: 164 AQSKDKG-------SGANGGDLDWANPGTYVPEFSAALTGLKKGQITQTPVKTQFGWHVI 216
Query: 271 AICDKRDLGGEIALKAYLS--AQNTPTKIEKHEA--EYVKKLRSNAIIH 315
+ D RD + + + +K LR A I
Sbjct: 217 RLDDTRDAKIPSYEEVKPQLLEMMMGDQNWQRSKFQAMLKDLREKAKIQ 265
>gi|227499517|ref|ZP_03929624.1| possible peptidylprolyl isomerase PrsA [Anaerococcus tetradius ATCC
35098]
gi|227218396|gb|EEI83647.1| possible peptidylprolyl isomerase PrsA [Anaerococcus tetradius ATCC
35098]
Length = 360
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 101/279 (36%), Gaps = 25/279 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ ++G+ I+ D ++ + +L+ V ++ + L +I+K+ I D
Sbjct: 46 DKTVAIVDGQKISKDDYKSEMSFYASMLASQQQLKNSIVTMMVQDKLIANDIKKNNIKID 105
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ +Q +N G E F LD + FK+ L ++ + F
Sbjct: 106 DKDVDNALMQSVQNFGGQ-EQFDKTLDDYNMDIKKFKETLKKDLMYKKH-REWFDENNKV 163
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+ EI ++ K+ + +L ++ ++ + +D K
Sbjct: 164 SDDEIKKYFEENKDQFTKV-DASHILV-------DDEETAKEIKAKLDN-----GEDFAK 210
Query: 219 LEKFASK--IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
L K SK + G+ + + +F+ + +NP +Q G I I
Sbjct: 211 LAKEYSKDTASAKNGGELGSFGKGQMVKEFEEAAFSMKEGEISNPVKSQFGYHIIKINSI 270
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
D + K ++ + K A+Y+KKL A +
Sbjct: 271 SDSYEKS--KEEITKKIKDKKY----ADYIKKLHDEAHV 303
>gi|222056790|ref|YP_002539152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
gi|221566079|gb|ACM22051.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
Length = 308
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 98/312 (31%), Gaps = 54/312 (17%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR------IRTTINGEVITDGDISKRIA----LLKLQ 66
+FV + V ++ + + +NG IT D +K + LK
Sbjct: 8 KLFFVALCITAVFGCKGQTGTGAKEEKKSGPVLAEVNGSTITGSDFNKEVEALPPYLKPM 67
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
E +K + ++V L Q+ +K GI +
Sbjct: 68 AETVEGKKELLDTMVVRELILQQAKKDGIDKSQAVADK---------------------- 105
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
K + +++ V + K G+ E++ NK K K T + +L
Sbjct: 106 ----LEELKNRIIVEAFLKKKV--EEQAKIGDAELQDFYNKNKEKFRTGEQVRASHILVK 159
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
Q +++ L + + G + + + P+F
Sbjct: 160 TEPEA---QEILKQLKAGGNFEELAKKQSIDAAA--------AKGGDLGWFGKGSMLPEF 208
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEA 302
+N + + T+ T+ G I + KR G + + + A P K ++
Sbjct: 209 ENAVFGLKEGATSGIVQTKYGYHIIKLTGKRPAGVRPLDEVKEQ-IKAAILPEKQQEVFK 267
Query: 303 EYVKKLRSNAII 314
+ + L+ A +
Sbjct: 268 KLKEDLKKGAKV 279
>gi|15606785|ref|NP_214165.1| hypothetical protein aq_1694 [Aquifex aeolicus VF5]
gi|2984020|gb|AAC07564.1| hypothetical protein aq_1694 [Aquifex aeolicus VF5]
Length = 237
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 92/242 (38%), Gaps = 19/242 (7%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
K + LI L Q + + GI V+ Q A+ G++ ++ + L K G+
Sbjct: 11 RKELLNRLIEINLIYQFLVQKGIDIPDEKVDEIVQQIAKANGMTPQELARELSKYGLTLQ 70
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F++++ + I + ++ K E+E+ K K + ++ R L +I +K
Sbjct: 71 DFREFVKKELIATEGLREYLRRKVELSEIELELAKLKEGKVKTKK---RIELVTILKDKG 127
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
+ +++ E L L + KL + +V G L+ + K
Sbjct: 128 KEL------LREIESGNLNLKELAEKLGGEYQSL-EVEKGDLIKELDEQ-------VWKS 173
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + + + + + K + L + K ++ + +K+L+ N+
Sbjct: 174 KEGDVIFAEDKDQ-IYVVKV-GKILTEVSGVNEEELKRKILAKKFQEEYEKLLKELKKNS 231
Query: 313 II 314
+I
Sbjct: 232 VI 233
>gi|118581987|ref|YP_903237.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter
propionicus DSM 2379]
gi|118504697|gb|ABL01180.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelobacter
propionicus DSM 2379]
Length = 300
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 94/306 (30%), Gaps = 46/306 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKINGE 71
+ V + C S + ++ +NG+ IT GD S+ + L+ +
Sbjct: 12 VALCSVALFACQGTPGSSTATKQEGQVLAEVNGKKITSGDFSREVKNLPEYLRAMATTPQ 71
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K + +++ L Q+ K G+ E+ L K+ I +
Sbjct: 72 GRKEMLDTMVIRELILQKASKDGLDKGPE----------------IEEKLQELKKRLIVE 115
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
K+ + + + +++ ++ K + +L
Sbjct: 116 AFLKKKVETD------------AQISDADLKKFYDQNIDKFKAGEQIRASHILVKTEKEA 163
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLL 250
+ ++ E +R G + + + P F + L
Sbjct: 164 KEILAQLKGGAAFEELARKHSVDS-----------SSAKGGDLGWFGKGAMVPAFERAAL 212
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ ++ + G I + KR G +K + A P+K ++ + +L
Sbjct: 213 ALKEGQVSDVVKSDFGFHIIKLTGKRPAGTRPFDEVKDQIKAALMPSKQQEIFQKIKDEL 272
Query: 309 RSNAII 314
+ +A I
Sbjct: 273 KKSAKI 278
>gi|91776233|ref|YP_545989.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus
flagellatus KT]
gi|91710220|gb|ABE50148.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus
flagellatus KT]
Length = 272
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/311 (18%), Positives = 102/311 (32%), Gaps = 56/311 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKING 70
+KL T+ + + + ++ + S T+NG+ I D + A + Q ++
Sbjct: 1 MKLTTSALIATVAFGMLQPAFAAGTNGS--VATVNGKPIKQSLYDYIAKEASSRGQTVDD 58
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ + + +LI L QE +++G+ + + L+ +
Sbjct: 59 NVKNVIINKLIGSELIYQEAQRTGLDKQPD--------YLAKEELTRRELL--------- 101
Query: 131 DNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIP 188
N F + Y+ K E +I +K K +EY R +L S
Sbjct: 102 VNTFLQDYIK---------------KNPVSEADIKLAYEKYKQELGDKEYSARHILVSTE 146
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQF 246
+ K D KL K SK G + + + F
Sbjct: 147 AEAKDIIAQLGK------------GGDFAKLAKEKSKDPGSQEKGGDLGWFSAAGMVKPF 194
Query: 247 QNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ + K Q TT P TQ G I + D R + +++ +
Sbjct: 195 SDAVVKLQKGKYTTTPVQTQFGWHVIKLEDTRATQ--PPSYDDVKDGLQKQLQQRNLEKL 252
Query: 305 VKKLRSNAIIH 315
+ LRS A I
Sbjct: 253 LTDLRSKAKIE 263
>gi|330817257|ref|YP_004360962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
gladioli BSR3]
gi|327369650|gb|AEA61006.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
gladioli BSR3]
Length = 259
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 99/282 (35%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I + +A L + Q+ + +L K+ QEL+ + QE K G+ +
Sbjct: 25 VAVVNGTPIPKSRVDAMVAQLVQQGQQDSEQLRKMVGQELVNREILMQEALKEGL-PNRA 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + DF+ K +
Sbjct: 84 DVKQQVA------------------------------IAQQTVVLRALIEDFVKKNQPSD 113
Query: 161 MEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCN 217
E+ A + K T EY + +L DN+ Q + + K A E+ + KD
Sbjct: 114 AEVKAKYDELAKGATGSEYHLHHILV---DNEQQAKDLIAKIKAGAKFEDLAKQFSKDPG 170
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTN-PYVTQKGVEYIAICDK 275
+ + G + P+F N + T+ P TQ G I + D
Sbjct: 171 SAK---------NGGDLDWADPKSFVPEFANAATHLQKGQMTDEPVKTQFGWHIIRVDDV 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + +KA L+ Q K++ E + LR+ A I
Sbjct: 222 RPIAPPPFEQVKAQLAQQMVQQKLQAFEEK----LRAQAKIQ 259
>gi|17546463|ref|NP_519865.1| isomerase rotamase signal peptide protein [Ralstonia solanacearum
GMI1000]
gi|17428761|emb|CAD15446.1| putative isomerase rotamase signal peptide protein [Ralstonia
solanacearum GMI1000]
Length = 255
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 81/278 (29%), Gaps = 50/278 (17%)
Query: 45 TINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NG I + AL+K EL A LI L +Q+ G+ + V
Sbjct: 19 MVNGHAIPSAKVD---ALIKKSGQPESPELRNRARDMLIDRELIEQDATNRGL-LGRDDV 74
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
Q AR L A +F ++ D+ ++
Sbjct: 75 QEQLAQ-ARLNVLVAAEFEDYVKNSPTTDDDLRKQY------------------------ 109
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K K + +EY +L D + + + K + + +K
Sbjct: 110 ---EKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGGNFEEIAKAQSKDKG--- 160
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
+ G + P+F L + T P TQ G I + D RD
Sbjct: 161 ----SGANGGDLDWANPGTYVPEFSAALTGLKKGEVTQTPVKTQFGWHVIRLDDTRDAKI 216
Query: 281 ---EIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
E L ++ + +K LR A I
Sbjct: 217 PAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATI 254
>gi|299066760|emb|CBJ37954.1| Putative Peptidylprolyl isomerase; exported protein [Ralstonia
solanacearum CMR15]
Length = 265
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/278 (18%), Positives = 83/278 (29%), Gaps = 50/278 (17%)
Query: 45 TINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NG I + AL+K EL A LI L +Q+ K G+ + + V
Sbjct: 29 MVNGHAIPSAKVD---ALIKKSGQPESPELRNRARDMLIDRELLEQDATKRGL-LERDDV 84
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
Q AR L A +F ++ D+ ++
Sbjct: 85 QEQLAQ-ARLNVLVAAEFEDYVKNSPTTDDDLRKQY------------------------ 119
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K K + +EY +L D + + + K + + +K
Sbjct: 120 ---EKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGGNFEEIAKAQSKDKG--- 170
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
+ G + P+F L + T P TQ G I + D RD
Sbjct: 171 ----SGANGGDLDWANPGTYVPEFSAALTGLKKGEVTQTPVKTQFGWHVIRLDDTRDAKI 226
Query: 281 ---EIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
E L ++ + +K LR A I
Sbjct: 227 PAFEDVKPQLLEMMMGDQNWQRAKFQTMLKDLREKATI 264
>gi|242309441|ref|ZP_04808596.1| cell-binding factor 2 [Helicobacter pullorum MIT 98-5489]
gi|239524012|gb|EEQ63878.1| cell-binding factor 2 [Helicobacter pullorum MIT 98-5489]
Length = 272
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 102/301 (33%), Gaps = 43/301 (14%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQ 78
+I+ + ++ + + +NG+ IT+ DI+ + + ++ + + +
Sbjct: 4 MILSSALAFALFQGVSFAETF-AKVNGDEITEKDIAALMRAMPGVSFAQLPQDAKSQVIN 62
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+ I L ++ +K G+ +DF + L+ K L
Sbjct: 63 QAIERKLLIEQAKKDGVE-------------------KTKDFKNALES-------VKDDL 96
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
A++ ++ ++ + E+E N K K + +R +L
Sbjct: 97 ALEVWMRQEME---KVRVSDSEIEKFYNDNKTKFVQPEVAKVRHILV------NSETEAK 147
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
+ L K + + + G ++ + P+F + K ++
Sbjct: 148 NIISDVKRAGKNSLAKFEELAKSKSKDGSAQNGGDVGWIARGQVVPEFADAAFKLNKGQY 207
Query: 258 TN-PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P TQ G I + DK+ +K + K +++ + ++LR A +
Sbjct: 208 TQTPVKTQFGYHVIYVEDKKPTTTLALKDVKGQIEQNLRLMKFQENVKKEGQELRKKAKV 267
Query: 315 H 315
Sbjct: 268 E 268
>gi|153873081|ref|ZP_02001781.1| survival protein SurA [Beggiatoa sp. PS]
gi|152070452|gb|EDN68218.1| survival protein SurA [Beggiatoa sp. PS]
Length = 328
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 4/166 (2%)
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKN 172
+ F L+K+G +++ Q + + + M + + EI Q +
Sbjct: 1 MDLPSFRQKLEKEGYSYKQWREQARQQLMVERLQQRYVMNRITITDREIENFLATQTQQG 60
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSI 231
EY I +L + P+ ++++ + ++L+ D + +
Sbjct: 61 TISNEYHILHILIATPEAPSPENITLKQQKAEEVVAKLKQGADFEATAVAISDSRQALDG 120
Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
G +L ++ F ++ + + + P G I + +KR
Sbjct: 121 GDLGWLKAGEMPTLFDGVVNQMKVDEIKGPLRDSSGFHIIKLVEKR 166
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 112/312 (35%), Gaps = 58/312 (18%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-- 116
R L K + + A Q+L+VE L+++ + IT + F + +S
Sbjct: 7 RQKLEKEGYSYKQWREQARQQLMVERLQQRYVMNR-ITITDREIENFLATQTQQGTISNE 65
Query: 117 -------------------------AEDFSSFLDK------QGIGDNHFKQYL-AIQSIW 144
AE+ + L + + + +Q L W
Sbjct: 66 YHILHILIATPEAPSPENITLKQQKAEEVVAKLKQGADFEATAVAISDSRQALDGGDLGW 125
Query: 145 ----------PDVVKNDFMLKYGNLEME------IPANKQKMKNITVREYLIRTVLFSIP 188
VV + + + I +++ I + + R +L
Sbjct: 126 LKAGEMPTLFDGVVNQMKVDEIKGPLRDSSGFHIIKLVEKRGGKIAITQTKARHILMKT- 184
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQF 246
N+L + ++ R+K+ +SR+ L D KL + S+ G ++ DL +F
Sbjct: 185 -NELMSDVEIEFRLKEI-KSRIELGDDFAKLAEAYSEDTGSAAKGGSLGWVNPGDLATEF 242
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEY 304
+ ++ S N ++P+ ++ G + + ++R Y +A+ K+ + +
Sbjct: 243 EAVMNDLSVNKVSDPFKSRFGWHIVQVLERRQHDNTEQALRYQAARQIHQRKVYEELEAW 302
Query: 305 VKKLRSNAIIHY 316
+++LR A I Y
Sbjct: 303 LRQLRDQAYIDY 314
>gi|213613182|ref|ZP_03371008.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 240
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 64/195 (32%), Gaps = 24/195 (12%)
Query: 140 IQSIWPDV------------------VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
Q W + + G +++ + + ++I+V E R
Sbjct: 41 GQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQSISVTEVHAR 100
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+L + + N + ++++ K S+ + G +
Sbjct: 101 HILLK--PSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATP 158
Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKI 297
P F++ L K + + P + G I + D R + A + + + K
Sbjct: 159 DIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKF 218
Query: 298 EKHEAEYVKKLRSNA 312
+ A ++++ R++A
Sbjct: 219 SEEAATWMQEQRASA 233
>gi|15896462|ref|NP_349811.1| peptidylprolyl isomerase [Clostridium acetobutylicum ATCC 824]
gi|15026287|gb|AAK81151.1|AE007817_5 Parvulin-like peptidyl-prolyl isomerase, PRSA B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
Length = 353
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/333 (17%), Positives = 116/333 (34%), Gaps = 40/333 (12%)
Query: 13 IKLLTTYFVLIIFCI----VPIVSYKSWAMSSRIRTTINGE-VITDGDISKRIA--LLKL 65
K + T ++ +F +V + A++S++ TI G IT G+I K + +L
Sbjct: 24 AKQIATALLVGMFTFSAVGCSMVEKRPEAINSKVVATIYGNQTITRGEIDKLAKGTVEQL 83
Query: 66 QKINGEL--------------EKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFV 107
+ G+ ++ + LI + + ++ + IT + V+ +
Sbjct: 84 KSQYGDSYEKNEEAVAALKKQKEQILTSLIDQKIFLKKAKDQKITLTKDEIKTNVDDVYA 143
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
Q+ + + +F S L + G FK L ++I +++ + + E
Sbjct: 144 QYQQEFK-TESEFKSQLSQYGYTVAEFKDQLKNRAISNKLIQ-QVVKDVKVSDDEAKKYY 201
Query: 168 QKMKNITVRE---YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
KN + + +L V+ RI E+ ++ S
Sbjct: 202 DSHKNSYTQSPNTVHLAHILVKTEK----EAKAVKARIDKGED----FATVAKQVSTDGS 253
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEI 282
K +G Q + LK + N + P TQ G I K + +
Sbjct: 254 KEKGGDLGDIQENDSNYDKTFMAAALKLNDNQVSAPVHTQFGWHVIKCIKKTEYPVKDFN 313
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++K + TK + + +KK S A I
Sbjct: 314 SVKDDIKQTVLSTKQKSVYQKTLKKWESQANID 346
>gi|325107772|ref|YP_004268840.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
gi|324968040|gb|ADY58818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
Length = 310
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/272 (12%), Positives = 90/272 (33%), Gaps = 17/272 (6%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
F+ + ++F L + + + + IT + + L L +
Sbjct: 6 RFLLVALSFFSLCTTFLAAQPEASPKSSQQELAALVGKTRITQAQVDLYLTTLGLPEDQW 65
Query: 71 EL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQ 127
+ AV +LI TL +Q + + +T S T++ + + E + L K
Sbjct: 66 DTHRSRAVDQLIERTLVRQFLNERNVTPPSATLDRQLALVEQVLRNEENPE---AALKKL 122
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFS 186
G+ + + L++ W V+ E +I +K ++ + + +
Sbjct: 123 GMTRDELQAELSLPLAWRRYVRQ------IVSERQIAEYFEKHQSELDGTKRKAAQIFLK 176
Query: 187 IPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYL-LESDLH 243
+P + + + R+ + ++ + + S+ G+ +
Sbjct: 177 LPQDASETDIEQAKSRLNELKQQIQAGQLTFAEAAQQHSESPSADKGGELGAFTFSGQMP 236
Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + + P+ + GV + + +
Sbjct: 237 AAIAKQAFETPVGEISEPFASSFGVHLLHVTE 268
>gi|258510728|ref|YP_003184162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477454|gb|ACV57773.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 314
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/306 (10%), Positives = 84/306 (27%), Gaps = 18/306 (5%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+I + + + + IT ++++ +
Sbjct: 5 RWISGFVGAAAGALVVGGVWFGTYAAHGGGSVVAMVGKTPITRQELAQ--------QSEA 56
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGI 129
++ELI L +Q K +T + +N G++++ +S L + +
Sbjct: 57 YAGSAMLEELIANALIEQAAAKQHVTATNAEINQQLTAIEMQNGITSDAQLNSLLAQNHM 116
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F + + + + + + KQ TV E R +
Sbjct: 117 TKAQFLNQIRDNILASKLAEAQVHVTDKQIASYY---KQNASMFTVPET--RKIAIIAVK 171
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
K + + + + + + + + L++
Sbjct: 172 TKADAEKALTEIQSGTPFASVAKSVSIDAATRSKGGLLGTFSLD---ELKAGDPAIASTA 228
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKL 308
++P Q G + + E ++ Q + + E + V +L
Sbjct: 229 FALKAGAVSDPVKVQGGYDIVQCQAITPQHVEPLSAVRSQIIQAIKQQNAESETKLVAQL 288
Query: 309 RSNAII 314
+A I
Sbjct: 289 AKSADI 294
>gi|193211689|ref|YP_001997642.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum
NCIB 8327]
gi|193085166|gb|ACF10442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum
NCIB 8327]
Length = 439
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 111/315 (35%), Gaps = 21/315 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KIN 69
K + +F ++I + + + + +I + E+I I+++ + LQ K +
Sbjct: 3 KTVFAFFAVLIVALAGLSDAIASSAPDKIVAIVGREIILKSQINEQELMYHLQYRESKND 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL--SAEDFSSFLDKQ 127
L + ++ +I + + + I+ + ++ A+ L S+ ++
Sbjct: 63 PGLRQKILKNMIDQKILLTKARIDSISVNEQGIDE-MAN-AKYNALRSQFPSVSAMEERF 120
Query: 128 GIGDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRT 182
+ N KQ + +V + E+ A K +N V E + +
Sbjct: 121 SLPVNRLKQDIRDDIRNQQMVDALRRKHFHDVTVSYDEVMAFYGKERNNLPKVPEMVSVS 180
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLES 240
L P+ + +I+ A +L+ D L + S G ++ +
Sbjct: 181 QLIRYPEIADSEKQRAMSKIQ-AISQQLQNGADFATLARETSDDPGSRELGGDLGFVHKG 239
Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+L P F+ + ++ G I + DK D I ++ L+A +
Sbjct: 240 ELVPSFEEAAYALKPGQISGVVESRFGYHLIQLIDKEDQS--IHVRHILAAFDRNKTDLP 297
Query: 300 HEAEYVKKLRSNAII 314
++ +R A I
Sbjct: 298 KTVRMLEAIR--ADI 310
>gi|146329550|ref|YP_001209813.1| PpiC-type peptidylprolyl cis-trans isomerase [Dichelobacter nodosus
VCS1703A]
gi|146233020|gb|ABQ13998.1| PpiC-type peptidylprolyl cis-trans isomerase [Dichelobacter nodosus
VCS1703A]
Length = 421
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 98/280 (35%), Gaps = 19/280 (6%)
Query: 13 IKLLTTYFVLII----FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+KL+ +F L++ + I +N E I+ +++ LL+ Q+
Sbjct: 1 MKLIILFFALMLLPSWALDFGPKPMPQQNVLDEIGLVVNEEAISRKRLNE---LLEQQRA 57
Query: 69 NGELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
++ +++I++ L Q + + +T +++ A +S
Sbjct: 58 RAPRDQPYSEEQLQEQIIMQILMAQMAKSAHLTVKDAEIDHAIATVAAQHKISVAQLYQQ 117
Query: 124 LDKQ-GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+ + G+ ++Q +A + ++ + E +I ++ ++ ++
Sbjct: 118 IARTMGLSQTEYRQQIAQLMLQDELKQRLIGRDINISEQQINNQITQIIRQRGTKFHLQD 177
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+L +P +L Q + Q+ ++ + N L K A + + +
Sbjct: 178 LLLPLPKKELPEQAYRQQMQTISQALK----TTGNDLAKTAQLLPKAQFNDLGAVNLGQI 233
Query: 243 HPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGG 280
+F + + P G+ ++ + K G
Sbjct: 234 PAKFAQAVATLNSGELVAEPVADADGLHFLKVVSKTAANG 273
Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 55/150 (36%), Gaps = 4/150 (2%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
++ V + +R +L N Q +++ +S + + + V
Sbjct: 273 GQHYEVEQGKLRHILIRRDPNNPQFSRLQIEQLYQQLQSGADFAQLAARYSQDPRSA--V 330
Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG-GEIALKAY 287
+ G ++ L P+F ++ + N + P+ + G I + ++ + E ++ +
Sbjct: 331 NGGDLGWMSTDQLDPRFVAVMHRIPFNTISEPFESALGWHIIEVFARQTVDRSEERIRDH 390
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + ++R A I ++
Sbjct: 391 IRRTLYEEALALAWEQKCAQMRQAAYIRWF 420
>gi|110803835|ref|YP_699739.1| peptidylprolyl isomerase [Clostridium perfringens SM101]
gi|123047143|sp|Q0SQ68|PRSA_CLOPS RecName: Full=Foldase protein prsA; Flags: Precursor
gi|110684336|gb|ABG87706.1| putative foldase protein PrsA [Clostridium perfringens SM101]
Length = 342
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/336 (16%), Positives = 105/336 (31%), Gaps = 44/336 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LL 63
S+ + ++ +V A+ T+NGE IT G++ +
Sbjct: 1 MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFT 60
Query: 64 KLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
+++ G+ + + L+ E + E K I +N Q
Sbjct: 61 QMKSQYGDKYMDDPQVAQQILQQRQGILNSLVEEKILVVEANKENIVPSEEELNKKIEQ- 119
Query: 110 ARNTGLSAEDF-----SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
L E + ++ G ++ FK+YL Q I D ++ + E
Sbjct: 120 --QIKLYKEQYGEEGYKKAVESMGYNEDTFKEYLKNQFI-ADAAASNASKDIKVTDEEAQ 176
Query: 165 ANKQKMKN---ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ K + + L R +LF +N+ QK + + + K E
Sbjct: 177 KYYDENKKQFEVQAKGVLARHLLF-------ENEEEAQKAYDEIQSGKTTFNDLFTKYEN 229
Query: 222 -FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG 279
K ++ + + +F LK + + P TQ G I + G
Sbjct: 230 NKLEKKTPIAESFVVPDENAQVAKEFVEGLKSLKEGEISKPIKTQFGYHIIQAGATYEKG 289
Query: 280 GEIALK-------AYLSAQNTPTKIEKHEAEYVKKL 308
++ L Q K++ ++ K L
Sbjct: 290 AQLPFNEVKSQIIQILKQQKDSQKLKSDMDQWKKDL 325
>gi|225181417|ref|ZP_03734860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiobacter
alkaliphilus AHT 1]
gi|225167815|gb|EEG76623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiobacter
alkaliphilus AHT 1]
Length = 319
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 86/251 (34%), Gaps = 23/251 (9%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELIVETLKK 87
++ +NGE IT ++ + +L L ++ G +E + ++ + +
Sbjct: 31 AANTVANVNGEEITRAELDAYMNVLALFMPELQQMLESEELRGMIEGEILSVMVQNVVVE 90
Query: 88 QEIEKSGITFDSNTVNYFFVQH-ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
Q + G++ + + + A G+S EDF L + I + KQ L
Sbjct: 91 QAAKDLGLSVSDEELQAEYEEFRAMMGGMSDEDFQEVLKEYDINEEDLKQSLRADVYVDK 150
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + F + +++ ++ + +LF + L+ + + +D
Sbjct: 151 L-EQHFASDITDEDIQAFIDENPSFGRQPATLELSHILFDEEEEALEARERI-LAGEDFG 208
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-----KSQNNTTNPY 261
+ + L +D + G + D + + ++ + P
Sbjct: 209 DLAVELSQDPTAQNEGHPGYR----GYLGDNIAEDTQDFWSDFMEGANNISEDGEVSPPV 264
Query: 262 VTQKGVEYIAI 272
TQ G I +
Sbjct: 265 ETQGGWHLIKL 275
>gi|121591689|ref|ZP_01678920.1| chaperone SurA [Vibrio cholerae 2740-80]
gi|121546451|gb|EAX56679.1| chaperone SurA [Vibrio cholerae 2740-80]
Length = 133
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+KL + ++ + ++ + +N VI D+ + +K
Sbjct: 1 MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQ 60
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +++LI++TL++QE ++ G+ D N +N + A+N + E + +
Sbjct: 61 PLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASV 120
Query: 125 DKQ 127
++
Sbjct: 121 AQE 123
>gi|90422049|ref|YP_530419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
gi|90104063|gb|ABD86100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
Length = 310
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 90/307 (29%), Gaps = 51/307 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGE 71
+ C++ + + +NG+ I D++ L Q
Sbjct: 13 RFGLACAALTGCLLLAGLPARAQDADPVLAKVNGQEIRQSDVAIAEEELGPSLAQMDPAT 72
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIG 130
+ LI + + E I F + A L ++ + K
Sbjct: 73 KTDNVLSFLIDLKIVAKAAEDKKI----ADREDFKAKLAFARNRLLMDNLLAVEGKAATT 128
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
D K+ + A KQ E R +L D
Sbjct: 129 DAAMKK------------------------VYDDAAKQI---TGETEVRARHILVETEDE 161
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
+ ++K D +L K SK S G + + + P+F ++
Sbjct: 162 AKAIEDELKK------------GADFAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSSV 209
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++P +Q G I + +KR+ + + T+ K +A+YV KL
Sbjct: 210 AFALEPGKISDPVKSQFGWHIIKVEEKRNRKAPDFAQVKAQIETYVTR--KAQADYVTKL 267
Query: 309 RSNAIIH 315
R A I
Sbjct: 268 RETAKIE 274
>gi|187917986|ref|YP_001883549.1| basic membrane protein [Borrelia hermsii DAH]
gi|119860834|gb|AAX16629.1| basic membrane protein [Borrelia hermsii DAH]
Length = 344
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/327 (17%), Positives = 112/327 (34%), Gaps = 36/327 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTI--NGEVITDGDISKRIALLKLQKI---NGELEKIAV 77
+ F + IV S+A ++ + + E+IT + ++ LK + + K +
Sbjct: 13 LCFLLFFIVGITSFAQNTPVVIINLHSNEIITKTEFDSKVNTLKKTQGRDLSNAERKQVL 72
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF--- 134
Q LI + L QE K GI V L+ E ++ QG N
Sbjct: 73 QILIADVLFGQEALKQGIKVGDEEVMQTIRAQFGLASLTDEQIRQMIESQGTNWNELLSS 132
Query: 135 -KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNK 191
K+ L+ Q + + + F E E+ K K + I V FS D K
Sbjct: 133 MKRSLSAQKLILKMAQPKFSEIKTPSEKEVIEYYEANKTKFVNPDISRISHVFFSSKDKK 192
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA----SKIHDVSIGKAQY---LLESDLHP 244
+ K A + + + + K++ SK + +G ++ L
Sbjct: 193 --RSEILTKAKDIANQIKSKKITFEEAVRKYSNDEGSKAKNGDLGFLARGDQNAQNVLGL 250
Query: 245 QF-QNLLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLSAQN 292
F + + ++ + + P +++G + + DK + +K +
Sbjct: 251 DFIKEVFMLNKGDISQPISSKEGFHIVKVTEMYSQRFLGLQDKISPNVNMTVKDAIKNNM 310
Query: 293 TPTKIEKHEAEYVKK----LRSNAIIH 315
++ A ++ L +A I
Sbjct: 311 VNIHQQQIVARVQQEIYDKLNKSASIQ 337
>gi|325279465|ref|YP_004252007.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324311274|gb|ADY31827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 445
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 98/288 (34%), Gaps = 25/288 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI-----NGELEKIAVQELIVETLKKQEIEKSG 94
+I + E+I DI A L+ Q + + + +++ +V+ L + +
Sbjct: 25 DKIVAIVGDEIILQSDIEN--AFLQQQGQGIISSSPDYKAEILEQQLVQKLLMAQAQIDS 82
Query: 95 ITFDSNTVNYFFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI---QSIWPDVV 148
I V + + S E + G K + + + + +
Sbjct: 83 IIVSDEEVENAVSSQIEFFISNIGSQERLEKYF---GKSIQEIKDDMRNPLKEQLITEQM 139
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVRE----YLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + K E+ + +K+ ++ + Y ++ ++ PD + ++++++
Sbjct: 140 QQKIVEKIRITPSEVRSYFKKIPKDSLPDMPDRYELQQIVLK-PDVSEAEKERIREQLRS 198
Query: 205 AEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262
+ L+ K N L S+ G+ Y + +L P F +
Sbjct: 199 FRDQILKGEKTFNTLAVLYSEDASAPRGGELGYKSKKELDPAFAEAAFSLKPGKISKIIE 258
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
++ G I + D R L + + T+ ++ + +R
Sbjct: 259 SEYGFHIIQLID-RQGEKINVRHIILQPKVSDTEKQEALNR-LDTIRQ 304
>gi|46397002|sp|Q97E99|PRSA_CLOAB RecName: Full=Foldase protein prsA; Flags: Precursor
gi|325510620|gb|ADZ22256.1| peptidylprolyl isomerase [Clostridium acetobutylicum EA 2018]
Length = 333
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/333 (17%), Positives = 116/333 (34%), Gaps = 40/333 (12%)
Query: 13 IKLLTTYFVLIIFCI----VPIVSYKSWAMSSRIRTTINGE-VITDGDISKRIA--LLKL 65
K + T ++ +F +V + A++S++ TI G IT G+I K + +L
Sbjct: 4 AKQIATALLVGMFTFSAVGCSMVEKRPEAINSKVVATIYGNQTITRGEIDKLAKGTVEQL 63
Query: 66 QKINGEL--------------EKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFV 107
+ G+ ++ + LI + + ++ + IT + V+ +
Sbjct: 64 KSQYGDSYEKNEEAVAALKKQKEQILTSLIDQKIFLKKAKDQKITLTKDEIKTNVDDVYA 123
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
Q+ + + +F S L + G FK L ++I +++ + + E
Sbjct: 124 QYQQEFK-TESEFKSQLSQYGYTVAEFKDQLKNRAISNKLIQ-QVVKDVKVSDDEAKKYY 181
Query: 168 QKMKNITVRE---YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
KN + + +L V+ RI E+ ++ S
Sbjct: 182 DSHKNSYTQSPNTVHLAHILVKTEK----EAKAVKARIDKGED----FATVAKQVSTDGS 233
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEI 282
K +G Q + LK + N + P TQ G I K + +
Sbjct: 234 KEKGGDLGDIQENDSNYDKTFMAAALKLNDNQVSAPVHTQFGWHVIKCIKKTEYPVKDFN 293
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++K + TK + + +KK S A I
Sbjct: 294 SVKDDIKQTVLSTKQKSVYQKTLKKWESQANID 326
>gi|254476741|ref|ZP_05090127.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. R11]
gi|214030984|gb|EEB71819.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. R11]
Length = 283
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 100/297 (33%), Gaps = 46/297 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ + + + + + I T+NGE IT G + IA L + +L + +
Sbjct: 11 LALATALTLPLQATAAPHADTIVATVNGEEITIGHMI--IARATLPQQYQQLPDDVLFDA 68
Query: 81 IVETLKKQEIEKSGITFD-SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I++ L +Q K + + V + L+A+ ++ +
Sbjct: 69 ILDQLIQQTALKQQLNGEVPKYVELSLEN-ESRSLLAADVIEKVMENAATEEE------- 120
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
V+ + +Y + E+ +L ++ + + ++
Sbjct: 121 --------VRAAYEEQYSDGN-------------GGDEFNASHILVESEEDAEEIRAELE 159
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
+ A +R R ++ + G+ + + + P+F+ ++ S +
Sbjct: 160 EGADFATTARER-----------STGPSGPNGGELGWFTKGRMVPEFEEAVIALSAGEIS 208
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + ++R A + Q E+ E V+ L + A I
Sbjct: 209 APVQTQFGWHVIKLNERRKSAA--PEFAEIRDQLAAQIREEAVEESVRTLTTEAEIE 263
>gi|325479565|gb|EGC82661.1| putative peptidylprolyl isomerase PrsA2 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 354
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 102/279 (36%), Gaps = 25/279 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ ++GE I+ D ++ + +L+ V ++ + L +I+K+ I D
Sbjct: 49 DKTVAIVDGEKISKDDYKSELSFYASMLASQQQLKNSIVTMMVQDKLIANDIKKNDIKVD 108
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V +Q +N G E+F LD + + FK+ L ++ + F
Sbjct: 109 DKEVEDALMQSVQNFGGQ-ENFDKTLDDYNMELDKFKETLKKDLMYKKH-REWFDENNKV 166
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+ EI + K+ + +L ++ + ++RL +D
Sbjct: 167 TDDEIKKYFEDNKDEFAKV-DASHILVE------------DEQTANDIKARLDNGEDFAS 213
Query: 219 LEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
L K SK + G + + +F++ + + P +Q G I +
Sbjct: 214 LAKEYSKDTASAQNGGALGAFAKGQMVKEFEDAAFSMKEGEISAPVKSQFGYHIIKVNSI 273
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+D + K ++ + K A+Y+KKL + +
Sbjct: 274 KDSFEDS--KEEITKKIKDQKY----ADYIKKLHEESNV 306
>gi|207723563|ref|YP_002253962.1| isomerase rotamase protein [Ralstonia solanacearum MolK2]
gi|207743079|ref|YP_002259471.1| isomerase rotamase protein [Ralstonia solanacearum IPO1609]
gi|206588764|emb|CAQ35727.1| isomerase rotamase protein [Ralstonia solanacearum MolK2]
gi|206594476|emb|CAQ61403.1| isomerase rotamase protein [Ralstonia solanacearum IPO1609]
Length = 243
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 82/279 (29%), Gaps = 48/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NG I + I Q + EL A L+ L +Q+ K G+ + V
Sbjct: 5 AAVVNGHAIPSAKVDALIKKSG-QPDSPELRNRARDMLVDRELIEQDAAKRGL-LGRDDV 62
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEM 161
Q AR L A +F ++ ++ KQY
Sbjct: 63 QEQLAQ-ARLNVLVAAEFEDYVKNSPTTEDELHKQY------------------------ 97
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
K K + +EY +L D + + + K + + +K
Sbjct: 98 ----EKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGGNFEEIAKAQSKDKG-- 148
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQKGVEYIAICDKRDLG 279
+ G + P+F L + T P TQ G I + D RD
Sbjct: 149 -----SGANGGDLDWANPGTYVPEFSAALTGLKKGEITLTPVKTQFGWHVIRLDDTRDAK 203
Query: 280 G---EIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
E L ++ + +K LR A I
Sbjct: 204 IPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATI 242
>gi|320162050|ref|YP_004175275.1| hypothetical protein ANT_26490 [Anaerolinea thermophila UNI-1]
gi|319995904|dbj|BAJ64675.1| hypothetical protein ANT_26490 [Anaerolinea thermophila UNI-1]
Length = 303
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 88/302 (29%), Gaps = 57/302 (18%)
Query: 28 VPIVSYKSWAMS-SRIRTTINGE--VITDGD-----ISKRIALLKLQKINGELEKIAVQE 79
+P + S + + +NGE + + + + + A + L E ++ + +
Sbjct: 41 LPPTAVPSPTPTPQPLVLVVNGEGVPLAEYEASLKQLQEAQAQMGLTSTPEEQRRMVLDD 100
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI TL Q K G T D + A + G+SA +++ + G + F+ L
Sbjct: 101 LIAATLLAQAAFKEGFTLDDAALEEQIAALAEQRGGMSALQ--NWMTRMGYDEVSFRSAL 158
Query: 139 AIQSI---WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
D + + + R +L P+ Q
Sbjct: 159 RRSLAAAWMRDTIAAQVPER-------------------AEQVHARQILLMTPETAQQ-- 197
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL--HPQFQNLLKKS 253
+ + A + L + G + L +
Sbjct: 198 -VLNQIRAGANFATLAF------------GYDLTTGGDLGWFPRGYLTQPAVEEAAFALQ 244
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ T+ G + + ++ LS T K ++++ R+ A
Sbjct: 245 PGEVSEIIQTELGYHILQVLERET-------DRLLSPDARLTLQRKALEAWLQQARTQAQ 297
Query: 314 IH 315
I
Sbjct: 298 IE 299
>gi|298504157|gb|ADI82880.1| peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
[Geobacter sulfurreducens KN400]
Length = 313
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/317 (13%), Positives = 99/317 (31%), Gaps = 55/317 (17%)
Query: 12 FIKLLTTYFVLIIFC-----IVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIAL 62
+ +L+ L + + ++ +NG+ IT + ++
Sbjct: 6 IVTILSVSLCLAALGGCKGKTESGTTAAPAKKAGQVLVEVNGDAITVENFNKELEGLPPY 65
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
LK E +K + ++V L Q+ +K G+ + A
Sbjct: 66 LKPMADTPEGKKELLDTMVVRELLYQQAKKDGVDKS--------AEIADR---------- 107
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLI 180
K+ + ++ +K + + E+ ++ K K + +
Sbjct: 108 --------VEELKKRVVVE----AYLKKKVEEQVQVSDEELKKFYDQNKDKFKSGAQIKA 155
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L ++ Q V++ A L + G + +
Sbjct: 156 SHILV---RDEKLAQEIVKELKGGANFEELAKKHSIDSAA--------AKGGDLGWFSKG 204
Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKI 297
++ P+F+ + + T+ TQ G I + KR G +K + A P K
Sbjct: 205 NMVPEFEKVAFGLKEGETSGIVRTQFGYHIIKVTGKRPAGERTFEEVKDQIKAAVLPGKQ 264
Query: 298 EKHEAEYVKKLRSNAII 314
++ + + ++ A I
Sbjct: 265 QEVFQKLKEDIKKGATI 281
>gi|39995127|ref|NP_951078.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Geobacter sulfurreducens PCA]
gi|39981889|gb|AAR33351.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA]
Length = 313
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/317 (13%), Positives = 99/317 (31%), Gaps = 55/317 (17%)
Query: 12 FIKLLTTYFVLIIFC-----IVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIAL 62
+ +L+ L + + ++ +NG+ IT + ++
Sbjct: 6 IVTILSVSLCLAALGGCKGKTESGTTAAPAKKAGQVLVEVNGDAITVENFNKELEGLPPY 65
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
LK E +K + ++V L Q+ +K G+ + A
Sbjct: 66 LKPMADTPEGKKELLDTMVVRELLYQQAKKDGVDKS--------AEIADR---------- 107
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLI 180
K+ + ++ +K + + E+ ++ K K + +
Sbjct: 108 --------VEELKKRVVVE----AYLKKKVEEQVQVSDEELKKFYDQNKDKFKSGAQIKA 155
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L ++ Q V++ A L + G + +
Sbjct: 156 SHILV---RDEKLAQEIVKELKGGANFEELAKKHSIDSAA--------AKGGDLGWFSKG 204
Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKI 297
++ P+F+ + + T+ TQ G I + KR G +K + A P K
Sbjct: 205 NMVPEFEKVAFGLKEGETSGIVRTQFGYHIIKVTGKRPAGERTFEEVKDQIKAAVLPGKQ 264
Query: 298 EKHEAEYVKKLRSNAII 314
++ + + ++ A I
Sbjct: 265 QEVFQKLKEDIKKGATI 281
>gi|77917708|ref|YP_355523.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus
DSM 2380]
gi|77543791|gb|ABA87353.1| parvulin-like peptidyl-prolyl isomerase [Pelobacter carbinolicus
DSM 2380]
Length = 307
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 18/249 (7%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + + + I L E + ++ + H + DF L QG+
Sbjct: 66 LRRSYLAQRIDHELLLAEATRRKLSVTPAELQQAIASHLDR--YPSGDFERMLADQGLAV 123
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+++ L Q + V+ K + EI A + R ++ ++PD
Sbjct: 124 EDWQRLLQEQLLVEKVLALMVRDKVDIADEEINAYFAAHRQSFARPEQVKARQITVPDEA 183
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNL 249
Q R ++ + S D G ++ F + +
Sbjct: 184 QGRQALEMLRQ----------GTPFAEVARRCSISPDADQGGDMGTFARGEMPEAFDKAV 233
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + G + R + + + AQ + E+ ++++
Sbjct: 234 FGLPAGRISDLTESDYGYHIFLVEQHLPARPPDLDTV-RGEIVAQLRKQQEEQLYQDWLQ 292
Query: 307 KLRSNAIIH 315
LR A I
Sbjct: 293 SLRQEAAIE 301
>gi|223936140|ref|ZP_03628054.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514]
gi|223895362|gb|EEF61809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514]
Length = 350
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/325 (11%), Positives = 102/325 (31%), Gaps = 22/325 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDIS----KRIALLKL 65
I + + +L + + + A + IR + +IT + + ++
Sbjct: 27 IYRMRFFCILTLTGLSFCSAMCLNARAELVNGIRAIVADSIITYQQVELLVGRDADFIRH 86
Query: 66 QKINGELEKI---------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
Q N E + LI L + + SG ++ +
Sbjct: 87 QYQNNPQEYQLRMVDLMGKGLTNLIQRELVLHDFQNSGFNVPETIIDEIVQDRIKEKYSD 146
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY-GNLEMEIPANKQKMKNITV 175
+ L K+G+ FK+ + I+ ++ + + ++E + +
Sbjct: 147 RVQLTKQLQKEGLTFEQFKKQIRDDLIYREMYRKNVPETIMSPHKIETFYQEHQADFKVA 206
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
E R ++ + P + +G +KR ++ ++ G A
Sbjct: 207 DEIKTRIIVLNKPADDT--EGSTKKRAQEIISQLKNGAAFSEMASVYSEGSTRAQGGDAG 264
Query: 236 YL-LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQN 292
+ L P + + K T+ T + + D+R + ++ +
Sbjct: 265 WQETSVVLKPIAEAVSKLKSGEYTDVIETPTACFLVLLEDRRPAHVKPLRDVQDDIERTL 324
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317
T + + +++ ++ + ++
Sbjct: 325 TAQENFRLYRKWIDRIEKKTFVRFF 349
>gi|187477572|ref|YP_785596.1| protein foldase [Bordetella avium 197N]
gi|115422158|emb|CAJ48682.1| putative protein foldase [Bordetella avium 197N]
Length = 258
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 90/278 (32%), Gaps = 46/278 (16%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
T+NG+ I+ + + LL Q L QE+I + Q EK GI
Sbjct: 22 VATVNGKAISQKSVDDFVKLLVTQGATDSPQLRDQVKQEMINRQVFVQAAEKQGIA---K 78
Query: 101 TVNYFFV-QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V+ + AR L + +L K + D K
Sbjct: 79 QVDTQTEIELARQGILVRALMADYLKKHPVTDAEVKA----------------------- 115
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E E +Q K +EY +R +L ++ E++ + KD
Sbjct: 116 EYEKIKKEQAGK----QEYDVRHILVEDEKTANDLLAQIKSGKLKFEDAAKKYSKDPGSA 171
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRD 277
E+ G + S+ P F + + K + + P TQ G I D R
Sbjct: 172 ER---------GGDLGWAPASNYVPPFADAITKLKKGEIADKPVQTQFGWHIIQEKDARA 222
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ E + +Q ++ + K+LR A +
Sbjct: 223 V--EFPPLDQVRSQLEEMMRQQKLNAFQKELREKAKVQ 258
>gi|323700040|ref|ZP_08111952.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio sp.
ND132]
gi|323459972|gb|EGB15837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
desulfuricans ND132]
Length = 633
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 115/390 (29%), Gaps = 97/390 (24%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIA------- 61
+K+L +++ + S T+NG+ IT + +R A
Sbjct: 13 IVKILFAIIIIVFVFAFGMSGLNS--SGDPTVATVNGQAITRAEYEAMYQRAAENLRRTN 70
Query: 62 --LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-----ARNT- 113
L Q + E +++ + ELI + L E K GI V A
Sbjct: 71 PDLPPAQTRSPEFKQMVLGELISQKLLLGEAAKLGIRASDKEVAAGIGAVDAFKDANGNF 130
Query: 114 ------------GLSAEDF----------SSFLDKQGIGDNHFKQYLAIQSIWP------ 145
++ DF D G+ + + W
Sbjct: 131 DQQRYQTALRDIRMTPGDFEENYRRDLTMEKVKDAVGVPADLSESQARQIFDWLGETAAI 190
Query: 146 ---DVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIP------------ 188
+V+ DF + E EI A Q ++ + +RT+ F+
Sbjct: 191 DYIEVLPTDFRNEIKIGETEIEAYYQANQDRFQIPAQVTLRTLAFTPASLAKFQTVTDDE 250
Query: 189 --------DNKLQNQGFVQKR-----------IKDAEESRLRL------PKDCNKLEKFA 223
+ L+ V R D E+++ R+ K + A
Sbjct: 251 IKAYYAANKDSLEEPAQVHARHILVAVKESDSQADQEKAKARIDKLYQEAKAGADFAELA 310
Query: 224 SKIHDV----SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
K D + G + + + P F+ ++ + P TQ G I + DK++
Sbjct: 311 KKNSDGPSAPNGGDLGWFGKGAMIPDFEKAAFALNKGGVSEPVRTQFGWHIIMVEDKKEG 370
Query: 279 GGEI--ALKAYLSAQNTPTKIEKHEAEYVK 306
+ K + A+ K + +
Sbjct: 371 TTKTFDEAKDEIKARLAEEKASDQANDLLD 400
>gi|253996058|ref|YP_003048122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera
mobilis JLW8]
gi|253982737|gb|ACT47595.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera
mobilis JLW8]
Length = 262
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 92/296 (31%), Gaps = 52/296 (17%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQELIVET 84
V ++S A ++ T+NG+ + D+ + QKI+ + + EL+
Sbjct: 9 AVAVLSMTPSAFAADALATVNGKPVKQSLYDVIVKDVTANGQKIDANTKAAIIDELVSSE 68
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L QE ++ G+ +Y + + L F
Sbjct: 69 LVYQEAQRLGL---DKQADYVAREELGSRKLLTSMFLQ---------------------- 103
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIK 203
D++ K+ + + A +K K +EY R +L + K
Sbjct: 104 ------DYVKKHPVSDADTKAAYEKYKTAYGDKEYSARHILVKTEAEAKDIIAQLGK--- 154
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQNNTTN-- 259
D K+ K S G + + + F +++ Q T+
Sbjct: 155 ---------GGDFAKIAKEKSLDPGSKEKGGDLGWFSPATMVKPFSDVVANLQKGATSAS 205
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + D R K Q + + + + LR+ A I
Sbjct: 206 PVQTQFGWHVIKLVDTRPAQPLPYEKLKDGIQKNLQQH--NLEKLMSDLRAKAKID 259
>gi|110598304|ref|ZP_01386579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
ferrooxidans DSM 13031]
gi|110340112|gb|EAT58612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
ferrooxidans DSM 13031]
Length = 438
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 92/281 (32%), Gaps = 23/281 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----IN 69
K+ +L + + I + ++ RI + EVI +I R + +LQ +
Sbjct: 3 KISGKAVLLFLAGLASITTPSYAEVADRIVAVVGREVILKSEIDSRALMARLQSPELAKD 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--------VQHARNTGLSAEDFS 121
L + + LI + + + + + D N ++ + A + F
Sbjct: 63 TGLSRRILDGLIEQQIILSKAKIDSVKVDENAISATAGDRFKQLRARFASKEEMET-RFG 121
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKND-FMLKYGNLEMEIPANKQKMKNITVRE-YL 179
L + + + Q + + + +K + E+ N + K + E
Sbjct: 122 KTLPAI---RDEIRTEIRNQELIQTLRRKRSAGVKVTSGEVMDYYNANREKFSLIPEGVK 178
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+ ++ + + K +E + D L + S+ + G Y+
Sbjct: 179 VSQIMKYPAVSADAQLQALTKIQAVRKELQG--GADFALLARKYSQDPGSARLGGDLGYV 236
Query: 238 LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ L P F+ + + T+ G I + +K
Sbjct: 237 QKGALIPSFETAAFSLKEGEVSGIIETRYGYHIIQLLNKEP 277
>gi|302338942|ref|YP_003804148.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
smaragdinae DSM 11293]
gi|301636127|gb|ADK81554.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
smaragdinae DSM 11293]
Length = 358
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/345 (14%), Positives = 115/345 (33%), Gaps = 46/345 (13%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKINGEL--- 72
VL++F + +V S + + T+ E I+ + +RIA + + L
Sbjct: 14 GVVLVLFFLCGVVFPVSADLVGQTVATVTLTKTEGISSVQLDQRIAQVAAARKKAGLSAD 73
Query: 73 ---EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTG--LSAEDFSSF 123
+ +I E L KQ E+SGI+ + + + G L+ +
Sbjct: 74 GVDRTEVLDAMIAEVLIKQAAERSGISIPQEQIQQVVAKQKASIEQQVGRPLTDRQYQEV 133
Query: 124 LD-KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-----MKNITVRE 177
+ + G +K + Q + + + + ++ Q +IT E
Sbjct: 134 VRSQTGFSWEQYKGSIREQIMQQRYIATEKRDMFEAIQPPTEKEIQDHYDAHATSITNPE 193
Query: 178 YL-IRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKL-EKFASKIHDVSI 231
Y+ ++ + Q + ++R++ A + + E +SK +
Sbjct: 194 YVRLKQIFIPTISMNDQEKQAARERLESAWTKLRNGSAKFDDLVLQYSEDESSKYRGGDV 253
Query: 232 GKAQY---LLESDLHPQ-FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL--------- 278
G +E F+ L + + + G+ + + + R+
Sbjct: 254 GYIARADQRVEKTYGADFFRKLFSLQTGDYSGVIESNVGLHILKVTEHREARILSLDDQI 313
Query: 279 --GGEIALKAYLSAQNTPTKIEKHEAEYVK----KLRSNAIIHYY 317
++ ++ Y+ A K + + + L++ A I Y
Sbjct: 314 APDNKMTVREYIRAGLFQEKQQAVLKKALDAVVEDLKAEAEIVVY 358
>gi|94677050|ref|YP_588994.1| peptidylprolyl cis-trans isomerase SurA [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|122070619|sp|Q1LSS0|SURA_BAUCH RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|94220200|gb|ABF14359.1| peptidylprolyl cis-trans isomerase SurA [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 433
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 89/252 (35%), Gaps = 10/252 (3%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQKINGE--LEKIAVQELIV 82
+ + ++ +N ++I + ++ + A L Q+ + L K + LI+
Sbjct: 21 CAIAEPNLIDQVVAIVNNDIILESELKILRDSIQNYAKLNYQEQLEDNQLNKHIIDRLII 80
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ + +Q+ + S IT +N + LS + + ++ L
Sbjct: 81 KKIIQQQAKLSHITIAETKLNKIIHDLTSSQNLSIAKLRHLMYSNRNIYDIYRAQLRQDL 140
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ +V+ + + L E+ +K+ + + +L +P+ + Q + +
Sbjct: 141 LIAEVLNSALHRRITILPQEVEFLAKKIAIRKNTTFNLSHMLIPLPEKPSRKQKNEAEAL 200
Query: 203 KDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
++ D +L K+++ ++ + + L L + + P
Sbjct: 201 ALFLMAQSEKQNDFRELAIKYSTDTQMLNSFSMIGIQHTKLPLILAKHLYGAQKGSVIGP 260
Query: 261 YVTQKGVEYIAI 272
+ G+ + +
Sbjct: 261 IYSDIGIHILKV 272
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 6/148 (4%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQK--RIKDAEESRLRLPKDCNKLEKFASKIH 227
M NI + E R +L + NQ VQ + + ++ + I
Sbjct: 280 MSNIPITEVYARHILLRTSVKRNDNQARVQLLNIARKINIGDISFSIVAKQISE--DIIS 337
Query: 228 DVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
G + + P F+ LL ++ + P + +G I + + R + +A
Sbjct: 338 SQQGGDLGWNALNAFTPTFRKLLLSLNKGQLSIPVRSSQGWHLIQLQNIRQVENTTNKEA 397
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K+ + ++++ R A I
Sbjct: 398 AYRI-LWHRKLAEIAHIWIQEQRDLAYI 424
>gi|291278662|ref|YP_003495497.1| hypothetical protein DEFDS_0230 [Deferribacter desulfuricans SSM1]
gi|290753364|dbj|BAI79741.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 329
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 21/251 (8%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L ++ + E I L +++K+ + S +N + + + F
Sbjct: 77 NKDNLTQLFINEFIKFQLLLSDVKKNNVKVSSEKLNSIMNKI---EKIGEDSFVIDFP-- 131
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLF 185
I +K+ L I + + E E+ K+ ++ +Y + ++
Sbjct: 132 -ISLEEYKKLLKESLIVKEWLNRLIEKNITVSEDEVKNKYNKIDKTKKSIVKYHVLHIV- 189
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + R LR K++ G Y++ D+
Sbjct: 190 -----TANYKDALNARRAL-----LRGKSFKEVALKYSVGPEKDQGGDLGYIVLDDMPVI 239
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAE 303
FQ + + + Y + G + DK+ G LK L + K+EK +
Sbjct: 240 FQKIKRLRIKRISPVYKSDYGYHIFQVLDKKKEVEVGYEVLKPRLYQEIFAEKVEKFIND 299
Query: 304 YVKKLRSNAII 314
YV+ L+ NA I
Sbjct: 300 YVEVLKKNAKI 310
>gi|312623037|ref|YP_004024650.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203504|gb|ADQ46831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 335
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/314 (18%), Positives = 108/314 (34%), Gaps = 35/314 (11%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIAL----- 62
+ + VL+I I + +R +NGE IT + I+ R +
Sbjct: 5 TKIVLFSIAAVVLLIILIAVTPEIVKYVDENRAVAIVNGEKITKKEFAINYRSQINYYGL 64
Query: 63 --LKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHAR 111
L + G+ +++ + LI+ ++ Q+ ++ I S ++ Q+ +
Sbjct: 65 DKTFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQAKRKNIALTSAEKKAIDQQIEQY-K 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ S +F +L G +N +K + Q + + K + E+E N
Sbjct: 124 SDSQSGAEFKQYLQTIGATENEYKDQVIKSQIVSKLYDEITKNQKATDAEIE---NYYSS 180
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-- 228
E +LF + N + K E L++ KD EK A K +
Sbjct: 181 HKSDFVEVKASHILFKV------NDSKEEATKKKKAEEVLQMIKDGQNFEKLAQKYSEDE 234
Query: 229 ---VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G Y + + +F++ + +N T G I + DK+ L
Sbjct: 235 TTKQKGGDLGYFRKGQMVKEFEDAAFSLNIGEISNIVKTSYGYHIIKVTDKKQLSLNEVK 294
Query: 285 KAYLSAQNTPTKIE 298
S + K E
Sbjct: 295 DEIKSTIESQKKDE 308
>gi|210623289|ref|ZP_03293706.1| hypothetical protein CLOHIR_01656 [Clostridium hiranonis DSM 13275]
gi|210153690|gb|EEA84696.1| hypothetical protein CLOHIR_01656 [Clostridium hiranonis DSM 13275]
Length = 333
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/325 (13%), Positives = 100/325 (30%), Gaps = 38/325 (11%)
Query: 25 FCIVPIVSYKSWAMSS----RIRTTINGEVIT--DGDISKRIALLKLQKINGELEK---- 74
+ ++S+ A +NG IT + ++ ++ G +K
Sbjct: 3 IALAALMSFSLVACKQKDLNETVADVNGTKITLGQYEFMLKMNKDSVESNIGGADKWDEK 62
Query: 75 -------------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ + ++I L Q EK G+ + + S E+
Sbjct: 63 DQTGVSYKDKYKRLVLDQMINTELLAQNAEKEGLKPTDKEIQASYNDLKTYVN-SDENLK 121
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLI 180
++ GI D K+ I + + F + + E+ + + E
Sbjct: 122 GAAEELGINDEFLKEQAKISLLIQKSQE-KFYKEEKVTDAEMKKYYDEHIDEYKKDEVEA 180
Query: 181 RTVLFSI---PDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKLEKFASKIHD--VSIGKA 234
+L + L + + K + + ++ D +L K S+ + G
Sbjct: 181 SHILIKTTDDQNKPLPEADQKKAKAKAKKVLKEVKAGGDFAELAKKYSQDPGSAANGGAL 240
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQN 292
+ + +F++ ++ T G I + D+ ++ KA + +
Sbjct: 241 GAFGKGMMVQEFEDAAFGMEPGEVSDLVKTDFGYHIIKVTDRIKETTSFEEAKAGIKEEI 300
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317
K + + L+ A I +
Sbjct: 301 LKNKYGEK----IAALQKKAKIEKF 321
>gi|146337720|ref|YP_001202768.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278]
gi|146190526|emb|CAL74525.1| putative Peptidylprolyl isomerase [Bradyrhizobium sp. ORS278]
Length = 274
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 92/294 (31%), Gaps = 51/294 (17%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVET 84
+ + ++ ++ + +NG I D++ L Q ++ + LI
Sbjct: 3 LLVAPARAADDANPVLAKVNGAEIRKSDVALAEEELGPSLAQMDPATKDENVLSFLIDMK 62
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L + E + F + A L + + K + K+
Sbjct: 63 LVSKAAEDKKV----AESEDFKKRLAFTRNRLLMDSLLASEGKAATTPDAMKK------- 111
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ A+KQ +E R +L D + + K
Sbjct: 112 -----------------VYEEASKQIGGE---QEVHARHILVETEDEAKAVKAELAK--- 148
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
D +L K SK S G + + + P+F N+ ++P
Sbjct: 149 ---------GADFAELAKKKSKDPGASDGGDLGFFTKEQMVPEFANVAFSMEPGKISDPV 199
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
TQ G I + +KR+ + + T+ K +A+YV KLR A I
Sbjct: 200 KTQFGWHIIKVEEKRNRKPPEFEQVKSQIETYVTR--KAQADYVGKLREAAKIE 251
>gi|182420001|ref|ZP_02951235.1| foldase protein PrsA [Clostridium butyricum 5521]
gi|237669545|ref|ZP_04529525.1| prsA family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376038|gb|EDT73625.1| foldase protein PrsA [Clostridium butyricum 5521]
gi|237654989|gb|EEP52549.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 343
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 90/295 (30%), Gaps = 27/295 (9%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQ 66
+ I ++ + + I ++ A+ + T+ E IT D+ + + +L+
Sbjct: 4 IKKLIAAVSIFTLSISVMGCKMIEKTPEAIQKTVYATVGDEKITKADMDEEMKATIDQLK 63
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ G+ ++ + ++ E L + E G+T + +N + +
Sbjct: 64 QQYGDDYANNEKIKDQLKQMKVQYLNAMVNEKLMLKNAESVGVTPTDDELNEYADKQIEQ 123
Query: 113 TGLSA---EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---N 166
+ L+ G ++ +K Y Q V + + + A
Sbjct: 124 LKQAYPDDAQLQQVLEANGFTEDSYKDYAKKQYKLQKVQEA-ITADVEVTDDDAKAYYDE 182
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-- 224
+ + +L + + + +++L D +L
Sbjct: 183 NKDSQYTVGAGANAAHILIAEKGSDGNIDFDASLAKANEVKAKLDAGADFAQLASEYGTD 242
Query: 225 --KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
K +G Y + + S+ ++P +Q G I +D
Sbjct: 243 GTKDKGGDLGFVAYNQANYDQDFLAGFKQLSEGQISDPIKSQFGYHIIKATGIKD 297
>gi|251772783|gb|EES53345.1| probable peptidyl-prolyl cis-trans isomerase [Leptospirillum
ferrodiazotrophum]
Length = 289
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/321 (15%), Positives = 99/321 (30%), Gaps = 56/321 (17%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M ++F + F + + L + + + S +S + + IT + I
Sbjct: 1 MNFRIFPTSGSFHRGM--ALPLTLLAGLSLTSGCHQTLSDNVVAKVGTREITKESLQSAI 58
Query: 61 ALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
+ L + + LI TL +E E+ G+ + + +
Sbjct: 59 KDMNLPSSAPASVPSDVLNRLIDNTLITEEAEQEGL-PNRPDIRKKLED--ARNRI---- 111
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
L + Q V + + +++ ++Q++K E
Sbjct: 112 LRQAL-------------IKTQ------VDDKVKVTDADVQGYFDKHRQEIKQPGYVEVR 152
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
IPD K ++ R K + F+ I G + E
Sbjct: 153 ----QLIIPDQKTADRIVSSLRKK----------------KGFSRAIEKFKGGPVGKIFE 192
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI----ALKAYLSAQNTP 294
+ PQF + T P + G+ Y I + + G++ KA ++ T
Sbjct: 193 GTVPPQFAKFFFGVPAGSVTGPIALKDGIHYFKI--DKQVPGKLLSFDQAKAGITQFLTS 250
Query: 295 TKIEKHEAEYVKKLRSNAIIH 315
+ +Y+ LR+ I
Sbjct: 251 RMKQDLYQKYLNSLRAKTKIE 271
>gi|222528654|ref|YP_002572536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
bescii DSM 6725]
gi|222455501|gb|ACM59763.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
bescii DSM 6725]
Length = 335
Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/310 (17%), Positives = 109/310 (35%), Gaps = 27/310 (8%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKR-------I 60
+ + VL+I I + +R +NGE IT + I+ R I
Sbjct: 5 TKIVLFSIAAVVLLIILIGVTPEIVKYVDENRAVAIVNGEKITKKEFAINYRSQINYYGI 64
Query: 61 ALLKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHAR 111
L + G+ +++ + LI+ ++ Q+ K IT S ++ Q+ +
Sbjct: 65 DKTFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQARKRNITLTSAEKKAIDQQIEQY-K 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
+ S +F +L G +N +K + I + + + E+ K
Sbjct: 124 SDSQSGAEFRQYLQTIGATENEYKDQVIKSKIVSKLYD-EITKNQKATDAEVENYYSSHK 182
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS- 230
+ V E +LF + D+K + + ++ ++ KL + S+ +
Sbjct: 183 SDFV-EVKASHILFKVNDSKEEAAKKKKAEEILQM---IKDGQNFEKLAQKYSEDENTKQ 238
Query: 231 -IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G Y + + +F++ + +N T G I + DK+ L
Sbjct: 239 KGGDLGYFRKGQMVKEFEDAAFSLNIGEISNIVKTSYGYHIIKVTDKKQLSLNEVKDEIK 298
Query: 289 SAQNTPTKIE 298
S + K E
Sbjct: 299 STIESQKKDE 308
>gi|89892936|ref|YP_516423.1| hypothetical protein DSY0190 [Desulfitobacterium hafniense Y51]
gi|219666202|ref|YP_002456637.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfitobacterium
hafniense DCB-2]
gi|89332384|dbj|BAE81979.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536462|gb|ACL18201.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfitobacterium
hafniense DCB-2]
Length = 315
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 105/327 (32%), Gaps = 43/327 (13%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR------------I 60
++ + + + + S A + +NGE IT+ D + R +
Sbjct: 1 MRSFRKGIIAALVLTLALTGCSS-AGGDQWAAKVNGETITEQDFAARVSNVQKAYEGMGM 59
Query: 61 ALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
Q +++ ++ +I L QE ++ + + ++ + G
Sbjct: 60 DFSTDQGKEALNQVKSQVLEAMIASRLVIQEAQRLKLDVNDPSILEQEKNIIQMVG-DES 118
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITV 175
+ +L +Q + ++ K Y A + + + N Q++
Sbjct: 119 QYQEWLKQQAMTEDEVKNYFA--------LSAEITKDVTVTPEQEKTFFENNQELYGGKG 170
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
E R +L D + + + A+ S L K + + S G
Sbjct: 171 EEVQARHILVETEDEA---KAIIAQLDGGADFSELAKEKSTDTGSQ-------SSGGYLG 220
Query: 236 YLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKR-DLGGEI-ALKAYLSAQ 291
+ + P+F+ + T P ++ G I + D + + A+K+ ++
Sbjct: 221 SFGKGKMVPEFEEAAFAQEVGTYTKTPVKSEFGYHIILVEDHKAATKADYEAVKSQVAED 280
Query: 292 NTPTKIEKHEAEYVKKLRS--NAIIHY 316
+ Y +LR A I Y
Sbjct: 281 ALADAKAQKFGGYFDELREKAKANIEY 307
>gi|114799826|ref|YP_761850.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Hyphomonas neptunium ATCC 15444]
gi|114740000|gb|ABI78125.1| PPIC-type PPIASE domain protein [Hyphomonas neptunium ATCC 15444]
Length = 303
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/313 (12%), Positives = 92/313 (29%), Gaps = 55/313 (17%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS------RIRTTINGEVITDGDISKRIALLKL---- 65
T + ++ + S + + + + T+NGE I D+ L
Sbjct: 8 FTAFCAVMAALTLAGCSQEGFQLEEPREVSREVAATVNGEAIYTADVEVEAVARGLVVSG 67
Query: 66 --QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ E K + +LI + L QE ++ G+ D A L
Sbjct: 68 ASLRAEDEAYKQVLDQLIDQKLMAQEAKRLGLEKDP----------AGMRRLEMAQ---- 113
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+ + + VV + + Q++ + E + +
Sbjct: 114 ------------ERIMGNLLVESVVAEQVTDEMIDRMYAEQVRLQQVND----EVSVAHI 157
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ + + V R++ E + N G ++ +DL
Sbjct: 158 V----TDTEEEAEAVWLRVQAGEAFESLVFNHSNDSATRMEN------GDLGFVSPNDLP 207
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ ++ + P+ + + + D+R + + + + +
Sbjct: 208 DPYPVVIANTPVGEVAPPFEAEGSWRIVKVKDRRTEPPKT--RDEMRPEIATFLTLSEVS 265
Query: 303 EYVKKLRSNAIIH 315
+++LR+ A I
Sbjct: 266 RILRRLRTEARIE 278
>gi|83816066|ref|YP_445916.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855]
gi|294507826|ref|YP_003571884.1| peptidyl-prolyl cis-trans isomerase surA [Salinibacter ruber M8]
gi|83757460|gb|ABC45573.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855]
gi|294344154|emb|CBH24932.1| Peptidyl-prolyl cis-trans isomerase surA [Salinibacter ruber M8]
Length = 464
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 97/295 (32%), Gaps = 23/295 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEI 90
++ + RI + E++ ++ + + Q+ + L A+++L+ + L ++
Sbjct: 37 QNAQVVDRIAAVVGDEIVLKSEVDQLVRRQTRQQNVSYSNSLWMEALRQLVDQKLLAEQA 96
Query: 91 EK-SGITFDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD-NHFKQYLAIQSIW 144
+ + IT + ++ Q+ G S E K + F++ L Q +
Sbjct: 97 RRDTTITVSDQQLSDQLDRRISQYVERAG-SEERLEQAYGKSILEIKEQFREDLRGQILS 155
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + E+ +++ ++ + L I + Q+
Sbjct: 156 QQLRRRRMQS-IDITPSEVRQWFEQIPQDSLPQLPKTVRLSHIVRYPKPTEASRQQAKSL 214
Query: 205 AEESRLRLPKDCNKLEKFASK-----IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
R + LE A + + G + +DL P+F + ++ +
Sbjct: 215 ITSVRDSIVNGGASLEAMARQFSAPDAAGTASGALTDVNLNDLVPEFAAVASRTPVGQIS 274
Query: 259 NPY--VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P+ +Q G + I D + + K EY+ +R
Sbjct: 275 QPFYNESQNGFHILRI----DAKDGSTVDLHHVLIKPNAPTGKRAKEYLSAVRDT 325
>gi|327438758|dbj|BAK15123.1| parvulin-like peptidyl-prolyl isomerase [Solibacillus silvestris
StLB046]
Length = 282
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 103/306 (33%), Gaps = 51/306 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEK 74
T F L + + + + + + T++ GDI++ ++ I G+ L++
Sbjct: 3 KTIFALTVAASIGLAACSNPGDEVVVSTSV-------GDITQEEFYNSMKDIAGDQLLQQ 55
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ V++++ + K + G S E + L + + +
Sbjct: 56 VVVEQILNDKYK----------VTDEEIEEELKGVKEQYGESYE---AVLAQSNLTEETL 102
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
K + +++ + + EI K N +E R +L ++
Sbjct: 103 KTNIRF-----TLLQEKALKDVEVTDEEIE----KYYNQASQELNARHILV-------ED 146
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQNLLKK 252
+ ++ + +D KL K S G + + P+F +
Sbjct: 147 EETAKEIKAKLDA-----GEDFAKLAKEFSTDPGSGAQGGDLGWFTVGTMVPEFNDAAYA 201
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY---VKKL 308
+ + + P ++ G I + +KRD+ K + I +A++ + +L
Sbjct: 202 LEIDEISEPVQSEHGFHIIQVTEKRDVKD--YGKLEDKKEEIRESIAATKADWNTKMAEL 259
Query: 309 RSNAII 314
A +
Sbjct: 260 IKEADV 265
>gi|224532128|ref|ZP_03672760.1| basic membrane protein [Borrelia valaisiana VS116]
gi|224511593|gb|EEF81999.1| basic membrane protein [Borrelia valaisiana VS116]
Length = 336
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 96/275 (34%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKINGEL-- 72
+ ++ LII V I S+ + I N E+IT ++ K Q + +
Sbjct: 1 MKSFLFLIILGTVGINSFAQNTPVAIINLYKN-EIITKTGFDSKVDIFKKTQGRDLTVAE 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+K +Q LI + L QE K GI + V L+ E ++KQG
Sbjct: 60 KKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNLTDEQIKQMIEKQGTNWG 119
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGN----LEMEIPA--NKQKMKNITVREYLIRTVLFS 186
+ +V K+ E EI K K + + V FS
Sbjct: 120 ELLSSMKRSLSSQKLVLKQAQPKFSEVKTPSEKEIIEYYEANKTKFVNPDIARVSHVFFS 179
Query: 187 IPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD--- 241
D K + + + ++ + K +SK + +G ++
Sbjct: 180 TKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNAQNL 239
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
L F + + ++ + ++P +++G I + +K
Sbjct: 240 LGADFMKEVFNFNKGDISSPIASKEGFHIIKVTEK 274
>gi|193214030|ref|YP_001995229.1| SurA domain [Chloroherpeton thalassium ATCC 35110]
gi|193087507|gb|ACF12782.1| SurA domain [Chloroherpeton thalassium ATCC 35110]
Length = 439
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 107/313 (34%), Gaps = 27/313 (8%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQKINGELE-- 73
+ +L + + S + A I + E I D+ A+L + L
Sbjct: 9 GFALLFMLALAGSFSKPASAQEMLDGIVAVVGDEAILKSDVD-NQAMLYAYQNQINLNTP 67
Query: 74 ---KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQG 128
K LI + + + + IT S V+ Q L ++ + ++ G
Sbjct: 68 GLWKEVFTALINQKILLMKAKLDSITVSSEEVDGLVEQRIAFLRERLRTDE--AIVETFG 125
Query: 129 IGDNH----FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQKMKNITVREYLIRT 182
+ ++ + Q + ++ + F + E + + E +
Sbjct: 126 KSIDMLRVDLREEIKSQRLVEELQRQHFSDLTVSNEEVVDFYNTYRDSLPEIPAEVEVAH 185
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLES 240
++ + L Q + + +E + KD +L + S+ + G ++
Sbjct: 186 IVIKPKTDSLSKQSALDAIQEVQKELQD--GKDFAELARAESQDPGSARLGGDLGFVKRG 243
Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ +F+ + +N + T+ G I + +++ GE ++ + TK+
Sbjct: 244 EFVRRFEEVAFGLKENQISGIVETEFGYHIIQLLERK---GEAIRVRHILKRFDKTKLND 300
Query: 300 HEA-EYVKKLRSN 311
A + + ++R N
Sbjct: 301 AAAIDQLNEIREN 313
>gi|255530403|ref|YP_003090775.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter heparinus
DSM 2366]
gi|255343387|gb|ACU02713.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter heparinus
DSM 2366]
Length = 455
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 105/302 (34%), Gaps = 26/302 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ F++ I ++ ++ ++ + +I D++++ A + +
Sbjct: 1 MKKIFLIASGFICLFLNAQAQKKNIDKVVAVLGSNIILLSDLNQQYAQFLNSGNTDDPKV 60
Query: 75 I--AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNTGLSAEDFSSFLDKQG 128
+Q+++ + L KQ+ E + D V+ + + G E FL++
Sbjct: 61 KCYILQQMLAQKLLKQQAEIDSVMVDDGQVDEEVEKRMRYQIQRAGGQ-ERLEQFLNR-- 117
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLK----YGNLEMEIPANKQKMKNITV----REYLI 180
+K + ++ N K +E+ + ++ E+ I
Sbjct: 118 -SVLQYKDEIRPDIK-EQLISNKMQAKITQDVSITPLEVKKYFDGYQKDSLPDIPTEFEI 175
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLL 238
++ K + Q + K DA R++ +D L K S+ G +
Sbjct: 176 GEIVMYPKLTKAEKQKYYDKI--DALRLRVKSGEDFAFLAKSYSEDPGSAADGGDLGFFD 233
Query: 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
+ + +F K + + T+ G + + ++R A + QNTP +
Sbjct: 234 RTRMVKEFTAWAFKLKPGEMSPVFETEHGFHILQVVERRGEQV-QARHILIRPQNTPASL 292
Query: 298 EK 299
++
Sbjct: 293 DR 294
>gi|75762890|ref|ZP_00742701.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228899846|ref|ZP_04064091.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 4222]
gi|74489622|gb|EAO53027.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228859750|gb|EEN04165.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 4222]
Length = 285
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 94/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T +T D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNESATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VSDEEVNKEVEKVKKQYG---DQFKKVLENNGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + +I + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKKSIRKNLEEERIADPIFSKKLLQEELKKANI 266
>gi|148258757|ref|YP_001243342.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. BTAi1]
gi|146410930|gb|ABQ39436.1| putative Peptidylprolyl isomerase [Bradyrhizobium sp. BTAi1]
Length = 274
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 90/294 (30%), Gaps = 51/294 (17%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVET 84
+ + ++ ++ + +NG I D++ L Q + + LI
Sbjct: 3 LLVAPARAADDANPVLAKVNGAEIRKSDVTLAEEELGPSLAQMDPATKDDNVLSFLIDMK 62
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L + E + F + A L + + K + K+
Sbjct: 63 LVAKAAEDKKV----ADSEEFKKRLAFTRNRLLMDSLLASEGKAATTPDAMKK------- 111
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ A+KQ +E R +L D + + K
Sbjct: 112 -----------------VYEEASKQIGGE---QEVHARHILVETEDEAKAVKAELAK--- 148
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
D +L K SK S G + + + P+F N+ ++P
Sbjct: 149 ---------GGDFAELAKKKSKDPGASDGGDLGFFTKEQMVPEFANVAFALEPGKISDPV 199
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
TQ G I + +KR+ + +Q K +A+YV KLR A I
Sbjct: 200 KTQFGWHIIKVEEKRNRK--PPEFDQVKSQIETYVTRKAQADYVSKLREAAKIE 251
>gi|145589158|ref|YP_001155755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047564|gb|ABP34191.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 263
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 104/313 (33%), Gaps = 65/313 (20%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL- 72
++ T + + + +NG+ I + L++
Sbjct: 5 QIFTASLISSALLYTTAFAQNA--------AIVNGKAIPKAQLD---KLVQKSGQPDNPQ 53
Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ L+ + L QE +K G+ + E LD+ +G
Sbjct: 54 VRNQGREMLVTKELILQEADKRGV-------------------IQKESVREQLDQARVG- 93
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI-TVREYLIRTVLFSIPDN 190
+ + +++ D V+ K G E ++ A +KN +EY + +L +
Sbjct: 94 ------ILVAAVFEDYVE-----KDGVSEADLQAAYDSVKNQYAGKEYHVEHILVEKEGD 142
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF-Q 247
A +++ + + K SK + G ++ E L P+F +
Sbjct: 143 ------------AKAIIVQVKSGGNFEDIAKTKSKDPGSAANGGDLGWVTEKALVPEFSK 190
Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA---- 302
++++ T+ P +Q G I + + RD + + + +
Sbjct: 191 SMVQLKNGQMTDKPVKSQFGWHVIKMVEVRDTKAPSYEELKPQLKQMIVSDQNWQKAKFS 250
Query: 303 EYVKKLRSNAIIH 315
E ++KLR+ A I
Sbjct: 251 EMMQKLRAKAKIQ 263
>gi|228990140|ref|ZP_04150111.1| Foldase protein prsA 1 [Bacillus pseudomycoides DSM 12442]
gi|228769579|gb|EEM18171.1| Foldase protein prsA 1 [Bacillus pseudomycoides DSM 12442]
Length = 281
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
++ +++ + S +I T+ G+ I+ D+ K++ K ++ +
Sbjct: 4 AMLALAATSLIALSACGSSDKIVTSKAGD-ISKEDLYKQM--------KDRAGKQILRGM 54
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
++E + + T D V+ + ++ + G + F + L +QG + FK+ +
Sbjct: 55 VLEKVLLK-----NHTVDDKEVDKKYDEYKKQLG---DQFDAALKQQGFTKDSFKESVRA 106
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + + E+ K E +L ++ +K
Sbjct: 107 ELAMDKAI------ESSITDKEL-------KENYKPEIKASHILVK-------DEATAKK 146
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++ + K +L K S+ + G Y + +F + K ++
Sbjct: 147 VKEELGQ-----GKSFEELAKQYSEDKGSAEKGGDLGYFGPGKMVKEFSDAAYKLKKDEV 201
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P +Q G I + D ++ KA + K + + ++ +L+
Sbjct: 202 SEPVKSQFGYHIIKVTDIKEQKSFEEEKANIKKGLVEKKKQDPQ--FMAELQDK 253
>gi|297545519|ref|YP_003677821.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843294|gb|ADH61810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 301
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/324 (15%), Positives = 93/324 (28%), Gaps = 54/324 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ LI+ + S + + T+NGE IT+ + K +K Q +
Sbjct: 1 MKRKIALILSFGFIVFLLVSCSAKKEVVATVNGENITNAEYRKAFDQVKAQIESSPQYTK 60
Query: 72 ---------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+++ + LI + L QE K+ IT + + +
Sbjct: 61 DIWNQDYEGKKFLDVVKENVLDSLIAQKLLLQEALKNNITVSDKEIEEEYQR-------- 112
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
++F+ I K YL I ++ + + E E+ + K+
Sbjct: 113 EKEFNK-----DITKEDVKNYLLINKLFEE-----YTKDVKITEEELKKYYEDNKDQFET 162
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKA 234
+L ++ Q RL +D L K S G
Sbjct: 163 V-KASHILV-------SDEKIAQDIYN-----RLMKGEDFATLAKEYSIDTATKDQGGDL 209
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ P+F+ + + + P T G I + +
Sbjct: 210 GEFARGVMVPEFEQVAFSLKKGQISKPVKTDYGYHIIKSEGATLKSFDEVKGDIEAYLLN 269
Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317
K + +Y L A I +
Sbjct: 270 DKKNQVITEKY-DALEKAAKIQKF 292
>gi|282882218|ref|ZP_06290857.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B]
gi|281297983|gb|EFA90440.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B]
Length = 375
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 82/231 (35%), Gaps = 17/231 (7%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+ I +++L + KQ+ + I + + + Q+ G E F ++LD GI
Sbjct: 84 LKDITIKDLTETEIIKQDAAANNIKVEDSEIQKILDQYKAQLGGD-EQFKAYLDSLGIPL 142
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
++ K+ L Q++ + + ++ + K+ F +
Sbjct: 143 DYLKEVLKNQTLVGKYTQEK-NKNIKVTDDDVKKYYDEHKDD----------FFKAKASH 191
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLL 250
+ K+ + ++ + K +K + + G + F + +
Sbjct: 192 ILVDDL--KKANEIKKEIDKGAKFEEMAKKESKDTGSATNGGDLGEFTNGQMVQSFNDAI 249
Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
KK + ++P + G I + +++ + + ++ T K EK
Sbjct: 250 KKMEKGEISDPIKSDFGFHIIKLKERKPRTFDEVKD-EIKSKLTQEKYEKA 299
>gi|255020025|ref|ZP_05292098.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus
ATCC 51756]
gi|254970554|gb|EET28043.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus
ATCC 51756]
Length = 258
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 92/296 (31%), Gaps = 45/296 (15%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + +V + + + T+NG+ I + + +++ + VQ L+
Sbjct: 3 LRSIVLAALVGTFAAPVFAAPVATVNGQAIDNSQVQAILSMSPELAKEPNAREQVVQNLV 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ Q K + V A+ L +
Sbjct: 63 NMEVLSQYAMKHNLDQS-ADVKERLA-LAKR---------QILADAAVD----------- 100
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQK 200
++ ++ E EI A K +EY +R +L + K
Sbjct: 101 ---------QYIKEHPVPESEIQAAYNKFVAAMGKKEYEVRHILVKT-------KAEADK 144
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
+ + + + + K K G+ +++ + P F ++K+ +
Sbjct: 145 ILAELKAGK-KFSTLAEKYS--IDKASAAHGGELGWIVPGMVVPPFAEAIEKAPIDKPVG 201
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + + L + + + ++ A++V LRS A I
Sbjct: 202 PVQTQFGYHIIEVQATKPLT--PPPLSAMKDRIKAQLQQEEAAKFVSDLRSQAKID 255
>gi|228996233|ref|ZP_04155879.1| Foldase protein prsA 1 [Bacillus mycoides Rock3-17]
gi|229003892|ref|ZP_04161699.1| Foldase protein prsA 1 [Bacillus mycoides Rock1-4]
gi|228757344|gb|EEM06582.1| Foldase protein prsA 1 [Bacillus mycoides Rock1-4]
gi|228763501|gb|EEM12402.1| Foldase protein prsA 1 [Bacillus mycoides Rock3-17]
Length = 281
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
++ +++ + S +I T+ G+ I+ D+ K++ K ++ +
Sbjct: 4 AMLALAATSLIALSACGSSDKIVTSKAGD-ISKEDLYKQM--------KDRAGKQILRGM 54
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
++E + + D V+ + ++ + G + F + L +QG + FK+ +
Sbjct: 55 VLEKVLVK-----NHKVDDKEVDKKYDEYKKQLG---DQFDAALKQQGFTKDSFKESVRA 106
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + + E+ K E +L ++ +K
Sbjct: 107 ELAMDKAI------ESSITDKEL-------KENYKPEIKASHILVK-------DEATAKK 146
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNT 257
++ + K +L K S+ + G Y + +F + K ++
Sbjct: 147 VKEELGQ-----GKSFEELAKQYSEDKGSAEKGGDLGYFGPGKMVKEFSDAAYKLKKDEV 201
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P +Q G I + D ++ KA + K + + ++ +L+
Sbjct: 202 SEPVKSQFGYHIIKVTDIKEQKSFEEEKANIKKGLVEKKKQDPQ--FMAELQDK 253
>gi|257789791|ref|YP_003180397.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Eggerthella lenta
DSM 2243]
gi|257473688|gb|ACV54008.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Eggerthella lenta
DSM 2243]
Length = 418
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/335 (13%), Positives = 104/335 (31%), Gaps = 43/335 (12%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKLQ- 66
+I L C + S +S + T+NG I + I+ I ++ Q
Sbjct: 5 YIMKTVCAVGLTAACAWGLAGCSSDDNASSGTGGVAGTVNGVEIAEDTITNYIQGVREQL 64
Query: 67 ----------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+ + L K+ +E+ GIT +S+ ++ +
Sbjct: 65 GADDEDSWGTWLSQNDYTPASVREEVFNSYAQRELLKEGVEEKGITVESSEIDEQIDKVK 124
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
N + E + + LD+ G+ ++ ++ + + + F + ++ Q
Sbjct: 125 ANYD-TDEKWQAALDQAGMTEDSYRAEIEQKLKENKLY-ASFASDEDPSDADMLQYAQMY 182
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+LF+ D + + + D K S+
Sbjct: 183 ATAYDGSKRSSHILFNSDDEATAQEVLDKLNSGEL---------DFVDAVKEYSQDPGSV 233
Query: 231 IGK--AQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ S+L ++++ L+ + + TQ G+ I D E+
Sbjct: 234 ERDGDVGWNNPSNLAKEYKDGLEPLEKGQLSGLVTTQFGIHIIKCTDVYKAPEEVTSLDQ 293
Query: 288 LSAQ--------NTPTKIEKHEAEYVKKLRSNAII 314
+ + TK ++ +++ + A I
Sbjct: 294 IPEEWISVIASSLKSTKQQEAYKKWLDETTEAADI 328
>gi|15594454|ref|NP_212242.1| basic membrane protein [Borrelia burgdorferi B31]
gi|195941846|ref|ZP_03087228.1| basic membrane protein [Borrelia burgdorferi 80a]
gi|216264206|ref|ZP_03436198.1| basic membrane protein [Borrelia burgdorferi 156a]
gi|218249766|ref|YP_002374636.1| basic membrane protein [Borrelia burgdorferi ZS7]
gi|221217448|ref|ZP_03588919.1| basic membrane protein [Borrelia burgdorferi 72a]
gi|223889066|ref|ZP_03623655.1| basic membrane protein [Borrelia burgdorferi 64b]
gi|224532923|ref|ZP_03673533.1| basic membrane protein [Borrelia burgdorferi WI91-23]
gi|224533973|ref|ZP_03674557.1| basic membrane protein [Borrelia burgdorferi CA-11.2a]
gi|225549343|ref|ZP_03770316.1| basic membrane protein [Borrelia burgdorferi 94a]
gi|225549885|ref|ZP_03770847.1| basic membrane protein [Borrelia burgdorferi 118a]
gi|226320700|ref|ZP_03796258.1| basic membrane protein [Borrelia burgdorferi 29805]
gi|226321981|ref|ZP_03797506.1| basic membrane protein [Borrelia burgdorferi Bol26]
gi|2687994|gb|AAC66497.1| basic membrane protein [Borrelia burgdorferi B31]
gi|215980679|gb|EEC21486.1| basic membrane protein [Borrelia burgdorferi 156a]
gi|218164954|gb|ACK75015.1| basic membrane protein [Borrelia burgdorferi ZS7]
gi|221192726|gb|EEE18942.1| basic membrane protein [Borrelia burgdorferi 72a]
gi|223885315|gb|EEF56416.1| basic membrane protein [Borrelia burgdorferi 64b]
gi|224512122|gb|EEF82513.1| basic membrane protein [Borrelia burgdorferi WI91-23]
gi|224512809|gb|EEF83176.1| basic membrane protein [Borrelia burgdorferi CA-11.2a]
gi|225369576|gb|EEG99027.1| basic membrane protein [Borrelia burgdorferi 118a]
gi|225370201|gb|EEG99641.1| basic membrane protein [Borrelia burgdorferi 94a]
gi|226232571|gb|EEH31325.1| basic membrane protein [Borrelia burgdorferi Bol26]
gi|226233916|gb|EEH32639.1| basic membrane protein [Borrelia burgdorferi 29805]
gi|312148208|gb|ADQ30867.1| basic membrane protein [Borrelia burgdorferi JD1]
gi|312149453|gb|ADQ29524.1| basic membrane protein [Borrelia burgdorferi N40]
Length = 336
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/322 (15%), Positives = 106/322 (32%), Gaps = 34/322 (10%)
Query: 27 IVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKI---NGELEKIAVQEL 80
I+ V S+A ++ + IN E+IT ++ + K + +K +Q L
Sbjct: 9 ILGTVGISSFAQNTPV-AIINLYKNEIITKTGFDSKVDIFKKTQGRDLTDAEKKQVLQVL 67
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + L QE K GI + V + E ++KQG +
Sbjct: 68 IADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGTNWGELLSSMKR 127
Query: 141 QSIWPDVVKNDFMLKYGN----LEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+V K+ E EI K K + + + FS D K +
Sbjct: 128 SLSSQKLVLKQAQPKFSEIKTPSEKEIVEYYEANKTKFVNPDISRVSHIFFSTKDKKRSD 187
Query: 195 QG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD---LHPQF-QN 248
+ + ++ + K +SK + +G ++ L F +
Sbjct: 188 VLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNAQNLLGADFVKE 247
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLSAQNTP--- 294
+ ++ + ++P +++G + + DK ++ +K +
Sbjct: 248 VFNFNKGDISSPIASKEGFHIVKVTEKYAQRFLGLNDKVSPTADLIVKDAIRNNMINVQQ 307
Query: 295 -TKIEKHEAEYVKKLRSNAIIH 315
+ + + + KL +A I
Sbjct: 308 QQIVVQVQQDMYGKLNKSANIQ 329
>gi|223039645|ref|ZP_03609931.1| foldase protein PrsA [Campylobacter rectus RM3267]
gi|222879028|gb|EEF14123.1| foldase protein PrsA [Campylobacter rectus RM3267]
Length = 270
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 98/299 (32%), Gaps = 40/299 (13%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELI 81
F + + ++++ + T+NG ITD DI+ + + L+++ + +K + E I
Sbjct: 4 FLFATLSLAAAMSLNAAVHATVNGSDITDKDIAFTLAAMPGVTLEQLPKDTQKKVIDETI 63
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L E +KSG+ +++ + L K +A+
Sbjct: 64 SRKLLLDEAKKSGLE-------------------KTDEYKAAL-------EEVKDNIALD 97
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ N +K E+ NK K + + + +L + K N +
Sbjct: 98 LWMKRIFDN---VKVSENEISDFYNKNKAEFAVPAQVKAKHIL--VAAEKDANDVIAALK 152
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN- 259
+ + + + G+ + +S + F + + T
Sbjct: 153 GLKGDALVKKFEELAKAKSTDQGSAEN--GGELGWFGQSQMVKPFADAAFALKKGEITAK 210
Query: 260 PYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
P + G I D + G G +K + K + +LR+ A + Y
Sbjct: 211 PVKSNFGYHVILKEDSKAAGTVGLNEVKPQIEGNLKMEKFRNDIRKRGDELRAKAKVEY 269
>gi|253699826|ref|YP_003021015.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
gi|251774676|gb|ACT17257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
Length = 325
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/324 (13%), Positives = 104/324 (32%), Gaps = 24/324 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVS-----YKSWAMSS--RIRTTINGEVITDGDISKRI----- 60
++++ T L+ C + + + A + +I +N I I +
Sbjct: 1 MQVMKTIICLLSACALSLAGNHQAWAEPMAEDNGLQIAARVNDRPIYYHQIKANVERTLA 60
Query: 61 --ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
KI+ +++K ++ + + + + ++G + +
Sbjct: 61 KYKRFGASKISDDVKKQVQKDELDRQVNMELLVQAGEKLKETDLEKKMEALL---NMKGP 117
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVRE 177
D S + K + ++ L + + + E E+ K V E
Sbjct: 118 DGSPRVKKDESREKEMREQLRRNLLAESYLVLRGIQDVRVPEEELKRFYKDNSAKFAVPE 177
Query: 178 -YLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKA 234
+ ++ ++ Q +I E L+ K + ++ +S G
Sbjct: 178 AVKVSHIMIAVDKKATPQEVAKANAKIVKVREELLQGKKSFEELAKEHSSGDSAAKGGDL 237
Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-- 291
Y+ + P+F + + ++ T+ G I DK+ + + + +
Sbjct: 238 GYINPQFMPPEFDKAAFQLKSGEVSDVVKTKFGFHLIKAFDKKPGRIQEFSEVKVLLEKF 297
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315
E+ AE +LR +A I
Sbjct: 298 LLNQYQERKRAEIAMELRRDARIE 321
>gi|317489254|ref|ZP_07947771.1| ppic-type ppiase domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|325832301|ref|ZP_08165300.1| PPIC-type PPIASE domain protein [Eggerthella sp. HGA1]
gi|316911655|gb|EFV33247.1| ppic-type ppiase domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|325486137|gb|EGC88591.1| PPIC-type PPIASE domain protein [Eggerthella sp. HGA1]
Length = 418
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/335 (13%), Positives = 104/335 (31%), Gaps = 43/335 (12%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRIALLKLQ- 66
+I L C + S +S + T+NG I + I+ I ++ Q
Sbjct: 5 YIMKTVCAVGLTAACAWGLAGCSSDDNASSGTGGVAGTVNGVEIAEDTITNYIQGVREQL 64
Query: 67 ----------------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+ + L K+ +E+ GIT +S+ ++ +
Sbjct: 65 GADDEDSWGTWLSQNDYTPASVREEVFNSYAQRELLKEGVEEKGITVESSEIDEQIDKVK 124
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
N + E + + LD+ G+ ++ ++ + + + F + ++ Q
Sbjct: 125 ANYD-TDEKWQAALDQAGMTEDSYRAEIEQKLKENKLY-ASFASDEDPSDADMLQYAQMY 182
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+LF+ D + + + D K S+
Sbjct: 183 ATAYDGSKRSSHILFNSDDEATAQEVLDKLNSGEL---------DFVDAVKEYSQDPGSV 233
Query: 231 IGK--AQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ S+L ++++ L+ + + TQ G+ I D E+
Sbjct: 234 ERDGDVGWNNPSNLAKEYKDGLEPLEKGQLSGLVTTQFGIHIIKCTDVYKAPEEVTSLDQ 293
Query: 288 LSAQ--------NTPTKIEKHEAEYVKKLRSNAII 314
+ + TK ++ +++ + A I
Sbjct: 294 IPEEWISVIASSLKSTKQQEAYKKWLDETTEAADI 328
>gi|88606731|ref|YP_504706.1| hypothetical protein APH_0074 [Anaplasma phagocytophilum HZ]
gi|88597794|gb|ABD43264.1| conserved hypothetical protein [Anaplasma phagocytophilum HZ]
Length = 393
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 91/296 (30%), Gaps = 27/296 (9%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQE 79
+ + ++ S +I ++ +V+T D+ +R K G + +
Sbjct: 8 LCFLCLVIPCGKGCASVKIEAVVDDKVLTSLDVDRREHANGFFYKTAYAEGNRRE-VLGL 66
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYL 138
LI E + + E ++ GIT + V + GL S G+ + ++
Sbjct: 67 LIDEVILELEAKQLGITVEKQEVAQEVERLFSVLGLCSGLSLDECAAGNGLDAASIESHV 126
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGF 197
+ IW ++ + E+ + K + + V + +
Sbjct: 127 RSRVIWSKILSTRVAPFLSVADDEVSQYVAEAKSDALETVLDLEQVFVPFRAGAVLDSVA 186
Query: 198 VQKRIK-DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256
+ + + R + ++G + S LL+ + +
Sbjct: 187 SELHKGVELTKIAERYR---EHGVYVDRTMGASAVGFVHDVKVS--------LLRAKEGS 235
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE---KHEAEYVKKLR 309
P KG + + K K ++++ + ++ K + LR
Sbjct: 236 IIGPVRIDKGHLLLKLLSKV-----RVKKRFMNSVVSMKQLSVPVKEAGSILDDLR 286
>gi|325266978|ref|ZP_08133648.1| cis-trans isomerase [Kingella denitrificans ATCC 33394]
gi|324981478|gb|EGC17120.1| cis-trans isomerase [Kingella denitrificans ATCC 33394]
Length = 317
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/318 (12%), Positives = 108/318 (33%), Gaps = 14/318 (4%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+K + T ++ + + + + I IN +IT DI + + K + N +
Sbjct: 1 MKPIRTLAAAVLVGLSLQTAGAAEIKPLNSIAIEINSSIITYRDIERVVREFKSRPGNKD 60
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + A L+ L + ++ + A + ++ +
Sbjct: 61 IPEAQLVQAAKNTLVERALLADAARAQDLKATPAGIDAELERRAAAGKTTVQNIYAQAAA 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----KMKNITVREYLIRT 182
G ++ +A + +++N + ++ A K + T Y + T
Sbjct: 121 LGYTREAYRTEVAKDLLITYMLQN-LNSNIKITDEQVQAALNELQAKGQAPTGEPYTVYT 179
Query: 183 VLFSIPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ I + Q V +RI+ + + ++++ ++ + G + +
Sbjct: 180 IRRVILNAANQQHMPAVGQRIQQIATAIAQGSDFGAVAQRYSQEVQAANQGLHDNITDMM 239
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY-LSAQNTPTKIEK 299
L + L + T P + + + R ++ + E+
Sbjct: 240 LPENVEAALHQLQPGQITPPLRAGNSWQIVQLIGARTENDPAKMQREAVRRMLVRQAQER 299
Query: 300 HEAEYVKKLRSNAIIHYY 317
++A+++ +L+ A++ Y
Sbjct: 300 NQAQFMAQLQQMAVVREY 317
>gi|225552054|ref|ZP_03772994.1| basic membrane protein [Borrelia sp. SV1]
gi|225371052|gb|EEH00482.1| basic membrane protein [Borrelia sp. SV1]
Length = 336
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/322 (15%), Positives = 106/322 (32%), Gaps = 34/322 (10%)
Query: 27 IVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKI---NGELEKIAVQEL 80
I+ V S+A ++ + IN E+IT ++ + K + +K +Q L
Sbjct: 9 ILGTVGISSFAQNTPV-AIINLYKNEIITKTGFDSKVDIFKKTQGRDLTDAEKKQVLQVL 67
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + L QE K GI + V + E ++KQG +
Sbjct: 68 IADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGTNWGELLSSMKR 127
Query: 141 QSIWPDVVKNDFMLKYGN----LEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+V K+ E EI K K + + + FS D K +
Sbjct: 128 SLSSQKLVLKQAQPKFSEIKTPSEKEIIEYYEANKTKFVNPDISRVSHIFFSTKDKKRSD 187
Query: 195 QG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD---LHPQF-QN 248
+ + ++ + K +SK + +G ++ L F +
Sbjct: 188 VLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRGDQNAQNLLGADFVKE 247
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAIC-----------DKRDLGGEIALKAYLSAQNTP--- 294
+ ++ + ++P +++G + + DK ++ +K +
Sbjct: 248 VFNFNKGDISSPIASKEGFHIVKVTEKYAQRFLGLNDKVSPTADLIVKDAIRNNMINVQQ 307
Query: 295 -TKIEKHEAEYVKKLRSNAIIH 315
+ + + + KL +A I
Sbjct: 308 QQIVVQVQQDMYGKLNKSANIQ 329
>gi|33519602|ref|NP_878434.1| survival protein SurA precursor [Candidatus Blochmannia floridanus]
gi|33517265|emb|CAD83649.1| survival protein SurA precursor [Candidatus Blochmannia floridanus]
Length = 426
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 95/283 (33%), Gaps = 26/283 (9%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------- 65
+K FV++ I I Y + RI +N +I D+ +I +LK
Sbjct: 1 MKFFRILFVILTLKINTI--YSTLNTIDRIAALVNQNIILKSDVFNKINILKKDILHSDQ 58
Query: 66 -QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
N +L + + +LI+ L Q K+ + D N ++ A ++ F +L
Sbjct: 59 FSLENTKLYQKILDQLIINNLIAQIATKNNVQIDHNNIDQVINYVAHCRNMTKNQFLMYL 118
Query: 125 DKQ-GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI---TVREYLI 180
G+ + + + + + + EI QK+ I +++
Sbjct: 119 QHNLGLNFKQYYSEIYQDILNKLICNHIISQRIKISTHEINQTAQKLSFINFHKQFKFIH 178
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ----- 235
+ IP Q + + E + + + ++ S ++ +I
Sbjct: 179 TIIELPIPAETTQIN-----ILNNFAEQLSKKKELHDNIQNIISSYYNNNIFPRITTHIQ 233
Query: 236 -YLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
+ +L F L+ + P + + + I D R
Sbjct: 234 PWTAWKNLPVIFDQYLQTAKPGDIIGPIHSFDSIHILKIQDIR 276
>gi|224534854|ref|ZP_03675423.1| basic membrane protein [Borrelia spielmanii A14S]
gi|224513794|gb|EEF84119.1| basic membrane protein [Borrelia spielmanii A14S]
Length = 336
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 98/275 (35%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---NGEL 72
+ ++ L+I V I S+ + I N E+IT ++ + K +
Sbjct: 1 MKSFLFLVILGTVGINSFAQNTPVAIINLYKN-EIITKTSFDSKVDIFKKTQGRDLTTAE 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-- 130
+K +Q LI + L QE K GI + V + E ++KQG
Sbjct: 60 KKQVLQVLIADVLFSQEASKQGIKISDDEVMQTIRTQFGLVNFTDEQIKQMIEKQGTNWG 119
Query: 131 --DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFS 186
+ K+ L+ Q + + F E EI K K + + V FS
Sbjct: 120 ELLSSMKRSLSSQKLILKQAQPRFSEVKTPSEKEIIEYYEANKTKFVNPDISRVSHVFFS 179
Query: 187 IPDNKLQNQG-FVQKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESD--- 241
D K + + + ++ + K +SK + +G ++
Sbjct: 180 TKDKKRSDVLDQAKNILSQIRSKKITFEEAVRKYSNDESSKAKNGDLGFLSRDDQNAQNL 239
Query: 242 LHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
L F + + ++ + ++P +++G + + +K
Sbjct: 240 LGSDFIKEVFNFNKGDISSPIASKEGFHIVKVTEK 274
>gi|218960354|ref|YP_001740129.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor
[Candidatus Cloacamonas acidaminovorans]
gi|167729011|emb|CAO79922.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor
[Candidatus Cloacamonas acidaminovorans]
Length = 418
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 109/292 (37%), Gaps = 20/292 (6%)
Query: 35 SWAMSSRIRTTINGEVITDGDISK---RIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
S + +I + ++I D+ K ++ + L + + + + E+I + L Q+ +
Sbjct: 18 SAELIDKIVAKVGTDIILLSDLQKEMVQMQSVGLLEEDTDPRD-VLDEMINQKLIIQKAK 76
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAE---DFSSFLDKQGIGD----NHFKQYLAIQSIW 144
IT + + + + F++ L K + + ++ L Q++
Sbjct: 77 DLNITVNDEEIKVMAENYLKKVKAQYPSSSAFAADLKKSKLTESDLLQLYRDILTEQALS 136
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE---YLIRTVLFSIPDNKLQNQGFVQKR 201
++K + + K E E+ K+ + + + + I N+ + + +
Sbjct: 137 DQILKKEIINKVSVTEAEVINFYNATKDSLAVKPVSWDLGIIFREIKPNQKSKEAKLAEI 196
Query: 202 IKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
+ ++RL+ +D L S G + + F++ Q ++
Sbjct: 197 KE--IQTRLKNGEDFATLASTESDCPSKEVGGDLGFFKRGQMVKPFEDAAFALQLGEISD 254
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
++ G I + +KR G EI + L A + E + ++++R+
Sbjct: 255 IVESEYGYHIIRLEEKR--GNEIRARHILKALTPTAEDSLRERQLMEEIRNR 304
>gi|298292757|ref|YP_003694696.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Starkeya novella DSM
506]
gi|296929268|gb|ADH90077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Starkeya novella DSM
506]
Length = 337
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 94/284 (33%), Gaps = 42/284 (14%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE-----LIVETLKKQEIEKSG 94
+ T+NG IT GD++ A L Q + +L+ A E LI T Q E
Sbjct: 64 DTVLATVNGAAITRGDVNAAAAEL-AQNLPPQLQGPARDEYVLGFLIDLTAMAQAAEADK 122
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ F L + ++ + +Q+ K
Sbjct: 123 LDQTPA-------------------FKQQL-------DFIRKRVLMQAALEKATKAALTD 156
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E +QK + E R +LF + + +K+ +D E RL+ +
Sbjct: 157 DAMKKTYEEAVKQQKPEE----EVHARHILFRASPDDKEASAAAEKKAQDVEA-RLKKGE 211
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K ++ G + + + P+F + + P TQ G I
Sbjct: 212 DFATLAKQLTEDPSGKQDGGDLGFFAKEQMVPEFAEVAFAMKPGEVSKPVKTQFGWHVIK 271
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +KR+ + + + + EA V+K R A +
Sbjct: 272 VEEKREKPTPTFDEVKPQIEQFLAQKAQAEA--VQKTREAAKVE 313
>gi|254457621|ref|ZP_05071049.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Campylobacterales
bacterium GD 1]
gi|207086413|gb|EDZ63697.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Campylobacterales
bacterium GD 1]
Length = 275
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 102/298 (34%), Gaps = 40/298 (13%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------ALLKL-QKINGELEKIAVQE 79
IV + S +S+ T+NG IT D+ + ++ + E K +++
Sbjct: 7 IVATLLLTSTLVSATTLITVNGTQITQQDVDTALMNATQGRFNQVPAEKQAEFRKQVLEQ 66
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI + L + +K+G+ +S FVQ K+ LA
Sbjct: 67 LIAKELVFGDAQKTGV-LNSKDFKDEFVQVQER---------------------VKKELA 104
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
IQ +W + K + E+ K K+ + + + +
Sbjct: 105 IQ-VWQK----QQLDKVEVSDKELKNYYDKNKDEFNEKETVHARHILVKTEEEAKNIVKS 159
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
+ E + + + + ++ G Y + + P+F + + +
Sbjct: 160 LKSLKGEALKAKFI---EEAKAKSTGPSGPKGGDLGYFAQGQMVPEFNDKVFGMKVGTVS 216
Query: 259 NPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P TQ G I + DK + +K+++ + K + + + +L++ A I
Sbjct: 217 EPVKTQFGYHVIYLEDKKAKKTLAFTEVKSFIEQRLKMEKFKVVMQDKMLELKNKATI 274
>gi|108758423|ref|YP_630863.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622]
gi|108462303|gb|ABF87488.1| peptidylprolyl cis-trans isomerase [Myxococcus xanthus DK 1622]
Length = 524
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 102/366 (27%), Gaps = 74/366 (20%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS----KRIALLKLQK 67
FI + F L A + ++NG+ I D + ++++ L+ Q
Sbjct: 17 FIIGIAVVFTLQFGPGSSGFGATGGATAPGSVASVNGKEIPLRDFAAAWAQQMSFLRSQG 76
Query: 68 INGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLS 116
+ + L+ L Q E+ GI + + Q ++
Sbjct: 77 SPVPESLARQFGMHNQVLDRLVNTELLAQAAERHGIAASDDELRKLIHQNTDFQKDGQFD 136
Query: 117 AEDFSSFLDK-QGIGDNHFKQYLAIQSI---WPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
E + L F+ L Q DVV+ + ++ + + K
Sbjct: 137 FERYQQVLRDFYRKSPQDFEAELRRQLAAQKMMDVVRGNAVVSDDEVRARFEKEGNQAKV 196
Query: 173 I------------------------------TVREYL--------------IRTVLFSIP 188
+ ++EY R VL +P
Sbjct: 197 VFARFLPAMYADKVPSPTAAQLAEWKKAHEKDIKEYFEANRFVYQQPERIRARQVLVKLP 256
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF 246
+Q A + KD ++ + +S+ G ++ P
Sbjct: 257 PEATADQKKAALEKAQALRKEIEGGKDFAQVARDSSEDPGSKARGGDLGWVERGSWEPAL 316
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALKAYLSAQNTPTKI 297
+ Q T P T+ GV + + +K+ D+ EIA Y +
Sbjct: 317 ADAAFALKQGEVTQPVETKFGVHLVKVDEKQAAQDKKLEDVQDEIATTLYKQDRAKQQAR 376
Query: 298 EKHEAE 303
+ E
Sbjct: 377 AEAEKA 382
>gi|324325280|gb|ADY20540.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 285
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELQKAKNQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK++L +K + +I + ++ A
Sbjct: 206 QISNPVTSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQDELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|209517045|ref|ZP_03265893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
gi|209502576|gb|EEA02584.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
Length = 259
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 82/279 (29%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ +L++ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKSRADALIQQLVHQGQQDTPQLQQAVREELVNREILMQEALRRGL-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V + L + ++ + +
Sbjct: 84 DVKAQVA---------VAQQTVVLRAL------IEDFVKNNQPTDAEITARYNALV---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A L
Sbjct: 125 ----------KDAGGQEYHLHHILV---DNEQQAKDLIAKIKAGA---------SFEDLA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F + + T P TQ G I + D R
Sbjct: 163 KQYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDIR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + AQ ++ + + LR NA I
Sbjct: 223 AVT--PPPLEQVRAQIVQQIQQEKLQAFEENLRKNARIQ 259
>gi|187923910|ref|YP_001895552.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
gi|187715104|gb|ACD16328.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
Length = 259
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 82/279 (29%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ +L+ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQTAVREELVNREILMQEALRRGL-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ + V +
Sbjct: 84 DIKAQIA---------VAQQTVVLRAL------IEDFVKNNTPSDAEVTARYNALI---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A L
Sbjct: 125 ----------KDAGGKEYHLHHILV---DNEQQAKDLIAKIKAGA---------SFEDLA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F + + T P TQ G I + D R
Sbjct: 163 KQFSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + Q ++ + + LR NA I
Sbjct: 223 NIT--PPPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259
>gi|262278898|ref|ZP_06056683.1| ppic-type ppiase domain-containing protein [Acinetobacter
calcoaceticus RUH2202]
gi|262259249|gb|EEY77982.1| ppic-type ppiase domain-containing protein [Acinetobacter
calcoaceticus RUH2202]
Length = 351
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 67/170 (39%), Gaps = 15/170 (8%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G +++ KQ + V ++ R +L + K+I D RL+
Sbjct: 176 VRDGVHVLKLIERKQNEQKALVPQFQTRHILIQPSEVVSLENA---KQIIDNIYKRLKAG 232
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
D L S + G ++ + P+F +++ + P+ TQ G +
Sbjct: 233 DDFATLAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHIL 292
Query: 271 AICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +KR+ E + L + T+I+ +++++R+NA +
Sbjct: 293 QVTEKREKDMTHEYQERMARQILGERQFNTEID----SWLREVRANAYVE 338
>gi|82703233|ref|YP_412799.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira
multiformis ATCC 25196]
gi|82411298|gb|ABB75407.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira
multiformis ATCC 25196]
Length = 265
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 94/308 (30%), Gaps = 48/308 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-- 70
+ + + + I + A + +NG I + + Q
Sbjct: 1 MHFMKFTRLAALGISGLIAATTVQAQTGSTMAKVNGTPIPQSRLEFIMKARASQGQPDTP 60
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
E K ++LI E + QE +K G+ D + + AR T + ++ +
Sbjct: 61 EARKALREDLITEEVIAQEAKKKGLDRDPDFITQL--DMARQTAMVRAYQIDYIKNHPVS 118
Query: 131 DNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
D K+Y +++ D +EY +L + +
Sbjct: 119 DEELHKEYETVKTQMGD-----------------------------KEYKAHHILVATEE 149
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + K K A+ +L K + K G+ + + F
Sbjct: 150 EA---KDIIAKLKKGAKFDKLAGEKSLDTGSK-------SKGGELDWSPAASYVQPFAEA 199
Query: 250 LKKS-QNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
L K + T P T G I + D R L I + +++ A +
Sbjct: 200 LTKLHKGQLTDQPVKTPFGWHVIRLDDVRPLK--IPPFEEIKQNLAQRVLQRQFAASIND 257
Query: 308 LRSNAIIH 315
LRS A +
Sbjct: 258 LRSKAKVE 265
>gi|149182999|ref|ZP_01861454.1| post-translocation molecular chaperone [Bacillus sp. SG-1]
gi|148849283|gb|EDL63478.1| post-translocation molecular chaperone [Bacillus sp. SG-1]
Length = 324
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 100/300 (33%), Gaps = 36/300 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+LT + + + + +S + +T ++ + + +
Sbjct: 5 ILTMSLAAGVITLSACNNAEDNGGNSEVVAETKAGDVTKEELYTSMK-----EKFTPQME 59
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A+QEL+ LKK +K V+ + G F FL + + + F
Sbjct: 60 QALQELV---LKKVLGDKY--EVTEEEVDEKLNEAKDQLG---PQFDMFLSQYNLNEESF 111
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++YL +Q + D + L+ K E +R +L +
Sbjct: 112 REYLELQLLQEKAATADIEVSEDELQEYYDNWK--------PEIEVRHILV--------D 155
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKS 253
K +K + + + S+G Y + P+F L+K
Sbjct: 156 DEETAKEVKQKLADGAKFEDLAKEYSNDPGSAENGGSLGWVDYEGRQNFVPEFSEALEKL 215
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGG-----EIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ + P TQ G I + DK++ + K+ ++ TP KI++ E V+
Sbjct: 216 KTGKVSEPVKTQYGFHIIEVTDKKEKNSFDEMKDELEKSLKLSKVTPEKIQQAMKEIVED 275
>gi|312128222|ref|YP_003993096.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
hydrothermalis 108]
gi|311778241|gb|ADQ07727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
hydrothermalis 108]
Length = 335
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 58/314 (18%), Positives = 108/314 (34%), Gaps = 35/314 (11%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRI------- 60
+ + VL+I I + +R +NGE IT + I+ R
Sbjct: 5 TKIVLFSIAAVVLLIILIAVTPEIVRYVDENRAVAIVNGEKITKKEFAINYRSQINYYGL 64
Query: 61 --ALLKLQKINGELEKI----AVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHAR 111
A L + + E+ + LI+ ++ Q+ K IT + ++ Q+ +
Sbjct: 65 DKAFLSQKVGDKTYEQQIKENVLNGLIIRQIELQQARKRNITLTAAEKKAIDQQIQQY-K 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ S +F +L G +N +K + Q + + K + E+E N K
Sbjct: 124 SDSQSGAEFKQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKNQKATDAEIESYYNSHKS 183
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-- 228
+ E +LF + N + K E L++ KD EK A K +
Sbjct: 184 DFV---EVKASHILFKV------NDSKEEATKKKKAEEILQMIKDGQNFEKLAQKYSEDE 234
Query: 229 ---VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G Y + + +F++ + ++ T G I + D++ L
Sbjct: 235 TTKQKGGDLGYFRKGQMVKEFEDAAFSLNIGEISSIVKTSYGFHIIKVTDRKQLSLNEVK 294
Query: 285 KAYLSAQNTPTKIE 298
S + K E
Sbjct: 295 DEIKSTIESQKKDE 308
>gi|325981462|ref|YP_004293864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp.
AL212]
gi|325530981|gb|ADZ25702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp.
AL212]
Length = 264
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 51/307 (16%), Positives = 106/307 (34%), Gaps = 52/307 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGELE 73
L + ++I + ++++ A SS + +NG I ++ + + + Q+ E+
Sbjct: 3 LKKFSQVMIISVWGLIAFSVQAQSSGVVAKVNGVAIPQSRLELMVKANVAQGQQDGPEMR 62
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K + LI E + QE K + D + + AR L + ++ + D+
Sbjct: 63 KALRENLIAEEILAQEATKKRLDQDPEVIAQL--EIARQAVLVRAFQADYIKHNQVSDDT 120
Query: 134 FK---QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ L +Q +EY R +L +N
Sbjct: 121 LRKEYDVLRVQMG-------------------------------DKEYKARHILV---EN 146
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-L 249
+ + + + K +++ K + K + G+ + + F L
Sbjct: 147 ENEARDIIASLKKGGNFAKIAEEKSIDDGSKE-------NGGELNWSPPAAYVRPFSEAL 199
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+K S+ T P T G I + D R + E+ + +++ A V+ L
Sbjct: 200 VKLSKGGMTEQPVQTSFGWHVIQLMDIRPM--EVPPFEEVKQNIQQRVLQREFATVVQDL 257
Query: 309 RSNAIIH 315
RS A +
Sbjct: 258 RSKAKVE 264
>gi|189218309|ref|YP_001938951.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum
infernorum V4]
gi|189185167|gb|ACD82352.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum
infernorum V4]
Length = 332
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 105/311 (33%), Gaps = 28/311 (9%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRI----ALLK-------LQKINGELEKIAVQELIV 82
S I +N +VIT + K++ A+L+ L E A++ LI
Sbjct: 23 SQTQGSDGIAAIVNDKVITFSQVRKQVEPNEAVLRETYQGSELVNRIKEARLSALRALID 82
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L Q+ + + + R F L GI + +KQ L Q
Sbjct: 83 RELIIQDFKSKKYAIPDSFIESRVRDIIRTQFDGDRIAFIRTLQASGISEEQYKQQLLEQ 142
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
I + + +I Q + + +R ++F + + V
Sbjct: 143 IIVQAMRMKNVSEPVIISPYQIEKYYQDHIAQFFEPPQVKLR-IIFLQKTSFKDKRATVN 201
Query: 200 KRIKDAEESR---------LRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQN- 248
++++ + +R L+L D +L + ++ + G ++ + L P+
Sbjct: 202 GQLEEYDPARETATELLSKLQLGADFAELARSYSEGPKRMDGGDLGWVTKDSLRPEIAEA 261
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVK 306
T+ T G I + DKR + + + + +K + +++
Sbjct: 262 AFSMYPGQTSGVIETLDGYYIIRLEDKRKGKLKPISEVRTQIEGLLIQEQRQKLQQQWLD 321
Query: 307 KLRSNAIIHYY 317
L++ A I +
Sbjct: 322 NLKAKAFIKMF 332
>gi|307265095|ref|ZP_07546655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
wiegelii Rt8.B1]
gi|306919893|gb|EFN50107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 301
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/324 (15%), Positives = 91/324 (28%), Gaps = 54/324 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L++F + + S + + T+NGE IT+ + K +K Q +
Sbjct: 1 MKRKIALLLFFVFIVFLTVSCSTKKDVVATVNGENITNAEYKKAFDQVKAQIESSPQYTK 60
Query: 72 ---------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+++ + LI + L QE K+ IT + + +
Sbjct: 61 DIWDQDYQGKKFLDVVKENVLDSLIAQKLLVQEALKNNITVTDKEIADEYQKEKEVNK-- 118
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
I K YL I ++ + K E K N
Sbjct: 119 -----------DITKEDVKNYLLINKLFDEYTK-------DVKVTEEELKKYYEDNKEQF 160
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKA 234
E + K + ++ + +RL +D L K S G
Sbjct: 161 EVV-----------KASHILVADEKTAEDIYNRLMKGEDFATLAKEYSIDTATKDQGGDL 209
Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ +F Q + + + P T G I + A
Sbjct: 210 GEFPHGVMVSEFDQVVFSLKKGEISKPVKTDYGYHIIKSEGITIKPFDEVKDAIEGYLLD 269
Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317
K + + +Y L A I +
Sbjct: 270 DKKNQVIKEKY-DALEKAAKIQKF 292
>gi|49480029|ref|YP_035403.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49331585|gb|AAT62231.1| peptidyl-prolyl cis-trans isomerase (protein export protein)
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 285
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 94/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKEVQKAKNQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ +K E ++ K+ E +L ++
Sbjct: 111 KFKLSMNKAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K E + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLEAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLKIGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK++L +K + +I + ++K A I
Sbjct: 208 SNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKANI 266
>gi|323137132|ref|ZP_08072211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocystis sp.
ATCC 49242]
gi|322397490|gb|EFY00013.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylocystis sp.
ATCC 49242]
Length = 297
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 90/280 (32%), Gaps = 49/280 (17%)
Query: 41 RIRTTINGEVITDGDISKRIALLK----LQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
++ +NG ITD D+ + L Q + + L+ E L Q+ + +
Sbjct: 34 KVLAKVNGVEITDDDLKLAMEDLGPGIPRQLEGKARDAYVLDFLVDEQLVVQKAQADKLA 93
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+F+ L + ++++ +V K
Sbjct: 94 ETP-------------------EFAKKLAY-------LRDKALMETLLGNVAKQAATEAA 127
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ A QK + EY +L ++ + R++ +D
Sbjct: 128 IKQTYDEAAKNQKPE----TEYHAHHILVGSEEDAKKALA------------RVKGGEDF 171
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDK 275
K+ SK G + + + P+F + K ++P TQ G I + +K
Sbjct: 172 AKVVAEVSKDSGPKNGDLGWFTKDRMVPEFADAAAKLEPGQISDPVKTQFGWHIIKLDEK 231
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + Q ++K +++ V KLR A I
Sbjct: 232 RPKA--FPPLDQVKDQVARYVVQKAQSDLVVKLREAAKIE 269
>gi|289548355|ref|YP_003473343.1| hypothetical protein Thal_0582 [Thermocrinis albus DSM 14484]
gi|289181972|gb|ADC89216.1| hypothetical protein Thal_0582 [Thermocrinis albus DSM 14484]
Length = 275
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 57/305 (18%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI----------NGELEKIAVQE 79
+ + A + + INGE I +R L+ K +
Sbjct: 7 FLVFILLAQAQPV-ARINGEPI------QREDFLRAFNAYWREIIHLPIAQASRKDMEEF 59
Query: 80 LIV---ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
LI + ++E +K G++ S ++ + ++ + LS + K
Sbjct: 60 LIELVRGKIVEREAKKMGLSVTSKELDEYIEKNVGSKNLSP-----------VVIELLKV 108
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ Q I + + + +I A Y + F +P L ++
Sbjct: 109 EVLTQKITDRIAR-----HIRITDDQITAY-----------YYLNLRDFKLPAQVLLSRY 152
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQN 255
+ + A E RL K S + V +G + L ++ L +
Sbjct: 153 VAED-LDTANELYYRLSKGYLS----VSDLRGVKVGPPMWYSIQTLPEIVKSQLYPYEEG 207
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIA---LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
T P T+ G + + +R GG + K + + + ++ ++++++ +
Sbjct: 208 KVTKPIQTEAGYLILRVV-RRRGGGILPLEEAKPLVREKLLKERRQEVFRKWLEEVLQSY 266
Query: 313 IIHYY 317
+ ++
Sbjct: 267 RVEFF 271
>gi|206977675|ref|ZP_03238567.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus H3081.97]
gi|206744103|gb|EDZ55518.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus H3081.97]
Length = 285
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNDSDPVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELQKAKNQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK++L +K + +I + ++ A
Sbjct: 206 QISNPVTSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|229068702|ref|ZP_04202000.1| Foldase protein prsA 1 [Bacillus cereus F65185]
gi|229078350|ref|ZP_04210914.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|229177575|ref|ZP_04304953.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228605937|gb|EEK63380.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228705025|gb|EEL57447.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|228714449|gb|EEL66326.1| Foldase protein prsA 1 [Bacillus cereus F65185]
Length = 289
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 99/300 (33%), Gaps = 41/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + + +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLMKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V + + ++ A + K E +L + + +
Sbjct: 104 NSVRAQLAQEKAV------EQSITDKDVKAKFEDYKK----EIKASHILVKDEETAKKVK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F+ +K +
Sbjct: 154 DELAQ-GKSFEELAKQYSEDTGSKEK---------GGDLGFFGPGKMVKEFEEAAQKLKK 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + D KA + K + + +K+++
Sbjct: 204 GEVSEPVKTQFGYHIIKVTDNHADANFDKAKADIKKSLVQEKTQDAQFMNDLMMKEIKKA 263
>gi|228957422|ref|ZP_04119177.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228802255|gb|EEM49117.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 287
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 104/300 (34%), Gaps = 51/300 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +++T GDI+K +++ G K +
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKIVTSKAGDITKEEFYNQMKTQAG---KQVLN 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + D V+ F + + G + F + L +QG+ + FK L
Sbjct: 55 NMVMEKVLIK-----NYKVDDKEVDKKFDETKKQVG---DQFDTLLKQQGLKEETFKNML 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q +E +++K+ E +L ++
Sbjct: 107 RAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K ++ + K +L K S+ G + + +F++ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P +Q G I + D ++ KA + + K++ +K+++
Sbjct: 202 EVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKVQDGAFMNDLMMKEIKKA 261
>gi|228951513|ref|ZP_04113619.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228808220|gb|EEM54733.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 290
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 101/300 (33%), Gaps = 40/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ N + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQ 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + + +QGI + K
Sbjct: 53 TLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLMKQQGIKEETIK 104
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V + + ++ A + K E +L + + +
Sbjct: 105 NSVRAQLAQEKAV------EQSITDKDLKAKFEDYKK----EIKASHILVKDEETAKKVK 154
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F+ +K +
Sbjct: 155 DELAQ-GKSFEELAKQYSEDTGSKEK---------GGDLGFFGPGKMVKEFEEAAQKLKK 204
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + D KA + K + + +K+++
Sbjct: 205 GEVSEPVKTQFGYHIIKVTDNHADATFDKAKADIKKALVQEKTQDAQFMNDLMMKEIKKA 264
>gi|317154730|ref|YP_004122778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
aespoeensis Aspo-2]
gi|316944981|gb|ADU64032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
aespoeensis Aspo-2]
Length = 632
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/360 (12%), Positives = 100/360 (27%), Gaps = 95/360 (26%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIA------- 61
+K+L +++ + ++ I T+N ++IT + +R A
Sbjct: 13 IVKILFGIIIVVFVFAFGMSGLETGQ--DPILATVNDQIITRAEFEDAFQRAAEGVRTAN 70
Query: 62 --LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----------- 108
+ Q + + +++ + ELI L E + GI+ V +
Sbjct: 71 PDVTPAQLQDPQFKQMVLGELINSRLLLHEAARLGISASDEEVFAAITRQSYFWNQAGAF 130
Query: 109 -----HAR---------------NTGLSAEDFSSFLDKQGI------------------- 129
A + A + K G+
Sbjct: 131 DRDIYMAALRSIRMTPALFEANFKNEMIAGKVQDMVRKTGVATPEQARQIFDWVGEEVRV 190
Query: 130 -----GDNHFKQYLAIQ--------------SIWPDVVKNDFML----------KYGNLE 160
F + + + P+ V+ ++ + + E
Sbjct: 191 DYILSSPAAFAPQVRVDAKEVDEFYASNQDKFMVPEQVRIRYLAFTPKDLAARQEVSDPE 250
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
++ + +L D+ + ++ DA ++ + D L
Sbjct: 251 IDAYFAANSASMKQEEQVKASHLLIMTSDSDSDEEQAEARKKIDAAYAKAKAGGDFATLA 310
Query: 221 KFAS-KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
+ S G + D+ P+F Q + + P TQ G I + D+++
Sbjct: 311 RQNSEGPSAAGGGDLGWFGRGDMVPEFEQAAFSTPKGQVSEPVRTQFGWHIIYVEDRKEA 370
>gi|229068819|ref|ZP_04202115.1| Foldase protein prsA 2 [Bacillus cereus F65185]
gi|229078459|ref|ZP_04211020.1| Foldase protein prsA 2 [Bacillus cereus Rock4-2]
gi|229189353|ref|ZP_04316373.1| Foldase protein prsA 2 [Bacillus cereus ATCC 10876]
gi|228594147|gb|EEK51946.1| Foldase protein prsA 2 [Bacillus cereus ATCC 10876]
gi|228704881|gb|EEL57306.1| Foldase protein prsA 2 [Bacillus cereus Rock4-2]
gi|228714327|gb|EEL66206.1| Foldase protein prsA 2 [Bacillus cereus F65185]
Length = 285
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VSDEEVNKEVEKVKKQYG---DQFKKVLENNGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|226227552|ref|YP_002761658.1| putative peptidyl-prolyl cis-trans isomerase [Gemmatimonas
aurantiaca T-27]
gi|226090743|dbj|BAH39188.1| putative peptidyl-prolyl cis-trans isomerase [Gemmatimonas
aurantiaca T-27]
Length = 463
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 85/260 (32%), Gaps = 31/260 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN-------GELEKIAVQELIVETLKKQEIEK 92
I + +VI ++ + + Q +LE+ A+Q+LI L Q+ +
Sbjct: 48 DGIAAIVGDQVILVSEVMSSVNSARAQGAKIESAKDLSKLEQDALQQLIEAELLVQKAKL 107
Query: 93 SGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIG---------DNHFKQYLAI 140
I + + + AR + +F L + G G + ++
Sbjct: 108 EKIEVNDVELQSGVDSREKQARGNFSTDAEFRQALKENGFGTVEEWRKMQLDAARRSKLQ 167
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK---NITVREYLIRTVLFSIPDNKLQNQGF 197
Q + + ++ + EI ++ K +R ++ + K
Sbjct: 168 QEVMQKLQRDGKVTAVNVTNAEIDEAYEEAKTQLPRKEARVGMRQIVVAT---KPSEDAK 224
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIH-DVS---IGKAQYLLESDLHPQF-QNLLKK 252
+ R+K + R +L K E A + D + G + + P+F + +
Sbjct: 225 KKARVK-IDSLRAQLDKHPEDFENIAKRESMDGTRELGGDLGWNRRGRMVPEFDRMMFAL 283
Query: 253 SQNNTTNPYVTQKGVEYIAI 272
+ + T G I +
Sbjct: 284 NPGVISPVLETGFGYHIIRV 303
>gi|218896199|ref|YP_002444610.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus G9842]
gi|228964209|ref|ZP_04125331.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|218545279|gb|ACK97673.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus G9842]
gi|228795460|gb|EEM42945.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 285
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T +T D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNESATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VSDEEVNKEVEKVKKQYG---DQFKKVLENNGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|332885976|gb|EGK06220.1| hypothetical protein HMPREF9456_00094 [Dysgonomonas mossii DSM
22836]
Length = 460
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 100/265 (37%), Gaps = 32/265 (12%)
Query: 40 SRIRTTINGEVITDGDISK-RIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
I + E I D+ K R+ +L + ++I G+ + ++L V+ L + + I
Sbjct: 28 DEIIWVVGDEAILKSDVEKVRLGMLSRGERIEGDPYCLIPEQLAVQKLFLDQAKIDSIEV 87
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
++ VN ++ N + + G + + W + ++N+++
Sbjct: 88 PASAVNSQLSRYENNVIANLGSKEKAEEYLGSTMSQLRDE------WREQIRNEYL--VS 139
Query: 158 NLEMEIPANKQKMKNITVREYLIR---------------TVLFSIPDNKLQNQGFVQKRI 202
++ + K + VR+Y + ++ + P L++ V+ R+
Sbjct: 140 EVKKSLVGKKTNLTPSEVRKYYAQLPKDSLPYIPTMVEVQIITNEPVIPLKDIDQVKDRL 199
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL--LKKSQNNTT 258
+D D L S+ + G+ ++ ++L P+F ++ +
Sbjct: 200 RDYTNRINSGTADFATLAIMYSEDPGSAPNGGELGFMGRAELLPEFSSVGFSLSDPKKVS 259
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIA 283
N T+ G I + ++R G+ A
Sbjct: 260 NIVETEYGFHIIQLIERR---GDRA 281
>gi|312134560|ref|YP_004001898.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
owensensis OL]
gi|311774611|gb|ADQ04098.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
owensensis OL]
Length = 335
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 107/309 (34%), Gaps = 29/309 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRI--------- 60
+ VL+I I + +R +NGE IT + I+ +
Sbjct: 7 IMLFSIVSIVLLIIVIAVTPEIVKYMDENRAVAIVNGEKITKKEFAINYKSQINYYGLDK 66
Query: 61 ALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT---VNYFFVQHARNT 113
A L + + E+ ++ LI+ ++ Q+ K IT S ++ Q+ ++
Sbjct: 67 AFLSQKVGDKTYEQQIKEDILDSLILRQIELQQARKRNITLTSAEKKAIDQQIEQY-KSD 125
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
S +F +L G +N FK + Q I + K + E+E N K
Sbjct: 126 SQSGAEFKQYLQTIGATENDFKDQVIKSQIISKLYDEVTKSQKASDAEIESYYNSHKSDF 185
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-- 230
+ E +LF + D+K + + ++ + KL + S+
Sbjct: 186 V---EVKASHILFKVNDSKEETAKKK---KAEEVLQMIKSGQSFEKLAQKYSEDETTKQK 239
Query: 231 IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G Y + + +F++ + +N T G I + DK+ L S
Sbjct: 240 GGDLGYFRKGQMVKEFEDAAFSLNIGEVSNVVKTSYGFHIIKVADKKQLSLNDVKDEIKS 299
Query: 290 AQNTPTKIE 298
+ K E
Sbjct: 300 TVESQKKDE 308
>gi|148284256|ref|YP_001248346.1| hypothetical protein OTBS_0439 [Orientia tsutsugamushi str.
Boryong]
gi|146739695|emb|CAM79505.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 291
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 9/138 (6%)
Query: 21 VLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GE 71
+L F + +V S A +++I ++G IT + K ++ + E
Sbjct: 4 ILTFFLTIIVVCNSSGALAATKIVAIVDGTPITSHQLDKFGKVITFLHRSQSLTSISDSE 63
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L IA++ LI + E ++ GI + +N F + L + F + + +
Sbjct: 64 LTTIALEALIDRVIFLNEAKRYGIEASQDEINQFIAMEEKAINLPDQYFKYAIKEAEVSY 123
Query: 132 NHFKQYLAIQSIWPDVVK 149
+ F + ++ I + +
Sbjct: 124 DAFMMFYEVRVIISKINR 141
>gi|206967650|ref|ZP_03228606.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH1134]
gi|206736570|gb|EDZ53717.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH1134]
Length = 289
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 98/300 (32%), Gaps = 41/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V + + ++ A + K E +L + + +
Sbjct: 104 TGVRAQLAQEKAV------EQSITDKDVKAKFEDYKK----EIKASHILVKDEETAKKVK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F+ +K +
Sbjct: 154 DELAQ-GKSFEELAKQYSEDTGSKEK---------GGDLGFFGPGKMVKEFEEAAQKLKK 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + D K + K + + +K+++
Sbjct: 204 GEVSEPVKTQFGYHIIKVTDNHADANFDKAKTDIKKSLVQEKTQDAQFMNDLMMKEIKKA 263
>gi|300704055|ref|YP_003745657.1| peptidylprolyl isomerase; exported protein [Ralstonia solanacearum
CFBP2957]
gi|299071718|emb|CBJ43042.1| Putative Peptidylprolyl isomerase; exported protein [Ralstonia
solanacearum CFBP2957]
Length = 265
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 83/281 (29%), Gaps = 52/281 (18%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I + AL+K EL A L+ L +Q+ K G+ +
Sbjct: 27 AAVVNGHAIPSAKVD---ALIKKSGQPDTPELRNRARDMLVDRELIEQDAAKRGL-LGRD 82
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNL 159
V Q AR L A +F ++ ++ KQY
Sbjct: 83 DVQEQLAQ-ARLNVLVAAEFEDYVKNSPTTEDELHKQY---------------------- 119
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
K K + +EY +L D + + + K + + +K
Sbjct: 120 ------EKIKAQFGNGKEYHAHHILV---DKEADAKAIIAKLKAGGNFEEIAKAQSKDKG 170
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQKGVEYIAICDKRD 277
+ G + P+F L + T P TQ G I + D RD
Sbjct: 171 -------SGANGGDLDWANPGTYVPEFSAALTGLKKGEITLTPVKTQFGWHVIRLDDTRD 223
Query: 278 LGG---EIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
E L ++ + +K LR A +
Sbjct: 224 AKIPAFEDVKPQLLEMMMGDQNWQRAKFQAMLKDLREKATV 264
>gi|289579378|ref|YP_003478005.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
italicus Ab9]
gi|289529091|gb|ADD03443.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
italicus Ab9]
Length = 301
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/323 (13%), Positives = 93/323 (28%), Gaps = 52/323 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ LI+ + S + + T+NGE IT+ + K +K Q +
Sbjct: 1 MKRKIALILSFGFIVFLLVSCSAKKEVVATVNGENITNAEYRKAFDQVKAQIESSPQYTK 60
Query: 72 ---------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+++ + LI + L QE K+ +T + + +
Sbjct: 61 DIWNQDYEGKKFLDVVKENVLDSLIAQKLLLQEALKNNVTVTDKEIEEEYQR-------- 112
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
++F+ I K YL I ++ + + E E+ + K+
Sbjct: 113 EKEFNK-----DITKEEVKNYLLINKLFEE-----YTKDVKVTEEELKKYYEDNKDRFET 162
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+L + D K+ + + + D ++ G
Sbjct: 163 V-KASHIL--VSDEKIAQDIYNRLMKGEDFSTLAKEYSIDTATKDQ---------GGDLG 210
Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
+ P+F+ + + + P T G I + +
Sbjct: 211 EFARGVMVPEFEQVAFSLKKGEISKPVKTDYGYHIIKSEGATLKSFDEVKGDIEAYLLND 270
Query: 295 TKIEKHEAEYVKKLRSNAIIHYY 317
K + +Y L A I +
Sbjct: 271 KKNQVITEKY-DALEKAAKIQKF 292
>gi|300311558|ref|YP_003775650.1| peptidyl-prolyl cis-trans isomerase [Herbaspirillum seropedicae
SmR1]
gi|300074343|gb|ADJ63742.1| peptidyl-prolyl cis-trans isomerase protein [Herbaspirillum
seropedicae SmR1]
Length = 258
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 96/296 (32%), Gaps = 51/296 (17%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVE 83
+V + + S ++ +NG+ I + + Q L +ELI
Sbjct: 8 LLVLLFAIASIPAFAQNLAVVNGKAIPSSRAELMVKQMTAQGQPDSPQLRGAIKEELINR 67
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ QE +K G+ ++ N + AR + +
Sbjct: 68 EILMQEADKQGLANSTDVKNQL--ELARQS----------------------------IV 97
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRI 202
++ D++ K + +I A K K +EY R +L +K
Sbjct: 98 IRALI-ADYLKKNPVSDADIKAEYDKFKAQAGDKEYHARHILVD------------KKED 144
Query: 203 KDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN- 259
+A ++L+ L K + + G + + F + ++ + T
Sbjct: 145 AEAIIAKLKAGTKFEDLAKQSKDTGSAANGGDLDWATPASFVKPFSDAMVALKKGEVTPT 204
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + D R ++ + Q +K Y ++LR+ A +
Sbjct: 205 PVQTQFGWHVIKLEDVRP--AKVPTLDEVKPQIAEALQQKKLQAYQEQLRAKAKVQ 258
>gi|222094890|ref|YP_002528950.1| peptidylprolyl isomerase [Bacillus cereus Q1]
gi|221238948|gb|ACM11658.1| protein export protein prsA [Bacillus cereus Q1]
Length = 285
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELQKAKNQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK++L +K + +I + ++ A
Sbjct: 206 QISNPVASPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|295676529|ref|YP_003605053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
gi|295436372|gb|ADG15542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
Length = 259
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 82/279 (29%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ +L++ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKSRADALIQQLVHQGQQDTPQLQQAVREELVNREILMQEALRRGL-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ V +
Sbjct: 84 DIKAQIA---------VAQQTVVLRAL------IEDFVKNNQPTDAEVTARYNALV---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +E+ + +L DN+ Q + + K A L
Sbjct: 125 ----------KDAGGKEFHLHHILV---DNEQQAKDLIAKIKAGA---------SFEDLA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
+ SK + G + P+F + + T P TQ G I + D R
Sbjct: 163 RQYSKDPGSGKNGGDLDWSDPKAYVPEFADAAAHLQKGQMTDTPVHTQFGWHIIRVDDIR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + AQ ++ + + LR NA I
Sbjct: 223 AVT--PPPLEQVRAQIVQQIQQEKLQAFEENLRKNAKIQ 259
>gi|189182933|ref|YP_001936718.1| hypothetical protein OTT_0026 [Orientia tsutsugamushi str. Ikeda]
gi|189179704|dbj|BAG39484.1| hypothetical protein OTT_0026 [Orientia tsutsugamushi str. Ikeda]
Length = 291
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Query: 21 VLIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKIN--------GE 71
+L F + +V S A +++I ++G IT + K ++ + E
Sbjct: 4 ILAFFLTIIVVCNSSGALAATKIVAIVDGTPITSHQLDKFRKVITFLHRSQSLTSISDSE 63
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L IA++ LI + E ++ GI + +N F + L + F + + +
Sbjct: 64 LTTIALEALIDRVIFLNEAKRYGIEASQDEINQFIAMEEKAINLPDQYFKYAIKESEVSY 123
Query: 132 NHF 134
+ F
Sbjct: 124 DAF 126
>gi|312621942|ref|YP_004023555.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202409|gb|ADQ45736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 340
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 106/306 (34%), Gaps = 37/306 (12%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE------------------LIV 82
R+ +NGE +T + R LK I + + L
Sbjct: 36 RVVLEVNGEQVTKREYKIRFNALKENAIQFSSRTDILDQVFNGKTYRELLKDELFTILTE 95
Query: 83 ETLKKQEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYL 138
E L QE K I + + + N + F+ +L K +NHF +
Sbjct: 96 ELLCLQEARKRNINLTKQEEEEIKKYIQELKTNEEM-RGYFNQYLRKINSDENHFYRDLY 154
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ I + K + EI KN ++ R ++ + + +
Sbjct: 155 KTRLINKLY--SSITSKTTVSDSEIINYYNTNKN----QFKKRKIIDIFLKVENEEEDAR 208
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYL----LESDLHPQFQN-LLK 251
++ I + S L+ + KL K S+ S G Y E++ F+ + K
Sbjct: 209 KREIANKIVSELKKGESFEKLVKKYSEDDGASTTKGIIDYFRKGEKEAEYGSVFEEEVFK 268
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ +N T KG + + D++ + + + + ++ K ++ Y++ L+
Sbjct: 269 LAVGQISNVIKTVKGYHIVKVLDEKYMPLDEVKE-EIQSKLMKQKKDEAFRLYIENLKKL 327
Query: 312 AIIHYY 317
+ I+ Y
Sbjct: 328 SKINVY 333
>gi|149917238|ref|ZP_01905737.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Plesiocystis
pacifica SIR-1]
gi|149821845|gb|EDM81239.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Plesiocystis
pacifica SIR-1]
Length = 441
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/308 (18%), Positives = 107/308 (34%), Gaps = 39/308 (12%)
Query: 43 RTTINGEVITDGDISKRIALLKLQK-----------INGELEKIAVQELIVETLKKQEIE 91
+N VIT G++ I LKLQK + K V LI + + +QE +
Sbjct: 46 VAKVNDVVIT-GELFHSIYDLKLQKYADRNRDIPKTADRRYRKSIVDRLIYQEILRQEAK 104
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K I +D + + A+ G+ D+ L ++G + +Q + + V++ D
Sbjct: 105 KRSIAYDKAELQQ--REDAQKRGIK--DWEKHLRRRGESEESLRQLYVAELLERAVLEAD 160
Query: 152 FMLKYGNLEMEIPANKQKMKNITVRE-YLIRTVLFSI-----PDNKLQNQGFVQKRIKDA 205
L + E+ K K +E R +L + P + + K+
Sbjct: 161 GKLAVTDEEIAGEYEKVKPNYTKDKERVRARHILIRVGPEQKPAPGEPVPEPTEAQKKEW 220
Query: 206 EESRLR-----LPKDCNKLEKFAS-------KIHDVSIGKAQYLLESDLHPQFQNL-LKK 252
EE+ L+ K + FA G + +F +
Sbjct: 221 EEAALKKAEEIYAKASAEGADFAQLAIELSEGPSARKGGDLGIFAADRMVEEFSDAAFTL 280
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPTKIEKHEAEYVKKLR 309
+ P T+ G I + K GE+ ++A L + + K+ + + + L
Sbjct: 281 EPGEVSKPVKTKFGFHIIKVEGK-YAPGELPIEALEDQLRERLSARKLHQGRRDLKESLL 339
Query: 310 SNAIIHYY 317
+ + +
Sbjct: 340 ESYAVENH 347
>gi|218781644|ref|YP_002432962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
gi|218763028|gb|ACL05494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
Length = 358
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/335 (14%), Positives = 104/335 (31%), Gaps = 32/335 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALL-------- 63
L+ + + + + S ++ +NG IT ++ + +L
Sbjct: 8 ALVIAMLLAWVIPGAALAEAGADDGSEKVVAVVNGASITQAELDQALMQGMLNATKGMQL 67
Query: 64 ---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ Q+ + + +LI++ L QEIEK IT + + +++
Sbjct: 68 SPEQAQRFKSQYSGRVLDKLIMDELLSQEIEKRKITAAPGEMAKALSEQLELQLMASGRT 127
Query: 121 SSFLDKQGIGD--NHFKQYLAIQSIWPDVVK-------NDFMLKYGNLEMEIPANKQKMK 171
++ + + Q++A + P+V + + K
Sbjct: 128 KKEYEESDLKAKGQTWDQFIAGIAARPEVAHMYLLEKMAKTIAPEKVKVTDAEIRKFYDD 187
Query: 172 NITVR-----EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFAS 224
N+ R E +LF D K + K+ + + P +++S
Sbjct: 188 NLESRFTKPEEVRASHILFGTKDAKTAEEKEAIKKQAQEVLLKAKKPGADFAALAREYSS 247
Query: 225 KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-- 281
G + + + P+F + +N TQ G I + DK
Sbjct: 248 CPSKEKGGDLNFFTKERMVPEFSKAAFSMEVGEISNLVETQFGYHIIKVTDKTPAEVRPF 307
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + ++++ L+ A I Y
Sbjct: 308 ESAALAIRKGLETQRVQQELMTLANGLKEKATITY 342
>gi|187734800|ref|YP_001876912.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia
muciniphila ATCC BAA-835]
gi|187424852|gb|ACD04131.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia
muciniphila ATCC BAA-835]
Length = 384
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 110/313 (35%), Gaps = 23/313 (7%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-------------KINGELEK 74
P + + +RI T+NG IT ++S R+ + Q K +K
Sbjct: 71 APASRVQPQRIVNRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPEFYKQLALAKK 130
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARNTGLSAEDFSSFLDKQGIGDNH 133
+++L+ L + E E G + ++ + F L G+
Sbjct: 131 NIIEDLVERELLRNEFEGMGGVIRDSLIDQEVNRTILTTFNGDRSAFLKNLSLSGMTIRA 190
Query: 134 FKQ----YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F++ L +Q + + ++ E + K++ +++T + + + +
Sbjct: 191 FREMTKKQLQVQIMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIKFKKIFIPMLG 250
Query: 190 NKLQNQGFVQKRIKD--AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ + VQ + + A+E + + ++++ ++ G S L P+
Sbjct: 251 DDSASTPEVQLNLAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVTERSTLSPESA 310
Query: 248 NLL-KKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
++ P V G + + K A+K + + + ++
Sbjct: 311 AIIFGAQPGEIIGPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARNKRSNERYKKW 370
Query: 305 VKKLRSNAIIHYY 317
V++LR AI+ Y
Sbjct: 371 VERLRKKAIVKIY 383
>gi|91974780|ref|YP_567439.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB5]
gi|91681236|gb|ABE37538.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB5]
Length = 305
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 95/311 (30%), Gaps = 52/311 (16%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQ 66
S FI T + P+ + ++ + +NG I D++ L Q
Sbjct: 14 SGFISAAATGCLAFALLASPMAHAE---DANPVLAKVNGAEIRQSDVALAEEELGPSLAQ 70
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + LI + + E I D A L +D + K
Sbjct: 71 MDPATKKENVLAFLIDMKIVAKAAEDKKI-ADRAEFKKRLE-FA-RNRLLMDDLLAVEGK 127
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
++ K+ + A KQ +E R +L
Sbjct: 128 NATTNDAMKK------------------------VYEDAAKQISGE---QEVHARHILVE 160
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQ 245
D+ ++K D +L K SK S G + + + P+
Sbjct: 161 SEDDAKAVAEELKK------------GADFAELAKKKSKDPGASDGGDLGFFTKEQMVPE 208
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F + ++P +Q G I + +KR + + T+ K +A+Y
Sbjct: 209 FSAVAFAMEPGKISDPVKSQFGWHIIKVEEKRSRKPPTFDQVKPQIEQYVTR--KAQADY 266
Query: 305 VKKLRSNAIIH 315
V +LR A +
Sbjct: 267 VAQLRQAAKVE 277
>gi|296157842|ref|ZP_06840676.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
Ch1-1]
gi|295892088|gb|EFG71872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
Ch1-1]
Length = 259
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 82/279 (29%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ +L+ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQTAVREELVNREILMQEALRRGL-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ + V +
Sbjct: 84 DIKAQIA---------VAQQTVVLRAL------IEDFVKNNTPTDAEVTARYNALI---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A L
Sbjct: 125 ----------KDAGGKEYHLHHILV---DNEQQAKDLIAKIKAGA---------SFEDLA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
+ SK + G + P+F + + T P TQ G I + D R
Sbjct: 163 RQYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + Q ++ + + LR NA I
Sbjct: 223 NIT--PPPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259
>gi|91204225|emb|CAJ71878.1| similar to peptidyl-prolyl cis-trans isomerase [Candidatus Kuenenia
stuttgartiensis]
Length = 311
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/321 (14%), Positives = 98/321 (30%), Gaps = 36/321 (11%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--E 71
+ V ++F + ++ + I +NG+ I D+ KR+ + K +
Sbjct: 5 AVFYLCAVFLLFPAIICFP-ENPLLGENIAVVVNGKKIKKDDVDKRLNMFKDADVETYNA 63
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF----VQHARNTGLSAEDFSSFLDKQ 127
+ + +++LI + L + I+K GI ++ + A N G + L
Sbjct: 64 IRQEIIEQLITDILLEDFIDKQGIVVTPMEMSRELLLIKKEIADNEGEADAFLRDMLASI 123
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G F++ + F + ++ K K + + I
Sbjct: 124 GSNLYDFEKTIKHSLALEKY----FKGSLDSQNLKRFFEKNK-HFFNGEAVRVSHIF--I 176
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCN------KLEKFASKIHDVSIGKAQYLLESD 241
K + V+K + + L K + + S +G Q +
Sbjct: 177 DTKKFNSGDMVEKVAQLINTLKSELDKGSDFEELAREYSDCPSASKGGDLGFIQRRGGTY 236
Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-------EIALKAYLSAQNTP 294
P + P ++ G I + K++ + L +
Sbjct: 237 DEPFLSTAFSLRIGKVSEPVKSEYGYHLIKVTGKKEGVAVNFEDVIDDVRSTMLDEEILG 296
Query: 295 TKIEKHEAEYVKKLRSNAIIH 315
+K+LRS A I
Sbjct: 297 ---------LLKRLRSEAKIE 308
>gi|229195463|ref|ZP_04322231.1| Foldase protein prsA 2 [Bacillus cereus m1293]
gi|228588003|gb|EEK46053.1| Foldase protein prsA 2 [Bacillus cereus m1293]
Length = 285
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELQKAKNQYG---DQFKNVLRNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK++L +K + +I + ++ A
Sbjct: 206 QISNPVTSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|288818384|ref|YP_003432732.1| hypothetical protein HTH_1073 [Hydrogenobacter thermophilus TK-6]
gi|288787784|dbj|BAI69531.1| hypothetical protein HTH_1073 [Hydrogenobacter thermophilus TK-6]
gi|308751977|gb|ADO45460.1| SurA domain protein [Hydrogenobacter thermophilus TK-6]
Length = 290
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 108/308 (35%), Gaps = 33/308 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K L I+ + S + + ++ ++NGE I + D+ Q
Sbjct: 4 KGLKGISCGILLLATLVASAFAQKLVDKVIASVNGEPILESDVKLAELFYGTQD-----R 58
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ +L+ L Q +E G ++ + A+ E + L K+ + +
Sbjct: 59 HKVINKLVDVYLLAQFLESRGGRVPEEYISATLMDIAKANNTDLEGLAKELAKEELTLDD 118
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K++L + + + + ++++ K K + L R + + D K
Sbjct: 119 LKRFLEKELLSTQGLSIYLSKEIKVSDLDVELEKLKRGEVK----LRRDIDLLVLDKKDG 174
Query: 194 NQGF--VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ +++R + +R F++K+ +S+ + DL +
Sbjct: 175 EKLLKMMEERKTLQDIARA-----------FSAKVESLSV------EKGDLVEPLDKEVW 217
Query: 252 KSQNNTTNPYVTQKGVEYI--AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K+ V + G + D++++ + L + KIE+ E ++ L+
Sbjct: 218 KAP--LNTLVVAEDGEHIYLAQVKDQKEIYSG-VSEDELRKEILAKKIEEKRRELLENLK 274
Query: 310 SNAIIHYY 317
+ + +
Sbjct: 275 KKSFVKIF 282
>gi|189499014|ref|YP_001958484.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides BS1]
gi|189494455|gb|ACE03003.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides BS1]
Length = 440
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 19/281 (6%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--- 66
+ F++L+ F+++ A++ RI + E+I + ++ + +LQ
Sbjct: 5 NRFLRLVAVVFIMV----AAGFQRAGAAVADRIVAVVGNEMIMQSQVDEQAMMARLQYTE 60
Query: 67 -KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSS 122
K + L+ ++ L+ + + I D + + + R+ S E+ S
Sbjct: 61 AKNDPSLKAGILENLVTRKIVLTKARIDSIQVDESDIEKRTDERMRFLRSKFSSIEEMES 120
Query: 123 FLDKQ-GIGDNHFKQYLAIQSIWPDVVKND-FMLKYGNLEMEIPANKQKMKNITVRE-YL 179
K + + K + Q + ++ + + E+E + K V E
Sbjct: 121 TFSKSYAVIEKEIKDDIRDQQLINNLRRQKMMGVNVTYEEVEDFYGANRDKLPVVPEAVE 180
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+ V+ + +A + RLR ++ L + S+ + G Y
Sbjct: 181 VSQVVMY--PKVTAEAKAKARAAIEAMQQRLRSGENFAALAREYSQDPGSARLGGDLGYS 238
Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ ++ + + + T+ G I + DK
Sbjct: 239 RRGEFVKNYEKVAFGLEEGEISGIVETRFGYHIIQLLDKEQ 279
>gi|229120788|ref|ZP_04250031.1| Foldase protein prsA 2 [Bacillus cereus 95/8201]
gi|228662793|gb|EEL18390.1| Foldase protein prsA 2 [Bacillus cereus 95/8201]
Length = 285
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKEVQKAKSQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ +K E ++ K+ E +L ++
Sbjct: 111 KFKLSMNKAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLKIGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK++L +K + +I + ++ A I
Sbjct: 208 SNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERITDPIFGKKLLQSELKKANI 266
>gi|196230321|ref|ZP_03129184.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter
flavus Ellin428]
gi|196225918|gb|EDY20425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter
flavus Ellin428]
Length = 319
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/321 (13%), Positives = 102/321 (31%), Gaps = 22/321 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---- 69
L ++ I + + ++ + I +N +V+T + + + + Q
Sbjct: 4 SRLIPLSLVCIGLAISTFTARAQEVLDGIAAVVNSDVVTFSQVRELVGPKEKQAHETLKG 63
Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAEDFS 121
E+ A+ +LI L QE + G T ++ + G + F
Sbjct: 64 QELVEKIKEIRTEAINDLIDRALIIQEFKTKGYTIPDYFIDDRIQGIIKDEFGNDRQAFL 123
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREYLI 180
L Q F+ I ++ K + +I A K+ ++ + E
Sbjct: 124 RTLAAQNYTLEKFRDLQKDMIIVSEMRKQAVKGATSVPDAKITAYYKEHLEEYSQPE--- 180
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ + + +K I + + + + + ++ G ++
Sbjct: 181 -QMKLRMIAIRGVENDSRRKMIDEIRQKIVGGAEFGDLARMYSEDSSQEQYGDWGWIDRK 239
Query: 241 DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTK 296
L+ + + G Y+ C+ + LK + T+
Sbjct: 240 KLNESLTKTAFSLKPGEMSQVVEL-GGSYYLLYCEAKKPATVKPLKDVHDEIEKVLLQTE 298
Query: 297 IEKHEAEYVKKLRSNAIIHYY 317
++ +A+++ KLR A I Y
Sbjct: 299 RQQQQADWLAKLRRKAYIKMY 319
>gi|91783535|ref|YP_558741.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
xenovorans LB400]
gi|91687489|gb|ABE30689.1| Putative peptidyl-prolyl cis-trans isomerase [Burkholderia
xenovorans LB400]
Length = 259
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 82/279 (29%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ +L+ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQMAVREELVNREILMQEALRRGL-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ + V +
Sbjct: 84 DIKAQIA---------VAQQTVVLRAL------IEDFVKNNTPTDAEVTARYNALI---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A L
Sbjct: 125 ----------KDAGGKEYHLHHILV---DNEQQAKDLIAKIKAGA---------SFEDLA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F + + T P TQ G I + D R
Sbjct: 163 KQYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + Q ++ + + LR NA I
Sbjct: 223 NVT--PPPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259
>gi|328947374|ref|YP_004364711.1| basic membrane protein [Treponema succinifaciens DSM 2489]
gi|328447698|gb|AEB13414.1| basic membrane protein [Treponema succinifaciens DSM 2489]
Length = 359
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/292 (16%), Positives = 96/292 (32%), Gaps = 39/292 (13%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIA 76
+LI F + + + ++ E IT + R ++ Q + E ++
Sbjct: 8 LLIFFAALGAFAQSDLQPLAVVKLN-KSETITVKQLKTRANFIQKQYGMESLPIEQKQAL 66
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN---TGLSAEDFSSFL--------- 124
++ LI E L Q K G++ + V+ F+ T +S +
Sbjct: 67 LENLIAEKLITQAAAKEGLSVTDSQVDDAFLNTFSQQLGTRVSEAQLEDLIKKQTGKSLD 126
Query: 125 ----DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG---NLEMEIPANKQKMKNITVRE 177
+ G+ + +K YL Q I + + + + EI + K+ V
Sbjct: 127 DYIKEYSGMSKSEYKAYLKNQLIIQQYIFSKKQSEIQAVAATDEEIRNAYEMNKSTFVWN 186
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
+++ L +P A + R + D KLE+ + + + +A +
Sbjct: 187 DMMKLFLVMVPKGSNDMAA-----RALATDLRNKYKGDSKKLEEIKNSNENGTNYRAGDI 241
Query: 238 LESDLHPQFQ----------NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ Q Q L KS + T ++ A+ + D
Sbjct: 242 TVAKTAQQAQQLGWSIDRLNELFGKSAGYLSEVTETASDFQFYAVLKRYDAK 293
>gi|297622327|ref|YP_003703761.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera
radiovictrix DSM 17093]
gi|297163507|gb|ADI13218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera
radiovictrix DSM 17093]
Length = 641
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 104/327 (31%), Gaps = 20/327 (6%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA- 61
SK ++ ++ + ++I + + + +NG+ I D+++ A
Sbjct: 4 SKQTNTVILWLIAIALLVSMVIAFTPGTLFGGAQPQQAEAALLVNGQPIRTVDVARFEAT 63
Query: 62 --LLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+Q+ +LE++ + ELI + L +Q + + + V G++
Sbjct: 64 PPFNAVQEGPAAEDLEQVLLDELIDQELLRQAASR--VNVSNAEVRARVNAFREEQGVAG 121
Query: 118 E----DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+ + G D F+ + Q +++ + E+ A+ + +++
Sbjct: 122 SANDRAYLDLIGSAGYTDESFRALMREQLQRERYLES-VAGDLEVTDEEVRAHFEANRDV 180
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
E I + D L N + + + + R + E+ + G+
Sbjct: 181 YQSEPRIVARQLVVTDEGLANDLYARALAGEDFAALAR-EHSTERAEQ--GGALGAAEGE 237
Query: 234 AQYLLESD--LHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYL 288
+ + L + Q T P +++ ++ +
Sbjct: 238 SDPRPVTRVALPTAVADAAFALQGTGLTEPIEAAGAFYIVSVEAYEPPQPRPFEEVQEQV 297
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K + ++ LR A I
Sbjct: 298 REDALAAKETGAQEAALRTLREEATIE 324
>gi|197116615|ref|YP_002137042.1| peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
[Geobacter bemidjiensis Bem]
gi|197085975|gb|ACH37246.1| peptidylprolyl cis-trans isomerase lipoprotein, PpiC-type
[Geobacter bemidjiensis Bem]
Length = 324
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 93/310 (30%), Gaps = 53/310 (17%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR-------IRTTINGEVITDGDISKRIA----LLKL 65
T +L+ C+ + ++ + +NG ITD D K A LK
Sbjct: 6 TAAVLLLALCVAATGCKQKAESEAKKGPGNGIVLAEVNGAKITDNDFYKEQAALPPYLKP 65
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
E +K + ++V L Q+ +K GI S V +
Sbjct: 66 MTETPEGKKEMLDTMVVRELILQQSKKEGID-SSAEVAAKLEDLKKRV------------ 112
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
I + K+ + + + +M+ K K K + + +L
Sbjct: 113 ---IVEAFLKKKV------------EESGNISDADMKAFYEKNKEKFQSGAQIRASHILV 157
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
Q ++K E ++ + G + + + P
Sbjct: 158 KSEAEAKDIQNQLKKGASFEELAKKHSIDGAAQ-----------KGGDLGWFSKGSMIPD 206
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEA 302
F+ + + T+ TQ G I R G K + A P + ++
Sbjct: 207 FEKVAFGLKEGETSGIVKTQFGYHIIKKTGDRPAGARSFEDVKDQIKAAMVPERQQETFK 266
Query: 303 EYVKKLRSNA 312
+ +L+ NA
Sbjct: 267 KLKDELKKNA 276
>gi|257456351|ref|ZP_05621548.1| basic membrane protein [Treponema vincentii ATCC 35580]
gi|257446437|gb|EEV21483.1| basic membrane protein [Treponema vincentii ATCC 35580]
Length = 360
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 98/294 (33%), Gaps = 38/294 (12%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---QKINGELEKI 75
++ + + + + + ++ T IT G + R++ L+ +K+ +
Sbjct: 7 TLLIALSLSIGAFAQTNLQPIAEVKLT-GRAPITLGQLKTRVSALEKEIGRKMTFAERQQ 65
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFF--------------VQHAR----NTGLSA 117
+ LI E L Q EK GI + VN +F A+ T +S
Sbjct: 66 TLDGLINERLIVQAAEKDGIKIMDSEVNNYFNEYVSSQLGQQISEADFAKLIKEKTNMSL 125
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY----GNLEMEIPANKQKMKNI 173
+++ + G+ FK +L Q V + + +I + + K
Sbjct: 126 DEYMKA--QNGMTLAEFKSFLRTQLTAQAYVMQKKQKELQSIPSPTDEQIRSYYEVNKQS 183
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
V+ ++ L P + +K IKD ++ PKD + + + +
Sbjct: 184 FVQPDTVQLFLVVAPKGDKPSAA--EKTIKDIQKKLTANPKDTADIRTKSQEKNSTYQAG 241
Query: 234 AQYLLESDLH--------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
++ ++ L + + + T + + +K+D
Sbjct: 242 EIFVSKTSLAAEQLGIPMDELLKIFNMKVGEVSPITETAVNYQCFVVIEKKDAK 295
>gi|312876097|ref|ZP_07736085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311797083|gb|EFR13424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 335
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 58/314 (18%), Positives = 108/314 (34%), Gaps = 35/314 (11%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRI------- 60
+ + VL+I I + +R +NGE IT + I+ +
Sbjct: 5 TKIVLFSIAAVVLLIILIAVTPEIVRYVDENRAVAIVNGEKITKKEFAINYKSQINYYGL 64
Query: 61 --ALLKLQKINGELEKI----AVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHAR 111
A L + + E+ + LI+ ++ Q+ K IT S ++ Q+ +
Sbjct: 65 DKAFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQARKRNITLSSAEKKAIDQQIEQY-K 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ S +F +L G +N +K + Q + + K + E+E N K
Sbjct: 124 SDSQSGTEFKQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKNQKASDAEIESYYNSHKS 183
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-- 228
+ E +LF + N + K E L++ KD EK A K +
Sbjct: 184 DFV---EVKASHILFKV------NDSKEEAAKKKKAEEILQMIKDGQNFEKLAQKYSEDE 234
Query: 229 ---VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G Y + + +F++ + ++ T G I + D++ L
Sbjct: 235 TTKQKGGDLGYFRKGQMVKEFEDAAFSLNIGEISSIVKTSYGFHIIKVTDRKQLLLSDVK 294
Query: 285 KAYLSAQNTPTKIE 298
S + K E
Sbjct: 295 DEIKSTIESQKKDE 308
>gi|313679080|ref|YP_004056819.1| ppic-type peptidyl-prolyl cis-trans isomerase [Oceanithermus
profundus DSM 14977]
gi|313151795|gb|ADR35646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanithermus
profundus DSM 14977]
Length = 621
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 93/310 (30%), Gaps = 18/310 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQKINGELEKIA 76
I I + R +NG+ I + ++ ++ L G L +
Sbjct: 16 AAAFAIGTIFLFTPQGNPQQEGRPILYVNGQPINELELMRKAQTNPLFTLNPTGVLRPLI 75
Query: 77 ----VQELIV-ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIG 130
++++I E L++ I S+ V Q G++ + + FL G
Sbjct: 76 DTYFLEQVITLEALRQDAAR---IRVSSSEVKQQVDQLRERLGVTDREGYDRFLQSIGYT 132
Query: 131 DNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
D+ + + Q I + + +K + E K + R ++
Sbjct: 133 DSQLRDEIRTQLRIQKRIDELRKKVKLTDEEARFYYELHKGEYAAEDRVKARQIVLDDQA 192
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
Q + AE +R + ++ G L+ P +
Sbjct: 193 TADQVYKQLIGGADFAELARQYSKVGAEQGGAVGAEPGSSEPGPVTRLVFPT--PVADAV 250
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVK 306
+ T T + + + G E S + + E Y++
Sbjct: 251 FQLKSGGMTEVIETGGRYYIVKVEEFLPGGDVPYEEVADRVKSDALSVKQNGAVEN-YIR 309
Query: 307 KLRSNAIIHY 316
++R A++ +
Sbjct: 310 EVRDRAVVKF 319
>gi|228938272|ref|ZP_04100886.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228971151|ref|ZP_04131783.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977759|ref|ZP_04138144.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228781967|gb|EEM30160.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228788577|gb|EEM36524.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821408|gb|EEM67419.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326938780|gb|AEA14676.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 289
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 99/300 (33%), Gaps = 41/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + + +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLMKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V + + ++ A + K E +L + + +
Sbjct: 104 NSVRAQLAQEKAV------EQSITDKDVKAKFEDYKK----EIKASHILVKDEETAKKVK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F+ +K +
Sbjct: 154 DELAQ-GKSFEELAKQYSEDTGSKEK---------GGDLGFFGPGKMVKEFEEAAQKLKK 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + D KA + K + + +K+++
Sbjct: 204 GEVSEPVKTQFGYHIIKVTDNHADATFDKAKADIKKSLAQEKTQDAQFMNDLMMKEIKKA 263
>gi|295106377|emb|CBL03920.1| Parvulin-like peptidyl-prolyl isomerase [Gordonibacter pamelaeae
7-10-1-b]
Length = 439
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/340 (11%), Positives = 105/340 (30%), Gaps = 46/340 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-------ISKRIALL---- 63
L T + C + + + + T+NG I + + I ++++
Sbjct: 15 LAATCVWGLAACADGASASGTKTYTGGVAATVNGTEIPEDEVTGMVESIRSQMSMTDADT 74
Query: 64 --KLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+ N + +E+I + L KQ ++ I+ +S+ ++ +
Sbjct: 75 WGQWLADNAMTPESVREEMIDSFAQQELIKQGAKEKNISVESSEIDDIVNKTKA-NYEDD 133
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
E + + L++ G + +++ + Q + + ++ F + ++ Q +
Sbjct: 134 EKWKAALEQAGFTEEKYRENVESQLLQKKLTES-FASDEEPSQEDLLKYAQMYASAYDGA 192
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS---KIHDVSIGKA 234
+LF ++ Q + +L + + K + G
Sbjct: 193 KRSSHILF-----DSGDEATAQSVLDQINSGQLDFAEAAKQYSKDNAEGTGGSAAKGGDV 247
Query: 235 QYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYL- 288
+ S ++ + L ++ + +Q G+ I D + +G + L
Sbjct: 248 GWDKLSSFVTEYTDALAGLEKDQVSGLVTSQYGIHIIKCTDVFNAPKVVGEDGTETVELT 307
Query: 289 -------------SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E+ + + NA I
Sbjct: 308 STDQIPVEFLDSVKESLKQQNQSTAVQEWFNEYKENADIQ 347
>gi|114566203|ref|YP_753357.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114337138|gb|ABI67986.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 324
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 82/252 (32%), Gaps = 16/252 (6%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIG 130
L+ A L+++ L +Q+ EK GI ++ N + + FL + +
Sbjct: 80 LQDQAFDSLVMQALLRQDAEKRGIKIKEKEIDVAIDSFKANLAAEGKDAYQKFLQENNLN 139
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ ++ +Q + + + E E+ Q+ ++ + +
Sbjct: 140 EKELREEARMQLLVNQL-QKKINASITIEEEELQQYYQENIASFQEAAGMQISHILVATD 198
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE-SDLHPQFQN- 248
K + Q + + C + G + E S+ P+F+N
Sbjct: 199 KEARELLTQLQQGADFAQLAQEHSSCASKAQ---------GGYLGVVNENSNYVPEFKNA 249
Query: 249 LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYV 305
L+ T P + G I + + +K + Q K ++Y+
Sbjct: 250 ALQLKAGEITQEPVKSDFGYHIIKAGQLQPTTTKSFDEVKNQIRMQLEKEKENTLFSQYM 309
Query: 306 KKLRSNAIIHYY 317
+ LR A I +
Sbjct: 310 EDLRQQAQIKDH 321
>gi|253698852|ref|YP_003020041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
gi|251773702|gb|ACT16283.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M21]
Length = 336
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 90/310 (29%), Gaps = 53/310 (17%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR-------IRTTINGEVITDGDISKRIA----LLKL 65
T +L+ C+ + + + +NG ITD D K A LK
Sbjct: 25 TAAVLLLALCVAATGCKQKAESEANKGPGSGIVLAEVNGAKITDNDFYKEQAALPPYLKP 84
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
E +K + ++V L Q+ +K GI V +
Sbjct: 85 MTETPEGKKEMLDTMVVRELILQQAKKDGIDNSP-EVASKLEDLKKRV------------ 131
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
I + + K+ + + + +M+ K K K + + +L
Sbjct: 132 ---IVEAYLKKKV------------EESANISDADMKAFYEKNKEKFQSGAQVRASHILV 176
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
Q ++ E ++ + G + + + P
Sbjct: 177 KSEAEAKDVQNQLKSGASFEELAKKHSIDGAAQ-----------KGGDLGWFSKGSMIPD 225
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEA 302
F+ + + T+ TQ G I R G K + A P + ++
Sbjct: 226 FEKVAFGLKEGETSGIVKTQFGYHIIKKTGDRPAGARSFEDVKDQIKAAMVPERQQETFK 285
Query: 303 EYVKKLRSNA 312
+L+ +A
Sbjct: 286 NLKDELKKSA 295
>gi|254293162|ref|YP_003059185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hirschia baltica
ATCC 49814]
gi|254041693|gb|ACT58488.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hirschia baltica
ATCC 49814]
Length = 322
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/322 (15%), Positives = 101/322 (31%), Gaps = 54/322 (16%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-- 57
S V ++ + LL VL + I + A + I T++G I DI
Sbjct: 9 SPVLKTVRGMLGLLGALIVLSACEDEQAILIQPTPTAADDAVIAATVDGYPIYVADIEME 68
Query: 58 ---KRIALLKLQKINGELE-KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
+ I L E + LI + L +E EK + D V +
Sbjct: 69 AESQGILLAGRTLDPSTPEFTRILNSLIDDHLLAKEAEKQNLHTDPY-VQHRLKVIRERL 127
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+ L QG+ + ++Y + ++++
Sbjct: 128 ------LGNMLLSQGVDEASIQKY--------------YETSINLKQLQL---------- 157
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
EY +R ++ + +++ + + S L + ++ + G
Sbjct: 158 -GEEYRVRQIVLPTLEAA---NAMIKQMTAETDFSVLASNRSIDEETRL-------EGGD 206
Query: 234 AQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
++ N ++ + + P+ T+KG I + +KR + L Q
Sbjct: 207 LGFINPETAPLPLANAIQNTAMGGVSKPFETRKGWVVIKVVEKRPEP--LPTLQDLRPQI 264
Query: 293 TPTKIEKHEAEYVKKLRSNAII 314
I +KKL ++ I
Sbjct: 265 WDFLIASELERLLKKLHKDSAI 286
>gi|159897379|ref|YP_001543626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Herpetosiphon
aurantiacus ATCC 23779]
gi|159890418|gb|ABX03498.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Herpetosiphon
aurantiacus ATCC 23779]
Length = 315
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/315 (15%), Positives = 101/315 (32%), Gaps = 43/315 (13%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKING--- 70
+ ++ I+ + S++ + IT+ + L L Q +G
Sbjct: 9 LLCLVIAILAGCGSEITTSQSKVLVEVGNSSITEAEF---TTFLDLNSNIINQNASGLDA 65
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-G 128
+ + ++I++ + +E K G DS +SAE + +D+ G
Sbjct: 66 NTTRQQLLDQMILQKVILEESAKLGAGIDS---------------VSAEQTTMMIDQAVG 110
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ Y + + + +I + + + V + LF I
Sbjct: 111 KEKPTYADY----EAFAKENRFGTVESMRAYVAQILTYESYAQKLEVPSATPQFHLFHIL 166
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLH--- 243
+ V + ++L+ +D + L + S + G + +
Sbjct: 167 LSSDTVSESVALEQANQVLAQLKTGEDFSILAQQYSADPGSGSNGGDLGWYTQEQYAGFV 226
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
P+F L + + P TQ G I I + R+ + + + I+
Sbjct: 227 PEFAAALNTLEIGQLSEPVKTQFGYHIIKITESRNAISFGTFQELMDSPEGNAYIQSKVE 286
Query: 303 EYVKKLRSNAIIHYY 317
EY R N +I Y
Sbjct: 287 EY----RKNDLIKNY 297
>gi|255036261|ref|YP_003086882.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
fermentans DSM 18053]
gi|254949017|gb|ACT93717.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
fermentans DSM 18053]
Length = 457
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/317 (14%), Positives = 104/317 (32%), Gaps = 24/317 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISKRIALLKLQKING 70
K + + I + +VS+ +I ++ I ++ K +
Sbjct: 5 KWIGAHLAAIFMLLCSVVSFGQGQQGVSLDKIIARVDNHYILSSELEDMYNQYKAEGRGA 64
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF---SSFLDKQ 127
+ ++ LI+ + + E +T + V+ + + F + ++
Sbjct: 65 PEKCQLLESLIINKMLLAKAEIDSVTVEDKEVD---GELNAKMNYMVQRFGSEKNIVEAY 121
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE---YLIRTVL 184
G + K L Q +V+ PA+ +K N ++ Y+ V
Sbjct: 122 GKSIENLKGELRQQVKEQKIVE-KMQRTISGNVKITPADVRKFFNSIPKDSLPYIPSEVE 180
Query: 185 F--SIPDNKLQNQGFVQKRIKDAE-ESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+ + + + R + E + R +D L + S+ + G +
Sbjct: 181 VGHIVKKGTVTREQKEKLRQQLQELKQRAEKGEDFAMLAQIYSEDLGSAKVGGDLGFAKR 240
Query: 240 SDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ P+F+ L +N +Q G I + + R G E + L + +
Sbjct: 241 GQMVPEFEGAALGLKPGEMSNVIESQFGFHLIKLIETR--GAEYHARHILLRPDYNKGTD 298
Query: 299 KHEA-EYVKKLRSNAII 314
+A + LR A+I
Sbjct: 299 MTDATRALDSLR--ALI 313
>gi|78066682|ref|YP_369451.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
gi|77967427|gb|ABB08807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
Length = 260
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 93/284 (32%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + F+ K +
Sbjct: 84 DVKAQIA------------------------------VAQQTVVLRSMIESFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A + REY + +L DN+ Q + + K A+
Sbjct: 114 AEVKARYDDLVKGAGGNREYHLHHILV---DNEQQAKDLIAKIKAGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRVDD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDIAPPPFDQV-KAQIAQQLVQQKLQAFEEG----LRQQAKIQ 260
>gi|328950420|ref|YP_004367755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus
hydrothermalis DSM 14884]
gi|328450744|gb|AEB11645.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus
hydrothermalis DSM 14884]
Length = 308
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/321 (13%), Positives = 97/321 (30%), Gaps = 37/321 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIALLK---------- 64
+ + ++ + ++P + A + ++GE I ++ + L+
Sbjct: 1 MKRFLMVGLLILLPFAA----AQQDVVVAEVDGEPILLSELDLQFELFLRGVFGQQGVPI 56
Query: 65 ---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L+ L+ ++ L+ + + Q K+G+ V + SA F
Sbjct: 57 TDELRARFAPLKAQILERLVRDRVVLQAARKAGLAASEEAVRERLMGIKEQFPDSAA-FE 115
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
S L+ GI L Y N + + + Y +
Sbjct: 116 SALEASGIPSEDVLLQLM-----------REAQTYNNYLDWLRPQLRISEPAMRLYYYLD 164
Query: 182 TVLFSIPDNKLQNQGFVQKR-IKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLL 238
F+ P+ + V+ R +A RL + L S + + G
Sbjct: 165 RASFAEPEELCVSHILVRTREEAEAVLERLNAGEAFEDLANQLSIDPGSNTTGGALGCHP 224
Query: 239 ESD-LHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+ P + + T P ++ G I + R + + +
Sbjct: 225 AGTFIEPFERAARRLEVGELTRTPVESEFGFHVIRLDGFRP--ARVPPFEAVRGEIEARF 282
Query: 297 IEKHEAEYVKKLRSNAIIHYY 317
+++ +++ L A + +
Sbjct: 283 LDRAVRQHLDYLFERAEVRTF 303
>gi|228951646|ref|ZP_04113749.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228808039|gb|EEM54555.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 269
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 73/254 (28%), Gaps = 33/254 (12%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKS---GITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
EK + L + + VN + + G + F L
Sbjct: 23 TKDNFEKQLKDRYGKDMLYEMMAQDVITKKYKVSDEEVNKEVEKVKKQYG---DQFKKVL 79
Query: 125 DKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+ G+ + FK + + + +K E ++ K+ E +
Sbjct: 80 ENNGLKDEEDFKNQIKFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHI 126
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
L ++ ++ + + + SK G Y +
Sbjct: 127 LV-------SDENEAKEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMA 176
Query: 244 PQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--H 300
P+F + K + +NP + G I + DK+DL +K + +
Sbjct: 177 PEFERAAYKLNVGQISNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVF 236
Query: 301 EAEYVKKLRSNAII 314
+ +++ A I
Sbjct: 237 SKKLLQEELKKANI 250
>gi|115522177|ref|YP_779088.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisA53]
gi|115516124|gb|ABJ04108.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisA53]
Length = 309
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 87/306 (28%), Gaps = 49/306 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---SKRIALLKLQKINGE 71
+ C++ ++ + +NG I D+ + +A Q
Sbjct: 13 RFGLACAAVTGCLLMAAVPVRAQDANPVVAKVNGTEIRQSDLTLAEEELAPNLAQMDPAA 72
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
++ + LI + + E + A DF S L
Sbjct: 73 RKENVLAFLIDMRIVAKAAE-----------DKKIADRA--------DFKSRL------- 106
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ + + ++ + M+ + E R +L D
Sbjct: 107 ----DFARNRILMDQLLAAEGKAAATGDAMKKVYEDAAKQIAGEPEVHARHILVETEDEA 162
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
++K D +L K SK + G + + + P+F
Sbjct: 163 KAVVEELKK------------GADFAELAKKKSKDPGAADGGDLGFFTKDQMVPEFSTAA 210
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ P +Q G I + +KR+ + Q K +A+YV KLR
Sbjct: 211 FALEPGKVSEPVKSQFGWHVIKVEEKRNRKA--PDFDQVKGQIETYVARKAQADYVTKLR 268
Query: 310 SNAIIH 315
+ A I
Sbjct: 269 AEAKIE 274
>gi|156741601|ref|YP_001431730.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus
castenholzii DSM 13941]
gi|156232929|gb|ABU57712.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus
castenholzii DSM 13941]
Length = 337
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/316 (15%), Positives = 102/316 (32%), Gaps = 40/316 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKING---------E 71
I ++ ++S + S+ ++ +T ++ +RI ++ LQ+ G +
Sbjct: 6 AIAAVLVVLSLAACGAGSQTVARVDNVTLTRQELDQRIDRIEKGLQQQAGTGFPLPSRLD 65
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN----TGLSAEDFSS-FLDK 126
+E+ V + I + L + GIT VN + + +G+S E L
Sbjct: 66 IEQELVSQFIDQQLTLGLARQRGITVSDADVNEQIERFRQQIQTGSGISLEQAIQEQLGL 125
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G F+ ++ + + ++ ++ I V + +L +
Sbjct: 126 PGESSPEFRLFVTYFLARQKL--GETLVSEVDIRQRISDEVMADTQRMVDVATVAHILVA 183
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
D Q RL +D L K S+ + G + + P
Sbjct: 184 TEDEAKQVIE------------RLDKGEDFADLAKELSQDPGSAENGGVYENIQRGQFVP 231
Query: 245 QFQNLL--KKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKA-----YLSAQNTPTK 296
+F + TT P TQ G I + + + A AQ P +
Sbjct: 232 EFDKAMFEDLQPGETTKTPVQTQFGWHVIRLVSRGEAPALDPANAPAVIEQRVAQELPFE 291
Query: 297 IEKHEAEYVKKLRSNA 312
+ ++ + A
Sbjct: 292 QQSALERLLQSEKQKA 307
>gi|268316845|ref|YP_003290564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
gi|262334379|gb|ACY48176.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
Length = 458
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 110/304 (36%), Gaps = 44/304 (14%)
Query: 40 SRIRTTINGEVITDGDISKRIA-LLKLQKIN--GELEKIAVQELIVETLKKQEIEK-SGI 95
I + E+I ++ +A L+ Q+I EL A+ +LI + + + + + I
Sbjct: 28 DEIVAVVGNELILRSEVDAFLAGYLQQQRIPYSDELWLEALNQLIDQKVLAEHARRDTTI 87
Query: 96 TFDSNTVNYF--------FVQHARNTGL------SAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ V Q T L + + L + F++ + +
Sbjct: 88 QISDDRVEQALQERLNQLMQQVGGQTRLEEIYGKTLTQLKAELRED------FREQMLAE 141
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY-----LIRTVLFSIPDNKLQNQG 196
+ +N + + E+ A ++ ++ L V + P K + +
Sbjct: 142 TF-----RNRKLQQIRITPSEVRAWFEQFPTDSLPTLPDLVRLSHIVRYPRPSEKARQEA 196
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKKSQ 254
F + +S + + + S+ + G +DL P+F + +
Sbjct: 197 F--EIASAIRDSIVSGRSSFEDMARRFSEDPGSAAAGGHIPDTRLADLVPEFAAVAARIP 254
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA-EYVKKLRSNA 312
+ P+ T GV + + ++R G++ ++ + ++ + EA Y++ +R +
Sbjct: 255 IGEISQPFETPFGVHILRV-NRRQ--GDLIDFNHILIRIDESQADPSEAIAYLEAVRDS- 310
Query: 313 IIHY 316
I+ Y
Sbjct: 311 ILQY 314
>gi|319943549|ref|ZP_08017831.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC
51599]
gi|319743364|gb|EFV95769.1| peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis ATCC
51599]
Length = 271
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 90/284 (31%), Gaps = 58/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGEL--EKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG+ I + + + +L Q K+ ELI L QE +K G+
Sbjct: 35 AAVVNGKAIPSSRVDEFVKILAQQGRPDTPETRKMIRDELITRELFVQEADKRGLE---- 90
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM---LKYG 157
+ L++ + + ++ N+ +
Sbjct: 91 ---------------KTPEVKQQLEQ-----------IRQDVLIRALIANELKQSPVTDA 124
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
++ E + +EY R +L +++ ++ ++ RL+ +
Sbjct: 125 EVKAEYEKLVKDSAQSGAQEYKARHILV-------ESEDEAKQIVE-----RLKKGEGFE 172
Query: 218 KLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICD 274
L K + + G + +F + K + T P TQ G I + D
Sbjct: 173 SLAKLSKDPGSGANGGDLGWNTPDTFVKEFSEAMTKLKKGEYTVIPVKTQFGYHIIQLDD 232
Query: 275 KR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + K L Q KI+ + + LR++A I
Sbjct: 233 VRAAEPPPFDQV-KPQLKQQLERQKIQALQEK----LRASAKIQ 271
>gi|217958742|ref|YP_002337290.1| peptidylprolyl isomerase [Bacillus cereus AH187]
gi|229137952|ref|ZP_04266551.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST26]
gi|217064761|gb|ACJ79011.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH187]
gi|228645609|gb|EEL01842.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST26]
Length = 285
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 94/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELQKAKNQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK+ L +K + +I + ++ A
Sbjct: 206 QISNPVASPNGYHIIKLTDKKALKPYDEVKDSIRKNLEEERISDPIFGKKLLQNELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|229028826|ref|ZP_04184927.1| Foldase protein prsA 1 [Bacillus cereus AH1271]
gi|228732397|gb|EEL83278.1| Foldase protein prsA 1 [Bacillus cereus AH1271]
Length = 288
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 101/305 (33%), Gaps = 55/305 (18%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L ++ + + + + S +I T+ G+ IT + +++ + K
Sbjct: 3 KAMLALAATSVIALSACGTGSSSDKIVTSKAGD-ITKEEFYEQM--------KTQAGKQV 53
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ +++E + + D V+ + + + G + F + L +QGI + K
Sbjct: 54 LNNMVMEKVLIK-----NYKVDDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLKT 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ Q +E +++K+ E +L ++
Sbjct: 106 GVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DEA 145
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKS 253
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 146 TAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFSSGKMVKEFEDAAYKLK 200
Query: 254 QNNTTNPYVTQKGVEYIAICDKRD-------LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P +Q G I + D ++ +I + Q E +K
Sbjct: 201 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKDDIKKEIV---QKKAQDGEFMNDLMMK 257
Query: 307 KLRSN 311
+++
Sbjct: 258 EIKKA 262
>gi|309390238|gb|ADO78118.1| SurA domain protein [Halanaerobium praevalens DSM 2228]
Length = 241
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 84/233 (36%), Gaps = 37/233 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKS-----WAMSSRIRTTINGEVITDGDISKRIALLKLQK 67
+K F+L+ +VP+ + ++ +NGE IT ++++ L ++ +
Sbjct: 1 MKKFLVSFLLLTVLMVPMNVFAQDVDSDSKQEPKVVAVVNGEEITAQELAQNAKLNQILR 60
Query: 68 ING---------------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
+L K + LI TL KQ ++ S I ++ +
Sbjct: 61 QLSQVDQQLVKLLTNSEAGNKVLADLRKAKLDSLIDNTLLKQAVKDSDINLSQEEIDEIY 120
Query: 107 ----VQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAI--QSIWPDVVKNDFMLKYGNL 159
+ + + F S L KQG + +K A Q +++ + +
Sbjct: 121 NKQKSSILKQNKMDEKQFLSVLKKQGFENEAAYKNEFANNPQIKINKLIEKEVVDNIEVS 180
Query: 160 EMEIPANKQKMKNI---TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
E EI ++ K+ T ++ + + + L+ Q Q + E+ R
Sbjct: 181 EKEIKEAYEQNKDAFAQTGQDVSYEQIKPRL-EQMLKQQKQNQAIKEYLEKLR 232
>gi|297564584|ref|YP_003683556.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus
DSM 9946]
gi|296849033|gb|ADH62048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus
DSM 9946]
Length = 632
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/326 (12%), Positives = 100/326 (30%), Gaps = 14/326 (4%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-R 59
+ +V T + F+ L I+F + + +NG +++ ++++ +
Sbjct: 4 INKRVITIIFGFLALAFLVGATILFALQGGGNLSGNRSQGPTVMWVNGRPVSELELARIQ 63
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEI---EKSGITFDSNTVNYFFVQHARNTGLS 116
L L K + +E + + + S I V + G +
Sbjct: 64 SRDPLLSSNPQGLMKPLLDTFFLEQVILTKAVQQDSSRIRVSGGEVRKALDDLKQRAGAT 123
Query: 117 A-EDFSSFLDKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
E + L++ G D+ + L + V + E++ + K T
Sbjct: 124 TKEQYDQLLNQIGYTDSQLRDELRDSLKVQKRVEEIQKKATPTPEEVKFYFDLNKANYKT 183
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
R ++ D+K + A+ L ++ + + +
Sbjct: 184 EDRVKARQIVV---DDKKLADDLYAQLKAGADFVELAKKNSKVAADQGGALGAETGKSEP 240
Query: 235 QYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSA 290
++ + + + K Q T P + + + + + G E +
Sbjct: 241 GFVTRVIFPSEVADAVFKLKQGGLTAPIASGGRYYIVKVEEFKPGGDPNFEEVKDRV-AE 299
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIHY 316
K ++ Y+ +LR + +
Sbjct: 300 DVKKIKGDQALEAYLLELRKKTQVRF 325
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 61/225 (27%), Gaps = 26/225 (11%)
Query: 114 GLSAEDFSSF----LDKQGIGDNHFKQYLAIQSIWPDV--VKNDFMLKYGNLEMEIPANK 167
L Q +Q + + + + + F+ + E+ A
Sbjct: 358 NQQIPQLIQQGLGDLAVQFFMPQALEQLITREILVSEAKKINQPFVGARDQIAREVQAYH 417
Query: 168 QKMKNITVRE----YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF- 222
K +T E Y F+IP + +K + E + K K
Sbjct: 418 TKDITVTDEEVRKYYAENPASFTIPASAEVKGISFKK---EDEAKAKAFREAALKGGKLE 474
Query: 223 -ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--------TTNPYVTQKGVEYIAIC 273
+K + ++ + L P L+ ++ N + G + I
Sbjct: 475 DLAKANGGTVTDYGKVNPGTLPPVANRLVFLTKGNFPKGPLGEVSEVVKLDDGSYQVLIV 534
Query: 274 DKRDLGGEIALKAYL---SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ R + Q K K +V +LR +
Sbjct: 535 NNRVAEKLKPFEEVADQAREQVLAQKRSKAAQAWVAELRKQTKVE 579
>gi|254975855|ref|ZP_05272327.1| putative protein export chaperone [Clostridium difficile QCD-66c26]
gi|255093242|ref|ZP_05322720.1| putative protein export chaperone [Clostridium difficile CIP
107932]
gi|255307280|ref|ZP_05351451.1| putative protein export chaperone [Clostridium difficile ATCC
43255]
gi|255314984|ref|ZP_05356567.1| putative protein export chaperone [Clostridium difficile QCD-76w55]
gi|255517659|ref|ZP_05385335.1| putative protein export chaperone [Clostridium difficile QCD-97b34]
gi|255650769|ref|ZP_05397671.1| putative protein export chaperone [Clostridium difficile QCD-37x79]
gi|260683854|ref|YP_003215139.1| putative protein export chaperone [Clostridium difficile CD196]
gi|260687514|ref|YP_003218648.1| putative protein export chaperone [Clostridium difficile R20291]
gi|306520675|ref|ZP_07407022.1| putative protein export chaperone [Clostridium difficile QCD-32g58]
gi|260210017|emb|CBA64063.1| putative protein export chaperone [Clostridium difficile CD196]
gi|260213531|emb|CBE05267.1| putative protein export chaperone [Clostridium difficile R20291]
Length = 380
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 94/285 (32%), Gaps = 24/285 (8%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEI 90
SS + TI + IT + KR+ L + E ++ +I + E
Sbjct: 87 SSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMITSDILSSEA 146
Query: 91 EKSGITFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
K I+ ++ ++ + + G++ E+F L + + + + K + + +
Sbjct: 147 AKEKISITNDQLDAQYNNLMSSIESAMGMTKEEF---LKQFDLTEKYIKDDMKKELVASK 203
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + E NK + LI+TV + ++K ++
Sbjct: 204 YLNEKSKVTDKEAENYYNKNKSNYLQVRASHILIKTVDDKGKQVSSSKKAELKKEAEEIL 263
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQ 264
+ +K++ S G + + + F+ + +N +
Sbjct: 264 KKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSNKLVESD 323
Query: 265 KGVEYIAICDKR-----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
G I D++ ++ ++ QN I+ + +Y
Sbjct: 324 YGYHIIKKTDEKYQPFEEVKSDLVSSLTSEKQNL--LIQNLKEKY 366
>gi|229132060|ref|ZP_04260923.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST196]
gi|228651460|gb|EEL07432.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST196]
Length = 285
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 101/302 (33%), Gaps = 44/302 (14%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+T+ + + I+ + + S+ I TT N IT D K+ LK + L ++
Sbjct: 5 STFIITALISILMLSACGQKNDSATIATTTNST-ITKSDFEKQ---LKDRYGKDTLYEMV 60
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
Q++I + K + V+ + G E F + L+ + + FK
Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG---EQFKATLENNRLKDEEDFK 107
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +K E ++ K+ E +L N+
Sbjct: 108 NQIKFKLALNEAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SNE 147
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254
++ K + + + ASK + G Y + P+F+ K
Sbjct: 148 NEAKEIKKKLDTGTSFEELAKQESQDLASKDNG---GDLGYFGAGKMTPEFEKAAYKLKP 204
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312
+NP + G I + DK+DL +K + ++ + ++ A
Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQDELKKA 264
Query: 313 II 314
I
Sbjct: 265 DI 266
>gi|154148224|ref|YP_001407264.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381]
gi|153804233|gb|ABS51240.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381]
Length = 271
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/301 (18%), Positives = 111/301 (36%), Gaps = 42/301 (13%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQE 79
++F + + + +++++ T++G+ ITD D++ +A + + + EL+ + +
Sbjct: 4 VLFTALSLAV--AMNLNAKVFATVDGKDITDADLTPMLAGMPGVNFEALPAELQNQVIDK 61
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L E +K+GI D L + + K I +++
Sbjct: 62 AIDLRLLINEAKKNGIEKDE---------------LYKKQLE--IAKDNIALRTWQEKEF 104
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+K + E+E NK K K I +L DN + +
Sbjct: 105 N------------NIKVSDKEIEDFYNKNKDKFIEPASIAASHILVEKEDNAKKIIADLS 152
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258
K DA + + + + S + G Y ++ + P+F K + T
Sbjct: 153 KLKGDA--LKKKFAEIAKEKSLDPSGKQN--GGDLGYFVKEQMVPEFGEAANKLKKGELT 208
Query: 259 -NPYVTQKGVEYIAICDKRDLGG-EIAL-KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P T+ G I D +D ++A K ++ K + + +K L+S A I
Sbjct: 209 KTPVKTKFGYHIILKNDAKDKKQLDLAEVKDHIKNIVKQEKFQADFEKKIKDLKSKAKIE 268
Query: 316 Y 316
Y
Sbjct: 269 Y 269
>gi|222529840|ref|YP_002573722.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
bescii DSM 6725]
gi|222456687|gb|ACM60949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
bescii DSM 6725]
Length = 340
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/306 (17%), Positives = 107/306 (34%), Gaps = 37/306 (12%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE------------------LIV 82
R+ +NGE +T + R LK I + + L
Sbjct: 36 RVVLEVNGEQVTKREYKIRFNALKENAIQFSSRTDILDQVFNGKTYRELLKDELFTILTE 95
Query: 83 ETLKKQEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYL 138
E L QE K I + + + N + F+ +L K +NHF +
Sbjct: 96 ELLCLQEARKRNINLTKQEEEEIKKYIQELKANEEM-RGYFNQYLRKIDSDENHFYRDLY 154
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ I + K + EI KN ++ R ++ + + +
Sbjct: 155 KTRLINKLY--SSITSKTTVSDSEIVNYYNTNKN----QFKKRKIIDIFLKVENEEEDAR 208
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYL----LESDLHPQFQN-LLK 251
++ I + S L+ ++ KL K S+ S G Y E++ F+ + K
Sbjct: 209 KREIANKIVSELKKGENFEKLVKKYSEDDSASTTKGIIDYFRKGEKEAEYGSVFEEEVFK 268
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ +N T KG + + D++ + + + + ++ K ++ Y++ L+
Sbjct: 269 LAVGQISNVIKTVKGYHIVKVLDEKYMPLDEVKE-EIQSKLMKQKKDEAFRLYIENLKKL 327
Query: 312 AIIHYY 317
+ I+ Y
Sbjct: 328 SKINVY 333
>gi|171060558|ref|YP_001792907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
gi|170778003|gb|ACB36142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
Length = 336
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/335 (14%), Positives = 109/335 (32%), Gaps = 24/335 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59
M + TS + ++ ++T + + V +S S +NG I + ++
Sbjct: 1 MNALPVTSATVRLRRVSTGLLTALVMGVASLSSGPALAQSVFAARVNGVGIPAQRLERQF 60
Query: 60 ----------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
IA L+ EL + A+ LI L Q+ G+ D V +
Sbjct: 61 EALLRERQIHIARLQNPARARELRREALDRLIGIELLGQQARALGLEADDAAVERAITE- 119
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
AR+ SAE F+ + +G + +++ + + + E +I A +
Sbjct: 120 ARSRFRSAEVFAQRIAIEGHDEASHREHTRKLLSGERLAQRIVDREVHITEADIAAFHEA 179
Query: 170 MKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ R + +R +L ++P + + +A R R + L + S
Sbjct: 180 NPALFRRPEQVRVRQLLVALPADAEPALKAQARSRIEALLVRARAGESFEALARTHSDAP 239
Query: 228 ----DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
++ + + + T G + + + D+R +
Sbjct: 240 TRQWGGALDPFGRGSQPRAIEDAA--FALAPGALSEVIETSAGWQILQL-DERIAAVSVP 296
Query: 284 LKAY---LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
L + + ++ + +LR +
Sbjct: 297 LDEVRERIRRHLHDGRGQQAVEREIARLREQGRVE 331
>gi|126699880|ref|YP_001088777.1| putative protein export chaperone [Clostridium difficile 630]
gi|255101406|ref|ZP_05330383.1| putative protein export chaperone [Clostridium difficile QCD-63q42]
gi|115251317|emb|CAJ69148.1| Peptidyl-prolyl cis-trans isomerase, PpiC-type [Clostridium
difficile]
Length = 380
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 94/285 (32%), Gaps = 24/285 (8%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEI 90
SS + TI + IT + KR+ L + E ++ +I + E
Sbjct: 87 SSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMITSDILSSEA 146
Query: 91 EKSGITFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
K I+ ++ ++ + + G++ E+F L + + + + K + + +
Sbjct: 147 AKEKISITNDQLDAQYNNLMSSIESAMGMTKEEF---LKQFDLTEKYIKDDMKKELVASK 203
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + E NK + LI+TV + ++K ++
Sbjct: 204 YLNEKSKVTDKEAENYYNKNKSNYLQVRASHILIKTVDDKGKQVSSSKKAELKKEAEEIL 263
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQ 264
+ +K++ S G + + + F+ + +N +
Sbjct: 264 KKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSNKLVESD 323
Query: 265 KGVEYIAICDKR-----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
G I D++ ++ ++ QN I+ + +Y
Sbjct: 324 YGYHIIKKTDEKYQPFEEVKSDLVSSLTSEKQNL--LIQNLKEKY 366
>gi|52144166|ref|YP_082662.1| peptidylprolyl isomerase [Bacillus cereus E33L]
gi|51977635|gb|AAU19185.1| peptidyl-prolyl cis-trans isomerase (protein export protein)
[Bacillus cereus E33L]
Length = 285
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKDSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSEDDVDKEVQKAKSQYG---DQFKNILKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ A+ + E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDVKAHYK-------PEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLD-----VGASFEELAKQESQDLLSKEKGGDLGYFNSGRMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK++L +K + +I + ++K A
Sbjct: 206 QISNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|163939063|ref|YP_001643947.1| peptidylprolyl isomerase [Bacillus weihenstephanensis KBAB4]
gi|229166104|ref|ZP_04293865.1| Foldase protein prsA 2 [Bacillus cereus AH621]
gi|163861260|gb|ABY42319.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
weihenstephanensis KBAB4]
gi|228617326|gb|EEK74390.1| Foldase protein prsA 2 [Bacillus cereus AH621]
Length = 285
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 101/302 (33%), Gaps = 44/302 (14%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+T+ + + I+ + + S+ I TT N IT D K+ LK + L ++
Sbjct: 5 STFIITALISILMLSACGQKNDSATIATTTNST-ITKSDFEKQ---LKDRYGKDTLYEMV 60
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
Q++I + K + V+ + G E F + L+ + + FK
Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG---EQFKATLENNRLKDEEDFK 107
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +K E ++ K+ E +L N+
Sbjct: 108 NQIKFKLALNEAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SNE 147
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254
++ K + + + ASK + G Y + P+F+ K
Sbjct: 148 NEAKEIKKKLDTGTSFEELAKQESQDLASKDNG---GDLGYFGAGKMTPEFEKAAYKLKP 204
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312
+NP + G I + DK+DL +K + ++ + ++ A
Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQDELKKA 264
Query: 313 II 314
I
Sbjct: 265 DI 266
>gi|255657457|ref|ZP_05402866.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-23m63]
gi|296449052|ref|ZP_06890842.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296262145|gb|EFH08950.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
Length = 331
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 100/320 (31%), Gaps = 28/320 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------- 66
+ L+I I+ + + T+ G I+ + K IAL K
Sbjct: 1 MKKVITLVIAMILVVSVTACNSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDI 60
Query: 67 ---------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
K + + + + +LI + + +K + V F + G
Sbjct: 61 WDKEVEKGVKYKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMG-KD 119
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVR 176
E + L K GI D + + N F K + E+ K+
Sbjct: 120 EKYKEQLKKLGIDDEFLRDQQEKDLAMQNYQSN-FTKKTKISDEEMKKYYDTHKDEFKKD 178
Query: 177 EYLIRTVLFSIPDNK----LQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSI 231
E +L D+ + K+ + ++ +D K +K++
Sbjct: 179 EVEASHILLKTVDDNNKPLSAKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDASASDG 238
Query: 232 GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLS 289
GK + + +F++ + ++ TQ G I + D+ + K +
Sbjct: 239 GKLGFFSRGQMVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIK 298
Query: 290 AQNTPTKIEKHEAEYVKKLR 309
Q K ++ + K+ +
Sbjct: 299 DQLLKNKYQEQIEKLTKEAK 318
>gi|186475788|ref|YP_001857258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
gi|184192247|gb|ACC70212.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
Length = 259
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 89/282 (31%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L Q L++ +EL+ + QE + GI
Sbjct: 25 IAVVNGTPIPKSRADALVAQLVQQGQQDSPKLQQAVREELVNREILMQEAIREGI-PSKP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + ++ K +
Sbjct: 84 EVKAQVA------------------------------VAQQTVVLRALIESYVKKNQPTD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A ++ K I +EY + +L ++ ++++ L
Sbjct: 114 AEVKAKYDELVKQIGGKEYHLHHILVE------------NEQQAKDLIAKIKGGASFEDL 161
Query: 220 EKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICDK 275
K SK + G + P+F +K Q T+ P TQ G I + D
Sbjct: 162 AKQFSKDPGSGKNGGDLDWSDPKAYVPEFAAAAEKLQKGQMTDEPVHTQFGWHIIRVDDV 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R +KA ++ Q K++ E LR+ A +
Sbjct: 222 RQTPPPPFEQVKAQIAQQMQQEKLQAFEEN----LRAKAKVQ 259
>gi|39933588|ref|NP_945864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris CGA009]
gi|39647434|emb|CAE25955.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris CGA009]
Length = 311
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 85/279 (30%), Gaps = 49/279 (17%)
Query: 42 IRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ +NG I D+ + + Q ++ + LI + + E I
Sbjct: 43 VLAKVNGAEIRQSDVDLAEQELGPSLAQLDPASRKENVLAFLIDMKIVAKAAEDKKIQ-- 100
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
DF L + + + DV+ + +
Sbjct: 101 -----------------DNADFKKRL-----------DFARNRLLMDDVLAAEGKAATTD 132
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
M+ ++ + +E R +L D ++K D +
Sbjct: 133 EAMKKVYDEAAKQISGEQEVHARHILVETEDEAKAVAEELKK------------GADFAE 180
Query: 219 LEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L K SK S G + + + P+F ++P TQ G I + +KR
Sbjct: 181 LAKKKSKDPGASDGGDLGFFTKDQMVPEFSAAAFALEPGKISDPIKTQFGWHIIKVEEKR 240
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + T+ K +++YV KLR A I
Sbjct: 241 NRKPPSFDQVKAQIEQYVTR--KAQSDYVSKLRQAAKIE 277
>gi|170740805|ref|YP_001769460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp.
4-46]
gi|168195079|gb|ACA17026.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium sp.
4-46]
Length = 295
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 94/312 (30%), Gaps = 53/312 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA---MSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ L L++ +P V+ + A + +NG +T D++ L
Sbjct: 4 VSLSWRTAALVLGLALPAVAQTAPAPNPAPDTVVARVNGSPVTAADLAVAADDPALSLPG 63
Query: 70 GELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
E+ V ++ L Q EK+ + L +++ K
Sbjct: 64 VSDEQKKGLLVDYMVDLKLGAQAAEKAKVAESP-DFTRKLAYF--RDKLLLDEYLEREAK 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + + + L+ E E R +L
Sbjct: 121 KAVTPEA--------------ARKLYDDTVKTLKPEE-------------EVHARHILV- 152
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHP 244
N+ +K +R++ +D +K+ SK G + + + P
Sbjct: 153 ------DNEADAKKI-----AARIKGGEDFSKVAAETSKDPGSKAEGGDLGWFTKERMVP 201
Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
F K Q ++P TQ G I + +KR + + Q K + +
Sbjct: 202 AFAEAAFKLDQGKVSDPVRTQFGWHVIKVEEKRTKP--VPGFDEMKEQIDTYLTRKTQQD 259
Query: 304 YVKKLRSNAIIH 315
+ KLR A I
Sbjct: 260 IITKLREQAKIE 271
>gi|126701124|ref|YP_001090021.1| putative foldase lipoprotein [Clostridium difficile 630]
gi|254977125|ref|ZP_05273597.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-66c26]
gi|255094454|ref|ZP_05323932.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile CIP 107932]
gi|255102710|ref|ZP_05331687.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-63q42]
gi|255308531|ref|ZP_05352702.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile ATCC 43255]
gi|255316205|ref|ZP_05357788.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-76w55]
gi|255518867|ref|ZP_05386543.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-97b34]
gi|255652046|ref|ZP_05398948.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-37x79]
gi|306521784|ref|ZP_07408131.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile QCD-32g58]
gi|115252561|emb|CAJ70404.1| Peptidylprolyl isomerase PrsA-like [Clostridium difficile]
Length = 331
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 101/320 (31%), Gaps = 28/320 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--------- 66
+ L+I I+ + + T+ G I+ + K IAL K
Sbjct: 1 MKKVITLVIAMILVVSVTACSSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDI 60
Query: 67 ---------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
K + + + + +LI + + +K + V F + G
Sbjct: 61 WDKEVEKGVKYKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMG-KD 119
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVR 176
E + L K GI D + + N F K + E+ K+
Sbjct: 120 EKYKEQLKKLGIDDEFLRDQQEKDLAMQNYQSN-FAKKTKISDEEMKKYYDTHKDEFKKD 178
Query: 177 EYLIRTVLFSIPDNKLQ----NQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSI 231
E +L D+ + + K+ + ++ +D K +K++
Sbjct: 179 EVEASHILLKTVDDNNKPLSDKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDTSASDG 238
Query: 232 GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLS 289
GK + + +F++ + ++ TQ G I + D+ + K +
Sbjct: 239 GKLGFFSRGQMVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIK 298
Query: 290 AQNTPTKIEKHEAEYVKKLR 309
Q K ++ + K+ +
Sbjct: 299 DQLLKNKYQEQIEKLTKEAK 318
>gi|192288942|ref|YP_001989547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris TIE-1]
gi|192282691|gb|ACE99071.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris TIE-1]
Length = 316
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 85/279 (30%), Gaps = 49/279 (17%)
Query: 42 IRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ +NG I D+ + + Q ++ + LI + + E I
Sbjct: 43 VLAKVNGAEIRQSDVDLAEQELGPSLAQLDPASRKENVLAFLIDMKIVAKAAEDKKIQ-- 100
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
DF L + + + DV+ + +
Sbjct: 101 -----------------DNADFKKRL-----------DFARNRLLMDDVLAAEGKAATTD 132
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
M+ ++ + +E R +L D ++K D +
Sbjct: 133 EAMKKVYDEAAKQISGEQEVHARHILVETEDEAKAVAEELKK------------GADFAE 180
Query: 219 LEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
L K SK S G + + + P+F ++P TQ G I + +KR
Sbjct: 181 LAKKKSKDPGASDGGDLGFFTKDQMVPEFSAAAFALEPGKISDPIKTQFGWHIIKVEEKR 240
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + T+ K +++YV KLR A I
Sbjct: 241 NRKPPSFDQVKAQIEQYVTR--KAQSDYVSKLRQAAKIE 277
>gi|86747655|ref|YP_484151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris HaA2]
gi|86570683|gb|ABD05240.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris HaA2]
Length = 306
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 90/306 (29%), Gaps = 49/306 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGE 71
+++ + + ++ + +NG I D++ L Q
Sbjct: 16 IISAAATGCLAFALLASPMARAQDANPVLAKVNGAEIRQSDVTLAEEELGPSLAQMDPAT 75
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
++ + LI + + E I D A L +D K D
Sbjct: 76 KKENVLSFLIDMKIVAKAAEDKKI-ADRAEFKKRLE-FA-RNRLLMDDLLGVEGKAATTD 132
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
K+ + A KQ +E R +L D
Sbjct: 133 EAMKK------------------------VYEDAAKQISGE---QEVHARHILVETEDEA 165
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
++K D +L K SK S G + + + P+F +
Sbjct: 166 KAIAEELKK------------GADFAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAVA 213
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
++P +Q G I + +KR+ + + T+ K +++YV +LR
Sbjct: 214 FALEPGKISDPVKSQFGWHIIKVEEKRNRKPPTFDQVKPQIEQYVTR--KAQSDYVTQLR 271
Query: 310 SNAIIH 315
A +
Sbjct: 272 QAAKVE 277
>gi|224417667|ref|ZP_03655673.1| hypothetical protein HcanM9_00172 [Helicobacter canadensis MIT
98-5491]
gi|253827018|ref|ZP_04869903.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141212|ref|ZP_07803405.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510424|gb|EES89083.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130243|gb|EFR47860.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 282
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 102/290 (35%), Gaps = 38/290 (13%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
++ + ++ + I +NG +T D+ K+Q+ + + +AV LI E L ++EI+
Sbjct: 18 AFGAPSLVNGIAFFVNGNPVTLLDV------YKVQQRDKVEQNLAVDILINEKLHEEEIK 71
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K I +N AR + E S++ G ++K+ + + + +
Sbjct: 72 KHKIVATELELNDEISAIARQNQTTPEQLESYIRTNGGNWENYKEEIKKRILKRKL--YQ 129
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--- 208
+ + ++ + + E+ I + + ++
Sbjct: 130 IISQESLKMVD-ENQLRSYYDTHKEEFSIPQSIDVTKFFSKEGAALETLIKSGGKDIPKG 188
Query: 209 ---RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQ 264
+ + + S IG + + F L K++NN T P+
Sbjct: 189 IGQENEVLQTTALNPQIVSAFTQGKIGSFTPIYP--IGEDFVTFLIKAKNNPTLAPFE-- 244
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ R +I L+ +S + E Y +KLRSNA +
Sbjct: 245 ---------NVR----DIVLQKIMSQKEDYLIYE-----YFEKLRSNAKV 276
>gi|229084142|ref|ZP_04216431.1| Foldase protein prsA 1 [Bacillus cereus Rock3-44]
gi|228699178|gb|EEL51874.1| Foldase protein prsA 1 [Bacillus cereus Rock3-44]
Length = 285
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 36/212 (16%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
D V+ F ++ + G + F + L +QG + FK+ + + ++
Sbjct: 65 KVDDKEVDKKFDEYKKQLG---DQFDAALKQQGFTEKTFKESVRAELAMTKAIEG----- 116
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E E+ K E +L ++ +K ++ + K
Sbjct: 117 -SITEKEL-------KENYKPEIKASHILVK-------DEATAKKVKEELGQ-----GKS 156
Query: 216 CNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAI 272
+L K S+ G Y + +F++ K ++ + P +Q G I +
Sbjct: 157 FEELAKQYSEDTGSKEKGGDLGYFGPGKMVKEFEDAAYKMKKDEVSEPVKSQFGYHIIKV 216
Query: 273 CDKRDLG---GEIALKAYLSAQNTPTKIEKHE 301
D ++ + KA + K++ E
Sbjct: 217 TDIKEPEKSFDDS--KADIKKDLVAKKMQDGE 246
>gi|206560348|ref|YP_002231112.1| putative exported isomerase [Burkholderia cenocepacia J2315]
gi|198036389|emb|CAR52285.1| putative exported isomerase [Burkholderia cenocepacia J2315]
Length = 260
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 93/284 (32%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDGPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRSMIEGFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L DN+ Q + + K A+
Sbjct: 114 AEVKARYDELVKGVGGNREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRVDD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDIAPPPFDQV-KAQIAQQLVQQKLQAFEEG----LRQQAKIQ 260
>gi|163737941|ref|ZP_02145357.1| preprotein translocase ATPase subunit [Phaeobacter gallaeciensis
BS107]
gi|161388557|gb|EDQ12910.1| preprotein translocase ATPase subunit [Phaeobacter gallaeciensis
BS107]
Length = 283
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 99/297 (33%), Gaps = 46/297 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQE 79
+ + + +S + ++ + T+NGE IT G I R L + +L + +
Sbjct: 11 LALTVALTLPISTAAEPHANTVVATVNGEEITIGHMIIARA---TLPQQYQQLPDDVLYD 67
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I++ L +Q K + V + LS E+ + L
Sbjct: 68 AILDQLIQQTSLKQELN---GEVPKYVA-------LSLENEARSLLAA------------ 105
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
DV++ + ++ +++ E+ +L ++ + +
Sbjct: 106 ------DVIEKVMENAASDEDLRTAYDEKYTDGTGGDEFNASHILVETEEDAADIRAELD 159
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
A +R R ++ + G+ + + + PQF+ +L + +
Sbjct: 160 AGADFATLARER-----------STGPSGPNGGELGWFSKGRMVPQFEEAVLVMGAGDVS 208
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+P TQ G I + D+R + + ++ + V L + A I
Sbjct: 209 DPVQTQFGWHVIKLNDRRTSAA--PTFDEVREELATQMRQEAVEDRVLSLTTAATIE 263
>gi|42521668|ref|NP_967048.1| hypothetical protein Bd0019 [Bdellovibrio bacteriovorus HD100]
gi|39574198|emb|CAE77702.1| ppiD [Bdellovibrio bacteriovorus HD100]
Length = 269
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 105/297 (35%), Gaps = 43/297 (14%)
Query: 23 IIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
++ I+ ++S ++A S+ + + + IT D +K+ +K Q IN ++ +++L+
Sbjct: 3 LVISILLLISATAFAQKSTDVVAQVGKKTITLEDFNKKYNEVKSQTINPPTKEQFLEDLV 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ QE EK + D + F ++ L ++ IG +Q
Sbjct: 63 RYEMGVQEAEKRNLQKDPIVQDRF-----------NQEMYKALLEKDIGQ-------RVQ 104
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQK 200
K + E+ A K E +L Q +K
Sbjct: 105 -------------KIQVSDAEMKAWYAK-----NPELRTSHILIEFKAGATPAQVAEAKK 146
Query: 201 RIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
R + E + + +L K S + G + L P + + ++
Sbjct: 147 RATEIYEEVKKSKRPFEELVKLYSDDALSKQVGGDIGWQSRVTLVPNYYEAVVNMKVGEI 206
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T TQ G I + +R E A K + A K ++ +Y ++++ + I
Sbjct: 207 TGLIETQFGFHVIKLTGRR--SFENANKRQIRAAVFDEKRKQVFNDYFERMKKSYPI 261
>gi|107028909|ref|YP_626004.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116689933|ref|YP_835556.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
gi|170733271|ref|YP_001765218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
gi|105898073|gb|ABF81031.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116648022|gb|ABK08663.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
gi|169816513|gb|ACA91096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
Length = 260
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 87/282 (30%), Gaps = 55/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDGPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V + L + +L VK + +
Sbjct: 84 DVKAQVA---------VAQQTVVLRS------MIESFLKKNQPTDAEVKARYDELVKGV- 127
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
REY + +L DN+ Q + + K A+ L
Sbjct: 128 ------------GGNREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDLA 163
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F +K Q T P TQ G I + D R
Sbjct: 164 KQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDAPVKTQFGWHIIRVDDIR 223
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
D+ + KA ++ Q K++ E LR A I
Sbjct: 224 DIAPPPFDQV-KAQIAQQLVQQKLQAFEEG----LRQQAKIQ 260
>gi|157736302|ref|YP_001488985.1| hypothetical protein Abu_0031 [Arcobacter butzleri RM4018]
gi|157698156|gb|ABV66316.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 274
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 79/198 (39%), Gaps = 11/198 (5%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
+M + + +N E IT DI + + + K+ + AV LI + L Q +++ I
Sbjct: 17 ASMVNGVAILVNEEPITLYDIERTMVVNKI------PKNEAVSYLIDKILYDQLVQEYNI 70
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
T D VN + + A + G+ F + + ++ + F+ I +V+ +
Sbjct: 71 TADIFEVNDYIEKLANSNGMDIYAFKAIIKQEYPDYSVFENEAKNTVIRQKLVQKLVKGQ 130
Query: 156 ---YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ +M++ K + K +T + + + +S + + I +E R L
Sbjct: 131 LAIATDEDMQLYYEKNRNKYLTAKTFDVTQ--YSSTSKEALMEVAKNPIIIPSEVQRTSL 188
Query: 213 PKDCNKLEKFASKIHDVS 230
+ ++ + + +
Sbjct: 189 KLNTEDIQAQLQYLLNGT 206
>gi|315635433|ref|ZP_07890699.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315480191|gb|EFU70858.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 274
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 79/198 (39%), Gaps = 11/198 (5%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
+M + + +N E IT DI + + + K+ + AV LI + L Q +++ I
Sbjct: 17 ASMVNGVAILVNEEPITLYDIERTMVVNKI------PKNEAVSYLIDKILYDQLVQEYNI 70
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
T D VN + + A + G+ F + + ++ + F+ I +V+ +
Sbjct: 71 TADIFEVNDYIEKLANSNGMDIYAFKAIVKQEYPDYSVFENEAKNTVIRQKLVQKLVKGQ 130
Query: 156 ---YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ +M++ K + K +T + + + +S + + I +E R L
Sbjct: 131 LAIATDEDMQLYYEKNRNKYLTAKTFDVTQ--YSSTSKEALMEVAKNPIIIPSEVQRTSL 188
Query: 213 PKDCNKLEKFASKIHDVS 230
+ ++ + + +
Sbjct: 189 KLNTEDIQAQLQYLLNGT 206
>gi|229056898|ref|ZP_04196294.1| Foldase protein prsA 2 [Bacillus cereus AH603]
gi|228720426|gb|EEL71999.1| Foldase protein prsA 2 [Bacillus cereus AH603]
Length = 285
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 101/302 (33%), Gaps = 44/302 (14%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+T+ + + I+ + + S+ I TT N IT D K+ LK + L ++
Sbjct: 5 STFIITALISILILSACGQKNDSATIATTTNST-ITKSDFEKQ---LKDRYGKDTLYEMV 60
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
Q++I + K + V+ + G E F + L+ + + FK
Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG---EQFKATLENNRLKDEEDFK 107
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +K E ++ K+ E +L N+
Sbjct: 108 NQIKFKLALNEAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SNE 147
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254
++ K + + + ASK + G Y + P+F+ K
Sbjct: 148 NEAKEIKKKLDTGTSFEELAKQESQDLASKDNG---GDLGYFGAGKMTPEFEKAAYKLKP 204
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312
+NP + G I + DK+DL +K + ++ + ++ A
Sbjct: 205 GQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQDELKKA 264
Query: 313 II 314
I
Sbjct: 265 DI 266
>gi|34498388|ref|NP_902603.1| signal peptide protein [Chromobacterium violaceum ATCC 12472]
gi|34104242|gb|AAQ60601.1| probable signal peptide protein [Chromobacterium violaceum ATCC
12472]
Length = 260
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 97/301 (32%), Gaps = 51/301 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK--IAVQ 78
+L+ +V + + A++ ++NG+ I+D + + +++ Q N +
Sbjct: 4 ILLQTALVAAFAGSAIAVAGP---SVNGQPISDARVDAVVKMMEAQGQNVNPQARDQIKD 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+L+ + +QE K G+ +A + A ++ L K Y
Sbjct: 61 QLVTAEVLRQEAVKKGLDKSP-------EFNAELQNMQAMALANRL---------IKDYE 104
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+++ +K +++ R +L +
Sbjct: 105 KA-------------NPLSEADLKAEYDKLAASVPETKQFHARHILVKSEAEAKSVIDAL 151
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKK-SQN 255
+K K +KL K S+ + G + F + K ++
Sbjct: 152 KK------------GKSFDKLAKEKSQDPGSKANGGDLGWQEAGTFVAPFSEAMSKLAKG 199
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P T+ G I + D R + + Q T + +YV +L++ A I
Sbjct: 200 EVTAKPVKTEYGWHVIKLDDVR-TQRNVPQLEEIRPQLTQRVMGARIEKYVAELKAKAQI 258
Query: 315 H 315
Sbjct: 259 Q 259
>gi|209515375|ref|ZP_03264241.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
gi|209504095|gb|EEA04085.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
Length = 295
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 98/315 (31%), Gaps = 53/315 (16%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67
+L L+ S S ++ T+N VI+ +++ + ++
Sbjct: 22 TLLGVAALIAISACTHKGTDGNSASATSSKEATDAALTVNDTVISQREMAMLVHQQPVRD 81
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ V L ++ L Q + G+ + +S +S L +
Sbjct: 82 EQPNSRQKIVDNLTMQILAAQAATQKGLDKSPEVQD--------QMDMSK---TSILAQA 130
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFS 186
Y+ DF + + ++ A K+K EY R ++
Sbjct: 131 ---------YIK-----------DFFASHKPTDAQLNAEYDKVKAAAAGNEYRARHIVV- 169
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-----IHDVSIGKAQYLLESD 241
K +A+ +L +D + AS + G + +
Sbjct: 170 -------------KSEDEAKAIIAKLNQDPKAFSELASADSLDPVSKAKGGDLGWFDPAR 216
Query: 242 LHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ P+F + ++K + + P +Q G I + D R + + ++
Sbjct: 217 MVPEFASAVQKLGKGQISQEPIKSQFGYHVIVVDDIRSKADSVPPFEQVKDSLAAHFEQE 276
Query: 300 HEAEYVKKLRSNAII 314
+ + +++ A I
Sbjct: 277 ELLKALSDMKAQAKI 291
>gi|134297991|ref|YP_001111487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
reducens MI-1]
gi|134050691|gb|ABO48662.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfotomaculum
reducens MI-1]
Length = 344
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 101/304 (33%), Gaps = 30/304 (9%)
Query: 40 SRIRTTINGEVITDGDISKRI-ALLKLQKING-------------ELEKIAVQELIVETL 85
+ + T+NG+ IT + K+ +++ K G +LE+ + ++I + L
Sbjct: 28 ANVVATVNGKDITRQQLDKQTNQMVERYKQQGFDLTTKENKAMKEQLEQSILDDMITKEL 87
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE EK + ++ + + + E++ L++ + + ++ L +
Sbjct: 88 LLQEAEKQKLIPAKEAIDKNMAEIKKGFP-NEEEYKKALEESKVTEAELREQLILDESSR 146
Query: 146 DVVKNDFMLKYGNLEMEIPA----NKQKMKNITVREYLIRTVLFSI----PDNKLQNQGF 197
+ + + EI NK + T ++ +LF+I P + +
Sbjct: 147 KLYEKVTADVKKPTDEEITKFYNENKGREPIGTPERLEVKHMLFAINSDQPGVPKRGEKE 206
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK----AQYLLESDLHPQFQNLLKKS 253
+ K A + +D + + S + +
Sbjct: 207 ALEAAKLALAEVTQKGRDFGVVAREKSDDLGTRENGGSYTIDRGANTTDPAFEKAAENLK 266
Query: 254 QNNTTN-PYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
T P + G I + + +K ++AQ + +++ LR
Sbjct: 267 PGEITKEPVKSAYGFHIIKLEKVTPASTKALTEVKDSIAAQLEGEAKQAKFTQFIDNLRK 326
Query: 311 NAII 314
NA I
Sbjct: 327 NAKI 330
>gi|206968099|ref|ZP_03229055.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH1134]
gi|229177678|ref|ZP_04305055.1| Foldase protein prsA 2 [Bacillus cereus 172560W]
gi|206737019|gb|EDZ54166.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH1134]
gi|228605868|gb|EEK63312.1| Foldase protein prsA 2 [Bacillus cereus 172560W]
Length = 285
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACEQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENNGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|324325142|gb|ADY20402.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 288
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 101/302 (33%), Gaps = 49/302 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L ++ + + + A S ++ T+ G+ IT D ++ + K
Sbjct: 3 KAMLALAATSVIALSACGTGASSDKVVTSKAGD-ITKEDFYTQM--------KQQYGKQV 53
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 54 LNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIKN 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ Q +E +++K+ E +L ++
Sbjct: 106 GVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DEA 145
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKS 253
+K ++ + K +L K S+ G + + +F+ K
Sbjct: 146 TAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKLK 200
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKLR 309
++ + P +Q G I + D ++ KA + + K + E +K+++
Sbjct: 201 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 260
Query: 310 SN 311
Sbjct: 261 KA 262
>gi|312878320|ref|ZP_07738236.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311794903|gb|EFR11316.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 343
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 15/255 (5%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L+ ++ LI ETL QE +K G+ VN + +N + E F +L K
Sbjct: 87 LKNKVIELLITETLCLQEAKKRGMKLTFAEEQEVNNYINNI-KNDKYAREMFYEYLKKIK 145
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ FK+ Q + ++ + N+ ++ KQ +N +++ V +
Sbjct: 146 SNEELFKK----QLLRERLIDKLYKEITKNVTLKEQEMKQYYENNKNEYRMVKVVDIFLR 201
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQF- 246
Q + +K + +K++ + G Y + + +F
Sbjct: 202 VENEQQKAEKEKLANQLMAKIKNGGSIFDLAQKYSEITTKNGQKGVIDYFRKGEKESEFG 261
Query: 247 ----QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ + + + T G I D++ E K + K +K
Sbjct: 262 SVFEEKVFNLKKGEISEIIQTLNGYHIAQIIDEKFAPYESV-KGEIEQSLKKQKKDKVFQ 320
Query: 303 EYVKKLRSNAIIHYY 317
EY+ +LR ++I +
Sbjct: 321 EYLNELRKKSVIKEF 335
>gi|326390841|ref|ZP_08212393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
ethanolicus JW 200]
gi|325993100|gb|EGD51540.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermoanaerobacter
ethanolicus JW 200]
Length = 301
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/324 (15%), Positives = 91/324 (28%), Gaps = 54/324 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
+ L++F + + S + + T+NGE IT+ + K +K Q +
Sbjct: 1 MKRKIALLLFFVFIVFLTVSCSTKKDVVATVNGENITNAEYKKAFDQVKAQIESSPQYTK 60
Query: 72 ---------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+++ + LI + L QE K+ IT + + +
Sbjct: 61 DIWDQDYQGKKFLDVVKENVLDSLIAQKLLVQEALKNNITVTDKEIADEYQKEKEVNK-- 118
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
I K YL I ++ + K E K N
Sbjct: 119 -----------DITKEDVKNYLLINKLFDEYTK-------DVKVTEEELKKYYEDNKEQF 160
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKA 234
E + K + ++ + +RL +D L K S G
Sbjct: 161 EVV-----------KASHILVADEKTAEDIYNRLMKGEDFATLAKEYSIDTATKDQGGDL 209
Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ +F Q + + + P T G I A S
Sbjct: 210 GEFPHGVMVSEFDQVVFSLKKGEISKPVKTDYGYHIIKSEGVAIKPFNEVKDAIESYLLN 269
Query: 294 PTKIEKHEAEYVKKLRSNAIIHYY 317
K + + +Y L A I +
Sbjct: 270 DKKNQVIKEKY-DALEKAAKIQKF 292
>gi|229171802|ref|ZP_04299374.1| Foldase protein prsA 1 [Bacillus cereus MM3]
gi|228611699|gb|EEK68949.1| Foldase protein prsA 1 [Bacillus cereus MM3]
Length = 289
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 104/302 (34%), Gaps = 48/302 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L ++ + + + + S +I T+ G+ IT + +++ N + K
Sbjct: 3 KAMLALAATSVIALSACGTGSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQT 54
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ +++E + + D V+ F + + G + F + L +QG+ + K
Sbjct: 55 LNNMVMEKVLIK-----NYKVDDKEVDKKFDEMKKQVG---DQFDTLLKQQGLKEETVKN 106
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ Q +E +++K+ E +L ++
Sbjct: 107 GVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DEA 146
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKS 253
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 147 TAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKLK 201
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKLR 309
++ + P +Q G I + D ++ KA + + K + E +K+++
Sbjct: 202 KDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIK 261
Query: 310 SN 311
Sbjct: 262 KA 263
>gi|118476746|ref|YP_893897.1| peptidylprolyl isomerase [Bacillus thuringiensis str. Al Hakam]
gi|225863116|ref|YP_002748494.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB102]
gi|229090207|ref|ZP_04221455.1| Foldase protein prsA 2 [Bacillus cereus Rock3-42]
gi|229183467|ref|ZP_04310692.1| Foldase protein prsA 2 [Bacillus cereus BGSC 6E1]
gi|118415971|gb|ABK84390.1| protein export protein [Bacillus thuringiensis str. Al Hakam]
gi|225789473|gb|ACO29690.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB102]
gi|228600051|gb|EEK57646.1| Foldase protein prsA 2 [Bacillus cereus BGSC 6E1]
gi|228693143|gb|EEL46856.1| Foldase protein prsA 2 [Bacillus cereus Rock3-42]
Length = 285
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 97/299 (32%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V + G + F++ L+ + D FK+ +
Sbjct: 64 VITKKYK----------VSDDDVEKEVQKVKNQYG---DQFTAVLENNRLKDEADFKKQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E E+ A+ + E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKEVKAHYK-------PEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLKVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK++L +K + +I + ++K A I
Sbjct: 208 SNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKANI 266
>gi|182414803|ref|YP_001819869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutus terrae
PB90-1]
gi|177842017|gb|ACB76269.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutus terrae
PB90-1]
Length = 328
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 107/300 (35%), Gaps = 23/300 (7%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL--KLQKINGE----------LEKIAVQELIVETL 85
++ I + +VIT D+ + IA L +LQ+ L+ +Q LI L
Sbjct: 32 FANGIAAIVEDKVITVDDVRREIAPLIAQLQREARNEREFNEKLEQLQDDVIQSLIDRVL 91
Query: 86 KKQEIEKSGIT-FDSNTVNYFFVQH-ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+E K + ++ + F ++L +G +++ + I
Sbjct: 92 IVKEFRKDEKKHIPDSFIDNRLADILSEQFDNDRSKFLAYLHSRGTTLREYRREVEEDII 151
Query: 144 WP--DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + + +E N+ K + +R + FS + + +
Sbjct: 152 YQYMRQEQRKSQSIVSPVRIETFYNENKDRFYQEDGVHLRLIQFSRANGETDEDL---RA 208
Query: 202 IKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
+ +R++ + L + ++ G + SDL P+F + L + ++
Sbjct: 209 KANLVMARIKAGEKFEDLAREYSQDSRRAKGGDWGWQKRSDLKPEFSEPLFSLKKGEVSD 268
Query: 260 PYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
P + +G + D++ G + ++ + + ++++LR N + +Y
Sbjct: 269 PIILPEGCFILFAEDRKYAGIQPIDEVRDEIERVLVQQMSRNSQEHWLERLRRNGYVKHY 328
>gi|303256912|ref|ZP_07342926.1| probable parvulin-type peptidyl-prolyl cis-trans isomerase
[Burkholderiales bacterium 1_1_47]
gi|302860403|gb|EFL83480.1| probable parvulin-type peptidyl-prolyl cis-trans isomerase
[Burkholderiales bacterium 1_1_47]
Length = 261
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 87/282 (30%), Gaps = 54/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING----ELEKIAVQELIVETLKKQEIEKSGITFD 98
T+NG+ I + L +L G E + + L+ L +QE K I+ D
Sbjct: 24 IATVNGKPIPKS--LQDEWLAQLVANGGKDTPEARRQITENLVANALVEQEAAKRKISDD 81
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ A L F L + + +A + +K +
Sbjct: 82 PK------VKFA----LDYAKF-RILQEA-----LLRDEMAKHPVSEKEIKARY------ 119
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E E A K EY + +L ++ + E +L +
Sbjct: 120 -EEEKAALGNK-------EYEVSHILVK------------DQKTAENIEKKLAAGGNFAA 159
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICD 274
L K S + G + + F + +K + + P T+ G I + D
Sbjct: 160 LAKEFSVDTGAKENGGDLGWNRPAVFVKPFADAVKNMKKGEISKAPVKTEFGWHIIKVND 219
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+++ + Q K + ++ +L I Y
Sbjct: 220 VKEVP--FPTYDSVKDQIREGLELKKQQNFLNELMKTNKIEY 259
>gi|255321569|ref|ZP_05362727.1| trimethylamiNe-N-oxide reductase 1 [Campylobacter showae RM3277]
gi|255301425|gb|EET80684.1| trimethylamiNe-N-oxide reductase 1 [Campylobacter showae RM3277]
Length = 270
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 92/280 (32%), Gaps = 40/280 (14%)
Query: 44 TTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
T+NG ITD D++ + + L+++ + +K + E I L E +KSG+
Sbjct: 23 ATVNGTAITDKDVAFTLAAMPGVTLEQLPKDTQKKVIDETINRKLLLDEAKKSGLDKSD- 81
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ + L++ K LA+ + N +K E
Sbjct: 82 ------------------EYKAALEE-------LKNNLALDLWMKRIFDN---IKVSEGE 113
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ NK K + + + +L + K N + +E + +
Sbjct: 114 ISDFYNKNKAEFAVPAQVRAKHIL--VATEKDANDIIAALKGLKGDELVKKFEELAKSKS 171
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKRDL 278
+ G+ + +S + F + + T P + G I D +
Sbjct: 172 TDQGSA--ANGGELGWFGQSQMVKPFADAAFALKKGEVTQKPVKSNFGYHVILKEDSKAA 229
Query: 279 G--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G G +K + K + +LRS A + Y
Sbjct: 230 GTVGLNEVKPQIEGNIKMEKFRNDIRKRGDELRSKAKVEY 269
>gi|296501860|ref|YP_003663560.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
gi|296322912|gb|ADH05840.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
Length = 285
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 IITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|238026987|ref|YP_002911218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia glumae
BGR1]
gi|237876181|gb|ACR28514.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia glumae
BGR1]
Length = 259
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 94/283 (33%), Gaps = 58/283 (20%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I + +A L Q +L K QEL+ + QE K G+ +
Sbjct: 25 VAVVNGTPIPKARVDAMVAQLVQQGQPDSEQLRKKVSQELVNREILMQEAIKEGV-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + DF+ K +
Sbjct: 84 DVKQQVA------------------------------IAQQAVVLRAMIEDFVKKNQPSD 113
Query: 161 MEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+I A + K+++ EY + +L DN+ + + K A+ L
Sbjct: 114 ADIKARYDELTKSVSGNEYHLHHILV---DNEQLAKELIAKIKAGAK---------FEDL 161
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDK 275
K SK + G + P+F N + T P TQ G I + D
Sbjct: 162 AKQYSKDPGSAKNGGDLDWADPKSFVPEFANAATHLQKGQMTDTPVKTQFGWHIIRVDDV 221
Query: 276 RDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + + KA ++ Q K++ E + LR+ A I
Sbjct: 222 RPVAPPPLDQV-KAQIAQQIVQQKLQAFEEK----LRAQAKIQ 259
>gi|224825281|ref|ZP_03698386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum
2002]
gi|224602202|gb|EEG08380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum
2002]
Length = 258
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 92/303 (30%), Gaps = 57/303 (18%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQ 78
+L+ ++S A +NG I+ I + +++ Q +L+ A
Sbjct: 5 LLLSTLTAAVLSTAVLAAPP----VVNGTAISQSRIDAVVRMMEAQGQQSSPDLQAAARD 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+LI + +Q K G+ A + +S L K
Sbjct: 61 QLITAEILRQAAVKKGLDKSP-------EYRAELENMQTMALASRLIKD----------- 102
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQG 196
F + ++ A K+K+ + Y R +L
Sbjct: 103 -------------FQRSNPVSDAQLRAEYDKIKSQFPEKKSYHARHILVPTEAE------ 143
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-S 253
A LR K ++L K S + G + S+ F + K +
Sbjct: 144 ------AKAVIDALRKGKAFDQLAKEKSIDPGSKNNGGDLGWSEASNFVAPFSEAMTKLA 197
Query: 254 QNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T+ P T+ G I + D R + + Q + +++ L++ A
Sbjct: 198 KGQVTSEPVKTEFGWHVIKLDDVRTEAAPPVEQ--IRPQLEQRIMSGRIEKFISDLKAKA 255
Query: 313 IIH 315
I
Sbjct: 256 SIQ 258
>gi|224418500|ref|ZP_03656506.1| cell binding factor 2 precursor major antigen PEB4A [Helicobacter
canadensis MIT 98-5491]
gi|253827813|ref|ZP_04870698.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142030|ref|ZP_07804223.1| cell binding factor [Helicobacter canadensis MIT 98-5491]
gi|253511219|gb|EES89878.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131061|gb|EFR48678.1| cell binding factor [Helicobacter canadensis MIT 98-5491]
Length = 271
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 106/301 (35%), Gaps = 44/301 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQE 79
I+ V S + +NG+ IT+ DI+ + + ++ E + V +
Sbjct: 4 ILLSSVVAFSLLQGVSFAETFAKVNGDEITEKDIAALMRAMPGVSFAQLPQEAKDQVVNQ 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+ L + +K G+ +F L+ K+ LA
Sbjct: 64 AVERKLLIAQAKKEGVEKSK-------------------EFKEALES-------VKEDLA 97
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
++ + +K + E+E N+ K K + ++ +L ++ +
Sbjct: 98 LEVWMRQEMG---KVKVSSSEIEKFYNQNKTKFVQPETAKVKHILV-------SSEADAK 147
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
I D +++ + + K SK + G+ ++ + + P+F + K ++
Sbjct: 148 NIIADLKKAGKNVASKFEEFAKAKSKDGSAQNGGELGWIAKGQVVPEFADAAFKLNKGQY 207
Query: 258 TN-PYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P TQ G I + DKR + TK +++ + + LRS A +
Sbjct: 208 TQTPVKTQFGYHVIYVDDKRPTTTLALKDVSGQIEQNLKLTKFQENVRKEGQDLRSKAKV 267
Query: 315 H 315
Sbjct: 268 E 268
>gi|149199507|ref|ZP_01876542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lentisphaera
araneosa HTCC2155]
gi|149137442|gb|EDM25860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lentisphaera
araneosa HTCC2155]
Length = 308
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 118/315 (37%), Gaps = 34/315 (10%)
Query: 25 FCIVPIVSYKSWA---MSSRIRTTINGEVITDGDIS-----KRIALLKLQKING------ 70
F ++ ++ S+A I +NG +IT DI + + L ++
Sbjct: 4 FALITLLCLSSFAGRVYKVSIMAKVNGHIITSYDIQELSYREEMRLRQIFNGPELPSRIV 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGI-TFDSNTVNYFFVQ-HARNTGLSAEDFSSFLDKQG 128
+L + A+ LI E L + S+ + + AR G + F L ++
Sbjct: 64 DLRRRALDILIEEQLILDHFNSNDAYQVPSSLLEERIEKSIARRFGSDRDKFYDMLHQKD 123
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
+ +++ + I ++++ +F+ K +I + K + L +
Sbjct: 124 MTVEEYREEIERGIIL-ELMRMEFIRKKIVVTPHDIALYFAENKAEFATPSQMHIKLIIL 182
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+K + V K ++ L+ K ++L + + G +L +D+ P F
Sbjct: 183 SKDKSKYDERVTKLKQE-----LKDGKSFDELMPQSDSQFN---GDLGFLKMTDIRPDFL 234
Query: 248 NLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEA 302
L K T + + ++ + + R +I+ + + ++ + + +++
Sbjct: 235 EALKDKKAGEYITIEETTQML-FVQLSEVRKSAVPPLEDISDQ--IKSKLSSDQEKQYRE 291
Query: 303 EYVKKLRSNAIIHYY 317
E++ L+ A I Y
Sbjct: 292 EFIGDLKRGAKIEKY 306
>gi|303326078|ref|ZP_07356521.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
sp. 3_1_syn3]
gi|302863994|gb|EFL86925.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
sp. 3_1_syn3]
Length = 640
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/395 (10%), Positives = 112/395 (28%), Gaps = 94/395 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M + ++ F + ++++F + S+ ++ + +NG+ I +
Sbjct: 1 MLDYIRSNAQSFGVKVAFGVIILVFVFWGVGSFNDRNSAN-VVAIVNGDPILVQQFEQAY 59
Query: 59 -RIALLKLQKINGELEKI---------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
L+ G + +++LI +TL QE ++G++ + +
Sbjct: 60 RNAEESILRNNPGVTREQLKEQHLGRQVLRDLIQQTLLAQEAARAGVSVTPLELRQAVGR 119
Query: 109 HA----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---------------- 148
E ++ L Q I +++ ++ Q + +
Sbjct: 120 IKSFQDAQGRFDPEAYTRVLAAQRISPAQYEKDMSDQLLREKIFTLVTAPVWVDPDEAQN 179
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVRE------YLIRTVLFSIPD------------- 189
+ +F+ + ++ K + V + Y F+IP
Sbjct: 180 RYNFLREKRVVDYLFIPAKNFSGEVKVTDQDVTAYYDAHKKDFAIPPKVDVAYVSVTPGG 239
Query: 190 --NKLQNQGFVQKRIKDAEESR-------------------------------------- 209
++ +A +SR
Sbjct: 240 LVKPESISEADAQKWYEANKSRFEEPAQVKAAHILVPLAENAPADAEKKAREEVAKIQAE 299
Query: 210 LRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267
L+ KD + + + G+ ++ F++ + P + G+
Sbjct: 300 LKSGKDFAAVADAHNGSNAAGPGGELGWITPGKTVKPFEDAAFALKAGQVSEPVRSPFGL 359
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
I + DK+ G + A + + + +
Sbjct: 360 HIIKVEDKKPGGLKTFKDAAREVRQAMAQEQGADK 394
>gi|332530714|ref|ZP_08406644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis
ATCC 19624]
gi|332039835|gb|EGI76231.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis
ATCC 19624]
Length = 266
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 88/284 (30%), Gaps = 48/284 (16%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
S A + + +NG+ I + +L+ Q E+ + Q +I L QE +
Sbjct: 26 SVAQAQNL-AVVNGKPIPTARVDALARQVLRGQPPTPEIMEELKQAVIDRELLAQEARRQ 84
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ ++ A+ + + ++V F
Sbjct: 85 GLAATPEY--RAQIEFAQES----------------------------LLIRELV-ARFQ 113
Query: 154 LKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + Q+ + +EY R +L ++K + +
Sbjct: 114 QTNPVTDADFQEGYQRFVAANGGKEYHARHILVPTEAEAQALLAQLKK-GAKFDALAKQH 172
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYI 270
KD + G + P+F L+ + T+ P TQ G +
Sbjct: 173 SKDPGSAAR---------GGDLDWAPAQGYVPEFAAALQALGKGQTSEAPVQTQFGWHLL 223
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ D RD+ + + Q ++ E+ K LR+ A I
Sbjct: 224 QVEDVRDIQ--LPSLNDVKPQLAQEIGQRKFEEFQKDLRAKAKI 265
>gi|30261164|ref|NP_843541.1| peptidylprolyl isomerase [Bacillus anthracis str. Ames]
gi|47526319|ref|YP_017668.1| peptidylprolyl isomerase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183995|ref|YP_027247.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne]
gi|65318433|ref|ZP_00391392.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus
anthracis str. A2012]
gi|165871813|ref|ZP_02216456.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0488]
gi|167635351|ref|ZP_02393665.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0442]
gi|167640186|ref|ZP_02398452.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0193]
gi|170688111|ref|ZP_02879323.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0465]
gi|170707650|ref|ZP_02898102.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0389]
gi|177654152|ref|ZP_02936125.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0174]
gi|190566666|ref|ZP_03019583.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis Tsiankovskii-I]
gi|196036478|ref|ZP_03103874.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus W]
gi|196037489|ref|ZP_03104800.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus NVH0597-99]
gi|218902237|ref|YP_002450071.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH820]
gi|227816105|ref|YP_002816114.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. CDC 684]
gi|228926187|ref|ZP_04089262.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228932442|ref|ZP_04095323.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229120660|ref|ZP_04249903.1| Foldase protein prsA 1 [Bacillus cereus 95/8201]
gi|229600239|ref|YP_002865593.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0248]
gi|254682780|ref|ZP_05146641.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066]
gi|254725568|ref|ZP_05187350.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055]
gi|254734195|ref|ZP_05191908.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North
America USA6153]
gi|254740159|ref|ZP_05197851.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B]
gi|254753500|ref|ZP_05205536.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum]
gi|254758597|ref|ZP_05210624.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94]
gi|46396834|sp|Q81U45|PRSA1_BACAN RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|30254778|gb|AAP25027.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. Ames]
gi|47501467|gb|AAT30143.1| peptidylprolyl isomerase PrsA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177922|gb|AAT53298.1| protein export protein prsA [Bacillus anthracis str. Sterne]
gi|164712390|gb|EDR17924.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0488]
gi|167511787|gb|EDR87167.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0193]
gi|167529179|gb|EDR91932.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0442]
gi|170127425|gb|EDS96300.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0389]
gi|170668006|gb|EDT18757.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0465]
gi|172080859|gb|EDT65939.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0174]
gi|190562218|gb|EDV16186.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis Tsiankovskii-I]
gi|195990952|gb|EDX54924.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus W]
gi|196031731|gb|EDX70327.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus NVH0597-99]
gi|218537167|gb|ACK89565.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH820]
gi|227006959|gb|ACP16702.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. CDC 684]
gi|228662665|gb|EEL18262.1| Foldase protein prsA 1 [Bacillus cereus 95/8201]
gi|228827132|gb|EEM72885.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228833440|gb|EEM79002.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229264647|gb|ACQ46284.1| peptidylprolyl isomerase PrsA1 [Bacillus anthracis str. A0248]
Length = 287
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKSQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|196044409|ref|ZP_03111645.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB108]
gi|196025048|gb|EDX63719.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus 03BB108]
Length = 285
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 97/299 (32%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V + G + F++ L+ + D FK+ +
Sbjct: 64 VITKKYK----------VSDDDVEKEVQKVRNQYG---DQFTAVLENNRLKDEADFKKQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E E+ A+ + E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKEVKAHYK-------PEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLKVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK++L +K + +I + ++K A I
Sbjct: 208 SNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKANI 266
>gi|330998838|ref|ZP_08322565.1| putative peptidylprolyl isomerase PrsA1 [Parasutterella
excrementihominis YIT 11859]
gi|329576052|gb|EGG57571.1| putative peptidylprolyl isomerase PrsA1 [Parasutterella
excrementihominis YIT 11859]
Length = 261
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 86/280 (30%), Gaps = 50/280 (17%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
T+NG+ I + +A L E + + L+ L +QE K I+ D
Sbjct: 24 IATVNGKPIPKSLQDEWVAQLVANGGKDTPEARRQITENLVANALVEQEAAKRKISDDPK 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V+ A L F L + + +A + +K + E
Sbjct: 84 ------VKFA----LDYAKF-RILQEA-----LLRDEMAKHPVSEKEIKARY-------E 120
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E A K EY + +L ++ + E +L + L
Sbjct: 121 EEKAALGNK-------EYEVSHILVK------------DQKTAENIEKKLAAGGNFAALA 161
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKR 276
K S + G + + F + +K + + P T+ G I + D +
Sbjct: 162 KEFSVDTGAKENGGDLGWNRPAVFVKPFADAVKNMKKGEISKAPVKTEFGWHIIKVNDVK 221
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ + Q K + ++ +L I Y
Sbjct: 222 EVP--FPTYDSVKDQIREGLELKKQQNFLNELMKTNKIEY 259
>gi|326790698|ref|YP_004308519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
lentocellum DSM 5427]
gi|326541462|gb|ADZ83321.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
lentocellum DSM 5427]
Length = 352
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 94/314 (29%), Gaps = 33/314 (10%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEKIA----------VQ 78
+ + + T+NG I GD+ K + + Q GE E++ +
Sbjct: 40 TAGTDSEAAKTVLATVNGVEILQGDLDKVYNSMVAEYQSYYGESEEMLTFLKQQKPGLLT 99
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
LI L KQ+ ++ IT V + G E + G +K +
Sbjct: 100 GLINRELLKQKAKELNITCTDEEVEKIYSDLVSTYG--EEQVQEVIKANGFTTETYKAQI 157
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQN-- 194
V + + + ++ ++ T + +L + D +
Sbjct: 158 KEDEALSKVQEKMQEGEIKVTDEDVKKYYDENIDSFTTGAGANMEHILVKVADTDTDDYK 217
Query: 195 ---QGFVQKRIKDA------EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
V+ K+ +E + + D + + +G QY +
Sbjct: 218 KKCDEAVKTIEKEITDGTTFDELKTKYTADGIDTNMYVVE----DLGFVQYEQPNYDTAF 273
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAE 303
+ + + + G +I + +D + KA ++ + +
Sbjct: 274 LAGAKEVKEGEISKAVKSSFGYHFIKVEGIKDKEVKPLEDVKAQITTTLENEQKNAYYNA 333
Query: 304 YVKKLRSNAIIHYY 317
+++ A I +
Sbjct: 334 KLEEWTKAAKIEKF 347
>gi|283850615|ref|ZP_06367902.1| hypothetical protein DFW101DRAFT_0472 [Desulfovibrio sp. FW1012B]
gi|283573858|gb|EFC21831.1| hypothetical protein DFW101DRAFT_0472 [Desulfovibrio sp. FW1012B]
Length = 520
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 92/295 (31%), Gaps = 29/295 (9%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK---------IAVQELIVET 84
+ A + +NG I D+ R L +L + ++IV
Sbjct: 29 QDAAREPGVVAVVNGAPIRLPDLEARHGLGRLGAPEAGNPAVEQLRAEYGAVLADMIVAR 88
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARN--TGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L +QE+ + G+ V Q + TG S + F L ++ I +++ L +
Sbjct: 89 LVRQELARLGLAVTPAEVEAAEAQVRADYATGDSGDAFERMLLEERIDLGRWREVLGDRL 148
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ E A Y + + + R
Sbjct: 149 ALAKFSREVLRQNARVDVSEAAA------------YYKEHID---AFTRPARVRLAEVRG 193
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPY 261
++AE + L + + + D + + E +L ++ +K +
Sbjct: 194 REAEAVQAALTAWRKSGQSASLESLDGITVREATVPEKNLAEPWRQAVKGLKPGEASGLL 253
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ + + KAY + A+ K+EK A ++ + + A I
Sbjct: 254 GADTETWFLVVLSREPATVFDPAKAYARVEAELGARKLEKTFAAWLAEALAGARI 308
>gi|261417353|ref|YP_003251036.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373809|gb|ACX76554.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327407|gb|ADL26608.1| PPIC-type PPIASE domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 335
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 50/317 (15%), Positives = 96/317 (30%), Gaps = 17/317 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---- 71
L + + I S + S + I+ G I +L Q+ G+
Sbjct: 5 LISRGAAAVLLTAGIASAQLMNSKSLDVIRVEKTGISAGKIDSLATMLGQQQAPGQKLTD 64
Query: 72 -----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L V L+ + L K E +K GI V+ + S + F L K
Sbjct: 65 EMMTQLRYAVVDNLVGQELIKLEAKKMGIKVAPAKVDSLTNLFKKQFP-SEDAFQKELKK 123
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLF 185
FK+ + Q +++ E ++ A Q K + + + + +F
Sbjct: 124 SNTTMKQFKEKIEDQLKSEQILEKKVPYPSAPTEKDLEAFWQLNKSKVAINDTISGARIF 183
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKD-CNKLEKFASKIHDV--SIGKAQYLLESDL 242
K + K + +++R K +L S + + G +
Sbjct: 184 ISTKGKNAQEISDAKDMLKGLAAQVRSKKATFAQLAAMYSDDKEAKKTGGIMNKFVAKSK 243
Query: 243 HPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEK 299
F + K + + + GV + +K D E Y+ + +
Sbjct: 244 SAAFAKAVGKIKVGDISEVITENDGVSIFMLTEKNDGKFESYKHQIDYILRVQAEQERQA 303
Query: 300 HEAEYVKKLRSNAIIHY 316
Y+ L + Y
Sbjct: 304 KLKAYLDDLGKTYKVQY 320
>gi|161524535|ref|YP_001579547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans ATCC 17616]
gi|189350709|ref|YP_001946337.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia multivorans
ATCC 17616]
gi|160341964|gb|ABX15050.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans ATCC 17616]
gi|189334731|dbj|BAG43801.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia multivorans
ATCC 17616]
Length = 260
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 95/283 (33%), Gaps = 57/283 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + +F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRAMIENFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A + REY + +L D++ Q + + K A+
Sbjct: 114 AEVKARYDDLVKTAGGNREYHLHHILV---DSEQQAKELIAKIKGGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T+ P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDEPVKTQFGWHIIRVDD 221
Query: 275 KRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ +KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFAQVKAQIAQQLVQQKLQTFEE----TLRQQAKIQ 260
>gi|218961587|ref|YP_001741362.1| putative Parvulin-like peptidyl-prolyl isomerase [Candidatus
Cloacamonas acidaminovorans]
gi|167730244|emb|CAO81156.1| putative Parvulin-like peptidyl-prolyl isomerase [Candidatus
Cloacamonas acidaminovorans]
Length = 281
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 97/280 (34%), Gaps = 23/280 (8%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+I + I++ ++ + A + L + LE A++ LI L + +SGI
Sbjct: 2 QIIAKVFEFEISEQELERECAKVSLAEREKCLE-GALKRLIDRCLLLYKAMESGIKISDT 60
Query: 101 TVNYFFVQHARNTGLSAED----FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ L ED +S+ L++ + ++ L + + + + F
Sbjct: 61 EYENAIWEL-----LDEEDPLKLWSTSLEQ--LTPQEMEKLLKQRLMINKYINSIFPQNI 113
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+I + K ++ +R I ++ + + ++ ++ + C
Sbjct: 114 PITNAKIKEFYDEQKEFFLKPEQVRCSHILIRNDNEEAKAKAEQIRREIHNA-DDFTYFC 172
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+K++ + G + + P+ + + + + P+++ G + +
Sbjct: 173 ---QKYSDCPSNNVCGDLGWFPRGKMIPEIEEVAFSLTVGEISQPFLSPYGYHILMKTGQ 229
Query: 276 RDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ +I Y Q + + ++ +LR
Sbjct: 230 SEKEYIPFEDIKDSLYARLQQIEREYKLL--RHLAELRKQ 267
>gi|210620911|ref|ZP_03292328.1| hypothetical protein CLOHIR_00271 [Clostridium hiranonis DSM 13275]
gi|210155123|gb|EEA86129.1| hypothetical protein CLOHIR_00271 [Clostridium hiranonis DSM 13275]
Length = 260
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 96/277 (34%), Gaps = 29/277 (10%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M ++ TING I++ D+ + + Q+ + + L+ + L QE+ +
Sbjct: 1 MERKVLATINGREISNIDLDNAVKSMHPQQQMRFQSEEGKKRLLED-LVNQEL--FYLEA 57
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
N V+ E+F + +++ + N KQ+ Q + + Y
Sbjct: 58 KDNKVDE------------TEEFKALMEQ--VTINMLKQHALNQLFMAAMPTEEEAKAYY 103
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K R +L +N+ + + + AEE +
Sbjct: 104 DEHQDEFKVDEMAKA--------RHILIK-AENEDEFAAAEARAKEIAEEIKAGEKTFEQ 154
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
++ ++ G + + P+F+ + ++ + P T G I + ++
Sbjct: 155 AAIDYSDCPSNMQGGDLGLFGKGQMVPEFEEAVFSMNEGELSEPVKTSFGYHLIKVEERH 214
Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G +K + + K K + V +LR
Sbjct: 215 KAGVSKFEEVKDEILGKLAQLKQLKAYEDKVAELREK 251
>gi|126668935|ref|ZP_01739876.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17]
gi|126626598|gb|EAZ97254.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter sp. ELB17]
Length = 624
Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/350 (14%), Positives = 106/350 (30%), Gaps = 87/350 (24%)
Query: 43 RTTINGEVITD------GDISKRIALLKLQKINGEL------EKIAVQELIVETLKKQEI 90
T+NG+ IT+ + + L ++++ + L +Q LI E + Q+
Sbjct: 43 VATVNGQDITEREFLRVVQLESQNRLSRMERPDPSLLDEDQIRVDVLQALIEEQVLAQDA 102
Query: 91 EKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQ---------YL 138
++ G+ ++ Q + + + + F + + G+G F+ +
Sbjct: 103 DRQGLALSDADIDALITQMPQFQVDGQFNRDQFVTTVRNVGMGVGEFRDAMRKQTVVNQI 162
Query: 139 AIQSIWPDVVKNDFMLKYGNLEME-------------IPANKQKMKNITVREYLIRTVLF 185
+ VV ++ + + ++ + + Y LF
Sbjct: 163 RAGIVASGVVTSNSITRLMKIQNQTRDFRLLNISASAVADQVNVSAGDIQAFYDSNPNLF 222
Query: 186 SIPD-----------------------------NKLQNQGFVQKRI---------KDAEE 207
P+ + ++R DA+
Sbjct: 223 QQPEQVDVSYVVLSLNALADAIVISDEELLTYYQSREADLAREERRAAHILVEDTADADA 282
Query: 208 SRLRLPKDCNKLEKFASKIHDVSI--------GKAQYLLESDLHPQF-QNLLKKSQNNTT 258
R+ + E FA+ ++SI G + P F + L +
Sbjct: 283 VVERIQQRLADGEDFAALAQELSIDTVSGEQGGDLGFAGRGVYDPAFDEALFSLEPGTVS 342
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKK 307
+P T GV I + D R ++ A ++AQ E+ Y +
Sbjct: 343 DPVRTSFGVHLIKLNDIRR--SDVPALADVAAQLRDDLSREQAREAYAQA 390
>gi|307729669|ref|YP_003906893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
gi|307584204|gb|ADN57602.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
Length = 259
Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 86/279 (30%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ + +L+ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKARADALIEQLVHQGQQNSSQLQMAVREELVNREVLMQEALRRGLQ-NRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ + V +
Sbjct: 84 DIKAQIA---------VAQQTVVLRAL------IEDFVKKNTPSDAEVTARYNALI---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A +L
Sbjct: 125 ----------KDAGGKEYHLHHILV---DNEQQAKDLIAKIKGGA---------SFEELA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTTN-PYVTQKGVEYIAICDKR 276
K SK + G + P+F N + ++ P TQ G I + D R
Sbjct: 163 KQFSKDPGSGKNGGDLDWSDPKAYVPEFANAATHLQKGQMSDEPVHTQFGWHIIRVDDVR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + AQ ++ + + LR NA I
Sbjct: 223 NIT--PPPLEQVRAQIVQQIQQEKLQAFEEGLRKNAKIQ 259
>gi|229108609|ref|ZP_04238221.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
gi|228674864|gb|EEL30096.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
Length = 286
Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 100/299 (33%), Gaps = 50/299 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +++T GDI+K +++ G K +
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKIVTSKAGDITKEEFYNQMKTQAG---KQVLN 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + + V+ F + + G + F + L +QGI + K +
Sbjct: 55 NMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIKTGV 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q +E +++K E +L ++
Sbjct: 107 RAQLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K ++ + K +L K S+ G Y + +F++ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKLKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P +Q G I + D ++ +K + K + +K+++
Sbjct: 202 EVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFMNDLMMKEIKKA 260
>gi|312796410|ref|YP_004029332.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI
454]
gi|312168185|emb|CBW75188.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia
rhizoxinica HKI 454]
Length = 260
Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 91/301 (30%), Gaps = 60/301 (19%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA--VQELIV 82
+ V+ ++A + +NG I + L Q + +EL+
Sbjct: 10 AALAGCVAAPAFAQN---IAVVNGTPIPKARADALVKELTRQGQQDSPQLQVMVREELVN 66
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYLAIQ 141
L +E + GI + V L Q + +L
Sbjct: 67 RELLMEEALRRGI-ANRPDVKAQIA----------------LADQSVVIRALIDDFLKNN 109
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
D +K + + + E + +L +PD + + +
Sbjct: 110 KPSDDEIKARY-------------EQLIKQAGGGNELHLHHIL--VPDEQQAKELIAK-- 152
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQNN--T 257
++ L K SK + G + P+F + K + T
Sbjct: 153 --------IKAGASFEDLAKQHSKDPGSAKNGGDLDWANPQSYVPEFADAAGKLKKGEVT 204
Query: 258 TNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ P TQ G I + D R + + KA ++ Q T K+++ A +L NA I
Sbjct: 205 STPVHTQFGWHIIRLDDSRAIQPPPLDQV-KAQVAQQLTQEKLQQFNA----ELHKNAKI 259
Query: 315 H 315
Sbjct: 260 Q 260
>gi|300024688|ref|YP_003757299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526509|gb|ADJ24978.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium
denitrificans ATCC 51888]
Length = 311
Score = 65.4 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 105/310 (33%), Gaps = 51/310 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLK--LQKIN 69
+K + + F + + + A + ++ TI+G+ IT+GD++ + + + +
Sbjct: 1 MKRIFPTAFTVAFAVALLGAPGIQAFAQDKVVATIDGKPITEGDLAVAESEIGSDMGTMP 60
Query: 70 GELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
G ++ ++ E LI L + EK+ + + F + L
Sbjct: 61 GPQKRTSLLEFLIDNQLFAEAGEKAKLDQGPD-------------------FETRLAY-- 99
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
K+ + + V+K + + + Q E R +L
Sbjct: 100 -----LKRRALRELYFEKVIKG----SVSDADARKIYDDQVKLLKPEEEVSARHILVETE 150
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
+ + + + K D +L K SK G Y + PQF
Sbjct: 151 EQAKELKAKLDK------------GADFAQLAKENSKDPGSKDDGGNLGYFGHGQMVPQF 198
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ ++ K + + P TQ G + + D R + + + + + +
Sbjct: 199 EEVVFKLKKGEVSAPVKTQFGWHLVKLEDSRTKQ--PPAFEIVKDRIAQSLLLQKAQKTA 256
Query: 306 KKLRSNAIIH 315
+LR+NA I
Sbjct: 257 TELRANAKIE 266
>gi|209883242|ref|YP_002287099.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
gi|209871438|gb|ACI91234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
Length = 301
Score = 65.4 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 93/311 (29%), Gaps = 57/311 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKING 70
++L + +++ A +++ +NG I D++ L Q
Sbjct: 15 RVLGLLSGAACCLALTLMAAPLRADDNQVIAKVNGAEIRQSDVTAAEKDLGPSLAQLDPA 74
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ V+ LI + + E I R S +
Sbjct: 75 SRQDSIVRFLIDLKIVSKAAEDKKIADS--------ADFKRRLTFSRDRLL--------- 117
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ N+ + ++ + + +E R +L D
Sbjct: 118 -------------MDTLLDNEGKAALTDEALKKVYEEASKQISGEQEVHARHILVETEDE 164
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL 249
++K D +L K SK S G Y + + P+F
Sbjct: 165 AKAIVAELKK------------GADFAELAKKKSKDPGASDGGDLGYFTKDQMVPEFSTA 212
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK----IEKHEAEY 304
++P +Q G I + DKR A KA Q P I K +A+Y
Sbjct: 213 AFALETGKISDPVKSQFGWHIIKVEDKR------ARKAPPFEQVKPQLEAFVIRKAQADY 266
Query: 305 VKKLRSNAIIH 315
V KLRS A +
Sbjct: 267 VAKLRSEAKVE 277
>gi|114331519|ref|YP_747741.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
eutropha C91]
gi|114308533|gb|ABI59776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
eutropha C91]
Length = 264
Score = 65.4 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 97/309 (31%), Gaps = 54/309 (17%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGEL 72
LT + + + + + + A +NG I D+ + A + Q + E+
Sbjct: 2 RLTKFLCVPLAVLGFVCTTPLSAQGGGTVAKVNGIAIPQSRLDLVIKAATAQGQPDSAEM 61
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ LI E + QE K G+ + + V L +QGI
Sbjct: 62 RNALRENLITEEVLTQEAIKKGLDRNPDVVTQI-----------------DLARQGILIR 104
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNK 191
++ DFM + E+ + +K+ +EY R +L
Sbjct: 105 AYQ--------------ADFMRNNPVSDDELRKEYESVKSQMGDKEYKARHILVETEQEA 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ V K +L + + K + G+ + + F + L
Sbjct: 151 ---KDLVASLKKGGVFEKLAGERSIDTGSK-------SNGGELGWSSAAVYVKPFSDALT 200
Query: 252 KSQNN--TTNPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
K + T+ P T G I + D R + K + + K V+
Sbjct: 201 KLKKGETTSQPVQTPFGWHVIRLDDVRTAVPPSFDEV-KQNMQQRVLQRKFAAV----VE 255
Query: 307 KLRSNAIIH 315
LR NA +
Sbjct: 256 SLRKNAKVE 264
>gi|229160113|ref|ZP_04288114.1| Foldase protein prsA 1 [Bacillus cereus R309803]
gi|228623324|gb|EEK80149.1| Foldase protein prsA 1 [Bacillus cereus R309803]
Length = 287
Score = 65.4 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 99/303 (32%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSA--QNTPTKIEKHEAEYVKKL 308
++ + P +Q G I + D + + + + Q E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFDQSKDEIKKEIVQKKAQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|229160220|ref|ZP_04288219.1| Foldase protein prsA 2 [Bacillus cereus R309803]
gi|228623181|gb|EEK80008.1| Foldase protein prsA 2 [Bacillus cereus R309803]
Length = 285
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSTTVATAIDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L+ + D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELNKVKNQYG---DQFKTVLENNRLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + VK E ++ K+ + +L ++
Sbjct: 111 KFKLAMNEAVKK------SVTEKDV-------KDHYKPDIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFASGTMTPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK+DL +K + +I + ++ A
Sbjct: 206 QISNPVKSSNGYHIIKLTDKKDLKPYNEVKDSIRKNLEEERIADPTFSQKLLQDELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|228913840|ref|ZP_04077465.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845779|gb|EEM90805.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 285
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 93/301 (30%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKEVQKAKSQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ +K E ++ K+ E +L ++
Sbjct: 111 KFKLSMNKAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKIG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
++P + G I + K+DL +K + + + ++ A
Sbjct: 206 QISDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKKLLQSELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|284122311|ref|ZP_06386843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Poribacteria sp. WGA-A3]
gi|283829362|gb|EFC33756.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Poribacteria sp. WGA-A3]
Length = 186
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 9/181 (4%)
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + V + +I A +Q+ + + IR +L KL
Sbjct: 2 EMMVRRVRDMETRRGLFVSPEDIRAYYKEQQPLFTSPHAHHIRQILLLP---KLGENMET 58
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNN 256
K + S+L + +L + S V G ++ +++L P ++ L K S
Sbjct: 59 LKARAEILMSQLDEGRTFEQLAELFSDGSESVMGGDLGFVTKNELLPPLRDALHKISPGE 118
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T T+ G+ + + + R E +K + ++ K++K ++ L+ A I
Sbjct: 119 VTPLIETEIGIHILRLEESRPGVTEPFEKVKDAIESRLYQEKLQKSHDAWMSSLKDKAYI 178
Query: 315 H 315
Sbjct: 179 E 179
>gi|196037443|ref|ZP_03104754.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus NVH0597-99]
gi|196031685|gb|EDX70281.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus NVH0597-99]
Length = 285
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 97/299 (32%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V + G + F++ L+ + D FK+ +
Sbjct: 64 VITKKYK----------VSDDDVEKEVQKVKNQYG---DQFTAVLENNRLKDEADFKKQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ A+ + E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDVKAHYK-------PEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLKVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK++L +K + +I + ++K A I
Sbjct: 208 SNPVKSPNGYHIIKLTDKKELKPYDEVKDSIRKNLEEERIADPTFSHKLLQKELKKANI 266
>gi|254247979|ref|ZP_04941300.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
gi|124872755|gb|EAY64471.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
Length = 260
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 87/282 (30%), Gaps = 55/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDGPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V + L + +L VK + +
Sbjct: 84 DVKAQVA---------VAQQTVVLRS------MIESFLKKNQPTDAEVKTRYDELVKGV- 127
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
REY + +L DN+ Q + + K A+ L
Sbjct: 128 ------------GGNREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDLA 163
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F +K Q T P TQ G I + D R
Sbjct: 164 KQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDAPVKTQFGWHIIRVDDIR 223
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
D+ + KA ++ Q K++ E LR A I
Sbjct: 224 DIAPPPFDQV-KAQIAQQLVQQKLQAFEEG----LRQQAKIQ 260
>gi|242309396|ref|ZP_04808551.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523967|gb|EEQ63833.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 275
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
++I ++ ++ + +M + I +NG +T ++ K+Q+ + + IAV LI
Sbjct: 1 MLIGILLSSFAFGAPSMVNGIAFFVNGNPVTLLEV------YKVQQRDKVNQNIAVDILI 54
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
E L ++EI+K I +N + AR +A S++ G ++K+
Sbjct: 55 NEKLHEEEIKKHKIVATELEINDEINRIARQNQATAAQVESYIRSNGGNWENYKE 109
>gi|229095647|ref|ZP_04226628.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29]
gi|229114599|ref|ZP_04244013.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3]
gi|228668664|gb|EEL24092.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3]
gi|228687779|gb|EEL41676.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29]
Length = 287
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 103/300 (34%), Gaps = 51/300 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +V+T GDI+K ++++ G +Q
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKVVTSKAGDITKEDFYNEMKQKAGS---QVLQ 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + D V+ + + G + F + L +QG+ + FK L
Sbjct: 55 GMVMEKVLIK-----NYKVDDKEVDKKLDETKKQVG---DQFDTLLKQQGMKEETFKNML 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q +E +++K E +L ++
Sbjct: 107 RAQLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K ++ + K +L K S+ G + + +F++ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFEHGKMVKEFEDAAYKLKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + D ++ KA + + K++ +K+++
Sbjct: 202 EVSEPVKTQFGYHIIKVTDIKEPEKSFEQSKADIKKELIAKKMQDGAFMNDLMMKEIKKA 261
>gi|228984336|ref|ZP_04144517.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229154831|ref|ZP_04282946.1| Foldase protein prsA 2 [Bacillus cereus ATCC 4342]
gi|228628779|gb|EEK85491.1| Foldase protein prsA 2 [Bacillus cereus ATCC 4342]
gi|228775453|gb|EEM23838.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 285
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 94/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSEDDVDKEVQKAKSQYG---DQFKNILKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFHSGAMTPEFETAAYKLKIGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
++P + G I + K+DL +K + +I + ++K A I
Sbjct: 208 SDPVQSPNGYHIIKLTGKKDLQPYNEVKDSIRKNLEAERIADPTFSHKLLQKELKKANI 266
>gi|228919876|ref|ZP_04083232.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839777|gb|EEM85062.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 286
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 99/302 (32%), Gaps = 48/302 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G Y + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLR 309
++ + P +Q G I + D ++ +K + K + +K+++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFMNDLMMKEIK 258
Query: 310 SN 311
Sbjct: 259 KA 260
>gi|229195349|ref|ZP_04322120.1| Foldase protein prsA 1 [Bacillus cereus m1293]
gi|228588123|gb|EEK46170.1| Foldase protein prsA 1 [Bacillus cereus m1293]
Length = 287
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 102/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKFDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F+ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKSQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|30019198|ref|NP_830829.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579]
gi|218233989|ref|YP_002365810.1| peptidylprolyl isomerase [Bacillus cereus B4264]
gi|229042892|ref|ZP_04190626.1| Foldase protein prsA 1 [Bacillus cereus AH676]
gi|229126454|ref|ZP_04255469.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
gi|229143755|ref|ZP_04272176.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|229149355|ref|ZP_04277591.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|296501758|ref|YP_003663458.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
gi|46396827|sp|Q81GY5|PRSA1_BACCR RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|29894741|gb|AAP08030.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579]
gi|218161946|gb|ACK61938.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus B4264]
gi|228633997|gb|EEK90590.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|228639708|gb|EEK96117.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|228657034|gb|EEL12857.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
gi|228726439|gb|EEL77662.1| Foldase protein prsA 1 [Bacillus cereus AH676]
gi|296322810|gb|ADH05738.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
Length = 286
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 99/302 (32%), Gaps = 48/302 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G Y + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLR 309
++ + P +Q G I + D ++ +K + K + +K+++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKAQDAAFMNDLMMKEIK 258
Query: 310 SN 311
Sbjct: 259 KA 260
>gi|15640000|ref|NP_219453.1| basic membrane protein (tpn39b) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189026239|ref|YP_001934011.1| basic membrane protein [Treponema pallidum subsp. pallidum SS14]
gi|231640|sp|P29725|BMP_TREPA RecName: Full=Basic membrane protein; Flags: Precursor
gi|155055|gb|AAA27475.1| basic membrane protein precursor [Treponema pallidum]
gi|3323343|gb|AAC65966.1| basic membrane protein (tpn39b) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018814|gb|ACD71432.1| basic membrane protein [Treponema pallidum subsp. pallidum SS14]
gi|291060373|gb|ADD73108.1| basic membrane protein [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 361
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/347 (15%), Positives = 110/347 (31%), Gaps = 55/347 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKL---QKIN 69
+ Y V + C+ + + + + +N E +T G I RI+ ++ +K++
Sbjct: 1 MGRYIVPALLCVAGM-GFAHAQSALQPIAEVNLFRREPVTLGQIKARISAIEKEMGKKLS 59
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--------------VQHA----R 111
+ + LI E L Q EK+GI VN +F + A
Sbjct: 60 TAERRQFMDSLIDEKLFAQAAEKAGIQVTDAEVNQYFNGMLSQQIGRAVTEAEFANYVKE 119
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND----FMLKYGNLEMEIPANK 167
+S + F + G+ +K++L Q V F G + +I +
Sbjct: 120 KQNISLDQFMK--QQNGMTMAEYKKFLKTQVSTQRYVAQKKADEFRNLKGPEDSQIRSYY 177
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ K R ++ L S+P K + ++ + K ++ A+
Sbjct: 178 ELNKQAFFRPDTVKLFLISVPKGSGP-AAAKAKAQEFVKKLKSSGVKATADIKSKANGAQ 236
Query: 228 DVSIGKAQY-----LLESDLH---PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD-- 277
Y + + L + ++ T + + K +
Sbjct: 237 AGYSAGEIYLGKTAVTATQLGLTMEALLEIFGMGVGAVSDVNETANDYQCFIVLKKEEAK 296
Query: 278 -------LGGEIALKAY------LSAQNTPTKIEKHEAEYVKKLRSN 311
+ + + Y L++Q +E E +LR +
Sbjct: 297 ILTLSDLVEPDKTVSLYEFIKNLLTSQIQQKALEDAIREVSAELRKS 343
>gi|317008847|gb|ADU79427.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori India7]
Length = 299
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTEKLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKV 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ + K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYDANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + N T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|296879875|ref|ZP_06903848.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
gi|296429164|gb|EFH15038.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
Length = 321
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 92/295 (31%), Gaps = 28/295 (9%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQ------------------KINGELEKIAVQELIV 82
T+ G I+ + K IAL K K + + + + +LI
Sbjct: 16 ETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDIWDKEVEKGVKYKDKFKDLILDQLIT 75
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ + +K + V F + G E + L K GI D +
Sbjct: 76 TEVIYSQAKKDNLLPKKEDVEKSFKELKDAMG-KDEKYKEQLKKLGIDDEFLRDQQEKDL 134
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFSIPDNK----LQNQGF 197
+ N F K + E+ K+ E +L D+ +
Sbjct: 135 AMQNYQSN-FTKKTKISDEEMKKYYDTHKDEFKKDEVEASHILLKTVDDNNKPLSAKEKA 193
Query: 198 VQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
K+ + ++ +D K +K++ GK + + +F++ +
Sbjct: 194 EAKKKAEEALKEVKSGEDFAKVAKKYSQDASASDGGKLGFFSRGQMVAEFEDAAFSMKKG 253
Query: 256 NTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
++ TQ G I + D+ + K + Q K ++ + K+ +
Sbjct: 254 EVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIKDQLLKNKYQEQIEKLTKEAK 308
>gi|170747170|ref|YP_001753430.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
radiotolerans JCM 2831]
gi|170653692|gb|ACB22747.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
radiotolerans JCM 2831]
Length = 311
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 87/277 (31%), Gaps = 44/277 (15%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ ++NG+ IT GD++ A + G E L+ + + G
Sbjct: 60 VVASVNGKPITQGDLAI-AADDPALSLPGVDEAQKKNLLVDYMVDL----RVGAQAAE-- 112
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
A G + E F L F+ L + K + +
Sbjct: 113 --------AAKIGDTPE-FKRKLAY-------FRDKLLLDDYLEQEAKRAVTPEAEHAIY 156
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ K + E R +L N+ +K +R++ +D K+
Sbjct: 157 DQTVKLMKPEE----EVHARHILV-------DNEAEAKKI-----AARIKGGEDFAKVAA 200
Query: 222 FASKIHD--VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
ASK G + + + P F N ++P TQ G I + +KR
Sbjct: 201 EASKDPGSKAEGGDLGWFTKERMVPDFANAAFAMKAGQVSDPIKTQFGWHVIKVEEKRTK 260
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
L Q I K + + + KLRS A I
Sbjct: 261 P--QPTFDELKEQIDQHLIRKAQQDMILKLRSEAKIE 295
>gi|218232569|ref|YP_002365948.1| peptidylprolyl isomerase [Bacillus cereus B4264]
gi|218160526|gb|ACK60518.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus B4264]
Length = 285
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACEQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E +I K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDI-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|320106396|ref|YP_004181986.1| SurA domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319924917|gb|ADV81992.1| SurA domain protein [Terriglobus saanensis SP1PR4]
Length = 240
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 22/203 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISKRIALLKLQ- 66
+ +L+ F + + + RI +NG++I D+ + + KLQ
Sbjct: 8 RVFAVALLLCFICRSMPAQTPAKPADPRGESVDRIIAIVNGQIILQSDLDEEVRFAKLQP 67
Query: 67 ---KINGELEKIAVQELIVETLKKQEIEKSGIT-FDSNTVNYFFVQH-------ARNTGL 115
L + A+ LI TL Q+ + G ++ A
Sbjct: 68 YRLGAGKTLREQAMSRLIDRTLILQQQQGMGQAPITDAELDAAITDLRKDLPACAHAACE 127
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
+ E + FL G ++ I+ ++ F + +I + K +
Sbjct: 128 TDEGWIKFLAGVGFTPEEVRERWRIRLEVLRFIEQRFRAGIRISDAQIE---EFYKTTML 184
Query: 176 REYLIRTVLFSIPDNKLQNQGFV 198
+Y + V + V
Sbjct: 185 PQYAQQKVQPPPLETISARIEQV 207
>gi|206976548|ref|ZP_03237454.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus H3081.97]
gi|206745231|gb|EDZ56632.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus H3081.97]
Length = 288
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 97/303 (32%), Gaps = 48/303 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + SS T IT D ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSSDKVVTSKAGDITKEDFYTQM--------KQQYGKQ 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 53 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIK 104
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 105 NGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F+ K
Sbjct: 145 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKL 199
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKSQDGEFMNDLMMKEI 259
Query: 309 RSN 311
+
Sbjct: 260 KKA 262
>gi|15644804|ref|NP_206974.1| cell binding factor 2 [Helicobacter pylori 26695]
gi|2499779|sp|P56112|Y175_HELPY RecName: Full=Uncharacterized protein HP_0175; Flags: Precursor
gi|2313264|gb|AAD07245.1| cell binding factor 2 [Helicobacter pylori 26695]
Length = 299
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTEKLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKV 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|228913728|ref|ZP_04077354.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845920|gb|EEM90945.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 287
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TSVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|170692424|ref|ZP_02883587.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
graminis C4D1M]
gi|170142854|gb|EDT11019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
graminis C4D1M]
Length = 259
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 81/279 (29%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L + Q+ +L+ +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKARADALIDQLVHQGQQNTPQLQMAVREELVNREILMQEALRRGL-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ + V +
Sbjct: 84 DIKAQIA---------VAQQTVVLRAL------IEDFVKKNTPSDAEVTARYNALI---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A L
Sbjct: 125 ----------KDAGGKEYHLHHILV---DNEQQAKDLIAKIKGGA---------SFEDLA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F + + + P TQ G I + D R
Sbjct: 163 KQYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMSETPVHTQFGWHIIRVDDVR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + Q ++ + + LR NA I
Sbjct: 223 SIT--PPPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259
>gi|42780220|ref|NP_977467.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987]
gi|42736139|gb|AAS40075.1| protein export protein prsA [Bacillus cereus ATCC 10987]
Length = 287
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 99/287 (34%), Gaps = 48/287 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +++T GDI+K ++++ G +Q
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKIVTSKAGDITKEEFYNEMKQKGGS---QVLQ 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + D V+ + + + G + F + L +QG+ + K +
Sbjct: 55 SMVMEKVLIK-----NYKVDEKEVDKKYDEMKKQVG---DQFDTLLKQQGLKEETLKNGV 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +E +++K E +L ++
Sbjct: 107 RAELA-------------QDKAIEKTITDKELKENYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K ++ + K +L K S+ G + + +F++ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKLKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE 301
+ P +Q G I + D ++ KA + + K + +
Sbjct: 202 EVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKKQDTQ 248
>gi|237749474|ref|ZP_04579954.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter
formigenes OXCC13]
gi|229380836|gb|EEO30927.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter
formigenes OXCC13]
Length = 256
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 99/300 (33%), Gaps = 52/300 (17%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELI 81
+ +S+ S+A ++ +NG+ I + + + Q EL +LI
Sbjct: 1 MVLSTLSLSFVSFAAFAQNVAVVNGKAIPSSYSDEAVKEVVKQGGKDTPELRNNIKTQLI 60
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
V + QE EK + ++ V AR + I +
Sbjct: 61 VGEVLLQEAEKQNL-ASTDAVKKQME-MARRS---------------ILIDTL------- 96
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFVQ 199
+N+++ K + E+ A ++ + EY ++ +L +K ++
Sbjct: 97 -------RNNYVTKNPVSDNEVKAEYDRLVKMQKGQTEYHVKHILVK---DKATADSIIK 146
Query: 200 KRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNN 256
+ K+ P KL + S K G + DL F + ++ +
Sbjct: 147 QVSKN--------PASFEKLAQEKSLDKASAARGGDMGWATAGDLVKPFSDAMVSLKKGQ 198
Query: 257 TT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P T+ G I + D + + I + + + + EY L A I
Sbjct: 199 VSKTPVQTEFGYHIIKVVDSQKVK--IPTYEQIKPKLKASMQYRKWQEYEMGLMKEAKIQ 256
>gi|328949546|ref|YP_004366881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus
hydrothermalis DSM 14884]
gi|328449870|gb|AEB10771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinithermus
hydrothermalis DSM 14884]
Length = 611
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/316 (12%), Positives = 92/316 (29%), Gaps = 30/316 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
+ I + R +NGE + + ++++ L +N + A++
Sbjct: 16 AVAFALGTIFLFTPQGNPQQEGRTVLWVNGEPVRELELARLQQTTPLFALN---PEGALK 72
Query: 79 ELIVE-------TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIG 130
LI LK + + + ++ V Q GL +S FL + G
Sbjct: 73 PLIDTYFLEQVILLKALAQDAARVRVSNSKVRQQVDQIRERFGLETRQDYSDFLQQIGYT 132
Query: 131 DNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
D + + Q I + + ++ E K T R ++
Sbjct: 133 DATLRDEIRTQLRINKRLEQIREQVELSEEEARFYFTLHKDTYRTEDRIKARQIVV---- 188
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL------H 243
+ + + +++ + + K A++ +A +
Sbjct: 189 ----DDEALARELRERTLAGEEFAALAREYSKVAAEQGGAVGAEAGSDEPQPVTRIVFPK 244
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKH 300
P + T+ + + G E A + + +
Sbjct: 245 PVADAAFALKEGGLTDVIEAGGRYHLVQVEAFLPGGDASFEEVADAVRADALAAKQRQAV 304
Query: 301 EAEYVKKLRSNAIIHY 316
+Y++ +R+ A + +
Sbjct: 305 -EDYLEAVRARATVKF 319
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 14/149 (9%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
Y F IP + Q + + + AE R RL + LE A ++ + +
Sbjct: 426 YNENPQRFVIPASA-QVKAVTFQDKESAETFRARLIEG-EALEDLAQELGGEVV-DYGTV 482
Query: 238 LESDLHPQFQNLL--------KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK---A 286
L P L+ + + + + G +A+ + + +
Sbjct: 483 NPRQLPPVLDQLIFFSEATFAESPEGKVSELIELEDGTFQVALVNDQKPEVLRPFEEVQD 542
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A K + E++ +LR NA I
Sbjct: 543 EARALALAQKRNRIANEWLDELRENAQIE 571
>gi|317013595|gb|ADU81031.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
Gambia94/24]
Length = 299
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 96/284 (33%), Gaps = 35/284 (12%)
Query: 38 MSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S+ + T++G IT D I +R K+ + ++ +++ I L + E +
Sbjct: 40 ASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAK--- 96
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A + E F + + K+ ++ + +
Sbjct: 97 ---------------AEKLNQTPE-FKAMM-------EAVKKQALVEFWAKKQAEEVKKV 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + N T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|30249389|ref|NP_841459.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
europaea ATCC 19718]
gi|30138752|emb|CAD85329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
europaea ATCC 19718]
Length = 264
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 93/306 (30%), Gaps = 48/306 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGEL 72
L+ + + + + + A S +NG I D+ + A + Q + E+
Sbjct: 2 RLSKFLCVPLTVLGLVCVAPLNAQSGGTVAKVNGVAIPQSRLDLVVKAATAQGQPDSAEV 61
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ LI E + QE K G+ V L +QGI
Sbjct: 62 RNALRENLITEEILAQEAIKKGLDRSPEVVTQI-----------------DLARQGILIR 104
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNK 191
++ DFM + E+ + +K +EY R +L
Sbjct: 105 AYQ--------------ADFMRNNPVSDSELRKEYESVKAQMGDKEYKARHILVETEQEA 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LL 250
++K D E+ + G+ + + F + L+
Sbjct: 151 KDLVAALKKGSA----------FDKLAGERSIDTGSKSNGGELGWSSAAVYVKPFADALI 200
Query: 251 KKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + TT P + G I + D R + +++ A V+ LR
Sbjct: 201 RLKKGETTSQPVQSPFGWHVIRLDDVRTAV--PPSFEEVKQNMQQRVLQRKFAAVVESLR 258
Query: 310 SNAIIH 315
NA +
Sbjct: 259 KNAKVE 264
>gi|121604733|ref|YP_982062.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
gi|120593702|gb|ABM37141.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
Length = 263
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/308 (15%), Positives = 104/308 (33%), Gaps = 52/308 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGD-ISKRIALLKLQKINGE 71
++ L+ + +++ + ++ +NG+ + T D +++++A + + E
Sbjct: 1 MIMKKQFLLATAMASLLALGAQGAIAQNVAIVNGKAVPKTRLDALAQQVAKAG-RPVTPE 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+E +E+I + QE EK GI + L
Sbjct: 60 MEGQLREEVIAREVFMQEAEKQGIAASDD--------FKAQMEL---------------- 95
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSIPDN 190
A Q++ + + K + ++ A K + +EY R +L
Sbjct: 96 -------ARQTLMIRELFASYQKKNPVTDADLKAEYDKFAAASGGKEYKARHILVEKESE 148
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QN 248
++K K + +K + G + S P+F +
Sbjct: 149 ATAIIASLKK-----------GGKFEDIAKKQSKDPGSGAKGGDLDWANPSSYVPEFTEA 197
Query: 249 LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
LLK ++ T P +Q G I + D R ++ + Q ++ A + ++
Sbjct: 198 LLKLNKGQMTDTPVKSQFGYHVIRVDDIR--SAKLPAFEEVKPQIAQQMQQQKLAAFQEE 255
Query: 308 LRSNAIIH 315
LR A +
Sbjct: 256 LRKKAKVE 263
>gi|222094778|ref|YP_002528838.1| peptidylprolyl isomerase [Bacillus cereus Q1]
gi|221238836|gb|ACM11546.1| protein export protein prsa [Bacillus cereus Q1]
Length = 286
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 90/265 (33%), Gaps = 44/265 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ N K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSPTGKQ 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L + G+ + K
Sbjct: 53 TLNNMVLEKVLIK-----NYKVEDKDVDKKYDEMKKQIG---DQFDTLLKQPGVTEKTLK 104
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V E +++K+ E +L ++
Sbjct: 105 NSVRAQLAQEKAV-------------EQAITDKEVKDYYKPEIKASHILVK-------DE 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 145 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKL 199
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRD 277
++ + P +Q G I + D ++
Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKE 224
>gi|189423768|ref|YP_001950945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi
SZ]
gi|189420027|gb|ACD94425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter lovleyi
SZ]
Length = 305
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/317 (12%), Positives = 93/317 (29%), Gaps = 50/317 (15%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67
+L + L+ S + + +++ T+NG IT D + + L
Sbjct: 5 TLLSVTVTVIATAGLVACQGGGSSSSSTSSKDAKVIATVNGAKITSEDFDREVKALPEYI 64
Query: 68 INGELEKIAVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+E+I L Q+ K G+ + + +
Sbjct: 65 RAMADTPQGKKEMIDTLVMRELILQQAAKDGVD-KGKEIEEKLAELKKR----------- 112
Query: 124 LDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
I + + K+ + + K + E++ + K +
Sbjct: 113 -----IIVDTYLKKKVEAE------------SKISDDELKKFYEQNLDKFKAGEQIRASH 155
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+L ++ + Q +++ K A L K + G + + ++
Sbjct: 156 ILVK---SEQEAQSILEQLKKGANFEELAKTKSADS--------SAAKGGDLGWFGKGNM 204
Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIE 298
P F+ + + + G I + KR G + + + P K +
Sbjct: 205 VPAFEKAAFGLKEGQLSGIVKSDFGYHIIKLTGKRAAGTRPLDEVKEQ-IKGAIMPQKQQ 263
Query: 299 KHEAEYVKKLRSNAIIH 315
+ + + L+ A I
Sbjct: 264 QVFMKLKEDLKKGAKIE 280
>gi|225180894|ref|ZP_03734342.1| SurA domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225168375|gb|EEG77178.1| SurA domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 241
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 70/222 (31%), Gaps = 29/222 (13%)
Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-SKRI 60
T KVF +L F L++ V + C ++ T+NG IT D ++ +
Sbjct: 6 TKKVFFTLLVFSVLIS--LVALGGCSEQATDGNEETDGNKAIATVNGVGITYDDFSAQLL 63
Query: 61 ALLKLQKING----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+L ++ G LE AV+ LI E L QE E I + ++ Q
Sbjct: 64 EFEQLAQMQGMSLEDPETVTILENQAVEVLINEQLLLQEAENKDIQISQSEIDEQIDQMK 123
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP------ 164
F L QG+ + + V + + E EI
Sbjct: 124 SGFE-DDGQFEEALAAQGVEIEELADLIREDMLI-QAVFAETVPNISVSEDEITDEEINE 181
Query: 165 --------ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
A Q M + E V F I + +
Sbjct: 182 VYDQQQQMAEAQGMDLPPLEELEAEVVAFIIQQMQEAEEKQA 223
>gi|317495597|ref|ZP_07953965.1| ppic-type ppiase domain-containing protein [Gemella moribillum
M424]
gi|316914411|gb|EFV35889.1| ppic-type ppiase domain-containing protein [Gemella moribillum
M424]
Length = 308
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 99/267 (37%), Gaps = 28/267 (10%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+T+ DI + I +L K A +I + L ++K D + +
Sbjct: 37 VTEKDIVESIGASQLSKT-------ATSMMIQKVL----LDKYKGKIDEKAIEEQLQKAQ 85
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
G E F L +QG + +K L +++ ++ + L+ NK
Sbjct: 86 TQYGGK-EKFEQLLKQQGFTLDKYKDGLKVKAAQTLLINDYTGTNEDKLKENYEKNK--- 141
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFAS--KI 226
+Y + +L S+ N N + K AEE +++ +D L K S
Sbjct: 142 -----HQYHLAHILISVKSNSNPNGLSDEDAKKKAEELHKKIKDGEDFATLAKENSNDTA 196
Query: 227 HDVSIGKAQYLLESD--LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ + G + + D +F+ +++ ++ T G I + D++D +
Sbjct: 197 NASNGGDLGWSSKEDNSFVKEFKEAAYALTKDKVSDVVKTSFGYHIIKVLDEKDATFDE- 255
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+KA L+ + ++K K L+
Sbjct: 256 MKATLAEKAAEEAVKKDSTVVSKALKK 282
>gi|229101746|ref|ZP_04232463.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28]
gi|228681694|gb|EEL35854.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28]
Length = 287
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 102/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QG+ + FK
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKRFDETKKQVG---DQFDTLLKQQGMKEETFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ +E +++K+ + +L ++
Sbjct: 104 NTIRASLA-------------QEKAIEKTITDKELKDNYKPQIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFEHGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P TQ G I + D ++ KA + + K++ +K++
Sbjct: 199 KKDEVSEPVKTQFGYHIIKVTDIKEPEKSFEQSKADIKKELIAKKMQDGAFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|228944771|ref|ZP_04107134.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228814799|gb|EEM61057.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 287
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEVVAKKSQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|242279457|ref|YP_002991586.1| hypothetical protein Desal_1987 [Desulfovibrio salexigens DSM 2638]
gi|242122351|gb|ACS80047.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 319
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/303 (11%), Positives = 95/303 (31%), Gaps = 29/303 (9%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-- 74
++ + + ++ + I +NG I + + L + + G +
Sbjct: 1 MKKILIGVLLACSLFGCQNKSEEPGIIARVNGNPIYLSQLEYKYDLTH-EGVGGFVPSVE 59
Query: 75 -------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ +LIV+ L QE+E+ I + + + + F L ++
Sbjct: 60 QVRAEYGQILGDLIVQELVAQELEQREIPVSDKELKEAEDEV--RSDYPDDSFEQILIEE 117
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
I N ++ L Q ++ + E + +
Sbjct: 118 YIDINAWRSQLKYQLAMDKFFQDILRPEIKIDYKEAEKYYRT---------HLSDFYMPA 168
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ +G + + + ++K+ VS+ + ++ + ++
Sbjct: 169 GYKFVMVKGMGKDLVLKGVDLYREGLTPAA----ISAKLRKVSVREI-WIRNGQIPANWK 223
Query: 248 NLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEY 304
+ T +K V + + +K++ L+AY + K+++ +
Sbjct: 224 PFVEDLEPGKATPVITQKKEVFCLILKEKKEATLLTPLQAYPMVEKVLLERKLKEKFESW 283
Query: 305 VKK 307
+K+
Sbjct: 284 LKE 286
>gi|221215070|ref|ZP_03588037.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
multivorans CGD1]
gi|221165006|gb|EED97485.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
multivorans CGD1]
Length = 260
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 96/283 (33%), Gaps = 57/283 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + +F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRAMIENFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L D++ Q + + K A+
Sbjct: 114 AEVKARYDELVKTAGGNREYHLHHILV---DSEQQAKELIAKIKGGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T+ P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDEPVKTQFGWHIIRVDD 221
Query: 275 KRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ +KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFAQVKAQIAQQLVQQKLQTFEE----TLRQQAKIQ 260
>gi|332521070|ref|ZP_08397528.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola
5H-3-7-4]
gi|332043163|gb|EGI79360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola
5H-3-7-4]
Length = 482
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 28/292 (9%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK----IAVQELIVETLKKQEIEKSGI 95
+ + ++ D D+ K I L+L+ ++ + L+ + L + I
Sbjct: 58 DGVAAVVGEYIVLDSDVDKTI--LQLKASGNDISQFTNCELFGRLLEDKLYAHHAIQDSI 115
Query: 96 TFDSNT----VNYFFVQHARNTGLSAEDFSSFLDKQGI---GDNHFKQYLAIQSIWPDVV 148
VN + N + ++ F K I D F+ A + +
Sbjct: 116 VVSDAEIRSYVNQQVERFRVNFK-TEDEMLKFYKKDNIKALTDEMFEINKANKLA--SEM 172
Query: 149 KNDFMLKYGNLEMEIPA----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + + E+ K E + ++ Q + R+ +
Sbjct: 173 QRKIVDEIEVTPEEVRQYFSEIPDNEKPTFGTELKVAQIVIEPKVTPEAEQEVID-RLNE 231
Query: 205 AEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYL--LESDLHPQFQN-LLKKSQNNTTN 259
++ + F S + G+ + + + +F+ + +
Sbjct: 232 FKKDVEENGASFSAKALFNSADTGSKRTGGRLPTMNRAKPQMVKEFREATFSLQEGEISE 291
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P+ T+ G + + R G E + L + + E ++ +R N
Sbjct: 292 PFKTEFGWHIVYLEKIR--GQEYDARHILLIPEISDEAKAEAKEKLEGIRQN 341
>gi|221198202|ref|ZP_03571248.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
multivorans CGD2M]
gi|221208305|ref|ZP_03581308.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
multivorans CGD2]
gi|221171718|gb|EEE04162.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
multivorans CGD2]
gi|221182134|gb|EEE14535.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
multivorans CGD2M]
Length = 260
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 93/283 (32%), Gaps = 57/283 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + +F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRAMIENFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L ++ ++++
Sbjct: 114 AEVKARYDELVKTAGGNREYHLHHILVD------------SEQQAKDLIAKIKGGAKFED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T+ P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDEPVKTQFGWHIIRVDD 221
Query: 275 KRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ +KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFAQVKAQIAQQLVQQKLQTFEE----TLRQQAKIQ 260
>gi|195953257|ref|YP_002121547.1| hypothetical protein HY04AAS1_0882 [Hydrogenobaculum sp. Y04AAS1]
gi|195932869|gb|ACG57569.1| conserved hypothetical protein [Hydrogenobaculum sp. Y04AAS1]
Length = 436
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 6/143 (4%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK 67
+ + ++T F L F I S + S NG+ I+ D +R+A+ Q+
Sbjct: 11 TFAILSGIVTAAFFLWNFAAGNITSL--FHSSENCIAKANGDCISIADF-RRVAMGTNQQ 67
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFL 124
+ L++ + LI + L ++ +K G V Q + + + + + L
Sbjct: 68 MTPILKQEILNSLIDDDLLYEQAKKEGFLVSDKEVADIISQDPSFQVDGKFNFDRYKAVL 127
Query: 125 DKQGIGDNHFKQYLAIQSIWPDV 147
+ G ++ Y+ Q
Sbjct: 128 AEAGYTPETYESYIKKQLTIQKY 150
>gi|152980669|ref|YP_001353234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Janthinobacterium
sp. Marseille]
gi|151280746|gb|ABR89156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Janthinobacterium
sp. Marseille]
Length = 259
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 100/298 (33%), Gaps = 53/298 (17%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGELEKIAVQELIV 82
IVS AM+ + +NG+ I D+ + + Q+ EL + ELI
Sbjct: 8 LLAALIVSASLPAMAQNL-AVVNGKPIPSSRADVMIKQMTSQGQQDTPELRAMVKDELIN 66
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ QE +K G+ V +A QS
Sbjct: 67 REILIQEADKLGLGA-QADVKNQIE------------------------------IARQS 95
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
I + D++ K + +I A + K + +EY R +L ++
Sbjct: 96 ILIRALVADYLKKNPVKDADIKAEYDRFKAQASDKEYHARHILVE------------KED 143
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
A ++L+ L K +SK + G + + F + ++ + +
Sbjct: 144 EAKAIIAKLKGGAKFEDLAKASSKDPGSAANGGDLDWASPASFVKPFSDAMVALQKGQLS 203
Query: 259 -NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + D R +I + Q + +K + ++LRS A I
Sbjct: 204 ETPVKTQFGYHVIKLDDVR--TAKIPTLEEVKPQIAESLQQKKLQAFQQQLRSKAKIQ 259
>gi|301165392|emb|CBW24963.1| putative chaperone SurA precursor (peptidyl-prolyl cis-trans
isomerase) [Bacteriovorax marinus SJ]
Length = 303
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 20/307 (6%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------E 73
LI I S + + N VIT I + + ++ L
Sbjct: 4 LIFLIIFLTFSQTHAKLLDKTAAVFNDTVITLSQIERIQNNIASRRNISPLIYKKQKYTN 63
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ +I L ++++ + G + V + GLS SFL + +
Sbjct: 64 SEILELMIERLLIREKLSEIGYIRNDEQVEAEINNIEKRLGLSRSQLLSFLKSNNMSFDE 123
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + + + + E+ K + V FS+ + K++
Sbjct: 124 YFEIIRETIEFNIFNGRVIRPLISITDQEVKNYFYKTSKDKTLAFKYTIVDFSLEETKMK 183
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
L K DV + E L + LLK +
Sbjct: 184 KGML--------NIFPATLEKFQVNGV-LPKNFEDVQTNVLGDITEDGLTNNLKALLKNT 234
Query: 254 -QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRS 310
+ T P + K + EI L+A + + + + + + K+ +S
Sbjct: 235 DEGKFTKPIKLGDTYHVFFVKKKDLVESEIYLRAKDQIKGKLMGEQAGEVTSLWYKRAKS 294
Query: 311 NAIIHYY 317
I +
Sbjct: 295 KHYIKTF 301
>gi|307636864|gb|ADN79314.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
908]
gi|325995453|gb|ADZ50858.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
2018]
gi|325997051|gb|ADZ49259.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
2017]
Length = 299
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 96/284 (33%), Gaps = 35/284 (12%)
Query: 38 MSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S+ + T++G IT D I +R K+ + ++ +++ I L + E +
Sbjct: 40 ASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAK--- 96
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A + E F + + K+ ++ + +
Sbjct: 97 ---------------AEKLNQTPE-FKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + N T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|228919984|ref|ZP_04083338.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839697|gb|EEM84984.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 285
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 93/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACEQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + +K +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENNGLKDEEDYKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|228984228|ref|ZP_04144410.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228775515|gb|EEM23899.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 287
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 104/303 (34%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QG+ + FK
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKRFDETKKQVG---DQFDTLLKQQGMKEETFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L Q +E +++K+ E +L ++
Sbjct: 104 NMLRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|332981378|ref|YP_004462819.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mahella
australiensis 50-1 BON]
gi|332699056|gb|AEE95997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mahella
australiensis 50-1 BON]
Length = 350
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/358 (13%), Positives = 106/358 (29%), Gaps = 62/358 (17%)
Query: 9 LSDFIKLLTTYFVLI-IFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-----------I 56
+ F+++ V I IF +V+ +NG+ I D +
Sbjct: 1 MKRFVRMTALAMVAIFIFAGCSLVTVDPEKEKQLPVAEVNGDKILKADYVKQYDAYINAV 60
Query: 57 SKR----IALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNTV------ 102
++ L+ + ++ LI + L Q+ +K+ I +
Sbjct: 61 EQQYGIDKKTLETSTDYADTLAQMREDIVEGLITQKLVDQQAKKNNIALTDDDKKQVKDQ 120
Query: 103 ---------NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
F + ++ + L + F L
Sbjct: 121 LQQLKDAYGEEAFADMLKQQQMTEAELEQLLQGDAVQQKLF-DQLTAGI----------- 168
Query: 154 LKYGNLEMEIPANKQKMKNITVRE-YLIRTVLFSIPDNKLQNQGFVQ-----KRIKDAEE 207
+ E++ ++ K T E + +L SIP++K + K +AE+
Sbjct: 169 -TVTDEEVKKYYDENKDTEFTDPEMVKVSHILISIPEDKYSADETTKKTEYDKIKPEAEQ 227
Query: 208 --SRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF--QNLLKKSQNNTTNPY 261
++ + D +L K S G + E + P F + K++ + +
Sbjct: 228 VLAKAKAGDDFAELVKQYSDDAGTKDQGGTLTFSREDQIEPAFIEASFALKNKGDISGLV 287
Query: 262 VTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
T G I + +K K + K +++ + + I Y
Sbjct: 288 QTSYGYHIIRLEEKIPSKVHTFEEKKQEIHDTLLQQKKNDKITALIEEWKKGSDIKKY 345
>gi|256419700|ref|YP_003120353.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chitinophaga
pinensis DSM 2588]
gi|256034608|gb|ACU58152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chitinophaga
pinensis DSM 2588]
Length = 478
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/319 (14%), Positives = 103/319 (32%), Gaps = 20/319 (6%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
T+L + ++ ++ C V + K A +I + ++I D+ + L
Sbjct: 12 LTALVNMNRIFALSAGTLLLCQVAVAQQKMVA--DKIAAIVGDKIILRSDVEGEMVNLSR 69
Query: 66 QKINGELEKIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAE 118
+G L A ++++I + + + E+ + + V+ + ++ S E
Sbjct: 70 NNADGSLPPNAPCMIMEQIISQKVMVMQAERDSLPVSESDVDGQIENRIRYFQDVYGSPE 129
Query: 119 DFSSFLDKQGIGD-NHFKQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
F+Q + D + + + ++ A +
Sbjct: 130 KMKEVTGYSIYQLKERFRQPIKEGLLAKAMQDKITSSVKVTPSEVKKYFDAIPKDSLQYY 189
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
E I ++ P + + R+ + ++ D +L S+ K
Sbjct: 190 ESELEIGQIVIQ-PKATKEMDQYAIDRLLEFKKQVQEKTSDFGRLAILYSEDPGAKENKG 248
Query: 235 QYLL----ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
Y+L + + +N ++P +Q G I C KR G I ++ L
Sbjct: 249 VYILNRNDKQWDADFLAASFRLKENEISSPIKSQFGYHLIQ-CIKRQ-GDNITVQHILLK 306
Query: 291 QNTPTKIEKHEAEYVKKLR 309
N + + +R
Sbjct: 307 PNVTRSDLADATKLLDSVR 325
>gi|225862989|ref|YP_002748367.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB102]
gi|225790183|gb|ACO30400.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB102]
Length = 287
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|118476653|ref|YP_893804.1| peptidylprolyl isomerase [Bacillus thuringiensis str. Al Hakam]
gi|196044235|ref|ZP_03111471.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB108]
gi|229090092|ref|ZP_04221342.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42]
gi|229183351|ref|ZP_04310579.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1]
gi|301052687|ref|YP_003790898.1| peptidylprolyl isomerase [Bacillus anthracis CI]
gi|118415878|gb|ABK84297.1| protein export protein [Bacillus thuringiensis str. Al Hakam]
gi|196024874|gb|EDX63545.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus 03BB108]
gi|228600135|gb|EEK57727.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1]
gi|228693169|gb|EEL46880.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42]
gi|300374856|gb|ADK03760.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI]
Length = 287
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|30261271|ref|NP_843648.1| peptidylprolyl isomerase [Bacillus anthracis str. Ames]
gi|47526434|ref|YP_017783.1| peptidylprolyl isomerase [Bacillus anthracis str. 'Ames Ancestor']
gi|49184104|ref|YP_027356.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne]
gi|65318541|ref|ZP_00391500.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus
anthracis str. A2012]
gi|165873055|ref|ZP_02217675.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0488]
gi|167636140|ref|ZP_02394445.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0442]
gi|167641190|ref|ZP_02399444.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0193]
gi|170686825|ref|ZP_02878045.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0465]
gi|170709056|ref|ZP_02899485.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0389]
gi|177654451|ref|ZP_02936348.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0174]
gi|190566537|ref|ZP_03019454.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis Tsiankovskii-I]
gi|227815990|ref|YP_002815999.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. CDC 684]
gi|229603142|ref|YP_002865693.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0248]
gi|254682666|ref|ZP_05146527.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066]
gi|254725460|ref|ZP_05187242.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055]
gi|254734085|ref|ZP_05191798.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North
America USA6153]
gi|254740272|ref|ZP_05197964.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B]
gi|254753611|ref|ZP_05205647.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum]
gi|254758708|ref|ZP_05210735.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94]
gi|46396833|sp|Q81TU1|PRSA2_BACAN RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|30254885|gb|AAP25134.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. Ames]
gi|47501582|gb|AAT30258.1| peptidylprolyl isomerase PrsA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178031|gb|AAT53407.1| protein export protein prsA [Bacillus anthracis str. Sterne]
gi|164711210|gb|EDR16767.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0488]
gi|167510831|gb|EDR86223.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0193]
gi|167528494|gb|EDR91259.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0442]
gi|170126011|gb|EDS94909.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0389]
gi|170669348|gb|EDT20091.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0465]
gi|172080735|gb|EDT65817.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0174]
gi|190562089|gb|EDV16057.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis Tsiankovskii-I]
gi|227006723|gb|ACP16466.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. CDC 684]
gi|229267550|gb|ACQ49187.1| peptidylprolyl isomerase PrsA2 [Bacillus anthracis str. A0248]
Length = 285
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 93/301 (30%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKEVQKAKSQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ +K E ++ K+ E +L ++
Sbjct: 111 KFKLSMNKAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLD-----TGASFEELAKQESQDLLSKEKGGDLGYFHSGAMTPEFETAAYKLKIG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
++P + G I + K+DL +K + + + ++ A
Sbjct: 206 QISDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKKLLQSELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|254485739|ref|ZP_05098944.1| ppic-type ppiase domain protein [Roseobacter sp. GAI101]
gi|214042608|gb|EEB83246.1| ppic-type ppiase domain protein [Roseobacter sp. GAI101]
Length = 282
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 91/300 (30%), Gaps = 50/300 (16%)
Query: 22 LIIFCIVPIVSYKSWAM----SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
L F + +S + A + + T+NG IT G + IA L + +L +
Sbjct: 8 LAPFVVAASLSLPAMAQEEVKADTVVATVNGTEITVGHMI--IARATLPEQYQQLPPEVL 65
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFV-QHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ I++ L +Q + F LS E+
Sbjct: 66 FKGILDQLVQQTA-----------LEQSFEGDVPARVALSLEN----------------- 97
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
Q I +V++ ++ ++ E+ +L ++ L +
Sbjct: 98 -ERRQLIAGEVIEKAMAADISAEDLAAAYEEEYGSAEPTEEFNASHILVETEEDALAVKA 156
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQN 255
+ AE ++ + ++ S G + + P F+ +
Sbjct: 157 EIDGGADFAETAKEK-----------STGPSGPSGGSLGWFGPGMMVPAFETAVQDLEVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P TQ G I + DKR + + + + E + ++ A +
Sbjct: 206 AVSMPVETQFGWHIIKLEDKR--LKDAPALESVKEELELQLRQVKAQEKITEMTDAADVD 263
>gi|49480150|ref|YP_035301.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49331706|gb|AAT62352.1| protein export protein prsA [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 287
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGAGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKELVAKKAQDGEFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|332971078|gb|EGK10048.1| peptidyl-prolyl cis-trans isomerase [Desmospora sp. 8437]
Length = 337
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/338 (12%), Positives = 102/338 (30%), Gaps = 45/338 (13%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFC-----------IVPIVSYKSWAMSSRIRTTINGE 49
M ++ T LS F+ +L+ C + S ++ G
Sbjct: 1 MNKRLLTVLSAFL----AVSLLVAGCGTKDDKNGQETAKDGQATVLPTDSKKVVAEYEGG 56
Query: 50 VITDGDISKRIALLKLQKINGEL---EKIAVQELIVETLKKQEIEKS--GITFDSNTVNY 104
+T+G+++ + ++ L + +E++ + +Q + K
Sbjct: 57 KVTEGELNTYLNIMALFQPQMAAMMEAPEVKKEIVKNYIAEQMVAKRVKNGKKYEKQAEE 116
Query: 105 FFVQHARNTGLSAED----------FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
Q + +L + G K +L N
Sbjct: 117 SMKQFEEQLKQMPAEGKDKDKKKQDLEGYLKEHGFTKGQLKDFLEK--------NNKVSA 168
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP- 213
+ + E KQ K+ +R +L S ++ + + A +++
Sbjct: 169 YFEDRVNEKDLKKQYNKSDDFYNIKLRHILISTTEDPEGKKKKRSDKDAKARAEKVKKEL 228
Query: 214 KDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268
+ K + A K D G+ + + + + +K + ++P + G
Sbjct: 229 EGGKKFSEMAKKYSDDPGSKAQGGEMEGTPDQWVPEFSKAAVKTPIDKISDPIKSDYGYH 288
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
I + +++ L + + + Q + + VK
Sbjct: 289 IIQVTERKKLSFDKVKE-EMMGQKVTELYQAFIKDEVK 325
>gi|146278793|ref|YP_001168952.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|145557034|gb|ABP71647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
Length = 284
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 85/279 (30%), Gaps = 46/279 (16%)
Query: 38 MSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + T+NG+ IT G I+ R L L A+ + I+E L +Q +
Sbjct: 31 TADTVVATVNGQEITLGHMIALRAG---LPDQYQSLPDEALFKGILEQLIQQAALSQSVE 87
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ LS + N + +L+ VV+
Sbjct: 88 ----------GTVTKRDQLSLQ-------------NEERGFLSA-VAMRRVVEG----AV 119
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ + + EY +L + + + ++ A+ +R
Sbjct: 120 TDEALQAAYDARFADAAEQTEYNASHILVETEEEATKLKAEIEGGADFADMAREHSSDGA 179
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ G + + F++ ++ P TQ G + + +
Sbjct: 180 A-----------ANGGSLGWFGLGMMVKPFEDAVVGMKPGAVAGPIETQFGWHLVKLNET 228
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R E + + ++ A ++ ++ + A I
Sbjct: 229 R--IAEKPTLDEMRDELAGQIEQEAIARHIDEVTAKATI 265
>gi|260685020|ref|YP_003216305.1| putative foldase lipoprotein [Clostridium difficile CD196]
gi|260688678|ref|YP_003219812.1| putative foldase lipoprotein [Clostridium difficile R20291]
gi|260211183|emb|CBA66654.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile CD196]
gi|260214695|emb|CBE07344.1| putative foldase lipoprotein (late stage protein export
lipoprotein) [Clostridium difficile R20291]
Length = 321
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 93/295 (31%), Gaps = 28/295 (9%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQ------------------KINGELEKIAVQELIV 82
T+ G I+ + K IAL K K + + + + +LI
Sbjct: 16 ETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDIWDKEVEKGVKYKDKFKDLILDQLIT 75
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ + +K + V F + G E + L K GI D +
Sbjct: 76 TEVIYSQAKKDNLLPKKEDVEKSFKELKDAMG-KDEKYKEQLKKLGIDDEFLRDQQEKDL 134
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFSIPDNKLQ----NQGF 197
+ N F K + E+ K+ E +L D+ + +
Sbjct: 135 AMQNYQSN-FAKKTKISDEEMKKYYDTHKDEFKKDEVEASHILLKTVDDNNKPLSDKEKA 193
Query: 198 VQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
K+ + ++ +D K +K++ GK + + +F++ +
Sbjct: 194 EAKKKAEEALKEVKSGEDFAKVAKKYSQDTSASDGGKLGFFSRGQMVAEFEDAAFSMKKG 253
Query: 256 NTTNPYVTQKGVEYIAICDK-RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
++ TQ G I + D+ + K + Q K ++ + K+ +
Sbjct: 254 EVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIKDQLLKNKYQEQIEKLTKEAK 308
>gi|209517935|ref|ZP_03266768.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
gi|209501651|gb|EEA01674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
Length = 265
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/306 (17%), Positives = 99/306 (32%), Gaps = 52/306 (16%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE--KIAV 77
F L + + + S + + + T+NG+ ++ D I Q + +
Sbjct: 2 FALALGTALSLAS----SATEKPFVTVNGKPVSQADADLYIGQAHAQGFSDSPQLTNHVR 57
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
ELI + Q+ EK G F ++ + L
Sbjct: 58 DELIRREVLFQQAEKVG-----------FDRNPEVAARAEAARQKIL------------- 93
Query: 138 LAIQSIWP-DVVKN---DFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKL 192
+ Q+ W ++V+ DF+ K + ++ A +MK EY +R +L
Sbjct: 94 VQAQATWEIEIVRAYMQDFLKKNPVSDDQLKAMYNEMKSKGGSTEYKVRHILVK------ 147
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-SKIHDVSIGKAQYLLESDLHPQFQNLLK 251
++G + I RL L K + + G + S + F + +
Sbjct: 148 -DEGEAKDIIA-----RLNKGASFGDLAKESIDSDSRYNGGDLGWKTSSKVVKPFADAVS 201
Query: 252 -KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ T P T G I + D R L + + E+ VK LR
Sbjct: 202 HLHKGEYTQTPVKTGYGFHVIEVDDTRALQ--VPSFEEMKPMLYQQAQEELVDRMVKNLR 259
Query: 310 SNAIIH 315
+ A I
Sbjct: 260 AKATIQ 265
>gi|254437017|ref|ZP_05050511.1| PPIC-type PPIASE domain protein [Octadecabacter antarcticus 307]
gi|198252463|gb|EDY76777.1| PPIC-type PPIASE domain protein [Octadecabacter antarcticus 307]
Length = 284
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 51/305 (16%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KING 70
KLL + + + + + ++NG IT G + +L+ Q +
Sbjct: 6 KLLASAALFTFSASFAHADAHADITAETVVASVNGSDITLGQL----IMLRSQLPEQYQQ 61
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ + L+ + L Q++ + + + V R+
Sbjct: 62 LPDDVVFNGLVDQ-LVNQQLLGDTLDVEPKRIAIAIVNEVRSMR---------------- 104
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+VV G+ +++ + + EY +L + +
Sbjct: 105 -------------AGEVVNTFISAPVGDADLQAAYDARFADVAPDTEYNASHILVTTEEE 151
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-L 249
+ + V + ++ S G + + P F+ +
Sbjct: 152 ATEIKAMVDD-----------GADFAETAVEKSTGPSGPSGGDLGWFGLGMMVPAFEEAV 200
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
L + P TQ G I + + R+ L + ++ + L
Sbjct: 201 LTLDAGEVSAPVETQFGWHIIMLNEARETP--SPTLDDLREELAIDIQQQALDALINSLT 258
Query: 310 SNAII 314
+A I
Sbjct: 259 ESADI 263
>gi|261837623|gb|ACX97389.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori 51]
Length = 299
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|228932540|ref|ZP_04095421.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228827230|gb|EEM72983.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 285
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 93/302 (30%), Gaps = 49/302 (16%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILTLAACGQKDSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSEDDVEKEVQKAKSQYG---DQFKNILKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ A+ + E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDVKAHYK-------PEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLG-----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+NP + G I + DK++L + K + + ++K A
Sbjct: 208 SNPVKSPNGYHIIKLTDKKELQPYDEVKDSIRKNLEEERIANPTF---SHKLLQKELKKA 264
Query: 313 II 314
I
Sbjct: 265 NI 266
>gi|229016342|ref|ZP_04173287.1| Foldase protein prsA 1 [Bacillus cereus AH1273]
gi|229022583|ref|ZP_04179110.1| Foldase protein prsA 1 [Bacillus cereus AH1272]
gi|228738710|gb|EEL89179.1| Foldase protein prsA 1 [Bacillus cereus AH1272]
gi|228744934|gb|EEL94991.1| Foldase protein prsA 1 [Bacillus cereus AH1273]
Length = 286
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 100/299 (33%), Gaps = 41/299 (13%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L ++ + + + + S +I T+ G+ IT + ++ + K
Sbjct: 3 KAMLALAATSVIALSACGTSSSSDKIVTSKAGD-ITKEEFYNQM--------KTQAGKQV 53
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ +++E + + D V+ + + + G + F + L +QG+ + K
Sbjct: 54 LNNMVMEKVLIK-----NYKVDDKEVDKKYDEMKKQVG---DQFDTLLKQQGLKEETVKN 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ ++ + ++ A + K +E +L + + +
Sbjct: 106 GVRASLAQEQAIEK------SITDKDLKAKYEDYK----QEIKASHILVKDEETAKKVKE 155
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQN 255
+ + K EE + +D EK G + + +F +K ++
Sbjct: 156 ELAQ-GKSFEELAKKYSEDPGSKEK---------GGDLGFFGPDKMVKEFDEAARKLKKD 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + D KA + + K + + +K+++
Sbjct: 206 EVSEPVKTQHGYHIIKVTDTHADKTFDQAKADIKKEVVQEKTQDAQFMNDLMMKEIKKA 264
>gi|333029339|ref|ZP_08457400.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
coprosuis DSM 18011]
gi|332739936|gb|EGJ70418.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
coprosuis DSM 18011]
Length = 462
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 106/292 (36%), Gaps = 23/292 (7%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELE 73
L + +L +P + + + + E+I D+ + L+ +KI+G
Sbjct: 15 LRSAVLLCCLMALPKSVFAQNNVIDEVIWVVGDEIILKSDVESLRLQYLIDGKKIDGNPY 74
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSN----TVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +++ ++ L + + I + V+ + ++ + S E ++K
Sbjct: 75 CVIPEQIAIQKLFLNQAKLDSIEVSESAIIRQVDMYMAEYLKMFN-SKEKMEEVMNK--- 130
Query: 130 GDNHFKQYLAIQSIWPD---VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TV 183
+ ++ L + +V++ + E+ Q + ++ + +
Sbjct: 131 TTSQIRRDLRNSLREGETVKMVQDKLVGDIAVTPAEVRRFFQDLPQDSIPYIPTKVEVQI 190
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
+ +P L V+KR+++ + + L + S+ + G+ ++
Sbjct: 191 ITQLPRVSLAEVDDVKKRLREYTDQVNSGEMPFSTLARLYSEDLGSAMKGGEIGFMGRGM 250
Query: 242 LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
L P++ N+ + + T+ G I + +KR G+ ++ +
Sbjct: 251 LAPEYANVAFNMQEPGKVSKIVETEFGYHIIQLVEKR---GDRVNTRHILLK 299
>gi|229108722|ref|ZP_04238332.1| Foldase protein prsA 2 [Bacillus cereus Rock1-15]
gi|228674752|gb|EEL29986.1| Foldase protein prsA 2 [Bacillus cereus Rock1-15]
Length = 285
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E +I K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDI-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+ L +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|229149467|ref|ZP_04277703.1| Foldase protein prsA 2 [Bacillus cereus m1550]
gi|228634109|gb|EEK90702.1| Foldase protein prsA 2 [Bacillus cereus m1550]
Length = 282
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E +I K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDI-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+ L +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|30019316|ref|NP_830947.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579]
gi|229126572|ref|ZP_04255586.1| Foldase protein prsA 2 [Bacillus cereus BDRD-Cer4]
gi|46396826|sp|Q81GN0|PRSA2_BACCR RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|29894859|gb|AAP08148.1| Peptidyl-prolyl cis-trans isomerase [Bacillus cereus ATCC 14579]
gi|228656961|gb|EEL12785.1| Foldase protein prsA 2 [Bacillus cereus BDRD-Cer4]
Length = 285
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+ L +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|134295947|ref|YP_001119682.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
gi|134139104|gb|ABO54847.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
Length = 260
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 95/284 (33%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I + +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRVDAMVAQLVQQGQADSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + +F+ K +
Sbjct: 84 DVKAQIA------------------------------VAQQTVVLRSMIENFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A + REY + +L DN+ Q + + K A+
Sbjct: 114 AEVKARYDDLVKGAGGNREYHLHHILV---DNEQQAKDLIAKIKAGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDQPVKTQFGWHIIRVDD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 VRDVAPPPFDQV-KAQIAQQIVQQKLQAFEEG----LRQQAKIQ 260
>gi|329769980|ref|ZP_08261377.1| hypothetical protein HMPREF0433_01141 [Gemella sanguinis M325]
gi|328837540|gb|EGF87167.1| hypothetical protein HMPREF0433_01141 [Gemella sanguinis M325]
Length = 311
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 92/267 (34%), Gaps = 28/267 (10%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+T+ DI + I +L K A +I + L + K +N Q+
Sbjct: 38 VTEKDIVESIGANQLS-------KAATSMMIQKVLLDKYKNKINEKVIDEQLNKAQEQYG 90
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ F L ++G + +K L +++ ++ + L+ NK
Sbjct: 91 GK-----DKFEQILKQKGFTLDQYKDGLKVKAAQTIMINEYAGITEDKLKESYEKNK--- 142
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFASKI-- 226
+Y + +L S+ + N ++ K AEE +++ D L K S
Sbjct: 143 -----HQYHLAHILISVKSSSNPNGLSDEEAKKKAEEVLKKIKDGGDFATLAKEYSNDTG 197
Query: 227 HDVSIGKAQYLLESD---LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ + G + + D + +++ ++ T G I + D +D +
Sbjct: 198 NASNGGDLGWSSKEDNSYVSEFNNAAYALNKDQVSDVVKTPFGYHIIKVLDTKDSSYDE- 256
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRS 310
LK L + ++ K L+
Sbjct: 257 LKTSLEEKAAEQAVKNDSTIVSKALKK 283
>gi|317012021|gb|ADU82629.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori
Lithuania75]
Length = 299
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 95/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
S +F + + K+ ++ + ++
Sbjct: 101 D-------------------STPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKVQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKRAKI 295
>gi|327479988|gb|AEA83298.1| NifM protein, putative a peptidyl-prolyl cis/trans isomerase
[Pseudomonas stutzeri DSM 4166]
Length = 292
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 89/255 (34%), Gaps = 10/255 (3%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ + E+I ++L +E E G+ V + + A LD
Sbjct: 32 SQQREQAERIVGRQLQLENAVLHSAEACGVVIPDEQVADAWAEIAARYE-DPLALHKALD 90
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
G+ + +Q LA + V++ + + + E+ + + + L R +
Sbjct: 91 DSGLDEAGLRQLLARELKVETVLQRVCAGLPEITDTEVSLYYFNHPERFVRPATRLARQI 150
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRL--RLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
L ++ ++ +N R + RL + + + K + + G +
Sbjct: 151 LITVNEDFPENSRTSAWRRINLIAERLLRKPQRFAEQALKHSECPSAMEGGSLGLIRPGV 210
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL---SAQNTPTKI 297
L+PQ + L T G + C++ G ++L+ L + +
Sbjct: 211 LYPQLEACLFALRAGEIGPVVETPLGFHLL-FCEEIHPAGHLSLQEVLPHLREKLRARQY 269
Query: 298 EKHEAEYVKKLRSNA 312
E+H+ ++ L +A
Sbjct: 270 ERHQRAWLAGLLQSA 284
>gi|296450315|ref|ZP_06892075.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296878727|ref|ZP_06902731.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
gi|296260876|gb|EFH07711.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296430301|gb|EFH16144.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
Length = 380
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 94/285 (32%), Gaps = 24/285 (8%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEI 90
SS + TI + IT + KR+ L + E ++ +I + E
Sbjct: 87 SSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMITSDILSSEA 146
Query: 91 EKSGITFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
K I+ ++ ++ + + G++ E+F L + + + + K + + +
Sbjct: 147 AKEKISITNDQLDAQYNNLMSSIESAMGMTKEEF---LKQFDLTEKYIKDDMKKELVASK 203
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + E NK + LI+TV + ++K ++
Sbjct: 204 YLNEKSKVTDKEAENYYNKNKNNYLQVRASHILIKTVDDKGKQVSNSKKAELKKEAEEIL 263
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQ 264
+ +K++ S G + + + F+ + +N +
Sbjct: 264 KKAQAGEDFATLAKKYSEDSSAESGGDLGFFGKGQMVESFEKAAFALKKGEVSNKLVESD 323
Query: 265 KGVEYIAICDKR-----DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
G I D++ ++ ++ Q+ I+ + +Y
Sbjct: 324 YGYHIIKKTDEKYQPFEEIKSDLVSSLTSEKQSL--LIQNLKEKY 366
>gi|213581625|ref|ZP_03363451.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL 242
+ + + N + ++++ K S+ + G +
Sbjct: 1 MLLKPSPIMNDQQARLKLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIF 60
Query: 243 HPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKH 300
P F++ L K + + P + G I + D R + A + + + K +
Sbjct: 61 DPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLMNRKFSEE 120
Query: 301 EAEYVKKLRSNA 312
A ++++ R++A
Sbjct: 121 AATWMQEQRASA 132
>gi|301052807|ref|YP_003791018.1| peptidylprolyl isomerase [Bacillus anthracis CI]
gi|300374976|gb|ADK03880.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI]
Length = 285
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKEVQKAKSQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ +K E ++ K+ E +L ++
Sbjct: 111 KFKLSMNKAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFHSGAMTPEFETAAYKLKIGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
++P + G I + K+DL +K + + ++ A I
Sbjct: 208 SDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKNLLQSELKKANI 266
>gi|47568364|ref|ZP_00239065.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241]
gi|47554912|gb|EAL13262.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241]
Length = 285
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 94/299 (31%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISLLMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K V+ + G + F++ L+ + D FK +
Sbjct: 64 VITKKYK----------VSDADVDKEVQKAKNQYG---DQFTAVLENNRLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGKMTPEFETAAYKLKVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
++P + G I + K+DL +K + +I + ++K A I
Sbjct: 208 SDPVQSPNGYHIIKLTGKKDLQPFNEVKDSIRKNLEAERIADPTFSHKLLQKELKKANI 266
>gi|326790776|ref|YP_004308597.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
lentocellum DSM 5427]
gi|326541540|gb|ADZ83399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
lentocellum DSM 5427]
Length = 330
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/334 (12%), Positives = 95/334 (28%), Gaps = 43/334 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIV----------SYKSWAMSSRIRTTINGEVITDGDISKRIAL 62
+KLL VL++ ++ S + + T+ +T + +++
Sbjct: 1 MKLLKKGIVLLMVGLLGFGVVGCSKVADNSQTNNKTEDVVIATVGDGKVTKKALDQQLVY 60
Query: 63 L----------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
L + E +++ V L+ L + ++ + ++ V+
Sbjct: 61 LDSLMQWQYGEDYESNEEAMNYYNEQKRLMVDYLVEIQLIISKAQEYDVNVTADDVDEEL 120
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
++ + F L G+ KQ L I VV + EI
Sbjct: 121 E-LLKSDYDTEAAFEEALTTSGMSLEELKQMLKEDLIVNQVVTASTKD-ITVSDEEIKTY 178
Query: 167 KQKMKNITVREY--LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ E + +L + + + + K + A+
Sbjct: 179 YDGNIDSFKTEAGATMSHILVATEEEAKEIKAKYDKGTS--------FEDLAEEYGTDAT 230
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK----RDLGG 280
K + Y + + + + P TQ G I + D R
Sbjct: 231 KSQGGLLEYIPYNSTKYDADFLASAKQLDEGEVSEPVKTQNGWHLIKVTDVNKEERIKSY 290
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + Q K + + VK+ + + I
Sbjct: 291 DEVKD-EIKEQLLIQKQNEVVEKKVKEWKESTNI 323
>gi|254448730|ref|ZP_05062188.1| foldase protein PrsA, putative [gamma proteobacterium HTCC5015]
gi|198261738|gb|EDY86025.1| foldase protein PrsA, putative [gamma proteobacterium HTCC5015]
Length = 306
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 102/316 (32%), Gaps = 50/316 (15%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISKRIA 61
L+ K L V+ + A + ++NG IT I + +
Sbjct: 3 LNMLKKTLLATAVIGALSLTACKDNGQQAQQPGLFPVKGEVVASVNGVDITQPQIDEYVD 62
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
V+ELI + +Q + G D V + A NT +
Sbjct: 63 YRAGMNQPAADP---VEELINLEILRQAAVEQGF-ADKPEVRAAMTRAATNT------LA 112
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+ L ++ ++ + ++ ++ + +E + E+
Sbjct: 113 NPL---------VREKISGDVS-DEDLRAEYDEQVKMME---------EASGGGSEFNAS 153
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+L +++ + + +++ A+ + L E+ + S G +
Sbjct: 154 HILV---ESEEEAKALIKQLDDGADFATL--------AEENSVGPSASSGGSLGWATADT 202
Query: 242 LHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIE 298
F L++ ++ T P TQ G I + R+ E + +Q ++
Sbjct: 203 YVEAFATALEQLEDGSYTAAPVETQFGWHVILRSESRESQAPEAPAFDMVKSQLEKVVMQ 262
Query: 299 KHEAEYVKKLRSNAII 314
K Y++ LR+ A +
Sbjct: 263 KRMQSYMENLRNKANV 278
>gi|89901176|ref|YP_523647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
gi|89345913|gb|ABD70116.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
Length = 261
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 104/288 (36%), Gaps = 52/288 (18%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEK 92
+ +S++ +NG+ + + + E++ +E+I + QE +K
Sbjct: 19 APTVSAQNVAIVNGKAVPTARMDALAQQVARSGRPITPEMQGQLKEEVIAREIFMQEAKK 78
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G+ + EDF + +D LA Q++ + ++
Sbjct: 79 QGLD-------------------TTEDFRTQMD------------LARQTLLIRELFANY 107
Query: 153 MLKYGNLEMEIPANKQKMKNI-TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ +I A K + +EY R +L D ++K
Sbjct: 108 QKTSPVTDADIKAEYDKFAAANSGKEYRARHILVEKEDQAKAIIAQLKK----------- 156
Query: 212 LPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGV 267
+++ K +SK + G + S+ P+F Q L+K ++ TT P +Q G
Sbjct: 157 -GGKFDEIAKKSSKDPGSGANGGDLDWANPSNYVPEFSQALIKLTKGQTTETPVKSQFGY 215
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D RD ++ + Q ++ +Y ++LR+ A I
Sbjct: 216 HIIRLDDVRD--AQLPKFDDVKPQIAQQLQQQKMTKYQEELRAKAKIE 261
>gi|196036230|ref|ZP_03103629.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus W]
gi|218902361|ref|YP_002450195.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH820]
gi|228926303|ref|ZP_04089377.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228944873|ref|ZP_04107236.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195991205|gb|EDX55174.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus W]
gi|218539904|gb|ACK92302.1| peptidylprolyl isomerase PrsA2 [Bacillus cereus AH820]
gi|228814901|gb|EEM61159.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228833400|gb|EEM78963.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 285
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMIAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVEKEVQKAKSQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ +K E ++ K+ E +L ++
Sbjct: 111 KFKLSMNKAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFHSGAMTPEFETAAYKLKIGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
++P + G I + K+DL +K + + + ++ A I
Sbjct: 208 SDPVQSPNGYHIIKLTGKKDLKPYDEVKNSIRKNLEEERTADPIFGKKLLQSELKKANI 266
>gi|188995416|ref|YP_001929668.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas
gingivalis ATCC 33277]
gi|188595096|dbj|BAG34071.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas
gingivalis ATCC 33277]
Length = 460
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 89/280 (31%), Gaps = 26/280 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73
+ +++ + S + + + E I DI L G +
Sbjct: 6 MRICIIMLSLLFWALPSMGQKNVIDEVVWMVGDEPILRSDIEATKRFLLSSGRPLEGNAD 65
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY----FFVQHARNTGLSAEDFSSFLDKQGI 129
+++ V+ L + + I + VN + + + G S E + +++
Sbjct: 66 CYIPEQIAVQKLFLNQAKIDSIEVNEADVNRYVDMYLADYIQQFG-SKEKMEEYFNRK-- 122
Query: 130 GDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKN------ITVREYLI 180
++ ++ ++V + EI + T E +
Sbjct: 123 -YTQIREEQRVEVRNSEIVRMMRKKIDENVKVTPSEIRQYFASLPQDSLPYIPTTVEVQL 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLL 238
+ I L ++KR+++ + +D L + S+ + G+ ++
Sbjct: 182 LAIKPVI---SLHETDAIKKRLREFSDEINEGRRDFTTLARLYSEDSKTALQGGEYGFVS 238
Query: 239 ESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ L +F ++ + T G + + +KR
Sbjct: 239 KASLDAEFARVVFSLTDTKRVSPIIKTDDGYHIVQLIEKR 278
>gi|15611231|ref|NP_222882.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
J99]
gi|10720360|sp|Q9ZMQ7|Y175_HELPJ RecName: Full=Uncharacterized protein jhp_0161; Flags: Precursor
gi|4154677|gb|AAD05744.1| putative PEPTIDYL-PROLYL CIS-TRANS ISOMERASE [Helicobacter pylori
J99]
Length = 299
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 96/284 (33%), Gaps = 35/284 (12%)
Query: 38 MSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S+ + T++G IT D I +R K+ + ++ +++ I L + E +
Sbjct: 40 ASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAK--- 96
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A + E F + + K+ ++ + +
Sbjct: 97 ---------------AEKLNQTPE-FKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|323526035|ref|YP_004228188.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
gi|323383037|gb|ADX55128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
Length = 259
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 78/279 (27%), Gaps = 50/279 (17%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKI--AVQELIVETLKKQEIEKSGITFDSN 100
+NG I I L Q + +EL+ + QE + G+ +
Sbjct: 25 IAVVNGTPIPKSRADALIDQLVHQGQQNTPQLQMAVREELVNREVLMQEALRRGLQ-NRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + ++ + V +
Sbjct: 84 DIKAQVA---------VAQQTVVLRAL------IEDFVKKNAPTDAEVTARYNALI---- 124
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K+ +EY + +L DN+ Q + + K A +L
Sbjct: 125 ----------KDAGGKEYHLHHILV---DNEQQAKDLIAKIKGGA---------SFEELA 162
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDKR 276
K SK + G + P+F + + + P TQ G I + D R
Sbjct: 163 KQYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMSDTPVHTQFGWHIIRVDDVR 222
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + Q ++ + + LR NA I
Sbjct: 223 SIT--PPPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ 259
>gi|228906899|ref|ZP_04070766.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200]
gi|228852647|gb|EEM97434.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200]
Length = 285
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T +T D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ + + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENNRLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKNKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEIKNSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|228957536|ref|ZP_04119288.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228802128|gb|EEM48993.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 285
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+ L +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|308183972|ref|YP_003928105.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
SJM180]
gi|308059892|gb|ADO01788.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
SJM180]
Length = 299
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAK---- 96
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
A + E F + + K+ ++ + ++
Sbjct: 97 --------------AEKLNQTPE-FKAMM-------EAVKKQALVEFWAKKQAEEVKKVQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|261839036|gb|ACX98801.1| Protein maturation protease (Peptidylprolyl isomerase)
[Helicobacter pylori 52]
gi|317181484|dbj|BAJ59268.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
F57]
Length = 299
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTEKLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295
>gi|229154723|ref|ZP_04282838.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342]
gi|228628671|gb|EEK85383.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342]
Length = 287
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 103/300 (34%), Gaps = 51/300 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +V+T GDI+K ++++ G K +
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKVVTSKAGDITKEDFYTQMKQQYG---KQVLN 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + + V+ F + + G + F + L +QGI + K +
Sbjct: 55 NMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLLKQQGIKEETIKNGV 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q +E +++K+ E +L ++
Sbjct: 107 RAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K ++ + K +L K S+ G + + +F+ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKLKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P +Q G I + D ++ KA + + K + E +K+++
Sbjct: 202 EVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGEFMNDLMMKEIKKA 261
>gi|152990310|ref|YP_001356032.1| peptidyl-prolyl cis-trans isomerase [Nitratiruptor sp. SB155-2]
gi|151422171|dbj|BAF69675.1| peptidyl-prolyl cis-trans isomerase [Nitratiruptor sp. SB155-2]
Length = 272
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 100/301 (33%), Gaps = 44/301 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQEL 80
+ ++ + + AM++++ +NG IT DI+ ++ + + ++ ++++ + +
Sbjct: 5 VATGLMAVSLIATQAMAAKVLAKVNGHAITTEDIAPMLSQIGARFEQLPPQMKQQVIDKA 64
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I L K++ KSG+ +F L K +
Sbjct: 65 IERELLKEKALKSGVEKSK-------------------EFKEALAK-----------IKR 94
Query: 141 QSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+K + +K + E + K K R +L + K +
Sbjct: 95 DLALQIWMKKKYDSIKVTDKEAKAFYQKNIDKFKRPELVHARHIL--VKSEKEAQDIINE 152
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNN-T 257
+ + + + + + G + + + F + T
Sbjct: 153 LKKTPKNQLKQKFI---ELAKTKSVGPSGKRGGDLGFFKKGQMVKPFSDAAFSLKPGTFT 209
Query: 258 TNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P TQ G I + +K+ G + + AQ K ++ + +KL+ +A I
Sbjct: 210 TKPVQTQFGYHIIYVEEKKPAGTIPFDQIKDR-IKAQLKMKKFQEIVQKEAEKLKKSAKI 268
Query: 315 H 315
Sbjct: 269 Q 269
>gi|312792832|ref|YP_004025755.1| ppic-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179972|gb|ADQ40142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 339
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/315 (18%), Positives = 108/315 (34%), Gaps = 33/315 (10%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRI------- 60
+ + VL+I I + +R +NGE IT + I+ R
Sbjct: 5 TKIVLFSIAAVVLLIILIAVTPEIVRYVDENRAVAIVNGEKITKKEFAINYRSQINYYGL 64
Query: 61 --ALLKLQKINGELEKI----AVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHAR 111
A L + + E+ + LI+ ++ Q+ K IT S ++ Q+ +
Sbjct: 65 DKAFLSQKVGDKTYEQQIKENVLDGLIIRQIELQQARKRNITLSSAEKKAIDQQIEQY-K 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ S +F +L G +N +K + Q + + K + E+E N K
Sbjct: 124 SDSQSGAEFKQYLQTIGATENEYKDQVIKSQIVSKLYDEVTKNQKASDAEIESYYNSHKS 183
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV- 229
+ E +LF + D+K + + +++ ++ KL + S+
Sbjct: 184 DFV---EVKASHILFKVNDSKEEAAKKKKAEEILQM---IKVGQNFEKLAQKYSEDETTK 237
Query: 230 -SIGKAQYLLE----SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
G YL + +F N + +N T G I + D++ L
Sbjct: 238 QKGGDMGYLRKNIIIQYYGNEFGNAVFSLGIGEISNIVQTNDGFHIIKVTDRKQLLLSDV 297
Query: 284 LKAYLSAQNTPTKIE 298
S + K E
Sbjct: 298 KDEIKSTIESQKKDE 312
>gi|288941155|ref|YP_003443395.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium
vinosum DSM 180]
gi|288896527|gb|ADC62363.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium
vinosum DSM 180]
Length = 645
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 21/189 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK--LQKINGE-----------LEKIAVQELIVETLK 86
I T+NG I ++ +R+ + L++ G L ++ LI E L
Sbjct: 39 EPIAATVNGVEIPARELDRRVQETRFELRERLGAAYDPAAFDDQRLRAEVLETLIQEALL 98
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ + G+ V + + + L QG+ ++ L +
Sbjct: 99 MDVVGRLGLRVSDQEVQMQILSDPAFVSEGRFDKDTYERLLRFQGLTPAMYEAQLRQKMS 158
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+++ + E+ A K + ++ I + + +++ +
Sbjct: 159 ATQLIRA-----VSSSELATRAELDTYKRLMGQKREISYLRLPLAEHRTDEPIDEARITA 213
Query: 204 DAEESRLRL 212
+ +R R
Sbjct: 214 YYDSNRARF 222
>gi|217033999|ref|ZP_03439421.1| hypothetical protein HP9810_891g3 [Helicobacter pylori 98-10]
gi|216943507|gb|EEC22958.1| hypothetical protein HP9810_891g3 [Helicobacter pylori 98-10]
Length = 299
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKIPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|316931933|ref|YP_004106915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris DX-1]
gi|315599647|gb|ADU42182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris DX-1]
Length = 305
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 86/282 (30%), Gaps = 49/282 (17%)
Query: 39 SSRIRTTINGEVITDGDI---SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
++ + +NG I D+ + + Q ++ + LI + + E I
Sbjct: 40 ANPVLAKVNGAEIRQSDVDLAEQELGPSLAQMDPASKKENVLAFLIDMKIVAKAAEDKKI 99
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
DF L + + + DV+ +
Sbjct: 100 QDS-------------------ADFKKRL-----------DFARNRLLMDDVLAAEGKAA 129
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ M+ + + +E R +L D ++K D
Sbjct: 130 TTDEAMKKVYEEAAKQISGEQEVHARHILVETEDEAKAVAEELKK------------GAD 177
Query: 216 CNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273
+L K SK S G + + + P+F + ++P +Q G I +
Sbjct: 178 FAELAKKKSKDPGASDGGDLGFFTKDQMVPEFSAVAFALEPGKISDPVKSQFGWHIIKVE 237
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+KR+ + + + K +++YV KLR A +
Sbjct: 238 EKRNRKPPSFDQVKAQIEQYVAR--KAQSDYVSKLRQAAKVE 277
>gi|218896099|ref|YP_002444510.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus G9842]
gi|228899723|ref|ZP_04063971.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
gi|228906786|ref|ZP_04070655.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
gi|228964109|ref|ZP_04125234.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|218541193|gb|ACK93587.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus G9842]
gi|228795596|gb|EEM43078.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228852790|gb|EEM97575.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
gi|228859905|gb|EEN04317.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
Length = 289
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 100/300 (33%), Gaps = 41/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + + +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEMKKQYG---DQFDTLMKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V + + ++ A + K E +L + + +
Sbjct: 104 NSVRAQLAQEKAV------EQSITDKDVKAKFEDYKK----EIKASHILVKDEETAKKVK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F+ +K +
Sbjct: 154 DELAQ-GKSFEELAKQYSEDTGSKEK---------GGDLGFFGPGKMVKEFEEAAQKLKK 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ + P TQ G I + D KA + K + + +K+++
Sbjct: 204 DEVSEPVKTQFGYHIIKVTDNHADATFDKSKADIKKSLAQEKTQDAQFMNDLMMKEIKKA 263
>gi|229143873|ref|ZP_04272292.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST24]
gi|228639634|gb|EEK96045.1| Foldase protein prsA 2 [Bacillus cereus BDRD-ST24]
Length = 285
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 IITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNIGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+ L +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|317179430|dbj|BAJ57218.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
F30]
Length = 299
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMTPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|157164251|ref|YP_001467105.1| holo-[acyl-carrier-protein] synthase [Campylobacter concisus 13826]
gi|112801387|gb|EAT98731.1| foldase protein PrsA [Campylobacter concisus 13826]
Length = 272
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/292 (18%), Positives = 95/292 (32%), Gaps = 41/292 (14%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISK----RIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ +++ + T++G+ I D DIS + K+ +K + +LI L +
Sbjct: 13 AAAVTLNAAVVATVDGDAINDSDISALLSAAMPGFDASKLQPNEKKRIIDDLINRKLLLK 72
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ + SGI V+Y A G +A++ +
Sbjct: 73 DAKASGIE---KDVDYIKAVKAAQEG-----------------------IAVELYMRKLF 106
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+K + ++ NK K + R +L + D K N Q + E
Sbjct: 107 DG---IKVSDSDLRDFYNKNKASMNQPAQARARHIL--VEDEKTANDIIAQLKNLKGEVL 161
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKG 266
+ + +K K G+ + +S + F + N T T P TQ G
Sbjct: 162 TKKFAE--LASQKSIDKGSAAHGGELGWFGQSQMVKPFADAAFSMANGTVSTKPVKTQFG 219
Query: 267 VEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I D + G K + K + + + LR A I Y
Sbjct: 220 YHVILKEDGKAAGTVSFEQAKPEIEQAVKMEKFQAAVRQKSEALRQKAKIEY 271
>gi|229189238|ref|ZP_04316262.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
gi|228594282|gb|EEK52077.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
Length = 288
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 103/303 (33%), Gaps = 48/303 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ N + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQ 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + D V+ + + + G + F + L +QG+ + K
Sbjct: 53 TLNNMVMEKVLIK-----NYKVDDKEVDKKYDEMKKQLG---DQFDTLLKQQGLKEETVK 104
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ +E +++K E +L ++
Sbjct: 105 NGVRASLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DE 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
+K ++ + K +L K S+ G Y + +F++ K
Sbjct: 145 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKL 199
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K++ + +K++
Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKMQDGQFMNDLMMKEI 259
Query: 309 RSN 311
+
Sbjct: 260 KKA 262
>gi|108562596|ref|YP_626912.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori HPAG1]
gi|107836369|gb|ABF84238.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori HPAG1]
Length = 299
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
S +F + + K+ ++ + ++
Sbjct: 101 D-------------------STPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKVQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|147676453|ref|YP_001210668.1| parvulin-like peptidyl-prolyl isomerase [Pelotomaculum
thermopropionicum SI]
gi|146272550|dbj|BAF58299.1| parvulin-like peptidyl-prolyl isomerase [Pelotomaculum
thermopropionicum SI]
Length = 324
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/330 (14%), Positives = 114/330 (34%), Gaps = 49/330 (14%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL-QKING-- 70
+ + L+I ++ S SR T+NGE IT G++S+R+ +K + G
Sbjct: 7 QFIAAAVFLVIVAVLSGCS-------SRAVATVNGEKITAGELSQRLEEIKSNLEKQGFD 59
Query: 71 -----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
L + ++++I L QE +K G V SAE+
Sbjct: 60 FSGDKGKAFMESLRQETLEQMINTRLMLQEAKKLG-PLTPEQVQEIIKPLKEQFS-SAEE 117
Query: 120 FSSFLDKQGIGDNH------FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+ FL + + + ++ + +++ + ++
Sbjct: 118 YQDFLAQIKMSEEEAAYILNLQEQVTGDVA---------PPAEADIKKYYDEHLEEFSRP 168
Query: 174 TVREYLIRTVLFSIPDN----KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ +R +LF + +Q+ + + + ++L+ KD +L + S+
Sbjct: 169 E--QLQVRHILFFVDGGDKGYPVQHTDAEAREMAEEAIAQLKAGKDFAELAREKSEDSGT 226
Query: 230 -SIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGE--IAL 284
+ G + +F + T P T+ G I + K + +
Sbjct: 227 RADGGLYTFSRDEAVKEFADAAYALKVGEYTADPVKTEYGYHIIKLEKKIPARQDPFEEV 286
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ ++ ++ E++++ + A I
Sbjct: 287 RQDIAGLLLEQARQEKFGEFMQQAKDRAEI 316
>gi|47567527|ref|ZP_00238238.1| rotamase family protein [Bacillus cereus G9241]
gi|47555722|gb|EAL14062.1| rotamase family protein [Bacillus cereus G9241]
Length = 288
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 104/303 (34%), Gaps = 48/303 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ N + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQMK-------NSQTGKQ 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + D V+ F + + G + F + L +QG+ + K
Sbjct: 53 TLNNMVMEKVLIK-----NYKVDDKEVDKKFDEMKKQLG---DQFDTLLKQQGLKEETVK 104
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ +E +++K+ E +L ++
Sbjct: 105 NGVRASLA-------------QEKAIEKTITDKELKDYYKPEIKASHILVK-------DE 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 145 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKL 199
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K++ + +K++
Sbjct: 200 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKMQDGQFMNDLMMKEI 259
Query: 309 RSN 311
+
Sbjct: 260 KKA 262
>gi|312129916|ref|YP_003997256.1| ppic-type peptidyl-prolyl cis-trans isomerase [Leadbetterella
byssophila DSM 17132]
gi|311906462|gb|ADQ16903.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leadbetterella
byssophila DSM 17132]
Length = 440
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 95/306 (31%), Gaps = 17/306 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQKINGELEK 74
+ VL + ++P+ +I I+ I ++ R K +
Sbjct: 1 MLKKVVLALIMVLPLCVKAQSTNVDKIIAKIDNYYILKSEVESLRARYAK--EGQNVSSC 58
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A++ + ++ L + E + +++ + + + +D+ G
Sbjct: 59 EALESMAIQKLLVAKAEIDSVIVENDQIKDQLDARMNQMVTVYGNEKNIVDQFGKSIETL 118
Query: 135 KQYLAIQS---IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSI 187
K + + + + +K K +E+ + + + ++ + ++
Sbjct: 119 KNEMRSELKEQMTAEKMKGVIYEKVSVTPLEVKKFYESIPKDSLWKVGQKVKLSQIVRLA 178
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQ 245
P + K R++ +D KL K S+ + G + + P+
Sbjct: 179 PLTPELRTDLITKLQDIKR--RIQSGEDFGKLAKEYSEDQGSAANGGDLGWSKRGMMVPE 236
Query: 246 F-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F + ++ ++ G I KR G E + L + Y
Sbjct: 237 FEAAAMSLDTGQISDIVESEYGFHLIQTLAKR--GQEYRARHILLMPDYQILSTDEPKRY 294
Query: 305 VKKLRS 310
+ LR
Sbjct: 295 LDSLRK 300
>gi|254469068|ref|ZP_05082474.1| foldase protein PrsA, putative [beta proteobacterium KB13]
gi|207087878|gb|EDZ65161.1| foldase protein PrsA, putative [beta proteobacterium KB13]
Length = 257
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 97/294 (32%), Gaps = 47/294 (15%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIV 82
F ++ + + ++ + + T+N + + I LK Q + E++K + L+
Sbjct: 5 FNLIIFLYFICPSVFAEVLITVNSQTLNPNLIDYISDELKAQGRDVDEEMKKNIIDRLVE 64
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L K GIT D + L+ + + + K+Y+
Sbjct: 65 LELLTDAATKEGITSD--------TKFLSKVELTYMEMA--------YTEYLKKYIK--- 105
Query: 143 IWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
++ +I K K +EY + +L + G ++
Sbjct: 106 ------------EHPISNEDIDLAYKNFTKQFNEQEYKGQHILVKTKNEAESLIGKIEN- 152
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNP 260
+ E D EK G + D+ F N +K Q N +
Sbjct: 153 GNEFSELAKNFSIDKASAEK---------GGDLDWFRLEDMVESFANEIKNLQINELSGA 203
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ TQ G + DK+ L + + + ++ ++K+L+ NA I
Sbjct: 204 FQTQFGWHVFKLTDKKPLT--PPELSEIKKRLEDDLKKRKLKNHIKELKQNAEI 255
>gi|217958629|ref|YP_002337177.1| peptidylprolyl isomerase [Bacillus cereus AH187]
gi|229137839|ref|ZP_04266438.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26]
gi|217067290|gb|ACJ81540.1| peptidylprolyl isomerase PrsA1 [Bacillus cereus AH187]
gi|228645496|gb|EEL01729.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26]
Length = 287
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 101/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKFDEMKKQYG---DQFDTLLKQQGIKEETLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K+ E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKDNYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F+ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEEAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + D ++ KA + + K + +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTDIKEPEKSFEQSKADIKKEIVQKKAQDGAFMNDLMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|119491393|ref|ZP_01623412.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lyngbya sp. PCC
8106]
gi|119453388|gb|EAW34551.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lyngbya sp. PCC
8106]
Length = 253
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 31/274 (11%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
T+N E IT G L+ + +G+L+ + L L K+ + + +S +V
Sbjct: 6 LTVNDEPITLGQ------SLRYLQSSGKLQSFIGEMLRQYVLDKELAAQENLNINSASVE 59
Query: 104 YFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ LS + F +L++ + + F Q + LK ++ +
Sbjct: 60 QAVINFRLERNLSDPQAFQEWLERNQMSYDSFHQQVEAGF-------KRETLKLSIVQPQ 112
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ A Q+ K+ L R V+ + + +R+++ E +L +
Sbjct: 113 LEAYFQERKSFLDTIILSRIVV-----ADYELAETLHRRLQEEEAR-------FEQLARE 160
Query: 223 ASKIHDVSI-GKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S + ++ G + L + ++ + P + + +
Sbjct: 161 YSLTPERNVNGMMGAVSLGSLPENLKPIMTVATLGQIVGPVEIEGRWCIFRVEQLIEASF 220
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
E L + E+ E +K L I
Sbjct: 221 EDPK---LKQKLQNELFERWINEKLKSLTVKMQI 251
>gi|332673018|gb|AEE69835.1| cell binding factor 2 [Helicobacter pylori 83]
Length = 299
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKV 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|308182349|ref|YP_003926476.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori PeCan4]
gi|308064534|gb|ADO06426.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori PeCan4]
Length = 299
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ + K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYDANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + N T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQERLFQERMNQRIEELRKHAKI 295
>gi|229171909|ref|ZP_04299476.1| Foldase protein prsA 2 [Bacillus cereus MM3]
gi|228611543|gb|EEK68798.1| Foldase protein prsA 2 [Bacillus cereus MM3]
Length = 285
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 96/299 (32%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T I D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTIKKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + + G + F++ L+ + D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKEVQKAKKQYG---DQFTAVLENNRLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGRMAPEFETAAYKLKVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + +I + ++K A I
Sbjct: 208 SNPVKSPNGYHIIKLTDKKDLKPYDEVKDSIRKNLEAERIADPTFSHKLIQKELKKANI 266
>gi|146281741|ref|YP_001171894.1| NifM protein, putative a peptidyl-prolyl cis/trans isomerase
[Pseudomonas stutzeri A1501]
gi|145569946|gb|ABP79052.1| NifM protein, putative a peptidyl-prolyl cis/trans isomerase
[Pseudomonas stutzeri A1501]
Length = 292
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 90/255 (35%), Gaps = 10/255 (3%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ + E+I ++L +E E G+ V + + A LD
Sbjct: 32 SQQREQAERIIGRQLQLENAVLHSAEACGVVIPDEQVADAWAEIAARYE-DPLALHKALD 90
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
G+ + +Q LA + V++ + + + ++ + + + L R +
Sbjct: 91 DSGLDEAGLRQLLARELKVETVLQRVCAGLPEITDTDVSLYYFNHPERFVRPATRLARQI 150
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRL-RLPKDCNK-LEKFASKIHDVSIGKAQYLLESD 241
L ++ ++ +N R + RL R P+ + K + + G +
Sbjct: 151 LITVNEDFPENSRTSAWRRINLIAERLLRKPQRFAEQALKHSECPSAMEGGSLGLIRPGV 210
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL---SAQNTPTKI 297
L+PQ + L T G + C++ G ++L+ L + +
Sbjct: 211 LYPQLEACLFALRAGEIGPVVETPLGFHLL-FCEEIHPAGHLSLQEVLPHLREKLRARQY 269
Query: 298 EKHEAEYVKKLRSNA 312
E+H+ ++ L +A
Sbjct: 270 ERHQRAWLAGLLQSA 284
>gi|78185901|ref|YP_373944.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium luteolum DSM
273]
gi|78165803|gb|ABB22901.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium luteolum DSM
273]
Length = 439
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 105/313 (33%), Gaps = 20/313 (6%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KIN 69
K L + F +I ++ + + ++ ++ + EVI ++ R + ++Q K
Sbjct: 3 KALHSVFAVIAVLLIMPPTLSAAVVADKVVAVVGSEVIFKSELDSRELMTRMQYPGLKDE 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY-FFVQHARNTGL--SAEDFSSFLDK 126
L + +I + + + + ++ D N V + + +G S ED L
Sbjct: 63 ASLRSTILDNIIDQKIILTKAKIDSVSIDENAVTSMAVDRFRQLSGRFTSKEDMERRL-- 120
Query: 127 QGIGDNHFK----QYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVREYLIR 181
G + + L Q + + + F G E+ + + E +
Sbjct: 121 -GRSVDAIRRDLADELRGQQMIETLKRKKFSSVTIGYGEVMSFYRSNQASMPNLPEEVSV 179
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+ + P ++ K+I++ ++ + +L + S + G ++
Sbjct: 180 SQILKFPGVNSASKAEALKKIQEIQKKQGSGFLSFEELARRYSMDPGSAPLGGDLGFVQR 239
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+L F++ + + T+ G I + + ++ E
Sbjct: 240 GELVKPFEDAAYALKDGHVSGIVETRYGYHIIQRLGREGSSIHVRHILVAFERSGSDDGE 299
Query: 299 KHEAEYVKKLRSN 311
++ +RS
Sbjct: 300 AAA--FLDAIRSK 310
>gi|299143243|ref|ZP_07036323.1| foldase protein PrsA [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517728|gb|EFI41467.1| foldase protein PrsA [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 331
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 98/298 (32%), Gaps = 50/298 (16%)
Query: 44 TTINGEVITDGD-----ISKRIALL-------KLQKINGELEKIAVQELIVET------- 84
T+NG +T+ D ++R + L + + + K V + I E
Sbjct: 2 ATVNGTDLTEKDYVMQYAAQRNQYVLTAGSEDVLSQPSADNPKKTVDQAIKENTLKNMIQ 61
Query: 85 --LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L KQ+ KS I D + V+ G E + L+ G +K YL
Sbjct: 62 MELVKQDAAKSNIAVDQSKVDEEIKAIITQMG-GEEIYKQKLEALGSTPEFYKSYLTELQ 120
Query: 143 IWPDVVK---NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + +F ++ NK L+ TV
Sbjct: 121 LMKSYYETKIKEFEPTDEEIQKYYDKNKDNFFKAKASHILVETV------------EEAN 168
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLK-KSQNN 256
K K+ + D ++ K SK + G D+ +F +++K
Sbjct: 169 KLKKELNK-----GADFAEMAKENSKDPGSAANGGSLGEFKNGDMVAEFNDVVKILKVGE 223
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++P ++ G + + +K + + + + +Y++K++ +A I
Sbjct: 224 ISDPVKSKFGYHIVKVDEKSARTLD-----EVKEELKQQLTQAKFTDYIEKMQKDAKI 276
>gi|15805112|ref|NP_293797.1| peptidyl-prolyl cis-trans isomerase [Deinococcus radiodurans R1]
gi|6457733|gb|AAF09662.1|AE001870_1 peptidyl-prolyl cis-trans isomerse, putative, PpiC family
[Deinococcus radiodurans R1]
Length = 677
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 89/290 (30%), Gaps = 16/290 (5%)
Query: 38 MSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEK--S 93
+NG+ +T + +R + L + L A L+ + + + +
Sbjct: 61 QEGTPVIKVNGDAVTAEQLESARRASPLLADEPGSVLADDAKVYLVSQAIDRGAVLSGLK 120
Query: 94 GITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ VN + + L+ + ++ L G+ D F+ + Q +
Sbjct: 121 DVQVSRADVNAEVQKVRESNKLTDNKAWTDALQSNGLTDASFRTQVRQQLAYQRKTDELR 180
Query: 153 MLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ E+ A + K K + + R ++ +K + Q + + A+ + L
Sbjct: 181 KAVPAPTDAELKAYYDLNKSKYQAEPQIVGRQIVV---TDKAKAQSLLAQARGGADFAVL 237
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQY-LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE 268
++ G +L++ L + + T+ +
Sbjct: 238 ASANSTENKDR--GGALAPLDGNQPRPVLQAALPTAVGEAAFRLKNGGLTDVIESGGKFY 295
Query: 269 YIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + K + + K ++ LR NA + Y
Sbjct: 296 IVKVEKFLPGQPKTFEQAKTDVVSAVRQQKQNAALEKWSDDLRKNAQVEY 345
>gi|329957336|ref|ZP_08297856.1| PPIC-type PPIASE domain protein [Bacteroides clarus YIT 12056]
gi|328523049|gb|EGF50152.1| PPIC-type PPIASE domain protein [Bacteroides clarus YIT 12056]
Length = 455
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 101/300 (33%), Gaps = 39/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
+ + + Y + + + E I ++ + R+ AL + +K + +
Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + I V N + + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSEAEVIQRVDYMTNMYITNIGSREKMEEYFNKTSSQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L ++G+ +Q L + I P V+ F + IP
Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GK 233
+ ++ ++ P L+ V+KR++D + + + L + S+ +I G+
Sbjct: 176 TQVEVQ-IITQQPKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRGTAINGGE 234
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ L P F N+ + N + ++ G I + +KR G+ ++ +
Sbjct: 235 MPFTGRGYLDPAFANVAFNLQDPNKVSKIVESEFGFHIIQLMEKR---GDRIKVRHILLK 291
>gi|317179979|dbj|BAJ57765.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
F32]
Length = 299
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKV 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKIPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295
>gi|296117344|ref|ZP_06835934.1| peptidylprolyl isomerase [Gluconacetobacter hansenii ATCC 23769]
gi|295976110|gb|EFG82898.1| peptidylprolyl isomerase [Gluconacetobacter hansenii ATCC 23769]
Length = 308
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 50/266 (18%)
Query: 44 TTINGEVITDGDISKRIALL--KLQKINGELE-KIAVQELIVETLKKQEIEKSGITFDSN 100
++NG+ I DI + IA + +L+K+ + I + +L+ + + EKSG+
Sbjct: 51 ASVNGQDIRLNDIRQAIATMPDQLRKLPENVIIPILLNQLVDQKAIQIVAEKSGL-AKQP 109
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V + A L SS + G+ D+ K Y
Sbjct: 110 DVQHQME-VAAQNALQNAYLSSQVTP-GLTDDAVKAYY---------------------- 145
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE--ESRLRLPKDCNK 218
+K E R +L + Q +++ A + +L KD
Sbjct: 146 -----DKNYANKPGAEEIHARHILVPTEE---QANDIIKQLKGGANFADLATKLSKDPGS 197
Query: 219 LEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKR 276
++ + G + + D L + N+ + P TQ G I + KR
Sbjct: 198 AKQ--------NGGDLGWFKKGDMLPAFWDAASTLQPNSFSQTPVHTQYGWHVIQVLGKR 249
Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKH 300
+++ + + ++K
Sbjct: 250 TAATPTLDSMRDQIRQKLIQEGVQKA 275
>gi|229043011|ref|ZP_04190742.1| Foldase protein prsA 2 [Bacillus cereus AH676]
gi|228726351|gb|EEL77577.1| Foldase protein prsA 2 [Bacillus cereus AH676]
Length = 285
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT + K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKDNFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ G+ + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEVEKVKKQYG---DQFKKVLENYGLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+NP + G I + DK+ L +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKALKPYDEVKDSIRKNLEEERTADPVFSKKLLQEELKKANI 266
>gi|220924508|ref|YP_002499810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
nodulans ORS 2060]
gi|219949115|gb|ACL59507.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
nodulans ORS 2060]
Length = 285
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 84/282 (29%), Gaps = 50/282 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKI---AVQELIVETLKKQEIEKSGIT 96
+ +NG +T GD++ L E+ V ++ L Q EK+ +
Sbjct: 34 DTVVARVNGAPVTAGDLAVAADDPALSLPGVSDEQKKGLLVDYMVDLKLGAQAAEKAKVG 93
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ L +++ K+ + ++ +
Sbjct: 94 ESP-DFSRKLAYF--RDKLLLDEYLEREAKKAVTPEA--------------ARSLYDETV 136
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
L+ E E R +L +++ +K R++ +D
Sbjct: 137 KTLKPEE-------------EVHARHILV-------ESEAEAKKI-----AGRIKGGEDF 171
Query: 217 NKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273
K+ SK G + + + P F K ++P TQ G I +
Sbjct: 172 AKVAAETSKDPGSKAEGGDLGWFTKERMVPAFAEAAFKLDAGKVSDPVKTQFGWHVIKVE 231
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+KR + + Q K + + + KLR A I
Sbjct: 232 EKRTKP--VPSFDEMKEQIDTYLTRKTQQDIITKLREQAKIE 271
>gi|298206782|ref|YP_003714961.1| peptidyl-prolyl cis-trans isomerase [Croceibacter atlanticus
HTCC2559]
gi|83849414|gb|EAP87282.1| peptidyl-prolyl cis-trans isomerase [Croceibacter atlanticus
HTCC2559]
Length = 652
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 92/293 (31%), Gaps = 48/293 (16%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL- 80
L +FC++ + + + +I T++GE + D R+ L + E +K + L
Sbjct: 7 LFVFCLLIAGNTIAQELDKQIIMTLDGEPVYASDFV-RVYQKNLDLVQDESQKDVDEYLK 65
Query: 81 --IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
I LK +E + G + L Q FK Y
Sbjct: 66 LFIDYRLKLREAYEQG-------------------------LDTTLKFQ----REFKTY- 95
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+N F + A Q+ + TV E +L + N
Sbjct: 96 ----------RNQFARNFLTDNNVSEALVQEAYDRTVNEVNASHILIRVNQNATPEDTLK 145
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-N 255
+ + L K S+ + G+ + + F+
Sbjct: 146 AYSKIKDIREKAVNGRSFETLAKTYSEDPSAKKNGGELGWFTALKMVYAFEEQAYTVPVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + P+ T+ G + + D+R GE A++ P + + +++L
Sbjct: 206 DVSEPFRTRFGYHILKVNDRRASAGE-VEVAHIMVSPKPKDTVFNPKDRIEEL 257
>gi|322417708|ref|YP_004196931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
gi|320124095|gb|ADW11655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp. M18]
Length = 308
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 91/299 (30%), Gaps = 54/299 (18%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSR--------IRTTINGEVITDGDISKRIALLKLQKI 68
T +LI C+ + + ++ + +NG ITD D K A L Q
Sbjct: 6 TATVLLIALCVAVTGCKQQASTEAKKEGPGKGIVLAEVNGTTITDNDFYKEQAALPPQLK 65
Query: 69 NGELEKIAVQELIVET----LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+E+I L Q+ +K GI V + + +
Sbjct: 66 PMTETPEGKKEMIDTMVVRELIMQQAQKDGIDKSP-EVAAKLEDLKKRV-IVEAFLKKKI 123
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G+ + E++ NK K K + + +L
Sbjct: 124 EDSGV--------------------------VSDAELQDYYNKNKDKFKSDAQIRASHIL 157
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
++ + Q ++ A L + + G + + + P
Sbjct: 158 VK---SEAEAQEIQKQLKAGASFEELAKKHSMDGAAQ--------KGGDLGWFSKGSMIP 206
Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKH 300
+F+++ + T+ TQ G I KR G +K + A PTK ++
Sbjct: 207 EFESVAFGLKEGETSGIVKTQFGYHIIKQTGKRPAGVRSFEEVKDQIKAALLPTKQQET 265
>gi|163755249|ref|ZP_02162369.1| putative exported peptidyl-prolyl cis-trans isomerase [Kordia
algicida OT-1]
gi|161324669|gb|EDP95998.1| putative exported peptidyl-prolyl cis-trans isomerase [Kordia
algicida OT-1]
Length = 491
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 89/287 (31%), Gaps = 21/287 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITF 97
+ + +I D DI K + L+ Q ++ G + + +L+ + L + + I
Sbjct: 70 DGVAAVVGDFIILDSDIDKTLLDLRQQGVSLEGLTKCKLLGKLMEDKLYAHQAIQDSIEV 129
Query: 98 DSNT----VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
VN ++ G + F + + ++ L + +
Sbjct: 130 SPGEIRDRVNQSIEYFSQQIG-GMDKLLKFYAME--DEAALRKRL-TEITKVQFLTQRMQ 185
Query: 154 LKY-GNLEMEIPANKQ-------KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
K ++E+ +Q + E + ++ +K +QK
Sbjct: 186 SKVVRDVEITPEEVRQFFEKIPADQRPRIGVELEVSQIIIEPEPSKEAVDKVIQKLKDIK 245
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264
E + + G L +F+++ Q ++P+ T
Sbjct: 246 AEVEGGSSFGTKAILYSKDRASGRQGGLMPINKRQSLAKEFKDVAFSLQQGEISDPFETD 305
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G + + R + L + T ++E+ E + LR+
Sbjct: 306 FGWHIVMVEKVRGQERD-VRHILLIPEVTADRLEEARKE-IDTLRTR 350
>gi|110636616|ref|YP_676823.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC
33406]
gi|110279297|gb|ABG57483.1| peptidyl-prolyl cis-trans isomerase (survival protein) [Cytophaga
hutchinsonii ATCC 33406]
Length = 452
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/280 (10%), Positives = 97/280 (34%), Gaps = 23/280 (8%)
Query: 16 LTTYFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDIS------KRIALLKLQKI 68
+ ++ + F V + + + +I ++ +++ ++ R ++ +
Sbjct: 5 MLLRYLFVFFVFVTNYHFCAAQQVIDKIVAKVDNQIVLKSEVEISYLQFMRSPEAQMMQT 64
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD--- 125
+++ ++ LI+ + +T + +N + + F +
Sbjct: 65 TDDIKCRVLESLIINKMLLARAVMDSVTVEREIINQQIDR---RMDYFIQQFGTVAKLES 121
Query: 126 KQGIGDNHFKQ----YLAIQSI---WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
+ K+ + Q + D + + +++ A E
Sbjct: 122 YYNKSIDQLKEELYPQIRDQMVTQKMQDNITAGVTITPNDVKKFYKALPADSLPYFSSEV 181
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYL 237
+ ++ +P+ Q+Q ++++++ + C ++F+ + G+ +
Sbjct: 182 EVGQII-RLPEINRQDQLKFKQKLEEIRQRVASGEDFCRLAKQFSQDPVSAKNCGEIGFF 240
Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
+ +L P+++ K T+ TQ G + + ++R
Sbjct: 241 KKGELVPEYEAAASKLQPGQTSGVIETQYGYHIVQLIERR 280
>gi|329908176|ref|ZP_08274836.1| Peptidyl-prolyl cis-trans isomerase ppiD [Oxalobacteraceae
bacterium IMCC9480]
gi|327546752|gb|EGF31691.1| Peptidyl-prolyl cis-trans isomerase ppiD [Oxalobacteraceae
bacterium IMCC9480]
Length = 642
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 17/204 (8%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKL 65
+ ++ L ++ F +V + SYKS+ + + + G+ IT + D ++R + +
Sbjct: 7 THKRLMQFLLLLIIVPSFALVGLGSYKSFGDAENVIAKVGGQPITQVEYDAAQREQMARF 66
Query: 66 QKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR--- 111
+++ G E + + LI + E + ++ + A
Sbjct: 67 KQMFGAQFDPKMFDTPEARQGILDNLIAQRALSVEAARQHLSVADAALQQSITGIAGLVG 126
Query: 112 -NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ E + S L QG+ ++Q L + + + +
Sbjct: 127 PDGKFDGERYRSLLAMQGMTPAMYEQRLRQDMAVQQLNSAIQSTAFAPKTVATRLSDIND 186
Query: 171 KNITVREYLIRTVLFSIPDNKLQN 194
+ TV+E L + ++ N +
Sbjct: 187 QERTVQELLFKPADYAAKVNVTAD 210
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 66/217 (30%), Gaps = 11/217 (5%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+A ++A+ ++ DK + IQ + + + E+
Sbjct: 199 ADYAAKVNVTADMLKAYYDKNARQFE-VPEQATIQYVVLSSDALASQIAVTDQEVADFYE 257
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASK 225
+ K + +L ++ + K + +++R P D K+ K +S+
Sbjct: 258 QNKKSFGVDEQRRASHILINLKKGASATEKAAAKAKAEQVLAQVRKAPGDFAKIAKASSE 317
Query: 226 IHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G + + + P F+ + K N + + G I + +
Sbjct: 318 DQGSAPEGGDLDFFGKGAMTPPFEEAVFKLKLNEISGLVESDFGFHIIEVTAIKPASFRT 377
Query: 283 ALK------AYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ A + Q + + + + A
Sbjct: 378 LDQVKPQIVADIKRQKAAKQYSEAAESFGNTVYEQAD 414
>gi|52144275|ref|YP_082553.1| peptidylprolyl isomerase [Bacillus cereus E33L]
gi|51977744|gb|AAU19294.1| protein export protein [Bacillus cereus E33L]
Length = 287
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 101/303 (33%), Gaps = 49/303 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + +++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKDEFYEQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ + + + G + F + L +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKEVDKKYDEMKKQYG---DQFDTLLKQQGIKEGTLK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q +E +++K E +L ++
Sbjct: 104 TGVRAQLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DE 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKK 252
+K ++ + K +L K S+ G + + +F++ K
Sbjct: 144 ATAKKVKEELGQ-----GKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMVKEFEDAAYKL 198
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AEYVKKL 308
++ + P +Q G I + + ++ K + + K + E +K++
Sbjct: 199 KKDEVSEPVKSQFGYHIIKVTEIKEPEKSFEQSKVDIKKEIVQKKAQDAEFMNELMMKEI 258
Query: 309 RSN 311
+
Sbjct: 259 KKA 261
>gi|42780354|ref|NP_977601.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987]
gi|42736273|gb|AAS40209.1| protein export protein prsA [Bacillus cereus ATCC 10987]
Length = 285
Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 41/259 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ Q+
Sbjct: 7 FIITALLSILMLSACGQKNDSDTVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F + L G+ D FK +
Sbjct: 64 VITKKYK----------VSDDDVDKELQKAKNQYG---DQFKNVLKNNGLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKEKG---GDLGYFNSGRMAPEFETAAYKLKVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKR 276
+NP + G I + DK+
Sbjct: 208 SNPVASPNGYHIIKLTDKK 226
>gi|163781565|ref|ZP_02176565.1| hypothetical protein HG1285_01743 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882785|gb|EDP76289.1| hypothetical protein HG1285_01743 [Hydrogenivirga sp. 128-5-R1-1]
Length = 289
Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
R+ +NGE I + ++ ++ ++ LI + L Q + +G+
Sbjct: 35 DRVVANVNGEPILESELKVAQMFYGVKD-----RDKLIELLIQKHLIAQFLRDNGLKVPE 89
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V+ AR+ G S ++ L +G+ + +L ++ ++ M +
Sbjct: 90 GYVDTLIEDIARSNGKSVDELYRELYSKGLSPADLRSFLEVEVASTLGLREYLMSRVEVS 149
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSI 187
++EI + + ++ EY+ L ++
Sbjct: 150 DIEIEIERLRTGDV---EYVREIELLAV 174
>gi|34540238|ref|NP_904717.1| PPIC-type peptidyl-prolyl cis-trans isomerase [Porphyromonas
gingivalis W83]
gi|34396550|gb|AAQ65616.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Porphyromonas
gingivalis W83]
Length = 460
Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 89/280 (31%), Gaps = 26/280 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELE 73
+ +++ + S + + + E I DI L G +
Sbjct: 6 MRICIIMLSLLYWALPSMGQKNVIDEVVWMVGDEPILRSDIEATKRFLLSSGRPLEGNAD 65
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNY----FFVQHARNTGLSAEDFSSFLDKQGI 129
+++ V+ L + + I + VN + + + G S E + +++
Sbjct: 66 CYIPEQIAVQKLFLNQAKIDSIEVNEADVNRYVDMYLADYIQQFG-SKEKMEEYFNRK-- 122
Query: 130 GDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKN------ITVREYLI 180
++ ++ ++V + EI + T E +
Sbjct: 123 -YTQIREEQRVEVRNSEIVRMMRKKIDENVKVTPSEIRQYFASLPQDSLPYIPTTVEVQL 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLL 238
+ I L ++KR+++ + +D L + S+ + G+ ++
Sbjct: 182 LAIKPVI---SLHETDAIKKRLREFSDEINEGRRDFTTLARLYSEDSKTALQGGEYGFVS 238
Query: 239 ESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ L +F ++ + T G + + +KR
Sbjct: 239 KASLDAEFARVVFSLTDTKRVSPIIKTDDGYHIVQLIEKR 278
>gi|154494371|ref|ZP_02033691.1| hypothetical protein PARMER_03726 [Parabacteroides merdae ATCC
43184]
gi|154085815|gb|EDN84860.1| hypothetical protein PARMER_03726 [Parabacteroides merdae ATCC
43184]
Length = 454
Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 102/279 (36%), Gaps = 24/279 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIAL-LKLQKINGE 71
K+LT + + + C+V Y + I + + I DI +R+ L + Q+ +G+
Sbjct: 4 KILTVFILACLSCVV----YAQDNVIDEIVWVVGDDAILRSDIESQRLYLQNEGQRFDGD 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTV---NYFFVQHARNTGLSAEDFSSFLDKQG 128
+ +++ ++ L + + + N V ++ A N S E + G
Sbjct: 60 PYCVLPEQMAIQKLFLNQAKIDSVEVSENQVIQETDRWINFAINQMGSKEKLEEYF---G 116
Query: 129 IGDNHFKQYLAIQSIWP----DVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIR 181
+ K + I + +K + + E+ K + +
Sbjct: 117 KKISQLKDE-RKEMIMEQQTVEQMKRQLIGEIKLTPSEVRKYYSQLSKDSLPNIPTTVEV 175
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
++ P + ++ R++ + + + L + S+ + + G+ +L +
Sbjct: 176 QIITMEPKIPFEETDAIKARLRQFTDDINSGKYEFSTLARLYSEDPESAKRGGELGFLGK 235
Query: 240 SDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ L P+F N+ K + T+ G I + +KR
Sbjct: 236 TSLLPEFANVAFNLKDPKKISQIVQTEYGYHIIQLIEKR 274
>gi|331268339|ref|YP_004394831.1| parvulin-like peptidyl-prolyl isomerase [Clostridium botulinum
BKT015925]
gi|329124889|gb|AEB74834.1| parvulin-like peptidyl-prolyl isomerase [Clostridium botulinum
BKT015925]
Length = 348
Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/344 (13%), Positives = 111/344 (32%), Gaps = 43/344 (12%)
Query: 13 IKLLTTYFVLIIFCI----VPIVSYKSWAMSSRIRTTINGEVITDGDISK---------- 58
I+ L VL +F + ++ A+ + + + IT G++
Sbjct: 4 IRKLVATAVLCVFTMSAVGCSMIEKTPEAIKKTVVAKVGDKKITKGELDSHFGVKRYLDQ 63
Query: 59 -RIALLKLQKINGELEKIAVQELIV--------ETLKKQEIEKSGITFDSNT----VNYF 105
+ + + N ++++ Q I E LK QE EK + + ++
Sbjct: 64 FKQQYGENFEQNPQVKEQVKQIKIAVAKQIASQEALK-QEAEKLKLVPNDQELKKEMDKK 122
Query: 106 FVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ + + + S L G+ + F++ + I + +N+ + EI
Sbjct: 123 IQEFKKEQNIKDDKGLDSALKMSGLQKSDFEKLIKDNIIIEKL-QNELTKNIKVDDKEIE 181
Query: 165 ANKQKMKNI------TVREYLIRTVLF--SIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
K+ + + ++ P++ + + ++ ++ +
Sbjct: 182 KYYNTNKDKYPKDPKNPTKIHVAHIILQAKTPEDDAKAKDEIKSIKEELNKG-GDFAVLA 240
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
K + SK +G + L ++P TQ G I + +
Sbjct: 241 KKYSQDGSKDKGGDLGSVPTVNSGFDQDFMNAALTLKDGQISDPVKTQFGYHIIKMIKRE 300
Query: 277 DLGGEIALKAYLSAQ---NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + K E + ++ K+++ A I Y
Sbjct: 301 EAPCKTLAEVKNQVKEDILQNKKNEVIKNKF-KEIQDKANIKIY 343
>gi|154175136|ref|YP_001408066.1| trimethylamine-n-oxide reductase 1 [Campylobacter curvus 525.92]
gi|112802868|gb|EAU00212.1| trimethylamiNe-n-oxide reductase 1 (tmaoreductase 1)
(trimethylamine oxidase 1) [Campylobacter curvus 525.92]
Length = 272
Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 97/301 (32%), Gaps = 42/301 (13%)
Query: 25 FCIVPIVSYKSW-AMSSRIRTTINGEVITDGDISKRIAL----LKLQKINGELEKIAVQE 79
F I+S + ++++ + T++GE I D DIS +A K+ +K + +
Sbjct: 4 FLFPAILSLAAAISLNAAVVATVDGENINDTDISALLAAAMPGFDASKLQPNEKKRIIDD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI L ++ + SGI D + ++GI + + +
Sbjct: 64 LINRKLLLKDAKASGIEKDPEYIKAVQA-----------------AQEGIAVELYMRKIF 106
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ E+ K K+ + R + D K N Q
Sbjct: 107 DGI--------------KTSDDELRNFYNKNKDSLNQPAQARASHILVEDEKTANAIIAQ 152
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT- 257
+ + + + + + G+ + +S + F + + S+ +
Sbjct: 153 LKNLKGDALAKKFAEL-AQADSIDKG-SAAHGGELGWFGQSQMVKPFADAVFSMSKGSVS 210
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T P +Q G I D + G K + K + + LR+ A I
Sbjct: 211 TKPVKSQFGYHIILKEDSKPAGVVSFEQAKPQIEQAVKMEKFQNTIRQKGDALRAKAKIE 270
Query: 316 Y 316
Y
Sbjct: 271 Y 271
>gi|145218834|ref|YP_001129543.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris
vibrioformis DSM 265]
gi|145204998|gb|ABP36041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeovibrioides DSM 265]
Length = 439
Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 82/243 (33%), Gaps = 24/243 (9%)
Query: 47 NGEVITDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
G+VI ++ R + +LQ K + L + LI + + + ++ N +
Sbjct: 36 GGDVIFRSELDSRETMTRLQYPDLKDDRSLRSSILDGLINQKIILAKARIDSVSISENDI 95
Query: 103 ----NYFFVQHARNTGLSAE---DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-ML 154
+ Q +R + F ++ GI + + Q + + + F +
Sbjct: 96 ASSADARLRQLSRRFSSKEDMERQFGKSIE--GIRRD-LAGEIRSQQMIETLRRQKFSGV 152
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
G E+ + T+ E + + + P + +K+I+D E+ +
Sbjct: 153 TIGYGEVMSFYRDNRDAMPTLPEEVSFSQILKFPGVTRAAKASARKKIEDIEK---KFTT 209
Query: 215 DCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
++ A + D G ++ +L F++ + + T+ G
Sbjct: 210 GFLSFDELARRYSDDPGSAQLGGDLGFVQRGELVKPFEDAAYGLKDGHVSGIVETRYGFH 269
Query: 269 YIA 271
I
Sbjct: 270 IIQ 272
>gi|167765432|ref|ZP_02437545.1| hypothetical protein BACSTE_03822 [Bacteroides stercoris ATCC
43183]
gi|167697060|gb|EDS13639.1| hypothetical protein BACSTE_03822 [Bacteroides stercoris ATCC
43183]
Length = 455
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 106/306 (34%), Gaps = 42/306 (13%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISK-RI-ALLKLQK 67
+K+ + +++F + + + + + E I ++ + R+ AL + +K
Sbjct: 1 MKMCMNFKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRK 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL---- 115
+ + + +E+ V+ L + I + V N + +
Sbjct: 61 FDRDPYCVIPEEIAVQKLFLHQAALDSIEVSESEVIQRVDYMTNMYISNIGSREKMEEYF 120
Query: 116 --SAEDFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQK 169
++ L ++G+ +Q L + + P V+ F + IP
Sbjct: 121 NKTSSQIRETLRENAREGLKVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIP----- 175
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ ++ ++ P L+ V+KR++D + + + L + S+
Sbjct: 176 ------TQVEVQ-IITQQPKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRGS 228
Query: 230 SIGKAQYLLESD--LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+I + L P + N+ + N + ++ G I + +KR G+
Sbjct: 229 AIRGGEIEFSGRGMLDPAYANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR---GDRIKT 285
Query: 286 AYLSAQ 291
++ +
Sbjct: 286 RHILLK 291
>gi|308050304|ref|YP_003913870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ferrimonas balearica
DSM 9799]
gi|307632494|gb|ADN76796.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ferrimonas balearica
DSM 9799]
Length = 624
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 60/199 (30%), Gaps = 21/199 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + V++ F + + SY S + +NGE IT D+ +
Sbjct: 1 MLEKIREGSQGVAAKIILGAVILSFALTGVYSY-LGTNSEMLAAEVNGEEITRYDLDQAF 59
Query: 59 -----RIA------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R+ L L + + LI E L Q++ G+ + +
Sbjct: 60 QNEQARMRAQLGEMFDSLSADPTYMAGLRQSVLDRLIAERLIDQKVADLGLRVSDDQIQQ 119
Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ + + + L + + + L +V ++ +
Sbjct: 120 AIVAMPEFQVDGKFDNARYQAVLRQNNLSGVQLRDMLRRDMSRQQLVVGLLGSEF-VTDA 178
Query: 162 EIPANKQKMKNITVREYLI 180
E A + YL+
Sbjct: 179 EAQALTALQQQTRDLRYLL 197
>gi|188526979|ref|YP_001909666.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
Shi470]
gi|188143219|gb|ACD47636.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
Shi470]
Length = 299
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 94/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+F + + K+ ++ + ++
Sbjct: 101 N-------------------QTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR A I
Sbjct: 253 SKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQRIEELRKRAKI 295
>gi|302381139|ref|YP_003816962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
gi|302191767|gb|ADK99338.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
Length = 317
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 92/305 (30%), Gaps = 49/305 (16%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGE 71
+ + + C + R + + I D+ + L I
Sbjct: 14 SAVLALAACGRGGGDDQPPEPGDRAVARVQDQTIWASDVKREAVAQGLVGEGEPLDITSN 73
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + + E++ + L +E E+ G+ +S L ++
Sbjct: 74 LFRRVLDEVVDQKLLAREAERRGLD------------------------NSALAQR--RL 107
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
++ + + +VV + + + T E +R +L K
Sbjct: 108 EATRERILGDMLVENVVNGRINDQAVQTLYQEQLRLAR----TSEEIRVRLIL---SRTK 160
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ + + A + + ++ +F S G Y + + L+
Sbjct: 161 PEADAVIGILGQGASFEAVAQERSIDEATRF-------SGGDLGYSTADVMPQAYAGALR 213
Query: 252 KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ +T P+ T+ G + + D+R +A Q + + +++LR
Sbjct: 214 DAPAGSTVGPFQTEGGWAVLRVEDRRRESPPTLDQA--RPQIVRYLTYEGVRQLLEELRG 271
Query: 311 NAIIH 315
A +
Sbjct: 272 KAKVD 276
>gi|109946965|ref|YP_664193.1| peptidyl-prolyl cis-trans isomerase [Helicobacter acinonychis str.
Sheeba]
gi|109714186|emb|CAJ99194.1| peptidyl-prolyl cis-trans isomerase [Helicobacter acinonychis str.
Sheeba]
Length = 298
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 97/284 (34%), Gaps = 35/284 (12%)
Query: 38 MSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S+ + T++G+ IT D I +R K+ E +K V++ I L + E +
Sbjct: 37 ASAGVLATVDGKPITKSDFDAIKQRNPNFDFDKLKEEEKKALVEQAIRTVLVENEAKTEK 96
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ S +F + + + K+ ++ + +
Sbjct: 97 LD-------------------STPEFKAMI-------DAVKKQALVEFWAKKQAEQVKKV 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K EM+ N K + +E R +L D + + K+ K E++
Sbjct: 131 KIPEKEMQDFYNANKEQIFVKQEAHARHILVKSEDEAKRIISEIDKQPKTKREAKFIELA 190
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + N T P T+ G I +
Sbjct: 191 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPIKTEFGYHIIYL 248
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K + K + ++ + +++LR A I
Sbjct: 249 ISKDNPVTYTYEQAKPTIKGMLQEKLFQERMNQKIEQLRKQAKI 292
>gi|171321062|ref|ZP_02910045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MEX-5]
gi|171093676|gb|EDT38826.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MEX-5]
Length = 260
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 90/284 (31%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRSMIESFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L ++ ++++
Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILVD------------SEQQAKDLIAKIKGGAKFED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFDQV-KAQIAQQLVQQKLQAFEEG----LRQQAKIQ 260
>gi|329888709|ref|ZP_08267307.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568]
gi|328847265|gb|EGF96827.1| PPIC-type PPIASE domain protein [Brevundimonas diminuta ATCC 11568]
Length = 313
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/314 (12%), Positives = 88/314 (28%), Gaps = 49/314 (15%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL--- 65
L ++ L + + + R+ +N + D+ + L
Sbjct: 7 LHSLFLVVVAGLALGVAACGRGGDEAAPEKNDRVVARVNDRAVWASDVRREAVAQGLIGE 66
Query: 66 ---QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ EL + + E++ + L E E+ G+ A+
Sbjct: 67 DDPLDASSELFRRVMDEVVDQKLLAAEAERRGLDSSPA---------AQR---------- 107
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
++ + + VV + + A +Q++ T
Sbjct: 108 -------RLQAVRERILGDMLVEKVVSGAVSEQA---VERLYAEQQRLARATEEV----R 153
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
V + K Q + + A + + + ++ S G Y L
Sbjct: 154 VRLILAPTKEQADAVLGVLGQGAAFEAVAAQRSIDDATRY-------SGGDLGYSTLDVL 206
Query: 243 H-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
P L ++ P T+ G + + D+R +A Q +
Sbjct: 207 PGPYAAALQGQTPGAVVGPIQTETGWAVLKVEDRRVETPPTLEQA--RPQIVRYLTYEGV 264
Query: 302 AEYVKKLRSNAIIH 315
+ +++LR A +
Sbjct: 265 RQLLEQLRGQAEVE 278
>gi|170703395|ref|ZP_02894173.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria IOP40-10]
gi|170131694|gb|EDT00244.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria IOP40-10]
Length = 260
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 90/284 (31%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + F+ K E
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRSMIESFLKKNQPTE 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L ++ ++++
Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILVD------------SEQQAKDLIAKIKGGAKFED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFDQV-KAQIAQQLVQQKLQAFEEG----LRQQAKIQ 260
>gi|196230323|ref|ZP_03129186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter
flavus Ellin428]
gi|196225920|gb|EDY20427.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter
flavus Ellin428]
Length = 318
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/321 (13%), Positives = 97/321 (30%), Gaps = 22/321 (6%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDI--------SKRIALLK 64
+ +L + C + A + +N ++IT + + L+
Sbjct: 1 MRRPLLLSLTCFSLCFAPALLAKEEVLDGLAAVVNSDIITYKQVRDLTAAKEQQAHDTLQ 60
Query: 65 ---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARNTGLSAEDF 120
L K E+ AV ELI L Q+ + G + + ++ + F
Sbjct: 61 DQALTKRIKEVRTAAVNELIDRQLILQDFKSKGYSIPEHFIDDEIEALIKSRFHGNRPAF 120
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L QG+ F + I V + G E +
Sbjct: 121 LRALQAQGLSLQRFSEIQRDNII---VQEMRKQAAKGATEQPTVEKVNAAYRPSAALASS 177
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLE 239
+ + + Q++ + +L + L + S+ + G+ ++
Sbjct: 178 QPEQMRLRVIMVHGNDEGQRKFMENIRQKLTEGAEFGDLARMYSEDSSQETYGEWGWIDR 237
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPTK 296
++ + T+P + Q G Y+ C + + +
Sbjct: 238 RTINETLTKAAFALKVGETSPIIEQGGNFYLLNCAAKKGAVTRTVNELGGNTPTTLVKGE 297
Query: 297 IEKHEAEYVKKLRSNAIIHYY 317
++ +++++KLR A I +
Sbjct: 298 RQQMVSDWLQKLRRKAYIKVF 318
>gi|237747325|ref|ZP_04577805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter
formigenes HOxBLS]
gi|229378676|gb|EEO28767.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oxalobacter
formigenes HOxBLS]
Length = 259
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 93/297 (31%), Gaps = 46/297 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQEL 80
+ +S S + + +NG+ I + L L + +L
Sbjct: 5 ALVLSAISLSLISTTVFAENLAVVNGKPIPASHSDALVKELVSYGEKDTPQLRQDIKNKL 64
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
++ + QE EK + S+ V A+ + + +++L K + D K
Sbjct: 65 VLREVLVQEAEKQNV-ASSDEVKKQLE-FAKRSIMIDALRTNYLKKNPVSDKEIKA---- 118
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
E + A+ Q + +Y ++ +L N+ Q + +
Sbjct: 119 -------------------EYDRVASLQNGQ-----QYHVKHILVK---NEADAQNIINQ 151
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT- 258
K A ++ K ++ G + S+ F + ++ + T
Sbjct: 152 LNKGANFEKIAKEKSIDQG-------SAARGGDLSWASPSNYIKPFSDAMIALKKGQITK 204
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + D R + + + + E+ EY L A I
Sbjct: 205 TPVKTQFGYHIIKLVDVRKAT--LPSLNQVKPKIKTSLEERKWQEYEMNLMKQAKIE 259
>gi|210134373|ref|YP_002300812.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori P12]
gi|210132341|gb|ACJ07332.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori P12]
Length = 299
Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
S +F + + K+ ++ + ++
Sbjct: 101 D-------------------STPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKVQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|288818385|ref|YP_003432733.1| hypothetical protein HTH_1074 [Hydrogenobacter thermophilus TK-6]
gi|288787785|dbj|BAI69532.1| hypothetical protein HTH_1074 [Hydrogenobacter thermophilus TK-6]
gi|308751978|gb|ADO45461.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
Length = 276
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 100/306 (32%), Gaps = 44/306 (14%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-------KRIALLKLQKINGELEK 74
+ +F ++ ++ + + +N IT ++ + I L + + +
Sbjct: 1 MALFVLITLLMVG--FSYANVVAKVNQRSITREEVISAFNAYWRGIIHLPIAQATKRDMQ 58
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ E + + +QE +K GI + + ++ N LS
Sbjct: 59 EFLVEYVRSLIIQQEAKKMGINVKESEFKEYITKNIGNVPLS---------------ETV 103
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ + + + ++ + EI A Y + F +P L
Sbjct: 104 RELVKTEILTNKILD-RIAKDIDVSDREITAY-----------YYLNLRDFKLPAQVLVR 151
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
+ V+ + A E RL K LE + V G + L + L +
Sbjct: 152 RVLVED-LDTANEVYYRLSKGAESLE----GLRGVKEGDPMWYSIQTLPEIVKQQLYPYE 206
Query: 255 -NNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T+ P T G + + D+R + K + + K ++ ++ +K+
Sbjct: 207 VGKTSKPIDTGSGYLILKVIDRRGDGILSLEEAKPVVKEKLLKEKRQEVFKKWFQKVSKE 266
Query: 312 AIIHYY 317
+ ++
Sbjct: 267 YRVEFF 272
>gi|75758814|ref|ZP_00738928.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493718|gb|EAO56820.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 254
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 94/287 (32%), Gaps = 38/287 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYDQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + + V+ F + L + F + + +QGI + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVEDKDVDKKFDEM---KKLYGDQFDTLMKQQGIKEETIK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ Q V + + ++ A + K E +L + + +
Sbjct: 104 NSVRAQLAQEKAV------EQSITDKDVKAKFEDYKK----EIKASHILVKDEETAKKVK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F+ +K +
Sbjct: 154 DELAQ-GKSFEELAKQYSEDTGSKEK---------GGDLGFFGPGKMVKEFEEAAQKLKK 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ + P TQ G I + D KA + K + +
Sbjct: 204 DEVSEPVKTQFGYHIIKVTDNHADATFDKSKADIKKSLAQEKTQDAQ 250
>gi|86143068|ref|ZP_01061490.1| putative exported peptidyl-prolyl cis-trans isomerase
[Leeuwenhoekiella blandensis MED217]
gi|85830513|gb|EAQ48972.1| putative exported peptidyl-prolyl cis-trans isomerase
[Leeuwenhoekiella blandensis MED217]
Length = 481
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/307 (12%), Positives = 98/307 (31%), Gaps = 39/307 (12%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKK 87
++ + + + VI + DI + I LK QK+ G+ + +L+ + L
Sbjct: 48 PLTSGTTFKVDGVAAVVGEYVILESDIQQSIESLKQQKVEGQDLSTCSVMDKLMEDKLYA 107
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI---- 143
+ + + + + + F+++ G + K Y +
Sbjct: 108 HHAVIDSVMINEEQIRSY----------TQQQIDYFVNQLGSEEKVLKFYRKEKMSDLKK 157
Query: 144 ----------WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR------TVLFSI 187
++ + + + EI + ++++ + ++ + ++ +
Sbjct: 158 ELLELNRNQELAKAMQQNIVEEIEVTPEEIRSYYKELEEDGLPQFGVELEISKIQIIPEV 217
Query: 188 PDNKLQN--QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
P + Q R E K E +++ I S +
Sbjct: 218 PQEEKQKVIDQLNGYRNDILENGSSFATKAVLWSEDESTRGDGGLIRDVDRK--SQFVKE 275
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F+++ + + P+ T+ G I + R + L+ L + E +
Sbjct: 276 FRDVAFSLQEGEVSKPFETEFGYHIIKVEKIRGQKID--LRHILRIPKVTSAAEAAAKDK 333
Query: 305 VKKLRSN 311
++K+R
Sbjct: 334 IEKIRKR 340
>gi|171910875|ref|ZP_02926345.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verrucomicrobium
spinosum DSM 4136]
Length = 344
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 98/307 (31%), Gaps = 24/307 (7%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGD----ISKRIALLKLQKIN--------GELEKIAVQ 78
VS S+ I +NG+V+T + + + L+++ + +L + A+
Sbjct: 19 VSSAVAQSSNGIAVVVNGKVVTKSEVKEAVEAQEQLIRMTVRDPNEQTARLAQLREGALY 78
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQY 137
LI L E +K G + ++ R+ + E F L K G+ F++
Sbjct: 79 ALIERQLVLSEFDKLGGSIKPQYIDDDINGIVRDNFEGNREKFLMELAKTGMTLKKFREQ 138
Query: 138 LAIQSIWPDVVKNDFMLKY---GNLEMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQ 193
+ + V++ ++E K K T+ + P +
Sbjct: 139 -RQKMMVVSVLRARQTKDLAPPTPAQVEEFYRKNADKFRDKDYIKFSTITIPKYPIGNVG 197
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LK 251
QK++ + ++ D L K S+ S G + L + +
Sbjct: 198 ASPESQKKLAEEIRGKVTNGSDFANLAKTYSQDSRAESGGDWGLQERATLSREIAEVAFA 257
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAEYVKKL 308
+ G I C+ + G L+ + + ++ L
Sbjct: 258 LKVGGVSRVVEI-GGNYMIIYCEAKQPGNMEPLEKVRPQIEKFIQSEQGRNAVNRWLSGL 316
Query: 309 RSNAIIH 315
S AII
Sbjct: 317 ASKAIIQ 323
>gi|15613740|ref|NP_242043.1| protein secretion (post-translocation chaperonin) [Bacillus
halodurans C-125]
gi|46397037|sp|Q9KDN4|PRSA_BACHD RecName: Full=Foldase protein prsA; Flags: Precursor
gi|10173793|dbj|BAB04896.1| protein secretion (post-translocation chaperonin) [Bacillus
halodurans C-125]
Length = 333
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 99/298 (33%), Gaps = 31/298 (10%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L I+ + S + ++G I+D + + +LK + L+++ + LI
Sbjct: 11 LACMTILGACNNDDAGSSGQAVVEVDGHEISDAEF---VDMLKERYGEAILQELVQRHLI 67
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQ-GIGDNHFKQYLA 139
+ + ++ G+ + ++ L Q GI + K+
Sbjct: 68 SQ-------AADSVEIPQEEIDEELETFKSQIGVETDDEMLDALSNQFGITVEN-KEEFV 119
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ I P +V ++ + E ++ E +L
Sbjct: 120 NEYILPPLVLEKLAVEGVEITDEEKQAYFDENRDSLIEVEASHILVE------------D 167
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIH--DVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256
+ + RL D +L S + + G + + D+ P+F+ +
Sbjct: 168 EETAEEVLDRLEAGDDFAELASEYSVDPSAEANNGDLGFFGKGDMVPEFEEAAFNMEIDE 227
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ P + G I + D++D E L+ + + + + E ++ L + A I
Sbjct: 228 VSEPVESTYGYHIILVTDRKDSYEE--LEEKIHDTLMRER-SRTQEEVLRDLLAQADI 282
>gi|239906715|ref|YP_002953456.1| hypothetical protein DMR_20790 [Desulfovibrio magneticus RS-1]
gi|239796581|dbj|BAH75570.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 597
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 39/309 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
++ + A + +NG I ++ R + ++ + + AV++
Sbjct: 12 AAALVLSFCLWGCGRDTADEPGVVAVVNGSPIRLAELEMRNDVSRISQPAVDNP--AVED 69
Query: 80 L-----------IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L +V L QE+++ G + + A E F L ++
Sbjct: 70 LRAGLGAALADAVVARLVGQELKRLGQAPTPEELEK--AEAAVRADYPGEAFERMLLEEH 127
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
I W +++ + L+ ++ +P + + +
Sbjct: 128 IDLAR----------WREMLADRLALEKFRQDVLLPGQRVGVSEAAA--------YYKEH 169
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
V R+ R S + S+G+ + E+ L +++
Sbjct: 170 QAAFARPAMVTLRV---VSGRDAEAVKAALAAARKSGQGEASLGREAVMPEAGLPQAWRD 226
Query: 249 LLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYV 305
L+ K T P + + + ++ KAY + A+ T K+ K ++
Sbjct: 227 ALRGKKPGEATPPLAMGREHVALVLVERTPAAMPDPAKAYARVEARLTEEKLTKAFDAWL 286
Query: 306 KKLRSNAII 314
K A I
Sbjct: 287 AKALGQATI 295
>gi|319790371|ref|YP_004152004.1| SurA domain protein [Thermovibrio ammonificans HB-1]
gi|317114873|gb|ADU97363.1| SurA domain protein [Thermovibrio ammonificans HB-1]
Length = 436
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 1 MTSKVFTSLSDF---IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS 57
M SK+ +L F + ++ FV IF + S+ + S T+NG+ IT + +
Sbjct: 1 MLSKIRKNLRAFSIPLWIVAASFVGTIFLVWGRGSFSGPSGSQ--VATVNGQPITLAEFN 58
Query: 58 KRIALL--KLQKING----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+ + +L++ G ++++IA+Q L+ L + ++ G+ V
Sbjct: 59 REYKTVEDELRRKLGDNFNKLVKPNDIKRIALQRLVQRALLIELAKEEGLKVSDWAVAKA 118
Query: 106 FVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ N S + + +FL QG+ F++ + +
Sbjct: 119 IEEMPIFQENGKFSVKLYKAFLRAQGLTPQAFEETVRKDLL 159
>gi|229028936|ref|ZP_04185035.1| Foldase protein prsA 2 [Bacillus cereus AH1271]
gi|228732216|gb|EEL83099.1| Foldase protein prsA 2 [Bacillus cereus AH1271]
Length = 285
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 98/299 (32%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + +++ SS T IT GD K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLAACGQKNSSATVATATDSTITKGDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + + G + F++ L+ + D FK +
Sbjct: 64 VITKKYK----------VSDDDVDREVQKAKKQYG---DQFTAVLENNRLKDEADFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SVTEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ K + + + SK G Y + P+F+ K + +
Sbjct: 151 KEIKKKLDAGASFEELAKQESQDLLSKDKG---GDLGYFHSGTMTPEFETAAYKLNIDQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAII 314
+ P + G I + K+DL +K + +I + ++K A I
Sbjct: 208 SEPVKSPNGYHIIKLTGKKDLQPYDEVKGSIRKNLEAERIADPTFSHKLLQKELKKANI 266
>gi|212703745|ref|ZP_03311873.1| hypothetical protein DESPIG_01793 [Desulfovibrio piger ATCC 29098]
gi|212672827|gb|EEB33310.1| hypothetical protein DESPIG_01793 [Desulfovibrio piger ATCC 29098]
Length = 650
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/402 (12%), Positives = 115/402 (28%), Gaps = 95/402 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M + ++ F + ++++F + S SS + +NGE IT +
Sbjct: 1 MLDYIRSNAQSFGVKVAFAIIILVFMFWGVGSLTDGG-SSNVVAKVNGEAITAQQFEQAY 59
Query: 59 -RIALLKLQKINGELEK---------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R A ++ + + ELI L +QE + G+T ++Y +
Sbjct: 60 QRAAEYAMRNDPSLTREALVQQKLGRQVLNELISAQLIRQEAARVGMTVSPEEMHYVVSK 119
Query: 109 HA----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--------------- 149
E + ++ Q + ++Q LA + V++
Sbjct: 120 LPAFQDAQGKFDPEAYKRAIEAQRMSVAEYEQGLADSILRDKVMRTVAGSAWAAGGEARK 179
Query: 150 ------------------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
DF E E+ A + K + + ++
Sbjct: 180 YYDFLTQQRAVEYLYLPAADFAASVKPTEEELGAWYEAHKAELASQPRVEVEYVAVAPES 239
Query: 192 LQNQGFVQKRIK----DAEESRLR----------------------LPKDCNKLEKF--- 222
L V +A + R R + + K +
Sbjct: 240 LVRPESVSAEAALKWYEANKQRFRQPEQVKVAHILVPLAENAPEAAVKQAMEKAARIRSE 299
Query: 223 -----ASKIHDVS--------IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+ + D + G+ ++ F++ + P +Q G+
Sbjct: 300 AEKGDFAAVADANNGPNAAGPGGELGWIQRGQTVKPFEDAAWALQPGQISEPVRSQFGLH 359
Query: 269 YIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKL 308
I + D++D + +A + A + + + + L
Sbjct: 360 IIKMEDRKDASVQPFAEVEAEVRATLAKQEGVEKVNDVLDSL 401
>gi|332305578|ref|YP_004433429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola
agarilytica 4H-3-7+YE-5]
gi|332172907|gb|AEE22161.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 627
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 19/166 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RI------ALLKLQK 67
++I+ + V + + +N E I+ D+ + R+ A L
Sbjct: 20 LVILSFVFAGVGSYINSSADTAAAKVNDETISQADLERAYQNERGRMESQYGEAFAALTA 79
Query: 68 INGEL---EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFS 121
+ L + + LI + L +Q G+ + + + E +S
Sbjct: 80 DSAYLQQFRQGVLDRLIGDKLIEQAAVDLGLRVSDAQIKQAIVAMPEFQFDGKFDNERYS 139
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ L + G N F+ Y+ + + ++ LE A K
Sbjct: 140 AVLRQAGFQPNEFRDYMRVDMTRRQLSNALLGSEFTLLEETTQAYK 185
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 13/163 (7%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
++ E E + T E +L D++ + + + +
Sbjct: 246 GIEVSEDEAEQYYEQNIQDFRTQEERRASHILIEFGDDQQKAEQQAEDILAKINN----- 300
Query: 213 PKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVE 268
+D +L + S + G + + P F++ Q + ++ ++ G
Sbjct: 301 GEDFAELAETFSSDTFSAENGGDLDWFSMGMMDPAFEDAAFALQNVGDVSDVVESEFGFH 360
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAE-YVKKLR 309
I + D + E + A + K E+ E E Y K+LR
Sbjct: 361 IIKLTDVKP--EETSPFADVKEDVIAKLKAERAEEEFYAKQLR 401
>gi|326317152|ref|YP_004234824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323373988|gb|ADX46257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 261
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 104/309 (33%), Gaps = 57/309 (18%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + + + + A++ + +NG+ + +R+ +LK Q
Sbjct: 1 MKKKLLSGLVAAAVLGTSALPAIAQNV-AVVNGKAVP----KERVEVLKQQVERSGRPIT 55
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E+E +E+I + QE +K G+ N + + AR T L E F
Sbjct: 56 PEIEGQIKEEVIAREIFLQEAQKRGLEGSQNVKDQM--ELARQTILIRELF--------- 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIP 188
D+ + EI A K + T +EY +L
Sbjct: 105 --------------------ADYQKANPVTDAEIQAEYDKYVAANTGKEYKASHILV--- 141
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-Q 247
+ + Q + + K A+ + + + G + S +F Q
Sbjct: 142 ETEDQAKAIIASIKKGAKFEDIAKKQSKDPG-------SGARGGDLDWATPSSYVAEFTQ 194
Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
L+K + T P TQ G I + D R+ ++ + Q ++ A++ +
Sbjct: 195 ALVKLDKGKMTQTPVKTQFGWHVIRLDDVRE--AKLPKLDEVKPQIAQQLQQQKLAKFQE 252
Query: 307 KLRSNAIIH 315
LR+ A +
Sbjct: 253 DLRAKAKVE 261
>gi|255014825|ref|ZP_05286951.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_7]
Length = 454
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 95/280 (33%), Gaps = 26/280 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRI-ALLKLQKINGE 71
K+L+ +F+ C+V + I + + I DI +R+ + +++G+
Sbjct: 4 KILSVFFLACCSCLV----MAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGD 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS---SFLDKQG 128
+ +++ ++ L + + IT + N V Q ++ + G
Sbjct: 60 PYCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQW---MNMAVNQIGSREKLEEYFG 116
Query: 129 IGDNHFKQYLAIQSIWPDVVK--------NDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ K + + V + L + Q +
Sbjct: 117 KKFSQIKDE-RKEMVREQQVVQQMQHQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEV 175
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLL 238
+ V P + ++ R++D E + + L + S+ + G+ ++
Sbjct: 176 QIVTLE-PKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMS 234
Query: 239 ESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ L P+F N+ K + T+ G I + +KR
Sbjct: 235 KTQLLPEFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274
>gi|229095750|ref|ZP_04226729.1| Foldase protein prsA 2 [Bacillus cereus Rock3-29]
gi|229101848|ref|ZP_04232562.1| Foldase protein prsA 2 [Bacillus cereus Rock3-28]
gi|229114700|ref|ZP_04244114.1| Foldase protein prsA 2 [Bacillus cereus Rock1-3]
gi|228668765|gb|EEL24193.1| Foldase protein prsA 2 [Bacillus cereus Rock1-3]
gi|228681431|gb|EEL35594.1| Foldase protein prsA 2 [Bacillus cereus Rock3-28]
gi|228687583|gb|EEL41482.1| Foldase protein prsA 2 [Bacillus cereus Rock3-29]
Length = 285
Score = 62.7 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 47/301 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T IT D K+ LK + L ++ +
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTITKSDFEKQ---LKDRYGKDMLYEMMAYD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYL 138
+I + K + V+ + G + F FL+ + D FK +
Sbjct: 64 VITKKYK----------VSDDDVDNEVQKVKNQFG---DQFKGFLENNRLKDEADFKNQM 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + VK E ++ K+ E +L ++
Sbjct: 111 KFKLALHEAVKK------SVTEKDV-------KDHYKPEIKASHILV-------SDENAA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
++ K + +L K S+ + G Y + P+F+ K
Sbjct: 151 KEIKKKLDA-----GASFEELAKQESQDLLSKEKGGDLGYFNSGTMAPEFETAAYKLKVG 205
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK--HEAEYVKKLRSNAI 313
+NP + G I + DK+DL +K + +I + ++ A
Sbjct: 206 EISNPVKSTNGYHIIKLTDKKDLKPYDEVKDSIRKNLEEERIADPTFSQKLLQDELKKAN 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|288573832|ref|ZP_06392189.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569573|gb|EFC91130.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 297
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 38/305 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
L + + ++ + I + E +T D + +A + + +
Sbjct: 8 LALTLTVALSGAAFAADEKKDEILAKVGPETVTQADFDEVMAGAQPSQAAYFGTPEGKRA 67
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYL 138
L+ + + + F ++ L+ E + + + ++ +
Sbjct: 68 LVEDM-------------ADSVL---FYLWGKDNKLTETEKYKETMAE-------LEKRV 104
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
V+ + E+ K ++ I +K
Sbjct: 105 LAGMAMEKVLSG-----AKVSDEEVKKFYDDHKAAFEVPESVKASHILIQVSKDAGNDLW 159
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHD----VSIGKAQYLLESDLHPQFQNL-LKKS 253
+K K+A + R + E A + D G + E + P+F+
Sbjct: 160 KKAKKEATKIRKDILAGKVSFEDAAKRDSDCPSKSRGGDLGFFTEGQMVPEFEKAAFATK 219
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ ++P TQ G I + D +D + + + YV KL+
Sbjct: 220 IGDISDPVKTQFGYHIIKVTDHKDASEQPFDEVKDGIRQQLLQQKQRDTLSE-YVDKLKK 278
Query: 311 NAIIH 315
+
Sbjct: 279 TYKVE 283
>gi|208434128|ref|YP_002265794.1| peptidyl-prolylcis-transisomerase C [Helicobacter pylori G27]
gi|208432057|gb|ACI26928.1| peptidyl-prolylcis-transisomerase C [Helicobacter pylori G27]
Length = 299
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
S +F + + K+ ++ + ++
Sbjct: 101 D-------------------STPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|189485156|ref|YP_001956097.1| rotamase surA-like protein [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|189485167|ref|YP_001956108.1| rotamase surA-like protein [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287115|dbj|BAG13636.1| rotamase surA-like protein [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287126|dbj|BAG13647.1| rotamase surA-like protein [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 351
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 46/341 (13%), Positives = 116/341 (34%), Gaps = 40/341 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------- 65
+K + + F + + + + +NG+ I + +++K LK
Sbjct: 1 MKKFFSVLAVTFFIVGVGSIFAAPKKVDQTLAIVNGKPIFESEVNKVFNNLKSDMLASEQ 60
Query: 66 --QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
++ EL+ ++ I L K EI+K I V + + +N + E
Sbjct: 61 WSEQKINELKNRILERQIDSILLKNEIKKQKILVSRKEVLEYIKELKKNHAIDEELSKQN 120
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDV--VKNDFMLKYG---------------------NLE 160
L + + + + + + + V + + + + +
Sbjct: 121 LTYKDL-EKSVSEIIRFMKLLGKILDVNAEKITEAEIKSFYDKVIIKMKGGNPGLSHDKD 179
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ ++K + I+ + P + V + + + L++
Sbjct: 180 CLAASVADELKKVFSENVRIKQIFIKNPKGTQDAETQVVQSKVETVKKELQVKSFAEVAR 239
Query: 221 KFASKI-HDVSIGKAQ-YLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDK- 275
K++ + G ++++ DL + + + T P T G +I + +K
Sbjct: 240 KYSEDLISKSRNGDLGIFVVKGDLPLVLEKAVFSMKVGDYTKEPIKTDIGYYFIKLEEKL 299
Query: 276 --RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R + + +K Y++++ E+ Y+ LR+ A I
Sbjct: 300 PNRKIVFDGKVKDYINSRLLQFNNEQACIRYISTLRTKANI 340
>gi|313632264|gb|EFR99323.1| foldase protein PrsA [Listeria seeligeri FSL N1-067]
Length = 295
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 104/299 (34%), Gaps = 50/299 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + S + T G+V T ++ + + K + N ++++
Sbjct: 1 MKKKMILGLVMLMAMFSLAACGGGSDVVKTDAGDV-TQDELYEAM---KDKYGNEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + F + L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VTDEQVDSEFKKYKSQYG---DQFDAVLAQSGLTEETFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + ++ + + +L +
Sbjct: 104 SQLKYNM----LVQKATEANTDTSD----KALKEYYKTWQPDITVSHILVA----DEAKA 151
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-- 253
V++++KD E+ L K S D + L + +K+
Sbjct: 152 KEVEQKLKDGEK--------FADLAKEYST--DTATKDNGGKLAPFGPGKMDPAFEKAAY 201
Query: 254 ----QNNTTNPYVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + ++P TQ G I + + D + ++YL +Q T ++K +
Sbjct: 202 ALKNKGDISDPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTENMQKTLKK 260
>gi|150008994|ref|YP_001303737.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides distasonis
ATCC 8503]
gi|298375774|ref|ZP_06985730.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
3_1_19]
gi|301312044|ref|ZP_07217966.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
20_3]
gi|149937418|gb|ABR44115.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides distasonis
ATCC 8503]
gi|298266811|gb|EFI08468.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
3_1_19]
gi|300830146|gb|EFK60794.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
20_3]
Length = 454
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 95/280 (33%), Gaps = 26/280 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRI-ALLKLQKINGE 71
K+L+ +F+ CIV + I + + I DI +R+ + +++G+
Sbjct: 4 KILSVFFLACCSCIV----MAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGD 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS---SFLDKQG 128
+ +++ ++ L + + IT + N V Q ++ + G
Sbjct: 60 PYCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQW---MNMAVNQIGSREKLEEYFG 116
Query: 129 IGDNHFKQYLAIQSIWPDVVK--------NDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ K + + V + L + Q +
Sbjct: 117 KKFSQIKDE-RKEMVREQQVVQQMQHQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEV 175
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLL 238
+ V P + ++ R++D E + + L + S+ + G+ ++
Sbjct: 176 QIVTLE-PKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMS 234
Query: 239 ESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ L P+F N+ K + T+ G I + +KR
Sbjct: 235 KTQLLPEFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274
>gi|331701588|ref|YP_004398547.1| Foldase protein prsA [Lactobacillus buchneri NRRL B-30929]
gi|329128931|gb|AEB73484.1| Foldase protein prsA [Lactobacillus buchneri NRRL B-30929]
Length = 298
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 98/285 (34%), Gaps = 43/285 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+I ++S+ A S+ T NG IT+ + K +Q++I
Sbjct: 9 LIVLAGIMMSFTLAACGSKTVATTNGGKITES-------AYYSSLKSTSSGKQVLQQMI- 60
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L K ++ G + VN F ++ + G S F+S L + G+ + K +
Sbjct: 61 --LNKVLEKQYGKDVKDSQVNSEFAKYKKQYGSS---FNSVLQQNGMTASQLKDSIRSNL 115
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ VK++ + LE + K +TV + L+ +K
Sbjct: 116 LLKQAVKDNVKITDAQLETQF---KSYQPKVTVNQILVS-----------------KKST 155
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQFQN-LLKKSQN 255
+ S L+ K + L K S D + + + L F+ K
Sbjct: 156 AEKVISELKDGKSFSSLAKKYST--DTATKNKGGRIAAFDNTNTSLDANFKKAAFKLKNG 213
Query: 256 NTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
T P TQ G + I + + G ++ L Q +K+
Sbjct: 214 EYTKTPVKTQYGYQVIQMVNHPSKGTWKQHESELKDQIVTSKMSD 258
>gi|256841005|ref|ZP_05546512.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides sp. D13]
gi|256736848|gb|EEU50175.1| peptidyl-prolyl cis-trans isomerase [Parabacteroides sp. D13]
Length = 454
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 95/280 (33%), Gaps = 26/280 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRI-ALLKLQKINGE 71
K+L+ +F+ CIV + I + + I DI +R+ + +++G+
Sbjct: 4 KILSVFFLACCSCIV----MAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGD 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS---SFLDKQG 128
+ +++ ++ L + + IT + N V Q ++ + G
Sbjct: 60 PYCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQW---MNMAVNQIGSREKLEEYFG 116
Query: 129 IGDNHFKQYLAIQSIWPDVVK--------NDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ K + + V + L + Q +
Sbjct: 117 KKFSQIKDE-RKEMVREQQVVQQMQHQLIGEIKLTPSEVRKYFSQLSQDSLPNIPTTVEV 175
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLL 238
+ V P + ++ R++D E + + L + S+ + G+ ++
Sbjct: 176 QIVTLE-PKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMS 234
Query: 239 ESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ L P+F N+ K + T+ G I + +KR
Sbjct: 235 KTQLLPEFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274
>gi|229016515|ref|ZP_04173456.1| Foldase protein prsA 2 [Bacillus cereus AH1273]
gi|229022723|ref|ZP_04179247.1| Foldase protein prsA 2 [Bacillus cereus AH1272]
gi|228738535|gb|EEL89007.1| Foldase protein prsA 2 [Bacillus cereus AH1272]
gi|228744782|gb|EEL94843.1| Foldase protein prsA 2 [Bacillus cereus AH1273]
Length = 269
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 92/282 (32%), Gaps = 48/282 (17%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
S+ I TT N IT D K+ LK + L ++ Q++I + K
Sbjct: 11 SATIATTTNST-ITKSDFEKQ---LKDRYGKDMLYEMVAQDVITKKYK----------VS 56
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAIQSIWPDVVKNDFMLKYG 157
+ V+ + G + F + L+ + D F+ + + + +K
Sbjct: 57 DDAVDKEVEKAKNQYG---DQFKAALENNRLKDEKDFQDQIRFKLALNEAIKQ------S 107
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E +I K+ E +L ++ ++ K +
Sbjct: 108 VTEKDI-------KDHYKPEIKASHILV-------SDENEAKEIKKKLD-----TGASFE 148
Query: 218 KLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
+L K S + + G Y + P+F+ K +NP + G I + D
Sbjct: 149 ELAKQESQDSLSKDNGGDLGYFRAGKMTPEFEKAAYKLKPGQISNPVKSPNGYHIIKLTD 208
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
K+DL +K + +I + ++ A I
Sbjct: 209 KKDLEPYDEVKGSIRKDLEEERIADPSFGQKLLQDELKKADI 250
>gi|29349256|ref|NP_812759.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570398|ref|ZP_04847807.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6]
gi|298384796|ref|ZP_06994355.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
1_1_14]
gi|29341164|gb|AAO78953.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840779|gb|EES68861.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6]
gi|298261940|gb|EFI04805.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
1_1_14]
Length = 460
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 106/314 (33%), Gaps = 41/314 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
L++ +V+Y + + + E I D+ + R+ AL ++ G+
Sbjct: 7 FRFIVTLVLAVFANVVTYAQDNVIDEVVWVVGDEAILKSDVEEARMDALYNGRRFEGDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + + I + N + Q + +A
Sbjct: 67 CVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSKEKMEEYFNKTATQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L + G+ +Q L + P V+ F + IP
Sbjct: 127 IRETLRENARDGLTVQKMQQKLVGDIKVTPAEVRRYFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGK 233
+ ++ + P + V++R++D + + D + L + S K + G+
Sbjct: 176 TQVEVQIITLQ-PKIPIAEIEDVKRRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGE 234
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL--S 289
++ L P + N+ + + ++ G I + +KR G+ ++
Sbjct: 235 LDFMGRGMLDPAYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR---GDRVNTRHILLR 291
Query: 290 AQNTPTKIEKHEAE 303
+ + ++ + A
Sbjct: 292 PKVSEKELTEACAR 305
>gi|229165978|ref|ZP_04293743.1| Foldase protein prsA 1 [Bacillus cereus AH621]
gi|228617531|gb|EEK74591.1| Foldase protein prsA 1 [Bacillus cereus AH621]
Length = 286
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 99/299 (33%), Gaps = 50/299 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +++T GDI+K +++ G K +
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKIVTSKAGDITKEEFYNQMKTQAG---KQVLN 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + D V+ F + + G + F + + +QG+ + K +
Sbjct: 55 NMVMEKVLIK-----NYKVDEKEVDKKFDEMKKQVG---DQFDTLMKQQGLKEETVKNGV 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+E +++K E +L ++
Sbjct: 107 RASLA-------------QEQAIEKTITDKELKENYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQN 255
+K ++ + K L K S+ G Y + +F++ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEDLAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKMKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P +Q G I + D ++ +K + K + + +K+++
Sbjct: 202 EVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKTQDAQFMNDLMMKEIKKA 260
>gi|308061465|gb|ADO03353.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori Cuz20]
Length = 299
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G+ IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGKPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+F + + K+ ++ + ++
Sbjct: 101 D-------------------QTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + N T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGNYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|289435560|ref|YP_003465432.1| prsA protein, protein export protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171804|emb|CBH28350.1| prsA protein, protein export protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 295
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 104/299 (34%), Gaps = 50/299 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + S + T G+V T ++ + + K + N ++++
Sbjct: 1 MKKKMILGLVMLMAMFSLAACGGGSDVVKTDAGDV-TQDELYEAM---KDKYGNEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + F + L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VTDEQVDSEFKKYKSQYG---DQFDAVLAQSGLTEETFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + ++ + + +L +
Sbjct: 104 SQLKYNM----LVQKATEANTDTSD----KALKEYYKTWQPDITVSHILVA----DEAKA 151
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-- 253
V++++KD E+ L K S D + L + +K+
Sbjct: 152 KEVEQKLKDGEK--------FADLAKEYST--DTATKDNGGKLAPFGPGKMDPAFEKAAY 201
Query: 254 ----QNNTTNPYVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + ++P TQ G I + + D + ++YL +Q T ++K +
Sbjct: 202 ALKNKGDISDPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTENMQKTLKK 260
>gi|229010553|ref|ZP_04167755.1| Foldase protein prsA 2 [Bacillus mycoides DSM 2048]
gi|228750751|gb|EEM00575.1| Foldase protein prsA 2 [Bacillus mycoides DSM 2048]
Length = 285
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 102/302 (33%), Gaps = 44/302 (14%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+T+ + + I+ + + S+ I TT N IT D K+ LK + L ++
Sbjct: 5 STFIITALISILMLSACGQKNDSATIATTTNST-ITKSDFEKQ---LKDRYGKDTLYEMV 60
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
Q++I + K + V+ + G E F + L+ + + FK
Sbjct: 61 AQDVITKKYK----------VSDDAVDKEVEKAKDQYG---EQFKATLENNRLKDEEDFK 107
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +K E ++ K+ E +L N+
Sbjct: 108 NQIKFKLALNEAIKQ------SVTEKDV-------KDHYKPEIKASHILV-------SNE 147
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254
++ K + + + ASK + G Y + P+F+ K
Sbjct: 148 NEAKEIKKKLDTGTSFEELAKQESQDLASKDNG---GDLGYFGAGKMTPEFEKAAYKLKP 204
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNA 312
+ +NP + G I + DK+DL +K + ++ + ++ A
Sbjct: 205 DQISNPVKSPNGYHIIKLTDKKDLQPYDKVKDSIRKDLEEERLADPSFGQKLLQGELKKA 264
Query: 313 II 314
I
Sbjct: 265 DI 266
>gi|226940618|ref|YP_002795692.1| signal peptide protein [Laribacter hongkongensis HLHK9]
gi|226715545|gb|ACO74683.1| Probable signal peptide protein [Laribacter hongkongensis HLHK9]
Length = 263
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 55/303 (18%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------RIALLKLQKINGELEKIA 76
+ + ++ A ++ + +NG I ++ R +++ EL
Sbjct: 6 TVTALTFALATAGIAQAAPV-AVVNGTAIQQNELDSAVSAIVRSGGGRIKDTP-ELRNEV 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
Q+LI + QE + G+ F + + +
Sbjct: 64 KQQLINRQVILQESARRGLD-------------------KTSQFKERM-------DAVRD 97
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQN 194
L Q++ D+ K + + ++ A K+K+ +E R ++ ++ +
Sbjct: 98 DLLQQALIDDLAKQN-----PVSDAQVRAEYDKLKSALSGQKEVQARQIIV---GSEAEA 149
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KS 253
+ + K + K + K + G + + + LK
Sbjct: 150 NAVIAQLKKGGNFEAIAKQKSKDPAAKQ-------NGGDMGWGNLGVMAKPLADTLKPLG 202
Query: 254 QNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T P+ + G + + RD ++ + Q + + + LR A
Sbjct: 203 KGQYTQQPFKSDLGWHIFKVENVRD--AKVPQFDEVKPQLSRQMQGAAVEKALNDLRGKA 260
Query: 313 IIH 315
I
Sbjct: 261 KIQ 263
>gi|83719320|ref|YP_442657.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia thailandensis E264]
gi|167581594|ref|ZP_02374468.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
thailandensis TXDOH]
gi|167619710|ref|ZP_02388341.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
thailandensis Bt4]
gi|257138870|ref|ZP_05587132.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia thailandensis E264]
gi|83653145|gb|ABC37208.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
thailandensis E264]
Length = 259
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/282 (20%), Positives = 92/282 (32%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I IA L Q LE+ QEL+ + QE K GI +
Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V V ++ L +++ DF+ K +
Sbjct: 84 DVKAQIV---------VAQQTAVL--------------------RALIE-DFLKKNQPSD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A + KN REY + +L DN+ Q + + K A+ L
Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDL 161
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICDK 275
K SK + G + P+F + + T P TQ G I + D
Sbjct: 162 AKQYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQHLQKGQMTDTPVKTQFGWHIIRVDDI 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R++ +K ++ Q K++ E LR A I
Sbjct: 222 RNITPPPFEQVKQQIAQQMVQQKLQAFEEG----LRQQAKIQ 259
>gi|296121100|ref|YP_003628878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
limnophilus DSM 3776]
gi|296013440|gb|ADG66679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
limnophilus DSM 3776]
Length = 354
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 84/285 (29%), Gaps = 24/285 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA-----VQELIVETLKKQEIEKSG 94
I +NG I+ + L++ + + + A + L+ L ++ + +
Sbjct: 85 QVIVRRVNGRPISLAQVE----FLRISRGITDQDAAAAHKSLTETLVDNELIREFLARQK 140
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+T + Q + D + G+ + + + W V + +
Sbjct: 141 VTVADADIARRKEQFIQQWKNFGYDLPAITKSWGLAEPAWTADITTPLAW--YVYSQSQI 198
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ E K++ R + P Q ++++ + +
Sbjct: 199 NDAAIAAEF---KRQPARWNGTRLRARQLFLKWP--AGQPDAATREKMAEIKTKIQAGQL 253
Query: 215 DCNKLEKFASKIHDVS-IGKAQYL-LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
+ S+ S G + L + + P + G+ I
Sbjct: 254 SMEAAIRQYSESQSASQGGDVGWFGYRGRLPAAVSRAAYLQQVGEVGQPVESPLGIHLIE 313
Query: 272 ICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ D R I + + + + ++ + V K R +A I
Sbjct: 314 VTDIRPGELGIEDARKEIFDELSQSRWNEI----VTKSRESARIE 354
>gi|228938382|ref|ZP_04100992.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228971261|ref|ZP_04131889.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977871|ref|ZP_04138252.1| Foldase protein prsA 2 [Bacillus thuringiensis Bt407]
gi|228781788|gb|EEM29985.1| Foldase protein prsA 2 [Bacillus thuringiensis Bt407]
gi|228788411|gb|EEM36362.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821244|gb|EEM67259.1| Foldase protein prsA 2 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326938890|gb|AEA14786.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 285
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 43/299 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
F++ + ++S S T +T D K+ LK + L ++ Q+
Sbjct: 7 FIITALISILMLSACGQKNGSATVATATDSTVTKDDFEKQ---LKDRYGKDMLYEMMAQD 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
+I + K VN + + G + F L+ + + FK +
Sbjct: 64 VITKKYK----------VPDEEVNKEIEKVKKQYG---DQFKKVLENNRLKDEEDFKNQI 110
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + +K E ++ K+ E +L ++
Sbjct: 111 KFKLAMNEAIKK------SITEKDV-------KDHYKPEIKASHILV-------SDENEA 150
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ + + + SK G Y + P+F+ K +
Sbjct: 151 KEIKSKLDAGASFEELAKQESQDLLSKDKG---GDLGYFNSGTMAPEFETAAYKLNVGQI 207
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE--KHEAEYVKKLRSNAII 314
+NP + G I + DK+DL +K + + + +++ A I
Sbjct: 208 SNPVKSSNGYHVIKLTDKKDLKPYDEVKNSIRKNLEEERTADPAFSQKLLQEELKKANI 266
>gi|218885390|ref|YP_002434711.1| hypothetical protein DvMF_0286 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756344|gb|ACL07243.1| hypothetical protein DvMF_0286 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 415
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 29/287 (10%)
Query: 40 SRIRTTINGEVIT--DGDISKRIALLKLQKINGELEK------IAVQELIVETLKKQEIE 91
+ T+N + IT + ++ + +E+ + +LIV+ L Q +
Sbjct: 40 EGVVATVNEQPITLRTLEAVHDMSSMSWSGHAPSVEQLQAQYGAVLSDLIVQELVAQALA 99
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ I V + A +F L ++ I + ++ L + ++
Sbjct: 100 RENIAVSDGEVAEAEAEV--RGDYPAGEFEKSLVEEYIDLDLWRSRLRARIAMQKFMRLI 157
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
E+ + ++Y + R V F + ++ V K
Sbjct: 158 LRPTISIPLEEVETYYAAHR----QDYRLPRRVQFLV--VAGPDKAAVDKARA------- 204
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269
L K + V++ + + L + + L + + + G +
Sbjct: 205 -LSLGGAKPADVEAAQPSVTVRE-VKMRRDRLPALWSKELAGLAPGQASAVKQGEWGYQS 262
Query: 270 IAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAII 314
+ + AY + K+++ A +++ A I
Sbjct: 263 FLLVGEIAEKQLELSHAYPLVERVLLERKMDEAYARWMEAELRTARI 309
>gi|94986748|ref|YP_594681.1| parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis
PHE/MN1-00]
gi|94730997|emb|CAJ54360.1| Parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis
PHE/MN1-00]
Length = 305
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/309 (18%), Positives = 108/309 (34%), Gaps = 51/309 (16%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK----RIALLKLQKINGE--LEKIAVQ 78
+C+ P Y S + +NGE IT + +L L++ L++
Sbjct: 15 YCVFPFSLYAVENFPSGVMAIVNGEPITLQQVEALHDVSGNILPLREKPEVHFLQEQYGD 74
Query: 79 E---LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA----EDFSSFLDKQGIGD 131
LI+ TL QE+ K G+ V + EDF L ++ +
Sbjct: 75 SLYTLIIYTLMSQELGKLGLKVTEQDV------LLAENEIKQDYVGEDFEKSLQEEYLDI 128
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-LFSIPDN 190
++Q + + + + K+ EI EY + F IP+
Sbjct: 129 ETWRQLMKQRLTFQRFQHHILRPKFTLSSDEIE------------EYYFKHYSEFFIPEK 176
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249
+ + + + R KDC++ +D+ G + L + Q+L
Sbjct: 177 V----EIIWYQEVENSQQRKAKHKDCDR--------NDIEQGDIIRVALDRLPAKMRQDL 224
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNT--PTKIEKHEAEYV 305
+K T P + + A KR +I ++AY + K+E+ +++
Sbjct: 225 MKIKPGEYT-PRHKEGEIYQYAFLRKRYPAHQADI-IEAYSRIELILLEQKMEQAYEDWL 282
Query: 306 KKLRSNAII 314
+++ A I
Sbjct: 283 EQVIPQAKI 291
>gi|229070337|ref|ZP_04203584.1| Foldase protein prsA 1 [Bacillus cereus F65185]
gi|229080050|ref|ZP_04212578.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|228703174|gb|EEL55632.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|228712775|gb|EEL64703.1| Foldase protein prsA 1 [Bacillus cereus F65185]
Length = 303
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 278 TRELLKNADI 287
>gi|91202462|emb|CAJ72101.1| similar to peptidyl-prolyl cis-trans isomerase (survival protein
surA precursor) [Candidatus Kuenenia stuttgartiensis]
Length = 328
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 99/297 (33%), Gaps = 28/297 (9%)
Query: 42 IRTTINGEVITDGDISKR-IALLKLQKINGELEKIA----------VQELIVETLKKQEI 90
IR ++ +IT ++ KR A ++ + E+ A ++ELI L +E
Sbjct: 31 IRAVVDEAIITQDEVIKRSAAAIREARSKYSEEEFAKNIEKILEYTLEELIDRKLLVKEA 90
Query: 91 EK-SGITFD-SNTVNYFFVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+K G + V A S F + QGI K L +
Sbjct: 91 QKVFGTDISMMDEVQKELDYFLKGAVENVGSLSKFYEIAESQGINPIERKTELKEDIMID 150
Query: 146 DVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIP---DNKLQNQGFVQK 200
++K + K + + + +E +R ++ ++K + F +K
Sbjct: 151 KIIKENVNNKVKVPPKLLRRYYMENMDEFCQKKEIKLRHIMIKFSTHDNDKAKTYAFAEK 210
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
+ + ++ + G+ + L + ++++ + N +
Sbjct: 211 IM----TLLSTGEDFSSVARSYSEGPNAEKGGEWSFDEIQGLRKELRDVVNSLKDNEYSK 266
Query: 260 PYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ G + R + + + + +I + + +Y+ LR +A I
Sbjct: 267 ITESPVGYHIFKVELIRPEVVKKFEDVQDEIYKKLYREEIGRLKKKYILDLREDAFI 323
>gi|83644983|ref|YP_433418.1| parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC
2396]
gi|83633026|gb|ABC28993.1| Parvulin-like peptidyl-prolyl isomerase [Hahella chejuensis KCTC
2396]
Length = 628
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/369 (13%), Positives = 99/369 (26%), Gaps = 91/369 (24%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + I + +++ F + S ++NGE IT ++
Sbjct: 1 MLQNIRDNAQGVIAKVIVGLIVMTFAFFGVESIVGGLSGEPEVASVNGEPITKSQFERKF 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+LQ I G +L K + E I ++ Q ++G T+N F
Sbjct: 61 ERNRLQAIAGMGENYDPSKIDENKLRKTTLDEFITREVQLQAAREAGFAVSDATINNFIT 120
Query: 108 Q--HARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------- 150
Q A+ F L + G+ F++ L+ + + +
Sbjct: 121 QWPMAQKDGKYDNNQFMEALRRIGMRPMEFRKELSDELLVGQLQSGIAQTSFVIGEELNE 180
Query: 151 --------DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN------KLQNQG 196
Y ++ + + Y F +P+ +L
Sbjct: 181 LLRMERQTRSFSYYRLNAEDVAKDIEISDAEAEEYYNSNKDEFILPERIIVNYIELTRDA 240
Query: 197 FVQKRIKDAEESRLRL----------------------------PKDCNKLEKFASKIHD 228
V + EE R + K ++ K+ D
Sbjct: 241 LVGRAEVSDEEVSERYEQEKKEFLPSEQRRASHILIETSDDVSDEQALAKAQEVEQKLKD 300
Query: 229 V------------------SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269
G Y + F + L + + + P T+ G
Sbjct: 301 GGDFAALAKEFSSDLGSANDGGDLGYAQKGAFVEPFEEKLFSMNVGDISEPVKTEYGYHI 360
Query: 270 IAICDKRDL 278
I + D + +
Sbjct: 361 IKLNDVKAV 369
>gi|213865398|ref|ZP_03387517.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
Length = 105
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP--ANKQ 168
+ ++ + S L G+ N ++ + + I +V N+ + L E+ A +
Sbjct: 1 KQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQV 60
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+N E + +L +P+N +Q + A + R
Sbjct: 61 GNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQAR 103
>gi|229131944|ref|ZP_04260809.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196]
gi|228651535|gb|EEL07505.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196]
Length = 286
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 99/299 (33%), Gaps = 50/299 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +++T GDI+K +++ G K +
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKIVTSKAGDITKEEFYNQMKTQAG---KQVLN 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + D V+ F + + G + F + + +QG+ + K +
Sbjct: 55 NMVMEKVLIK-----NYKVDEKEVDKKFDEMKKQVG---DQFDTLMKQQGLKEETVKNGV 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+E +++K E +L ++
Sbjct: 107 RASLA-------------QEKAIEKTITDKELKENYKPEIKASHILVK-------DEATA 146
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQN 255
+K ++ + K L K S+ G Y + +F++ K ++
Sbjct: 147 KKVKEELGQ-----GKSFEDLAKQYSEDTGSKEKGGDLGYFTAGKMVKEFEDAAYKMKKD 201
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P +Q G I + D ++ +K + K + + +K+++
Sbjct: 202 EVSEPVKSQFGYHIIKVTDIKEQKPFDEVKGDIKKDLVQKKTQDAQFMNDLMMKEIKKA 260
>gi|229496559|ref|ZP_04390273.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas
endodontalis ATCC 35406]
gi|229316456|gb|EEN82375.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas
endodontalis ATCC 35406]
Length = 461
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 107/282 (37%), Gaps = 24/282 (8%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIALL-KLQKING 70
+ L + + I V + + + + + + E I D+ +++ LL + +++
Sbjct: 4 LNSLRPWILAIGLSCVSMCTLLAQQVIDEVVWMVGDEAILRSDVEYQKLRLLSQGVRLDA 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY--------FFVQHARNTGLSAEDFSS 122
E ++L V+ L + + IT D +N + L E F+
Sbjct: 64 NSECALPEQLAVQMLFLNQAKIDSITVDDAMINRYVEANIQGMIAEVGSKEKLE-EYFNK 122
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REY 178
L + I ++ +Q + + + ++ + EI A + ++
Sbjct: 123 SLTQ--IREDQRRQAKSGEIV--RAMQQKLVSNISVSPSEIRAYFASIPTDSLPYIPTRL 178
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQY 236
++ ++ P KL +++++++ E + L + S+ ++ G+ +
Sbjct: 179 EVQKIVRK-PIVKLSEIDRIKQKLREYSEEVNSGKTSFSTLARLYSEDTRTALNGGEYGF 237
Query: 237 LLESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKR 276
+ ++ L +F +L N + +++G + I +KR
Sbjct: 238 VAKTSLESEFARILFDMPNNKRVSPIIQSEEGYHIVQIIEKR 279
>gi|228901403|ref|ZP_04065591.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
gi|228858227|gb|EEN02699.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
Length = 303
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 107/310 (34%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDTIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLDDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K K K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKATVTEK-------------DFKDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
+ L NA I
Sbjct: 278 TRDLLKNADI 287
>gi|109899437|ref|YP_662692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas
atlantica T6c]
gi|109701718|gb|ABG41638.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas
atlantica T6c]
Length = 627
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 20/168 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RI------ALLKL 65
V++ F + SY + + + +N + I+ D+ + R+ A L
Sbjct: 19 GLVILSFVFAGVGSYINSSAETA-AAKVNDDTISQADLERAYQNERGRMESQYGEAFAAL 77
Query: 66 QKINGEL---EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAED 119
+ L + + LI + L +Q G+ + + + E
Sbjct: 78 TADSAYLQQFRQGVLDRLIGDKLLEQAAIDMGLRVSDAQIKQAIVAMPEFQFDGKFDNER 137
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+++ L + G N F+ Y+ + + ++ A K
Sbjct: 138 YTAVLRQAGFQPNEFRDYMRVDMTRRQLSNALLGSEFTLAAETTQAYK 185
>gi|192361586|ref|YP_001982980.1| peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus
Ueda107]
gi|190687751|gb|ACE85429.1| peptidyl-prolyl cis-trans isomerase D [Cellvibrio japonicus
Ueda107]
Length = 270
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 91/293 (31%), Gaps = 36/293 (12%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ + + S ++NG+ I+ + + + ++ + + A+ E +
Sbjct: 4 LLLTSACCLAALLMGCSDSGSIASVNGKGISQEEFNAYLKFKRIPEQDKARVDRALDEYV 63
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
IEK+G D+ + + R + +F+++L
Sbjct: 64 NRAALAAAIEKTG-KLDAAVIQAELEEFKRQMLIG---------------RYFEEHL-NG 106
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ V+N + G E +L I + + +
Sbjct: 107 VVDDAAVRNYYAEHQGQYE--------------SSRVHAAHILVRIDPTMGETERQAKLS 152
Query: 202 IKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
SRL+ +D L K S K+ G +L E + P+F + L +
Sbjct: 153 TAHEIYSRLQKGEDFADLAKSYSEDKVSGEKGGDLGWLAEGAVDPEFSKKLFSMKPGEIS 212
Query: 259 NPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLR 309
P +T G + + + +++ + Q V ++
Sbjct: 213 EPLITPFGFHVVKMLEGPQTIKRSLESVEGEIRYQLRNQAKATETERLVNTVK 265
>gi|308063037|gb|ADO04924.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori Sat464]
Length = 299
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 95/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+F + + K+ ++ + ++
Sbjct: 101 D-------------------QTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|158520285|ref|YP_001528155.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus
oleovorans Hxd3]
gi|158509111|gb|ABW66078.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfococcus
oleovorans Hxd3]
Length = 631
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/384 (10%), Positives = 100/384 (26%), Gaps = 97/384 (25%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKING- 70
++ L+I + + T+N E++T + +R+ Q+ G
Sbjct: 13 IIKGVLSLVILAFIFLGIGNFREQQEVTAATVNEEIVTGREFQYTYQRLLDTYRQQFGGA 72
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---------------- 105
L++ A+ +LI E + Q+ +K G+ + +
Sbjct: 73 LNDDLLKMLNLKEQAMNQLISEKIILQQADKLGLNVSDSELAATISSIPAFQNNGRFDKT 132
Query: 106 -FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI--------WPDVVKNDFMLKY 156
+ + ++ ++A F KQG+ + + + + W D +
Sbjct: 133 RYNRLLQSNRMTAAAFEQS-QKQGLLVDKLRTLITDSVLVSDNEARQWFDWENARVKITA 191
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK------------------------- 191
E + + Y + P+ +
Sbjct: 192 AVFAAEGRTDVDPAEAAVAAYYEEHKDQYKTPEKRKITYVRVAPARYLSEVKVTEEEIAD 251
Query: 192 ----------------------LQNQGFVQKRIKDAEESRLRL--------PKDCNKLEK 221
Q + R+++A + + +
Sbjct: 252 FYQANQDFYWNEETVEARHILISLEQDADEARVEEARQKAADIYVMVTDGGKDFAETARQ 311
Query: 222 FASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
++ G D+ P + + + P +Q G I + ++
Sbjct: 312 YSEGPSAGEGGYLGAFTREDMVAPFSEKAFSMAPGEISEPVRSQFGWHIIKV--EKVNAA 369
Query: 281 EIALKAYLSAQNTPTKIEKHEAEY 304
+ A +++ EY
Sbjct: 370 FTTPLDEVRADIEKQLLDQKAGEY 393
>gi|119355885|ref|YP_910529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides DSM 266]
gi|119353234|gb|ABL64105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides DSM 266]
Length = 438
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 99/281 (35%), Gaps = 23/281 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KIN 69
K+LT +++ + ++ RI + EVI +I R + +Q + +
Sbjct: 3 KMLTAAVFVMLVAFSFTLGNLHADVADRIVAVVGNEVILKSEIDDRALMTVMQYPETQKD 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS---SFLDK 126
L++ + +I + + + D +T++ + + A F+ + +K
Sbjct: 63 TRLKEKILAGIIDQKVILVKARIDSTQVDESTLDALTNE---RLKMLASRFASKEAMEEK 119
Query: 127 QGIGDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEI----PANKQKMKNITVREYL 179
G +Q + + ++ + + E +KQ++ ++ L
Sbjct: 120 FGKSMGVIRQEIRNELKDQQLIETLRKKQLAGITVTHEETVDFYRNHKQQLPQVSELVGL 179
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+ + + ++ Q +I AE L+ D + S+ + G Y+
Sbjct: 180 SQILKYPDLPQGSKDAALAQMKIVQAE---LKAGADFAATARKYSQDPGSAKLGGDLGYV 236
Query: 238 LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ +L F++ ++ T+ G I +K+
Sbjct: 237 QKGELVRSFEDAAFLLKDGKISDIVETRYGYHIIQRLEKKP 277
>gi|299537572|ref|ZP_07050865.1| foldase protein prsA 1 precursor [Lysinibacillus fusiformis ZC1]
gi|298726941|gb|EFI67523.1| foldase protein prsA 1 precursor [Lysinibacillus fusiformis ZC1]
Length = 326
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 90/267 (33%), Gaps = 41/267 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T L + V + S S I T+ G+ I+ D +++ L
Sbjct: 3 KTVLSLTLAASVLALGACSGGDSKAIVTSKVGD-ISVADFNEKAKALT--------GSYV 53
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q+++ E + +K + + A G + F+ L + G+ + FK
Sbjct: 54 MQQMVTEKV---LADKY--EVTDKEIKEAYDTTASQFG---DGFTQALAESGLTEQGFKD 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
L +Q + +K+ + + + E R +L + ++ +
Sbjct: 106 SLRVQLLQEKALKDQAIKEEDVKKYYEQMK---------TELNGRHILVA---DEKTAKE 153
Query: 197 FVQKRIKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
++K A E+ D +K G+ + + +F + +
Sbjct: 154 VIEKIKGGAKFEDVAKEYSTDTGSAQK---------GGELGWFSVGSMVDEFNDAAYALE 204
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGG 280
N + P + G I I DKRD+ G
Sbjct: 205 LNTLSEPVKSSFGYHVIEITDKRDVKG 231
>gi|167893828|ref|ZP_02481230.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
pseudomallei 7894]
gi|167918548|ref|ZP_02505639.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
pseudomallei BCC215]
Length = 259
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 92/282 (32%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I IA L Q LE+ QEL+ + QE K GI +
Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V V ++ L +++ DF+ K +
Sbjct: 84 DVKAQIV---------VAQQTAVL--------------------RALIE-DFLKKNQPSD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A + KN REY + +L DN+ Q + + K A+ L
Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDL 161
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDK 275
K SK + G + P+F ++ Q T P TQ G I + D
Sbjct: 162 AKQYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDTPVKTQFGWHIIRVDDV 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + +K ++ Q K++ E LR A I
Sbjct: 222 RSITPPPFEQVKQQIAQQMVQQKLQAFEES----LRQQAKIQ 259
>gi|301059212|ref|ZP_07200150.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2]
gi|300446702|gb|EFK10529.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2]
Length = 343
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 19/277 (6%)
Query: 42 IRTTINGEVITDGDISKRIALLKL-----QKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + + +T + + + L K ++ + +I L + ++ GI
Sbjct: 61 VVLVVGDQQLTADVLKQNLLLASEDLPIPAKETENIKTALLDNIIDRYLILEYAKQHGIV 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ + G S F L ++ + + + Q + V+ +
Sbjct: 121 VSEKEFQARLIDIKK--GYSESLFEEMLLRKWGDPDVWMKRFKEQIVIEKVINAVTVHME 178
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E+ A + N IR K N+ + + R ++ S R
Sbjct: 179 PPDYKEMKARFESNPNHYKAPEEIRFRQIFCRTKKKANELYGKIRSGESLASLAR----- 233
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
K++ V G+ ++ + L + L + + + + G + D+
Sbjct: 234 ----KYSEGPEAVDGGEVGWVAKGILDESLDKMLFQMAPGDISPVTKGASGYHIFEVMDR 289
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
R G + + + + E+++ LRS
Sbjct: 290 RPGGFRAFSEIIDGIEEDLCQTRRMSFIKEWLQSLRS 326
>gi|228921530|ref|ZP_04084852.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838149|gb|EEM83468.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 293
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 10 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 65
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 66 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 112
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 113 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 156
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 157 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 207
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 208 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 267
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 268 TRELLKNADI 277
>gi|145588566|ref|YP_001155163.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145046972|gb|ABP33599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 279
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 109/306 (35%), Gaps = 48/306 (15%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIAL 62
+ + L + L T +L + C + +S + ++NG +IT+ + + ++A+
Sbjct: 4 LISRLKPSVAQLITSSIL-LGCFGSAFAQQSGLPINA-AASVNGAIITNDMVEQGIKVAI 61
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ QK + EL K +Q+ + L Q+ EK G+ N R L+ + S+
Sbjct: 62 SQGQKDSPELRKAVIQKFVEVMLLSQQAEKDGLANSEKA-NSQLALI-RQNYLADLELST 119
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
F+ + I V+ ++ + +L + EY I
Sbjct: 120 FMAQNPIT--------------DADVQAEYNREVSSL----------GPQGMITEYKISD 155
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESD 241
+ + A R++ + +K+ + S + G A ++
Sbjct: 156 I------------AVATEAEAQAALDRIKKGEPFDKVARSVSLGPNKAQGGAAGWVQPGQ 203
Query: 242 LHPQFQNLLKK-SQNNT-TNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTK 296
+ PQ ++L + + P Q+G + + DK + E A +A + +
Sbjct: 204 VPPQIGSVLATLGKGQVCSAPIQMQQGWYLVKVEDKKSSKPPTFEQAKQAVRAGLIQKKQ 263
Query: 297 IEKHEA 302
E
Sbjct: 264 YEFVAK 269
>gi|304382089|ref|ZP_07364600.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973]
gi|304336687|gb|EFM02912.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973]
Length = 473
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 87/279 (31%), Gaps = 23/279 (8%)
Query: 34 KSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
++ + + E I D+ ++ + K G+ + ++L V+ L +
Sbjct: 43 NPASVIDEVIWVVGDEPILKSDVEMMRQQGEAEGMKFPGDPDCSIPEQLAVQKLFLHQAA 102
Query: 92 KSGITFDSNTVNYFFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
I+ +N + S E + + +Q L ++
Sbjct: 103 LDSISVTETEINQSIDQQINYWIQMIGSREKLEEYRKQ---SITQIRQELHDDFKNRQMI 159
Query: 149 ---KNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + E+ A + M ++ E ++ ++ P + V+
Sbjct: 160 HKMREKLVEGISVTPGEVRAYFRDMPKDSIPFVPTEVEVQ-IITRTPKIPQEEINRVKDE 218
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNT 257
++ E + L + S+ + G+ Y L P F ++
Sbjct: 219 LRQYTERVNKGETSFATLARLYSEDPGSARQGGELDYTGRGMLDPAFASVAFNLTDPKKI 278
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+ T+ G I + DKR G+ ++ + ++
Sbjct: 279 SKVVETEFGYHIIQLIDKR---GDKVKVRHILKKPVVSQ 314
>gi|228953196|ref|ZP_04115250.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228806423|gb|EEM52988.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 303
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 110/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D + K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAAVAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 278 TRELLKNADI 287
>gi|198282817|ref|YP_002219138.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218665858|ref|YP_002425014.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247338|gb|ACH82931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518071|gb|ACK78657.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 258
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 89/294 (30%), Gaps = 43/294 (14%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + VS + + T+NG I + ++ +++ + VQ L+
Sbjct: 3 LRAVILAATVSAFAIPAFAAPVATVNGAAIDNSEVQAIMSMSPALAKEPNAREQVVQNLV 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ VN+ Q A D L K+ +
Sbjct: 63 NMEV-----------LSQYAVNHKLGQTA--------DVKERLAMA-------KRQILAD 96
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ VK + + + K E+ +R +L + K
Sbjct: 97 AAVEQYVKEHPIPETDIQNAYNKFVQAMGKK----EFEVRHILVKT-------KTEADKI 145
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNP 260
+ D + + + K K G+ +++ + P F ++ + + P
Sbjct: 146 MGDLKAGQ-KFSALAEKYS--IDKASAAHGGELGWIVPGMVVPPFAQAIETAPIDKPVGP 202
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
TQ G I + R L + + + ++ A++V LRS A I
Sbjct: 203 VQTQFGYHVIEVQATRALT--PPPLSAMKDRIKTQLQQQEAAKFVSNLRSQAKI 254
>gi|226944452|ref|YP_002799525.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Azotobacter
vinelandii DJ]
gi|226719379|gb|ACO78550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Azotobacter
vinelandii DJ]
Length = 624
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/382 (14%), Positives = 116/382 (30%), Gaps = 95/382 (24%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDIS-KRIALLKLQKIN-------- 69
++ + + + +S+ +NG I + ++ +R LL+ +
Sbjct: 23 VLLALTGFDAILTSTSNSQNAAEVNGAKIGLAELNREVETQRRQLLQQLGKDFDASQLNE 82
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARN 112
G L A+ LI L Q E + F N ++ F Q
Sbjct: 83 GLLRNAALSGLIERKLLLQGAEAADFAFSQNALDQLILQTPEFQVDGRFDANRFDQVIAQ 142
Query: 113 TGLSAEDFSSFLDK-----------QGIGDNHFK---QYLA-----------------IQ 141
G S F L++ G G + ++ Q
Sbjct: 143 MGYSRPQFRQMLEQEMLIGQLRAGLAGSGFATDREIGDFVRLERQTRDFYTLTLSADPAQ 202
Query: 142 SIWPDVV--------------------------KNDFMLKYGNLEMEIPANKQKMKNITV 175
D V ++ F + + ++ A Q+
Sbjct: 203 VTVGDEVVQAYYEEHASSYMTSEQLVVEYIELKRDAFFDQVEIRDEDLQALYQREIANLA 262
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGK 233
+ +L + N ++ + ++++ + R+ +D L K S+ + G
Sbjct: 263 EQRQAAHILLEV--NDKLSEEQAKAKLEELKA-RIDKGEDFAALAKEFSQDPGSADKGGD 319
Query: 234 AQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSA 290
Y P F+ +L + ++P ++ G I + D + ++ LK L
Sbjct: 320 LGYAGPDVYDPAFEKVLYSLKEGEVSSPVRSEFGWHLIKLLDVQAPEIPSFDTLKEKLVH 379
Query: 291 QNTPTKIEKHEAEYVKKLRSNA 312
+ ++E+ E + L + A
Sbjct: 380 ELKAEQVEQAFVEASRDLENAA 401
>gi|152993388|ref|YP_001359109.1| peptidyl-prolyl cis-trans isomerase [Sulfurovum sp. NBC37-1]
gi|151425249|dbj|BAF72752.1| peptidyl-prolyl cis-trans isomerase [Sulfurovum sp. NBC37-1]
Length = 282
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/314 (18%), Positives = 103/314 (32%), Gaps = 57/314 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIALLKL 65
+K++ T V F +V +S I T+NG+ IT D +L
Sbjct: 2 VKIIKTSLVAAAFMASSLV-------ASDILATVNGKNITKQDAEAFVSATAPNAHFSQL 54
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ Q LI + L + +K GI D +F L+
Sbjct: 55 DPAQKN---MITQRLIEKVLFMELAKKEGIENDP-------------------EFKKALE 92
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
K K LA+ + + + + E + K K K I R +L
Sbjct: 93 K-------IKDELAVNLWMKKQLDS---IVISDSEAKDFYEKNKDKFIQKEMVQARHIL- 141
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ D K + + + E + + + + G+ + + P+
Sbjct: 142 -VKDEKTAKEIIKELKPLKGEALKKKFI---ELAKSKSIGPSAPKGGELGKFAKGQMVPE 197
Query: 246 FQNLL-KKSQNNTT-NPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKH 300
F + K ++ T P TQ G I + DK + + + +++ + K
Sbjct: 198 FSKAVWKLEKDQITLEPVKTQFGYHIILLEDKIEAQTVPYDKVKDQIIAS-LKQQEFAKK 256
Query: 301 EAEYVKKLRSNAII 314
A K+L+S A I
Sbjct: 257 VAAIAKELKSKAKI 270
>gi|295702743|ref|YP_003595818.1| foldase protein PrsA [Bacillus megaterium DSM 319]
gi|294800402|gb|ADF37468.1| foldase protein PrsA [Bacillus megaterium DSM 319]
Length = 307
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 100/306 (32%), Gaps = 36/306 (11%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L T ++ + + SS++ IT GD+ K++ Q
Sbjct: 4 SLVALTTAASLVALSACSGGNDASNANDSSKVIVETKAGNITQGDLYKQMKDTIGQDQFN 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + +E ++ ++ G + S + ++G
Sbjct: 64 TLVRSVTEE---------KVLSKKYKVTDKELDQQLNILREQYG---DQVDSVIKQKG-- 109
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K L + + +K + E++ ++ K + + +L
Sbjct: 110 EKEVKDMLKVDILREKAATA--GIKVSDKELKKAYDEYKAQKP---QIRASHILVK---- 160
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQN 248
++ + E++++ +D L K S + G Y E + +F+
Sbjct: 161 --------DEKTANEVEAKIKKGEDFASLAKEYSTDQQSAANGGDLGYFGEGQMVKEFEE 212
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYV 305
K + + P T+ G I + DK+ + K L Q +K+++ E +
Sbjct: 213 AAYKLKKGEVSKPIKTEYGYHIIKLVDKKKVESFEKKKPELEQQIKRSKVDQAEANKKIQ 272
Query: 306 KKLRSN 311
K+L
Sbjct: 273 KELDKA 278
>gi|228908608|ref|ZP_04072446.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
gi|228851024|gb|EEM95840.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
Length = 303
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K + + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEITKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I KN + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KNHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
+ L NA I
Sbjct: 278 TRDLLKNADI 287
>gi|312888862|ref|ZP_07748425.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mucilaginibacter
paludis DSM 18603]
gi|311298737|gb|EFQ75843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mucilaginibacter
paludis DSM 18603]
Length = 457
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 30/257 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELE-------------KIAVQELIVET-L 85
+I + +I DI + A +Q +A Q +I +
Sbjct: 26 DKIAGVVGSGIILQSDIESQYAQYLIQGNPPNPSIKCLILQQLLTQKLLAQQAVIDSVFV 85
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD-NHFKQYLAIQSIW 144
K E+ V+ + G E FL + I + + + Q +
Sbjct: 86 KDDEV--------DAEVDRRMRSMVQRAG-GEERLEQFLGRSIIQYKDELRPDIKEQRV- 135
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++ K +I + ++ Y + I ++
Sbjct: 136 AEKMRQKITEKVNVTPFDIKKYFDAIPKDSLPTYNKEVEVGEISITPKLTAEEKKQFKDK 195
Query: 205 AEESRLRLP--KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259
AE R R+ +D L + S+ S G + S +F + K +
Sbjct: 196 AESLRARVKGGEDFGNLARLYSQDPGSSPDGGDLGFADRSTFVKEFAAMAFKLKAGEISP 255
Query: 260 PYVTQKGVEYIAICDKR 276
+ T G ++ + ++R
Sbjct: 256 VFETDFGFHFLQVIERR 272
>gi|53719054|ref|YP_108040.1| putative exported isomerase [Burkholderia pseudomallei K96243]
gi|76809971|ref|YP_333855.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia pseudomallei 1710b]
gi|126452457|ref|YP_001066604.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1106a]
gi|167738143|ref|ZP_02410917.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 14]
gi|167815330|ref|ZP_02447010.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 91]
gi|167823737|ref|ZP_02455208.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 9]
gi|167845286|ref|ZP_02470794.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei B7210]
gi|167910520|ref|ZP_02497611.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 112]
gi|226197257|ref|ZP_03792834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei Pakistan 9]
gi|242315812|ref|ZP_04814828.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1106b]
gi|254189167|ref|ZP_04895678.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254198249|ref|ZP_04904671.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei S13]
gi|254259998|ref|ZP_04951052.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1710a]
gi|254297327|ref|ZP_04964780.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 406e]
gi|52209468|emb|CAH35420.1| putative exported isomerase [Burkholderia pseudomallei K96243]
gi|76579424|gb|ABA48899.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
pseudomallei 1710b]
gi|126226099|gb|ABN89639.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1106a]
gi|157807500|gb|EDO84670.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 406e]
gi|157936846|gb|EDO92516.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|169654990|gb|EDS87683.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei S13]
gi|225930636|gb|EEH26646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei Pakistan 9]
gi|242139051|gb|EES25453.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1106b]
gi|254218687|gb|EET08071.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1710a]
Length = 259
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 92/282 (32%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I IA L Q LE+ QEL+ + QE K GI +
Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V V ++ L +++ DF+ K +
Sbjct: 84 DVKAQIV---------VAQQTAVL--------------------RALIE-DFLKKNQPSD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A + KN REY + +L DN+ Q + + K A+ L
Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDL 161
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDK 275
K SK + G + P+F ++ Q T P TQ G I + D
Sbjct: 162 AKQYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDAPVKTQFGWHIIRVDDV 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + +K ++ Q K++ E LR A I
Sbjct: 222 RSITPPPFEQVKQQIAQQMVQQKLQAFEES----LRQQAKIQ 259
>gi|229056773|ref|ZP_04196175.1| Foldase protein prsA 1 [Bacillus cereus AH603]
gi|228720567|gb|EEL72131.1| Foldase protein prsA 1 [Bacillus cereus AH603]
Length = 244
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 81/248 (32%), Gaps = 36/248 (14%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ K + +++E + + D V+ F + + G + F + + +QG
Sbjct: 2 KTQAGKQVLNNMVMEKVLIK-----NYKVDDKEVDKKFDEMKKQVG---DQFDTLMKQQG 53
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ + K + +E +++K+ + +L
Sbjct: 54 LKEETVKNGVRASLA-------------QEQAIEKTITDKELKDNYKPQVKASHILVKDE 100
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ + + + K EE + +D EK G + + +F++
Sbjct: 101 ATAKKVKEELGQ-GKSFEELAKQYSEDTASKEK---------GGDLGFFEHGKMVKEFED 150
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHE---AE 303
K ++ + P TQ G I + D ++ KA L + K + E
Sbjct: 151 AAYKLKKDEVSEPVKTQFGYHIIKVTDIKEPEKSFEQSKADLKKELVAKKAQDGEFMNDL 210
Query: 304 YVKKLRSN 311
+K+++
Sbjct: 211 MMKEIKKA 218
>gi|118474611|ref|YP_891704.1| foldase protein PrsA [Campylobacter fetus subsp. fetus 82-40]
gi|118413837|gb|ABK82257.1| foldase protein PrsA [Campylobacter fetus subsp. fetus 82-40]
Length = 269
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/308 (17%), Positives = 104/308 (33%), Gaps = 59/308 (19%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIV 82
I+ + + ++++ + T+NG+ ITD D++ + + + +++K + +I
Sbjct: 4 GVILALSLAAAVSLNAAVLATVNGQNITDEDLAPVLGPHGSETSNVPADMKKNLLDRVIE 63
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L + +K GI D +F + +AI
Sbjct: 64 RKLMLDQAKKDGIEKDD-------------------EFKKV-------VKELEDNVAINI 97
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
W ++ + A K K Y F +P V+
Sbjct: 98 -W--------------MKKQFDAIKVDEKKAKDF-YEQNKDKFVVPAQAKAKHILVETEK 141
Query: 203 KDAEESRLRLPKDCNKLEKFASKI---------HDVSIGKAQYLLESDLHPQF-QNLLKK 252
+ A+ + L+K S+I V+ G+ + ES + F +
Sbjct: 142 EAADIIKSLNGLKGAALDKKFSEIAKEKSIDKSSAVNGGELGWFGESQMVASFSKAAFGL 201
Query: 253 SQNNTTN-PYVTQKGVEYI---AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ TN P ++ G I + DK +G + A KA + Q + + V L
Sbjct: 202 KKGEITNKPVKSEFGYHVILKEDMKDKSAVGFDKA-KANIENQMKSEEFRTVMQKKVSDL 260
Query: 309 RSNAIIHY 316
+ +A I Y
Sbjct: 261 KKDAKIEY 268
>gi|148655481|ref|YP_001275686.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus sp.
RS-1]
gi|148567591|gb|ABQ89736.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseiflexus sp.
RS-1]
Length = 337
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 86/296 (29%), Gaps = 40/296 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQEIE 91
++ +T ++ +RI ++ ++E+ V + I + L
Sbjct: 26 VARVDNVTLTRQELDQRIDRIEKGFAQQAGMGFPLPSRLDIERELVSQFIDQQLTLGLAR 85
Query: 92 KSGITFDSNTVNYFFVQHARN----TGLSAEDFSS-FLDKQGIGDNHFKQYLAIQSIWPD 146
+ GIT VN + + G+S E L G F+ ++
Sbjct: 86 QRGITVSDGEVNDQIERFRQQIQMGGGMSLEQAIQEQLGLPGEASPEFRLFVTYFLARQK 145
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + ++ ++ I V + +L + D Q
Sbjct: 146 L--GETLVSENDIRQRITDEVMADTQRMVDVATVAHILVATEDEAKQVIE---------- 193
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTT-NPY 261
RL + L K S+ + G + + P+F + TT P
Sbjct: 194 --RLDKGEAFADLAKELSQDPGSANNGGVYENIQRGQFVPEFDKAMFEDLQPGETTKTPV 251
Query: 262 VTQKGVEYIAICDKRDLGGEIALKA-----YLSAQNTPTKIEKHEAEYVKKLRSNA 312
TQ G I + + A AQ P + + ++ R A
Sbjct: 252 QTQFGWHVIRLVSRGQAPALDPADAQAVIEQRVAQELPFEQQTAFERLLQSEREKA 307
>gi|229179148|ref|ZP_04306503.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228604303|gb|EEK61769.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
Length = 285
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 2 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 58 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 105 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 149 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 199
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 200 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 259
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 260 TRELLKNADI 269
>gi|289208891|ref|YP_003460957.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp.
K90mix]
gi|288944522|gb|ADC72221.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp.
K90mix]
Length = 289
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 51/278 (18%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKI--AVQELIVETLKKQEIEKSGITFDSN 100
+N IT D+ + + G + + E+I L +QE K G+ D
Sbjct: 51 VAIVNDRAITRADL---FTYAGMDEDPGLATQGEGVLDEVISLELLRQEALKRGLG-DDP 106
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ + L + + E
Sbjct: 107 EIQRIL-------------------------KMVETNLLASMLME-----RIAEELEISE 136
Query: 161 MEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
++ A +++++ + EY R +L +++ + + + A+ + L +
Sbjct: 137 EDVEAEYERQVEYLRGTEYRARHILV---EDEDSARELLAQLDDGADFAELAEEHSIDPG 193
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKRD 277
G + + P+F + TT P +Q G I + D R+
Sbjct: 194 -------SAARGGDLGWFTPDGMVPEFAAATEALEPGETTDAPVQSQFGWHLIRLDDTRE 246
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ E+ + A+ + E ++ LR+ A I
Sbjct: 247 V--EVPPLDEVRAEIIEILESRAIQEKLEALRAEATIE 282
>gi|251772782|gb|EES53344.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum
ferrodiazotrophum]
Length = 307
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/305 (8%), Positives = 79/305 (25%), Gaps = 36/305 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-- 72
+ + + IF + + A T+ G+ ++ D+ + + + +
Sbjct: 1 MTARFRLAFIFLFLAASCHAKEAPLEGAVATLAGQPVSVADLRETARFMGVGGVADRPFT 60
Query: 73 ------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
K +E I + L + ++ GI+ + + +
Sbjct: 61 TWTPAFAKTVFEETIYDRLLAEAAQRQGISVSPKEIQEEKKRI-----------LAISAP 109
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+G + ++V+ + ++ + + + EY R +
Sbjct: 110 EGGRPVELSE---------ELVRKKLL--LAKAAEQVAPAPEISRKAALAEYNRRKGHYE 158
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--DVSIGKAQYLLESDLHP 244
P+ L V+ + + A + G ++
Sbjct: 159 TPERALVRDIVVRSEDEGKAILTALAAGNSFSALARAKSLSPEGAKGGLLPPYALGEMPA 218
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHE 301
F + + G + + ++ + + +
Sbjct: 219 LFALAFSMKPGEVSPLLSSPYGYHILKLVKILP-SADLPFRKVRDRIERHLREKAQREAL 277
Query: 302 AEYVK 306
A+++
Sbjct: 278 AQWLA 282
>gi|254456744|ref|ZP_05070172.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
gi|207085536|gb|EDZ62820.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
Length = 278
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
IF + + S + I + G IT DI K + L K+ K A LI +
Sbjct: 4 IFLTIMLALTLSAEIVDGIAVIVKGSAITLYDIKKEMQLSKID------AKSATDALIRK 57
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
L+ QEI++ I+ S V + A LS +F +
Sbjct: 58 ALENQEIDERKISVSSGEVYDDIKKTAERNKLSVSEFYEAVRNS 101
>gi|78357081|ref|YP_388530.1| hypothetical protein Dde_2038 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219486|gb|ABB38835.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 335
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 97/310 (31%), Gaps = 28/310 (9%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI- 75
V+ I+ K + T+NG + ++ R L L + +
Sbjct: 4 QIAAVVAACVIMAAAGCKDDVEQQGVVATVNGSPVYLQELEARYDLDHLSWSGAMVPSVD 63
Query: 76 --------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
A+ LIV+ L +Q++EKSG+ V + +F L +
Sbjct: 64 QLRKDYGSALAGLIVQRLVEQDLEKSGLDVTDEEVLKAEEEV--RADYPPGEFEKVLVED 121
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
I ++ L E + K YL + F
Sbjct: 122 YIDLATWRYMLRQHLQREKFRSEILRPAISLSFEE---AEDYYKAHLSDFYLPERINFL- 177
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
++G V+K E + R + +S+ + + E +H ++
Sbjct: 178 -YISGPDRGTVEKARDLLTEGKDR--------AEVLGSFSQLSVREL-KMREDRIHGTWK 227
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEY 304
LL K + + + G E + +AY + K+++ A++
Sbjct: 228 QLLAKLEDGQASPVLNGEAGYEAFIMLGLLPEKVLGPSQAYPIIERLLIEEKMQQVYAQW 287
Query: 305 VKKLRSNAII 314
++K +A +
Sbjct: 288 LEKRLESAEV 297
>gi|332297435|ref|YP_004439357.1| basic membrane protein [Treponema brennaborense DSM 12168]
gi|332180538|gb|AEE16226.1| basic membrane protein [Treponema brennaborense DSM 12168]
Length = 360
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 98/297 (32%), Gaps = 33/297 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+K L F++ I + + + ++ E IT + R+ KLQ
Sbjct: 1 MKRLVVSFIVCICGAAAVFAQADLQPLANVKLY-QPESITLKQLKNRVESYKLQSGVASF 59
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-----------TGLSA 117
+ +K + +I E L Q K+GI +N +F+ + L
Sbjct: 60 TVDQKKEILNGMIDEKLVVQAAMKNGINITDAQINDYFLSYMSQQIGQTVTEVQLAKLVK 119
Query: 118 EDFSSFLD-----KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG---NLEMEIPANKQK 169
E LD + G+G +K YL Q I + + + + EI A +
Sbjct: 120 EQTGMSLDDYIKGQVGMGLAEYKSYLKNQLIAQQYILSLKQSEVQKIAPTDEEIRAFYEM 179
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
K+ V+ +++ L +P N + +K ++ + + +K++
Sbjct: 180 SKSSFVQSDVLKLFLVVVPKNDD-EKAARKKITGMFDDVKSKKLTA-DKIKALQQSDSSF 237
Query: 230 SIGKAQYLLESDLHPQFQ-------NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
G + Q L K ++ T ++ + +K D
Sbjct: 238 QAGDLYVSKTAQAAQQLGINYQGLLELFTKDTGFISDLNETDTDFQFYIVRNKYDAK 294
>gi|262383884|ref|ZP_06077020.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_33B]
gi|262294782|gb|EEY82714.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_33B]
Length = 454
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 99/277 (35%), Gaps = 20/277 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRI-ALLKLQKINGE 71
K+L+ +F+ CIV + I + + I DI +R+ + +++G+
Sbjct: 4 KILSVFFLACCSCIV----MAQDNVIDEIVWVVGDDAILRSDIETQRLYNQNEGVRLDGD 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSSFLDKQ- 127
+ +++ ++ L + + IT + N V A N S E + K+
Sbjct: 60 PYCVIPEQMAIQKLYLNQAKIDSITVNENQVIQSVDQWMNMAVNQIGSREKLEEYFGKKF 119
Query: 128 ----GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
++ +Q + ++ + L + Q ++ V
Sbjct: 120 SQIKDERKEAMREQQVVQQMQQQLI-GEIKLTPSEVRKYFSQLSQDSLPNIPTTVEVQIV 178
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
P + ++ R++D E + + L + S+ + G+ ++ ++
Sbjct: 179 TLE-PKIPFEETDAIKARLRDFTEQVNSGKMEFSTLARLYSEDPGSASRGGELGFMSKTQ 237
Query: 242 LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
L P+F N+ K + T+ G I + +KR
Sbjct: 238 LLPEFANVAFNLKDPKRVSQIVQTEYGYHIIQLIEKR 274
>gi|229128201|ref|ZP_04257182.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
gi|228655060|gb|EEL10917.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
Length = 303
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLHDKYK----------VTDEEVTKQLEELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
+ L NA I
Sbjct: 278 TRDLLKNADI 287
>gi|53723651|ref|YP_103096.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia mallei ATCC 23344]
gi|121601461|ref|YP_993254.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia mallei SAVP1]
gi|124384406|ref|YP_001029302.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia mallei NCTC 10229]
gi|126440095|ref|YP_001059336.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 668]
gi|126450119|ref|YP_001080762.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Burkholderia mallei NCTC 10247]
gi|134277391|ref|ZP_01764106.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 305]
gi|166998724|ref|ZP_02264578.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei PRL-20]
gi|167719141|ref|ZP_02402377.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
pseudomallei DM98]
gi|167902279|ref|ZP_02489484.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
pseudomallei NCTC 13177]
gi|217421758|ref|ZP_03453262.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 576]
gi|237812660|ref|YP_002897111.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei MSHR346]
gi|238562190|ref|ZP_00440767.2| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei GB8 horse 4]
gi|254177766|ref|ZP_04884421.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei ATCC 10399]
gi|254179444|ref|ZP_04886043.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1655]
gi|254200043|ref|ZP_04906409.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei FMH]
gi|254206378|ref|ZP_04912730.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei JHU]
gi|254358208|ref|ZP_04974481.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei 2002721280]
gi|52427074|gb|AAU47667.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei ATCC 23344]
gi|121230271|gb|ABM52789.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei SAVP1]
gi|124292426|gb|ABN01695.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei NCTC 10229]
gi|126219588|gb|ABN83094.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 668]
gi|126242989|gb|ABO06082.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei NCTC 10247]
gi|134251041|gb|EBA51120.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 305]
gi|147749639|gb|EDK56713.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei FMH]
gi|147753821|gb|EDK60886.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei JHU]
gi|148027335|gb|EDK85356.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei 2002721280]
gi|160698805|gb|EDP88775.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei ATCC 10399]
gi|184209984|gb|EDU07027.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 1655]
gi|217395500|gb|EEC35518.1| peptidyl-prolyl cis-trans isomerase family protein [Burkholderia
pseudomallei 576]
gi|237503368|gb|ACQ95686.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei MSHR346]
gi|238523045|gb|EEP86486.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei GB8 horse 4]
gi|243065078|gb|EES47264.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
mallei PRL-20]
Length = 259
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 92/282 (32%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I IA L Q LE+ QEL+ + QE K GI +
Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V V ++ L +++ DF+ K +
Sbjct: 84 DVKAQIV---------VAQQTAVL--------------------RALIE-DFLKKNQPSD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A + KN REY + +L DN+ Q + + K A+ L
Sbjct: 114 TELKARYDDLVKNAGGREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDL 161
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDK 275
K SK + G + P+F ++ Q T P TQ G I + D
Sbjct: 162 AKQYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDTPVKTQFGWHIIRVDDV 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + +K ++ Q K++ E LR A I
Sbjct: 222 RSITPPPFEQVKQQIAQQMVQQKLQAFEES----LRQQAKIQ 259
>gi|99082756|ref|YP_614910.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040]
gi|99039036|gb|ABF65648.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ruegeria sp. TM1040]
Length = 283
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 99/304 (32%), Gaps = 54/304 (17%)
Query: 18 TYFVLIIFCIVPIVSYKSWAM--SSRIRTTINGEVITDGD-ISKRIAL-LKLQKINGELE 73
T+ ++F ++ ++A ++ + T+NGE IT G+ I R L + Q + +L
Sbjct: 6 TFLQGVVFATAFGLAAPAFAELNANTVVATVNGEDITVGNMIVARAKLPAQYQSLPDDLL 65
Query: 74 KIA-VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
A + +LI +T+ KQ++ LS E L +
Sbjct: 66 FKALLDQLIQQTVLKQQLH---------------GDIPEYVRLSVEHEQRSLLASDV-IE 109
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ + D + G E+ +L + L
Sbjct: 110 AVMEGAQTEDAIRDAYDARYSSDDG-----------------GDEFNASHILLESEEAAL 152
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLL- 250
+ + + + D L K +S + G + + P+F+ +
Sbjct: 153 EIKSQLDE------------GADFAALAKESSTGPSGPNGGALGWFENGRMVPEFEAAIS 200
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P TQ G I + D+R L E + + ++ + + +L +
Sbjct: 201 DMRSGEVSGPVQTQFGWHIIKLNDRRKL--EAPEYEDVRDEIAQELAQQAVEDRISQLTA 258
Query: 311 NAII 314
A I
Sbjct: 259 TATI 262
>gi|317010455|gb|ADU84202.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
SouthAfrica7]
Length = 299
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 95/284 (33%), Gaps = 35/284 (12%)
Query: 38 MSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S+ + T++G IT D I +R K+ + ++ +++ I L + E +
Sbjct: 39 ASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAK--- 95
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A + E F + + K+ ++ + +
Sbjct: 96 ---------------AEKLDQTPE-FKAMM-------EAVKRQALVEFWAKKQAEEVKKI 132
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 133 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELA 192
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + T P T+ G I +
Sbjct: 193 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGTYTKTPVKTEFGYHIIYL 250
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 251 ISKDSPITYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 294
>gi|212636023|ref|YP_002312548.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
piezotolerans WP3]
gi|212557507|gb|ACJ29961.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
piezotolerans WP3]
Length = 619
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/400 (14%), Positives = 115/400 (28%), Gaps = 93/400 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSY-LGSSTEVAAATVNGEEISNSALEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R L + +++ ++ L+ E L Q + G+ +
Sbjct: 60 ENERGRLEQQLGDMFSTLSADDNYMQSVKQSVLERLVAEKLLDQNAAELGLRVSDEQIRT 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV------------K 149
+Q + + + + L + G N F+ + + +V +
Sbjct: 120 AIMQEPAFQTDGRFDNDRYQAILRQLGYQANSFRDMMRVDMTRRQLVATLVGSEFVLPGE 179
Query: 150 NDFMLKYGNLEMEIP--------------------------------------------A 165
+++ +I
Sbjct: 180 AEYLANIQGQTRDINYLVIDSTPFLAAASVTDEQIQTYYNSNLGQFVRPEIVSLNYIELD 239
Query: 166 NKQKMKNITVRE------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
KQ ++TV E Y V + P+ +L + +AEE + +
Sbjct: 240 AKQLAADVTVTEADAKTYYDENKVQYLQPEKRLAAHILIGLDEDNAEEKAEAIYQKLQNG 299
Query: 220 EKFASKIHDVS--------IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270
E FA+ S G+ + + P+F L + + +N T G I
Sbjct: 300 EDFAALAKAESQDTFSGEQGGQLDWFEAGVMEPEFDAALFALDKGSYSNVVKTNFGYHII 359
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
D G E A + + E+ + +L+
Sbjct: 360 KALDI-QAGAEAPF-ADVKEKIIAQLQEQQAVDKFYELQQ 397
>gi|254778889|ref|YP_003056994.1| Peptidyl-prolyl cis-trans isomerase C (PPIase) (Rotamase); putative
signal peptide [Helicobacter pylori B38]
gi|254000800|emb|CAX28724.1| Peptidyl-prolyl cis-trans isomerase C (PPIase) (Rotamase); putative
signal peptide [Helicobacter pylori B38]
Length = 299
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAK---- 96
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
A + E F + + K+ ++ + ++
Sbjct: 97 --------------AEKLDQTPE-FKAMM-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|228939979|ref|ZP_04102553.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972874|ref|ZP_04133469.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979455|ref|ZP_04139787.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228780273|gb|EEM28508.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228786747|gb|EEM34731.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819591|gb|EEM65642.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 303
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
+ L NA I
Sbjct: 278 TRDLLKNADI 287
>gi|254451174|ref|ZP_05064611.1| foldase protein PrsA [Octadecabacter antarcticus 238]
gi|198265580|gb|EDY89850.1| foldase protein PrsA [Octadecabacter antarcticus 238]
Length = 284
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 88/310 (28%), Gaps = 61/310 (19%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI--------SKRIALLKL 65
KLL + + + + + ++NG IT G + + L
Sbjct: 6 KLLASAALFTFTASFAYGDAHTDMTAETVVASVNGSDITLGQLVMLRSQLPEQYQQLADD 65
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
NG +E++ Q+L+ +TL+ E ++ GI +
Sbjct: 66 VVFNGLIEQLVNQQLLGDTLEV-EPKRVGIAIANE------------------------- 99
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+ +VV +++ + + + EY +L
Sbjct: 100 -----VRSLRA--------GEVVNTFTSAPVDEADLQATYDARFADIVPEAEYNASHILV 146
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ ++ + + ++ S G + + P
Sbjct: 147 ETEEEAIEIGTMIDD-----------GADFAETAVEKSTGPSGPSGGDLGWFGLGMMVPA 195
Query: 246 FQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F+ +L + P TQ G + + + R+ + L + T ++
Sbjct: 196 FEEAVLTLDAGEVSAPVQTQFGWHIVKLNETRETP--LPTLDGLRVELTTGIQQQGLDAL 253
Query: 305 VKKLRSNAII 314
+ L A I
Sbjct: 254 ITTLTETADI 263
>gi|294497370|ref|YP_003561070.1| foldase protein PrsA [Bacillus megaterium QM B1551]
gi|294347307|gb|ADE67636.1| foldase protein PrsA [Bacillus megaterium QM B1551]
Length = 307
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 100/306 (32%), Gaps = 36/306 (11%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L T ++ + + SS++ IT GD+ K++ Q
Sbjct: 4 SLVALTTAASLVALSACSGGNDASNANDSSKVIVETKAGNITQGDLYKQMKDTIGQDQFN 63
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + +E ++ ++ G + S + ++G
Sbjct: 64 TLVRSVTEE---------KVLSKKYKVTDKELDQQLNILREQYG---DQVDSVIKQKG-- 109
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K L + + +K + E++ ++ K + + +L
Sbjct: 110 EKEVKDMLKVDILREKAATA--GIKVSDKELKKAYDEYKAQKP---QIRASHILVK---- 160
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQN 248
++ + E++++ +D L K S + G Y E + +F+
Sbjct: 161 --------DEKTANEVEAKIKKGEDFASLAKEYSTDQQSAANGGDLGYFGEGQMVKEFEE 212
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYV 305
K + + P T+ G I + DK+ + K L Q +K+++ E +
Sbjct: 213 AAYKLKKGEVSKPIKTEYGYHIIKLVDKKKVESFEKKKPELEQQIKRSKVDQAEANKKIQ 272
Query: 306 KKLRSN 311
K+L
Sbjct: 273 KELDKA 278
>gi|229151073|ref|ZP_04279281.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|228632384|gb|EEK89005.1| Foldase protein prsA 1 [Bacillus cereus m1550]
Length = 303
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
+ L NA I
Sbjct: 278 TRDLLKNADI 287
>gi|330996060|ref|ZP_08319954.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT
11841]
gi|329574057|gb|EGG55635.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT
11841]
Length = 459
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 97/298 (32%), Gaps = 30/298 (10%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQK 67
++ F KLL + L + + + + + + E I D+ R+
Sbjct: 1 MNLFKKLLYAFVFLFGGIQMHLFAQSPNNVVDEVIWVVGDEAILRSDVEAARMDFG--AN 58
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-----SAEDFSS 122
I+G + ++L ++ L + + + D++ ++ AR L S E
Sbjct: 59 ISGNPYCVIPEQLAIQKLFLHQAQLDSVEVDNSQISASME--ARLNELIMRAGSKEKLEE 116
Query: 123 FLDKQGIG-----DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
+ K K+ +Q V+ + E+ + M ++
Sbjct: 117 YYHKTMTQIREMMFESLKEQYTVQK-----VRENLTSDIKVTPAEVRRYFKDMPEDSLPW 171
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK---DCNKLEKFASKIHDVS--IG 232
+ + I Q +++ + + R+ + L S+ + G
Sbjct: 172 ISDQVEVQIITQQPRIPQEEIERVKAELRDYTDRVNNGESSFSTLAILYSEDPGSARYGG 231
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ Y+ +L P F N+ + ++ G I + DKR G+ ++
Sbjct: 232 EMDYVGRGELDPAFANVAFSLTDPKKISKVVESEYGFHIIQLVDKR---GDKVKVRHI 286
>gi|329901823|ref|ZP_08272915.1| Peptidyl-prolyl cis-trans isomerase domain protein
[Oxalobacteraceae bacterium IMCC9480]
gi|327549006|gb|EGF33618.1| Peptidyl-prolyl cis-trans isomerase domain protein
[Oxalobacteraceae bacterium IMCC9480]
Length = 244
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 57/281 (20%)
Query: 44 TTINGEVITDG--DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+NG+ I D+ + A + Q EL K+ +ELI + QE +K G+ +S
Sbjct: 12 AVVNGKSIPSSRADLMVKQAATQGQADTPELRKMVKEELINREVLVQEADKLGLG-NSAD 70
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V AR + + +V D++ K+ +
Sbjct: 71 VKSQLE-IARQS----------------------------LVIRALV-GDYVKKHPVSDA 100
Query: 162 EIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+I A K K +EY R +L ++ +A+ ++L K E
Sbjct: 101 DIKAEYDKFKATAGDKEYRARHILV--------------EKEDEAKAIIVKLKAG-AKFE 145
Query: 221 KFASKIHD----VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICD 274
A D + G + + F + ++ ++ + T P TQ G I + D
Sbjct: 146 DLAKASKDPGSAANGGDLDWASPASFVKPFSDAMVALAKGSYTEVPVKTQFGFHVIKLED 205
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R ++ + Q + + +K EY ++LR+ A +
Sbjct: 206 TR--AAKVPTLEEVKPQISESLQQKKLQEYQQELRAKAKVQ 244
>gi|86136812|ref|ZP_01055390.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193]
gi|85826136|gb|EAQ46333.1| PPIC-type PPIASE domain protein [Roseobacter sp. MED193]
Length = 283
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 89/309 (28%), Gaps = 56/309 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+ L + + + + ++ + T+NGE IT L + L
Sbjct: 5 LTFLQGTALAVFM--ALPLPALAAPHANTVIATVNGEEIT---------LGHMIMARDSL 53
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+L + L + ++ Q A L G+ +
Sbjct: 54 PDQYK-QLPDDVLY------------NAILDQLVQQTA---------LKQEL-HGGV-PH 89
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-----ITVREYLIRTVLFSI 187
+ K LA+++ ++ + + + A +Q ++ E+ +L
Sbjct: 90 YVK--LAVENEMRALLAANVIETVMKSASDEEAVRQAYEDKYSDGDGGDEFNAAHILVET 147
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246
++ L + + ++ ++ + G + + P+F
Sbjct: 148 QEDAL-----------EIKSELDTGADFSIMAKERSTGPSGPNGGDLGWFTRGRMVPEFE 196
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+L + P TQ G I + ++R + + V
Sbjct: 197 AAVLDLRAGEISAPVETQFGWHLILLKERRKTAA--PAFEEVRETLSQELQNAAVEARVS 254
Query: 307 KLRSNAIIH 315
L + AII
Sbjct: 255 DLTAAAIIE 263
>gi|56694986|ref|YP_165332.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Ruegeria pomeroyi DSS-3]
gi|56676723|gb|AAV93389.1| PPIC-type PPIASE domain protein [Ruegeria pomeroyi DSS-3]
Length = 276
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 88/297 (29%), Gaps = 44/297 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
+ + V+ ++ A + + +NGE IT L + L + Q+
Sbjct: 3 SLAFALVMALPVAAETKAEADTVVARVNGEEIT---------LGHMIIARASLPQQ-YQQ 52
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
L + L GI + + + + G + + L+ +
Sbjct: 53 LPDDVLFD------GIL---DQLVQQTLLKQQQKGETPKQIVLSLENE-----------E 92
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + ++ + ++ + Q EY +L D + +
Sbjct: 93 RSLLAGETIEEIMAVATTETAIQAAYDAQYADGFGGEEYNASHILVPSEDEAKAVKELLD 152
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
++ ++ + G + + P+F Q ++ + +
Sbjct: 153 -----------NGADFAATAKEKSTGPSGPNGGALGWFGAGAMVPEFEQAVVALNAGQVS 201
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+P TQ G I + DKR E + + + + +L ++ I
Sbjct: 202 DPVQTQFGWHVIILNDKR--KSEAPALDEVRDELAGRIQQDAIEARLAELTKDSEIE 256
>gi|313672046|ref|YP_004050157.1| ppic-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938802|gb|ADR17994.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 345
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 82/245 (33%), Gaps = 29/245 (11%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ + +K + E I L E +K+ +T D A L+ + +D
Sbjct: 100 KDKDFKKEIINEFIKHKLLLMEAKKAKVTVDKK----ALKDIAS--KLTTNNAPKVID-- 151
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFS 186
F++ + + + +++ + E E+ A ++ +K + Y +
Sbjct: 152 ----EKFEKLMEEKLLAQKFLEDKIKSEIKISEEELRAYYEEFIKTKQSKVYY--HIYQI 205
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ ++K + + + + ++++S + G + + P F
Sbjct: 206 VNEDKHKIEEAYKLLKSGKRFE--------DVAKEYSSGPEAENGGDMGIVDIENFPPVF 257
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS----AQNTPTKIEKHEA 302
+ N + ++ G I + K + + + + K +++
Sbjct: 258 DLVKNLKPNEISKIVSSEYGYHIIML--KETISSDKPSFEEIKDLLLDELIAEKKDQYLE 315
Query: 303 EYVKK 307
Y+K+
Sbjct: 316 NYLKE 320
>gi|148359402|ref|YP_001250609.1| hypothetical protein LPC_1300 [Legionella pneumophila str. Corby]
gi|148281175|gb|ABQ55263.1| hypothetical protein LPC_1300 [Legionella pneumophila str. Corby]
Length = 624
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + + L + I F + + Y S + +N + IT
Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSLQISDAKVIVNDKPITMQAFETNY 60
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
+ Q+ L+ + ++I + Q K G N V Q
Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ SA+ + L F+ + +
Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGML 154
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 84/216 (38%), Gaps = 24/216 (11%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-----KNDFMLKYGNLEM 161
+ + +S +D S+ ++ H K+++ + + D V +K E+
Sbjct: 194 DRFEQQAKISEDDIKSYYNQ------HHKKFMTSEQVTLDYVLLTMHDIKSQIKISPDEI 247
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + K +T ++ + +LF++P+N + + + A+E L K + +K
Sbjct: 248 KSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQ--DSIKQKADEVYSDLKKHPEQFDK 305
Query: 222 FASKIHD-----VSIGKAQYLL--ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + D + G ++ +++ NL + + P T+ G E +
Sbjct: 306 YVASKSDDKLSIANKGILPWITGGQNEYGRVLSNLTR--PGEISTPVQTKYGYEIFKLIA 363
Query: 275 KRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
+ + + + + Q T + A+ +++L
Sbjct: 364 YKPVTTKSLQEVENIIKDQLTSDMAQAKYAQVLEQL 399
>gi|218897938|ref|YP_002446349.1| foldase protein PrsA [Bacillus cereus G9842]
gi|218541254|gb|ACK93648.1| foldase protein PrsA [Bacillus cereus G9842]
Length = 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 105/304 (34%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G ++F+++++ G+ ++ K
Sbjct: 59 VEKVLDDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K K K+ + + +L
Sbjct: 106 EKLKLTFAFEKAIKATVTEK-------------DFKDHYKPKLQVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G+ + +F++ K
Sbjct: 145 EKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + DK++L K + + +I+ + + + L
Sbjct: 201 EVGQLSEPVKSSFGYHIIKLTDKKELKSYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|229918171|ref|YP_002886817.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium sp.
AT1b]
gi|229469600|gb|ACQ71372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium sp.
AT1b]
Length = 333
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 90/288 (31%), Gaps = 40/288 (13%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGELEK 74
+ LII + + S + G IT G+I + + + +
Sbjct: 24 ASAIALIIGAGGTYAATNAGGGESDNSAVVTYKGGEITRGEI---ADMSYDRMVPQLAFQ 80
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-DNH 133
+ L+ ++ G D V+ F + S E+F + + G+
Sbjct: 81 ETMNALLE--------KEYGDQVDQEKVDEEFSKTEEQFN-SEEEFEQAIQQAGMSGTEE 131
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK+ L Q +V + EI A K E +L +
Sbjct: 132 FKEALRGQM----LVDAAKSKLVDVTDEEIEAQFAKEN----VEVEASHILV-------E 176
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLK 251
+ Q IK+ + D +L K S G+ + + P+F+
Sbjct: 177 TEEEAQDIIKELND-----GADFAELAKEKSTDTGSGEKGGELGFFSAGAMVPEFEEYAF 231
Query: 252 KSQ--NNTTNPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTK 296
K + P +Q G I + D+++ ++ K + + K
Sbjct: 232 KEDVVGKISEPVQSQFGFHVIKVTDRKEKDLKLEDEKDRIREELAAEK 279
>gi|297379400|gb|ADI34287.1| peptidyl-prolyl cis-trans isomerase C [Helicobacter pylori v225d]
Length = 299
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 95/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+F + + K+ ++ + ++
Sbjct: 101 D-------------------QTPEFKAMI-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|332701510|ref|ZP_08421598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
africanus str. Walvis Bay]
gi|332551659|gb|EGJ48703.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
africanus str. Walvis Bay]
Length = 631
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 21/186 (11%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + ++ Q+ L A+ S+L + A Q P+ V + + +
Sbjct: 204 SPSEEEIAGYYEQNKARFTLPAQARISYLL-----------FSAEQMARPEQVPAEEVRQ 252
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
Y + ++ E +L + + Q + K + ++
Sbjct: 253 YYEAHADKFQRQE--------EVRASHILVKVAKDAPQEEVDTAKAKIEDIRKKITGSLS 304
Query: 216 CNKLEK-FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC 273
K F+ + G + + P F Q + P T+ G I +
Sbjct: 305 FADAAKKFSEGPSGPAGGDLGWFGRGRMVPTFEQAAFALKPGQVSAPVRTEFGWHIIKLE 364
Query: 274 DKRDLG 279
++R+ G
Sbjct: 365 ERREPG 370
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 19/193 (9%), Positives = 54/193 (27%), Gaps = 19/193 (9%)
Query: 38 MSSRIRTTINGEVITDGDISK---------RIALLKLQK---INGELEKIAVQELIVETL 85
+ + +N + + + R L L + +++ L
Sbjct: 36 QNGSVVGYVNDTPVNVTEYRQALERATEQLRSRFPDLDAEMLKQLGLRRQVFSQIVDAEL 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+Q+ + +G+ V G E + L G+ + ++ + +
Sbjct: 96 VRQKAKDTGMVVSDEEVREIIRSTPAFQSDRGGFDYELYRRLLRANGLTEVSYEAGMRTE 155
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + + + E E + ++ V Y + + +
Sbjct: 156 LLLDKMRQVATLP-AKASEQEARDHFAFARDTAVVRYALFPLEDFTAQASPSEEEIAG-- 212
Query: 202 IKDAEESRLRLPK 214
+ ++R LP
Sbjct: 213 YYEQNKARFTLPA 225
>gi|295700292|ref|YP_003608185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
gi|295439505|gb|ADG18674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/309 (16%), Positives = 100/309 (32%), Gaps = 58/309 (18%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE--KIAV 77
L+I + + + + + + T+NG+ ++ D I Q + +
Sbjct: 2 LALVIGATLSLAT----SATEKPFVTVNGKPVSQADADLYIGQAHAQGFSDSPQLTDHVR 57
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
ELI + Q+ +K+G F ++ + L +
Sbjct: 58 DELIRREVLFQQAQKTG-----------FDRNPEVAARAEAARQKILAQ----------- 95
Query: 138 LAIQSIWP-DVVKN---DFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKL 192
Q+ W ++V+ DF+ K + ++ A MK +Y +R +L
Sbjct: 96 --AQATWEIEIVRAYMQDFLKKNPVSDDQLKAMYNDMKAKGGSTQYKVRHILV------- 146
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQYLLESDLHPQFQN 248
K +A++ +L K A + D + G ++ S + F +
Sbjct: 147 -------KDQGEAKDIIAKLNKG-ASFGDLAKESIDADTRYNGGDLGWITSSKVVKPFAD 198
Query: 249 LLK-KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ + T P T G I + D R L + + + VK
Sbjct: 199 AVSHLHKGEYTRMPVKTGYGFHVIEVDDTRPLQ--VPSFEDMKPMLYQQAQAELVDRMVK 256
Query: 307 KLRSNAIIH 315
LR+ A I
Sbjct: 257 NLRAKATIQ 265
>gi|218128453|ref|ZP_03457257.1| hypothetical protein BACEGG_00021 [Bacteroides eggerthii DSM 20697]
gi|217989344|gb|EEC55657.1| hypothetical protein BACEGG_00021 [Bacteroides eggerthii DSM 20697]
Length = 455
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 99/300 (33%), Gaps = 39/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
+ + + Y + + + E I ++ + R+ AL + +K + +
Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + I V N + + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSEAEVIQRVDYMTNMYITNIGSREKMEEYFNKTSSQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L ++G+ +Q L + I P V+ F + IP
Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ ++ ++ P L+ V+KR++D + + + L + S+ +I +
Sbjct: 176 TQVEVQ-IITQQPKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRASAIRGGE 234
Query: 236 YLLESD--LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
L P + N+ + N + ++ G I + +KR G+ ++ +
Sbjct: 235 IEFSGRGMLDPAYANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR---GDRIKTRHILLK 291
>gi|110635342|ref|YP_675550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium sp.
BNC1]
gi|110286326|gb|ABG64385.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chelativorans sp.
BNC1]
Length = 351
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/288 (16%), Positives = 88/288 (30%), Gaps = 48/288 (16%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLK 86
+ + + A S + TING+ IT+ D++ L Q A+ +I L
Sbjct: 63 LSAAPAIAQESPVVATINGQQITEADLALAQEELGPQFGQMPEDQRRAAALSAVIDVRLF 122
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
E +K GI + R T ++L +++
Sbjct: 123 ASEAQKEGIDKTD--------EFQRRT----------------------EFLRQRALHSA 152
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + + E+ ++ K E R +L + + + AE
Sbjct: 153 YIDANVVKPITDEELNARYEEEVAKIPQQEEVHARHILVDSEEEAKNIITQLDEGGDFAE 212
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQN-NTTNPYVTQ 264
++ + + G Y E + P+F + ++ P TQ
Sbjct: 213 IAKEKSKDGAA-----------ANGGDLGYFTEGAMVPEFSKAAFAMEPGAHSEEPVKTQ 261
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
G I + DKR + Q I E + LR NA
Sbjct: 262 FGWHVIKVEDKRMQP--PPALEQVKDQIRSMVIRDKYMETLVSLRENA 307
>gi|317475721|ref|ZP_07934980.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|316908104|gb|EFV29799.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 455
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 99/300 (33%), Gaps = 39/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
+ + + Y + + + E I ++ + R+ AL + +K + +
Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDRDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + I V N + + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSEAEVIQRVDYMTNMYITNIGSREKMEEYFNKTSSQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L ++G+ +Q L + I P V+ F + IP
Sbjct: 127 IRETLRDNAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ ++ ++ P L+ V+KR++D + + + L + S+ +I +
Sbjct: 176 TQVEVQ-IITQQPKVPLEEIENVKKRLRDFTDRITKGETSFSTLARMYSEDRASAIRGGE 234
Query: 236 YLLESD--LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
L P + N+ + N + ++ G I + +KR G+ ++ +
Sbjct: 235 IEFSGRGMLDPAYANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR---GDRIKTRHILLK 291
>gi|332992311|gb|AEF02366.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas
sp. SN2]
Length = 630
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 19/154 (12%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKIN- 69
+ ++++ + V + + T+NGE I+ ++ +R + +
Sbjct: 15 MAIIALIVLSFVFAGVGSYLTSSGTTAVATVNGEEISAQELERGYQNQRAQMESQFGESI 74
Query: 70 ----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLS 116
+ + + LI E L +Q+ ++ G+ + VQ
Sbjct: 75 AQLFSSEQYLSDFRRNVLDRLIAEKLIQQQAQEMGLRVSDAQIRETIVQMPEFQFGGQFD 134
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ F + L + G F+ YL IQ +
Sbjct: 135 NDRFQTILRQNGFQVADFRDYLRIQMTQNQLAAA 168
>gi|271499601|ref|YP_003332626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii
Ech586]
gi|270343156|gb|ACZ75921.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii
Ech586]
Length = 626
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 89/280 (31%), Gaps = 33/280 (11%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLK 86
+NG+ IT + + + + ++ +L K + +LI ETL
Sbjct: 42 AAKVNGQEITRSQLEQGVQNERNRQQEMLGDNFSALAANEGYMQQLRKQVLSQLIDETLV 101
Query: 87 KQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q G+ + + N + + + + + G+ + + Q+L Q +
Sbjct: 102 VQYAHTLGLNISDEQIKQAIFSVPEFQTNNRFDNDKYLAQVRQMGLTPDAYAQFLRKQLL 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+++ G+ + + + + ++ IRT + +
Sbjct: 162 TQQLIRG-----LGSTDFVLQQELDNLVAMAAQDRTIRTATLDLGVRARSQTVSDDEVKN 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++++ R + + + SI + +D+ ++ + T P
Sbjct: 217 FYDQNKSRYLAP-EQFKVSYIMLDAASIMDKTKVDNNDI----AAYYEQHKGEFTQPERK 271
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ V I K + ++ L + ++ +
Sbjct: 272 KYSV----IQLKTEADAKVVLDQLKKGADFAALAKEKSTD 307
>gi|254252165|ref|ZP_04945483.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa
AUO158]
gi|124894774|gb|EAY68654.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa
AUO158]
Length = 260
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/284 (19%), Positives = 95/284 (33%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + +F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRAMIENFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L D++ Q + + K A+
Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILV---DSEQQAKELIAKIKAGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I + D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDQPVKTQFGWHIIRVDD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDIAPPPFDQV-KAQIAQQIVQQKLQAFEEG----LRQQAKIQ 260
>gi|332525967|ref|ZP_08402108.1| putative exported isomerase [Rubrivivax benzoatilyticus JA2]
gi|332109518|gb|EGJ10441.1| putative exported isomerase [Rubrivivax benzoatilyticus JA2]
Length = 270
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 52/281 (18%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG+ + + + A Q+I EL++ A ++++ + QE EK GI
Sbjct: 30 IAVVNGKPVPKSRVETLLQQAARAGQQIGPELQQQARDQVVLREIFVQEAEKKGIATS-- 87
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ L+ + ++ + + + +
Sbjct: 88 ------ADYKAQMELA----------------------RQSILIRELFDS-YRKTHPVTD 118
Query: 161 MEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ A K K + EY R +L D ++++ +L
Sbjct: 119 ADAQAEYDKFKAAASGTEYRARHILVETEDE------------AKKLIAQIKSGGSFEEL 166
Query: 220 EKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDK 275
K SK + G + P+F + + T P +Q G I + D
Sbjct: 167 AKKHSKDPGSGENGGDLDFAKPDAYVPEFSQAMAALKKGEMTQTPVKSQFGWHIIRLDDT 226
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
R+ + + Q + +Y ++LR A Y
Sbjct: 227 RE--AQFPAFDDVKDQIKQRIEQARLQQYQEELRKKARTDY 265
>gi|332141940|ref|YP_004427678.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551962|gb|AEA98680.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 630
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 20/175 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIA--------- 61
+ ++++ + V + + T+NGE I+ ++ +R
Sbjct: 15 MAIIALIVLSFVFAGVGSYLTSNGTTAVATVNGEEISAQELERAYQNQRAQMESQYGESI 74
Query: 62 --LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLS 116
L ++ + K + LI E L +Q+ G+ + VQ
Sbjct: 75 AQLFSSEQYLADFRKNVLDRLIAEKLIQQQATNMGLRVSDEQIRETIVQMPEFQFGGQFD 134
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG-NLEMEIPANKQKM 170
E F + L + G F+ YL Q + + + E+E Q+
Sbjct: 135 NERFQAILRQNGFQVADFRDYLRTQMTQNQLAAALTNSSFALDGEVEQANALQRQ 189
>gi|116051907|ref|YP_789250.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa UCBPP-PA14]
gi|115587128|gb|ABJ13143.1| putative peptidyl-prolyl cis-trans isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGVAIGE-DLLAR----ELQYHPADSYALALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ + G ++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLG 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + A +A ++A +++ +Y+ L +A I +
Sbjct: 217 REGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 261
>gi|229046560|ref|ZP_04192211.1| Foldase protein prsA 1 [Bacillus cereus AH676]
gi|228724735|gb|EEL76041.1| Foldase protein prsA 1 [Bacillus cereus AH676]
Length = 303
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLHDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 278 TRELLKNADI 287
>gi|227537536|ref|ZP_03967585.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242673|gb|EEI92688.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 458
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 101/275 (36%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPI--VSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGE 71
+ +++FC++ ++ + R+ T+ +I DI + L + N +
Sbjct: 1 MIKQLCVLLFCVLGSINFTFAQGKIVDRVVATVGANIILQSDIDMQYSQNLAQGMSPNED 60
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDFSSFLDKQ 127
+ +Q+L+ + L Q+ I + V+ R G E SFL++
Sbjct: 61 FKCYILQQLLTQKLLAQQAVLDSIEVSESEVDDNLNNRLNVMTRQAGGK-ERLESFLNRS 119
Query: 128 GIGD-NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + +A Q ++ + + K +E+ + + ++ + +
Sbjct: 120 LLQYKEEMRTSVAEQLK-AQKMQQNIVQKIDVTPLEVKRYFEGLNKDSLPYFDTEVEIGE 178
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKIHD--VSIGKAQYLLESDL 242
I + + + K AE+ R ++ D + + S+ V+ G + +
Sbjct: 179 IVMYPVLTKEEKEASRKRAEDLRKQIVDGSDFGTIARLYSEDKGSAVAGGDLGFSTRDNY 238
Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+F + K + + T+ G ++ + ++R
Sbjct: 239 VKEFSAVAFKLKPGEISQVFETEYGFHFLQVLERR 273
>gi|294102245|ref|YP_003554103.1| hypothetical protein Amico_1258 [Aminobacterium colombiense DSM
12261]
gi|293617225|gb|ADE57379.1| hypothetical protein Amico_1258 [Aminobacterium colombiense DSM
12261]
Length = 358
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 87/249 (34%), Gaps = 16/249 (6%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + + +I+ET + +E G+ ++ Q + + E F L I
Sbjct: 85 IRQAVLDGMIIETELAKAVESRGVKASDQEIDDVIKQISNQFP-TIEAFQKHLSDNDIKM 143
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ + + Q VV+ E+ K K+ + R + +
Sbjct: 144 DALRANIGTQLSQQKVVE-QAASTVVVTPEEVQEFYDKGKDA----FFSRPAGRKVVYAR 198
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQNL 249
N+ K ++ ++ + LE+ S+ SIG ++ ES + +F+ L
Sbjct: 199 FSNKEAADKIYEELKKDGSKWD---ALLEEVTSEDKKESIGYEAPVFVPESGMQDKFETL 255
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY----LSAQNTPTKIEKHEAEYV 305
S P + + + +K L + A T K E+ + ++V
Sbjct: 256 KDLSVGQVAPPIEITSN-DIMVVLNKEVLEASTVSFDEVSNDIKALLTNQKNEEAQMKFV 314
Query: 306 KKLRSNAII 314
+L+ NA +
Sbjct: 315 SELKENAKV 323
>gi|289522411|ref|ZP_06439265.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504247|gb|EFD25411.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 388
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/326 (14%), Positives = 109/326 (33%), Gaps = 25/326 (7%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVS----YKSWAMSSRIRTTINGEVITDGDIS----K 58
T + + FV+ IF I S + ++ NG I I +
Sbjct: 8 TRTKVIMIAVAVAFVISIFAGYGIYSRRGDSSATTEKDKVVAKANGTNIMLSQIDMGVRQ 67
Query: 59 RIALLKLQKINGE----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+ + + + L K + +++++ +E++++ I + +N +
Sbjct: 68 LMDQMGISNLPQSQYYILRKHVLDQIVLDMELDKEVKENKIEVTDDEINVAMDRIISQFP 127
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ E + +L I + K+ L Q +++ E E+ Q+
Sbjct: 128 -TKEAYQDYLSAYNIKEEDLKKELRRQLAQQKLLQTAVKTDDTVTEEEM----QEFYEAR 182
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+Y +R + + + + + ++DA S ++ +H S K
Sbjct: 183 GDDYFVRPEGLWV-NFAIFSDEKTAQGVRDALASGQTWDDVMSQYGD--KALHSTSYDKP 239
Query: 235 QYLLESDL--HPQFQNLLKKSQNNTTNPY---VTQKGVEYIAICDKRDLGGEIALKAYLS 289
L + L + L + + + P Q G+ + K++ +K +
Sbjct: 240 LLLPMTTLEAQEELLPLKELKEGELSRPIQLDEEQFGIYLVKGYQKQEKIPYDEVKENIK 299
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + EY++ L A +
Sbjct: 300 LALSQQKAQAQRQEYLQGLVDRANVE 325
>gi|229110311|ref|ZP_04239883.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
gi|228673051|gb|EEL28323.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
Length = 303
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEVTKQIKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEAQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKDNIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 278 TRELLKNADI 287
>gi|220904184|ref|YP_002479496.1| hypothetical protein Ddes_0911 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868483|gb|ACL48818.1| hypothetical protein Ddes_0911 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 390
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 83/291 (28%), Gaps = 37/291 (12%)
Query: 40 SRIRTTINGEVI-------------TDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ T+NGE I D +R +L +++ G+ A+ LI+ L
Sbjct: 51 EGVVATVNGEPIYLRTVQALLDGRSAALDTMQRPSLENMKRQYGD----ALGTLIIYALV 106
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
QE+ I + V + G E+ + FL ++ + N ++ +
Sbjct: 107 NQELRSLQIPVTESAVESAVANVRADYG-GEEELARFLAEESLDGNEWRLLMRDYLAMQS 165
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
K + + + E+ + L + + Q
Sbjct: 166 FEKRVLLPGIRISLDSV----RGYYKRHETEFNLPETLDICLTSAVDRQAV--------- 212
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQK 265
+ + + + + L +Q L+K + P
Sbjct: 213 ---DNFCASFASVGPVREEQTGELLLQCVEAGAAQLPNAWQKGLEKLAPGQCLPPRQEGD 269
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAII 314
+A+ + +AY + + E A ++ S A +
Sbjct: 270 RWFGLALVRRNPAHVMSVAEAYPLIENILREREKEAAFAHWLTAALSRAQV 320
>gi|149916817|ref|ZP_01905319.1| hypothetical protein PPSIR1_05633 [Plesiocystis pacifica SIR-1]
gi|149822534|gb|EDM81923.1| hypothetical protein PPSIR1_05633 [Plesiocystis pacifica SIR-1]
Length = 323
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/324 (12%), Positives = 109/324 (33%), Gaps = 34/324 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALL----------- 63
L + + P +++ + + RI ++ E+I + D+++ +
Sbjct: 7 LAVGASMSSALVAPELAHAADPQVLDRIVAVVDDEIILESDLARWLMFDEEIAFELQKLQ 66
Query: 64 -----KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SA 117
+L + ELE +A+ LI L + + + V + Q AR+ L S
Sbjct: 67 NPTEDQLMRRLAELEPLALDNLIGRKLMLSQAQTFQVGATEQEVEVYLQQLARSAQLSSV 126
Query: 118 EDFSSFLDKQGI--GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
+ + +++ G ++ L I + +L + ++ +++
Sbjct: 127 AELRTAVEQSGRYGTWPEYRNKLREDIILYKL--QGQLLNIAVSDAQVLERYRELSKGEE 184
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+R ++F ++ + ++ + +R E A+++ + +
Sbjct: 185 SRLAVRRLVFRAGEDSSERDAVFKRAK-----TVVRRLSGGEDFEAVAAELGQAAESEEV 239
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+ L K + P + +G + + + ++ +
Sbjct: 240 TRSGVSRPIG-ERLFKAKAGDVVGPLSSGQGYVVFLVEEV--IASDLLGFEEAKDRLRRL 296
Query: 296 KIEKHEAEYVKK----LRSNAIIH 315
E+ + +K+ LR+ A +
Sbjct: 297 LEEEARQKALKELYEQLRARAHVD 320
>gi|313681753|ref|YP_004059491.1| ppic-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum
kujiense DSM 16994]
gi|313154613|gb|ADR33291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum
kujiense DSM 16994]
Length = 280
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 94/283 (33%), Gaps = 41/283 (14%)
Query: 45 TINGEVITDGDISK------RIALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITF 97
T+NG+ IT +++K + L EL + ++ +I + L + +K G+
Sbjct: 26 TVNGDEITSDEVNKVLMEGTQGRFDSLPADKQNELRQRIIEGMIAQELVYDDAQKIGV-- 83
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
L ++++ L+ N K LA + +W +
Sbjct: 84 -----------------LDSKEYKQELEAL---VNRLKVQLAAK-VWEQQQFEAIKVDAK 122
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
++ AN + + + R +L + + ++ R
Sbjct: 123 EVKAYFDAN--PEEFVDKEKIHARHIL--VKTEGEAQSIIKSMKGLSGDKLRNEFI---A 175
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-TNPYVTQKGVEYIAICDK 275
+ + ++ G Y + P F + + + P +Q G I I DK
Sbjct: 176 QAKSKSTGPSAAKGGDLGYFPRGQMVPSFNDAAFAMKEGAISSTPVQSQFGYHVIYIEDK 235
Query: 276 RDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ G +K ++ + K + + + LR+ A I Y
Sbjct: 236 KPAKKLGFDEVKNFIEQRLKMDKFKATMEKKMSDLRAKAKIIY 278
>gi|296272150|ref|YP_003654781.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter
nitrofigilis DSM 7299]
gi|296096325|gb|ADG92275.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter
nitrofigilis DSM 7299]
Length = 269
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/299 (17%), Positives = 98/299 (32%), Gaps = 44/299 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGELEKIAVQEL 80
I+ + + ++ ++NGE +T D+++ R ++ + + E + + +L
Sbjct: 5 ILSIVTAFALTATTLSAAETFASVNGEDVTSQDVAQLLRGQNVQFENLPKETKDKVISQL 64
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + L Q+ KSGI E + L K K+ LA+
Sbjct: 65 IEKKLLTQKAVKSGIE-------------------KEEKYKDALSK-------IKEDLAL 98
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ W + NK+K K E +L +
Sbjct: 99 EL-WMQNEYAKVKATDAEEKSFYDKNKEKFKTPDTLE--ASHILVKT-------EKEAND 148
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT- 258
I ++ + +KF+ G + P+F + L + T
Sbjct: 149 IIAKLNIAKNKKGSFEELAKKFSIGPTKTKGGYLGKFQAKQMVPEFSKAALALKKGEYTK 208
Query: 259 NPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P TQ G I + +K + KA ++ K K E V+KL+ +A I
Sbjct: 209 KPVKTQFGYHVIYLENKEVSQILPFDKV-KANIAKMIVQEKYGKMIKEEVEKLKKDAKI 266
>gi|269926821|ref|YP_003323444.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum
terrenum ATCC BAA-798]
gi|269790481|gb|ACZ42622.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum
terrenum ATCC BAA-798]
Length = 380
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 103/281 (36%), Gaps = 29/281 (10%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NGE IT+ + + +L+K G + + ++++ L +QE K G++ +
Sbjct: 89 GIVAVVNGEKITNKEFYQ-----ELEKRYG---QDLISDMVITKLIEQEARKRGVSLSNE 140
Query: 101 TVNYFFVQHARNT-GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ Q G S E+ + Q + + ++ + + ++ +
Sbjct: 141 DMQKALQQLQTAFPGQSIEEIAQ---GQNMTGDQLREQVRV----MALLDKMLAPQVKVT 193
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E + + + + +R + + R D ++ + + K +K
Sbjct: 194 EQDARNFYNQNPQVFQSQEQLRLGQVVTDNEQQAADAAQALR--DGKDLKEVIAKYGSKS 251
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG-VEYIAICDKR- 276
+ A K G Y ++L PQ +++ + + ++P G + + D++
Sbjct: 252 PERAKK-----NGDLGYKSLNELDPQLGMTVMQMAVGDVSDPIRLPDGSYAVVKMIDRKG 306
Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + KI +++++L S A I
Sbjct: 307 GVQMPFDQVKDRAMEL-AKQDKINSMIPKFLEELYSKAKIQ 346
>gi|167586945|ref|ZP_02379333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ubonensis Bu]
Length = 259
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 89/283 (31%), Gaps = 58/283 (20%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELE--KIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L Q + + QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQPDSPQMQQAVRQELVNREILMQEAIRRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + DF+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRALIEDFLKKNQPTD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A ++ K RE + +L DN+ Q + + K A+ L
Sbjct: 114 AEVKARYDELVKGAANRELHLHHILV---DNEQQAKDLIAKIKAGAK---------FEDL 161
Query: 220 EKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICDK 275
K SK + G + P+F K Q T+ P TQ G I + D
Sbjct: 162 AKQYSKDPGSGKNGGDLDWADPKAYVPEFAAAATKLQKGQMTDEPVKTQFGWHIIRVDDV 221
Query: 276 RDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + + K ++ Q K++ E LR A +
Sbjct: 222 RSVAPPPFDQV-KPQIAQQMVQQKLQAFEES----LRQQAKVQ 259
>gi|170736766|ref|YP_001778026.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
gi|254249421|ref|ZP_04942741.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
gi|124875922|gb|EAY65912.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
gi|169818954|gb|ACA93536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
Length = 276
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/311 (18%), Positives = 100/311 (32%), Gaps = 63/311 (20%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--EKIAVQ 78
+L I + +S A ++ T+NG IT D+ LL+ +
Sbjct: 10 LLTIVALAGALSGPVHAQTAETVATVNGTPITQADVDT---LLRASGQPDSPQIRQAIKN 66
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGDNHFKQY 137
+LI L +Q EK+ D V + ++AE + + +
Sbjct: 67 QLITRVLVQQAAEKANY-ADKPEVKAAM----QQAKVTAEVQL------------YLRDH 109
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + + VK + E+ A K EY R ++ P
Sbjct: 110 VKPEPVTDEQVKARY--------DELVAALGKN------EYKPRVIVVKDPVAAATV--- 152
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLL---------ESDLH-PQF 246
S L+ K + L + S + G+ ++ + L P
Sbjct: 153 ---------LSELKAGKSFDGLARQYSLAPSRDTGGELPWVSFNTPAAEGKTARLPLPVA 203
Query: 247 QNLLKKSQNNTTNPYVTQKGV-EYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303
Q L K + TT + GV + + KR + G K L Q EK A+
Sbjct: 204 QALEKLTVGATTKDSIPVDGVRAIVKLDAKRPTQVPGFETAKPTLQQQLQAIAAEKASAQ 263
Query: 304 YVKKLRSNAII 314
+ L +A I
Sbjct: 264 MIGNLLKDAKI 274
>gi|332829602|gb|EGK02248.1| hypothetical protein HMPREF9455_01518 [Dysgonomonas gadei ATCC
BAA-286]
Length = 461
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 101/289 (34%), Gaps = 39/289 (13%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKING 70
+K + +L I ++ + +I + E I D+ +++ L + ++I G
Sbjct: 2 VKQAGKFILLAILLSSGLLCKAQDNIIDQIIWVVGDEAILKSDVEKARQMMLSRGERIEG 61
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ + ++L V+ L + + I + V+ + + +
Sbjct: 62 DPYCLIPEQLAVQKLFLDQAKIDSIDVPTAEVSRGVTR---QENMVIANLG--------S 110
Query: 131 DNHFKQYLAIQSI-----WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR---- 181
++YL W + ++N ++ ++ ++ K + VR Y +
Sbjct: 111 KEKVEEYLQASMSQLREEWREEIRNGYL--VSEVKKKLVGKKSSLTPSEVRRYYAQLPQD 168
Query: 182 -----------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV- 229
++ + P L V++R++D R+ + + L S+
Sbjct: 169 SLPYIPTTVEVQIITNEPIVPLAEIDKVKERLRDFTN-RVNAGESFSTLAIMYSEDGSAQ 227
Query: 230 SIGKAQYLLESDLHPQFQNLLKKS--QNNTTNPYVTQKGVEYIAICDKR 276
+ G+ + + +F N+ +N T+ G I + ++R
Sbjct: 228 NGGETGFSGRASWVTEFSNMAFSLNDPKKVSNIVETEYGFHIIQLIERR 276
>gi|255011717|ref|ZP_05283843.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides
fragilis 3_1_12]
gi|313149552|ref|ZP_07811745.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12]
gi|313138319|gb|EFR55679.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12]
Length = 456
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/321 (14%), Positives = 112/321 (34%), Gaps = 46/321 (14%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDIS--KRIALLKLQK 67
+K + +++F + + + S+A + + E I D+ + AL + +K
Sbjct: 1 MKKFVNFKFVVMFALALVANVASYAQDNVIDEVVWVVGDEAILKSDVEEARLAALYEGRK 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGLSAE- 118
+G+ + +EL V+ L + I + V N + + AE
Sbjct: 61 FDGDPYCVIPEELAVQKLYMHQAVLDSIEVPESEVIQRVDYQINNYIQALGSRERMEAEF 120
Query: 119 -----DFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQK 169
L + G +Q L + P V+ F + +P +
Sbjct: 121 NKTSTQIREALRENARDGAIVQRMQQKLVGDIKVTPAEVRRYFKDLPQDSIPYVPTQVEV 180
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
++ P + V++R+++ + + D + L S+
Sbjct: 181 ------------QIITQQPKVPISEIEDVKRRLREYTDRINKGESDFSTLALLYSEDRGS 228
Query: 230 SI--GKAQYLLESDLHPQFQNL---LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI-- 282
+I G+ ++ + + P++ N+ L+ ++ + ++ G I + +KR G+
Sbjct: 229 AIKGGETGFMGKGQMVPEYANVAFNLQDTK-KISKIVESEYGFHIIQLIEKR---GDRIN 284
Query: 283 ALKAYLSAQNTPTKIEKHEAE 303
L + + ++ + A
Sbjct: 285 TRHILLKPKVSDKELNEANAR 305
>gi|87311619|ref|ZP_01093736.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula
marina DSM 3645]
gi|87285622|gb|EAQ77539.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula
marina DSM 3645]
Length = 558
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 95/308 (30%), Gaps = 33/308 (10%)
Query: 40 SRIRTTINGEVITDGDI--------SKRIALLKLQKING-------ELEKIAVQEL---- 80
+RI + G+ I GDI RIA L ++ E ++A++EL
Sbjct: 229 ARIIALVGGQPILAGDILGPVNQALETRIAELSPEQREQVTEEVLEEQRQMALRELLPGL 288
Query: 81 IVETLK----KQEIEKSGITFDSNTVNYFFVQHARNTGL------SAEDFSSFLDKQGIG 130
I + + I ++ ++ + ++ + L + + L ++G
Sbjct: 289 IDTKMIYLDFIRTIPPDKLSEMQGHLDSQYAEYQMQSDLDQYEVHTPAELDIVLRREGSS 348
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K+ Q + +K ++ + + +
Sbjct: 349 LEKKKRLFLEQIVASQQLKTHVKPNTEVSHQQMLDYYHDHAADYASPARAKWEQLMVRFD 408
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF--QN 248
K ++ ++ I + LR +K + G + + L +
Sbjct: 409 KFSSKAEAEQAIAEMGNQVLRGAPLDAVAKKESQCFRASEGGLYDWTTRNSLKNETIDAA 468
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVK 306
+ N + + +G + + ++ + + + + + + + + +YV
Sbjct: 469 IFSLPTNRLSQIIESPEGYHIVRVLERDEASIKPFRDAQLEIKEKIRRERANQAQRDYVA 528
Query: 307 KLRSNAII 314
+R I
Sbjct: 529 DVRKRTQI 536
>gi|54294744|ref|YP_127159.1| hypothetical protein lpl1821 [Legionella pneumophila str. Lens]
gi|53754576|emb|CAH16060.1| hypothetical protein lpl1821 [Legionella pneumophila str. Lens]
Length = 624
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 46/154 (29%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + + L + I F + + Y S + +N + IT
Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
+ Q+ L+ + ++I + Q K G N V Q
Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ SA+ + L F++ + +
Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQKEVRQGML 154
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 85/214 (39%), Gaps = 20/214 (9%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-----KNDFMLKYGNLEM 161
+ + +S +D S+ ++ H K+++ + + D V +K E+
Sbjct: 194 DRFEQQAKISEDDIKSYYNQ------HHKKFMTSEQVTLDYVLLSMHDIKSQIKISPDEI 247
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQN-QGFVQKRIKDAEESRLRLPKDCNK-- 218
+ + K +T ++ + +LF++P+N + Q ++++ + + P+ +K
Sbjct: 248 KSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQDSIKQKADEVYNDLKKHPEQFDKYV 307
Query: 219 LEKFASKIHDVSIGKAQYLL--ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
K K+ + G ++ +++ NL + + P T+ G E + +
Sbjct: 308 ASKSDDKLSIANKGILPWITGGQNEYDRVLSNLTR--PGQISIPVQTKYGYEIFKLIAYK 365
Query: 277 DLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
+ + + + Q T + A+ +++L
Sbjct: 366 PVTTKSLQEVENIIKDQLTSDMAQAKYAQVLEQL 399
>gi|94502167|ref|ZP_01308665.1| peptidyl-prolyl cis-trans isomerase D [Oceanobacter sp. RED65]
gi|94425692|gb|EAT10702.1| peptidyl-prolyl cis-trans isomerase D [Oceanobacter sp. RED65]
Length = 608
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/390 (13%), Positives = 120/390 (30%), Gaps = 89/390 (22%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKI 68
+ +++ F + I S + +NGE IT ++ + +LQ+
Sbjct: 11 GIAARIIVGLIILTFALFGIESIVALGGGEDAPAEVNGEEITLLEVQQAVNAQKTRLQRQ 70
Query: 69 NGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTG 114
GE L + AV+ LI + L Q +SG+ ++ V N
Sbjct: 71 FGENFDPAMFDENLLRQAAVRSLIDQELLAQAATESGVYISDQDIDRLIVQSPNFQVNGA 130
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLA-------IQSIWP---------------------- 145
A + + G +++ + +QS W
Sbjct: 131 FDAATYDLTIRSMGFTRMTYREAVRESIKTQQVQSAWQGTEFATDLEKEQLSLLENQIRS 190
Query: 146 ----DVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLF---SIPDNKLQNQG 196
+ ++F + +I + + +T ++ V+F + + + +
Sbjct: 191 IKYKEYKSDNFKESVQLSDEDIQSFYEANDSRFMTTESVIVDYVIFDKEKLAEQVIVTED 250
Query: 197 FVQKR----------IKDAEESRLRLPKDCNKLEKFASKIHDV----------------- 229
+Q+R K+ + + L ++ K S+
Sbjct: 251 EIQERYDAMLQESQENKEYRVAHIMLLSADDEARKTLSEAKSKLGQGESFESLAERYSED 310
Query: 230 -----SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGE 281
+ G + + P+F + +L ++ T+ G+ I + D R ++
Sbjct: 311 DTSKYAGGDLGFASATIYEPEFADAVLSLEVGAVSDIVETRDGLHLIKLVDTRQPEIAAY 370
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+K + +IE E ++ +
Sbjct: 371 DEMKDTIEQNLVNEQIEVRYIEMLESFKDA 400
>gi|260062279|ref|YP_003195359.1| putative exported peptidyl-prolyl cis-trans isomerase
[Robiginitalea biformata HTCC2501]
gi|88783841|gb|EAR15012.1| putative exported peptidyl-prolyl cis-trans isomerase
[Robiginitalea biformata HTCC2501]
Length = 481
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 98/308 (31%), Gaps = 30/308 (9%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ----- 78
+ + P + I + VI D D+ K + LK G +
Sbjct: 42 LASLDPPATTGERRKLDGIAAVVGDYVILDSDVEKTMIDLK---NQGATDAEIDDCSLLG 98
Query: 79 ELIVETLKKQEIEKSGITFDSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+L+ + L + + I + V + + Q + G S E F +K+
Sbjct: 99 KLMEDRLYAHQAVQDSILVSDDEVYAQSDRYLQQLEQRLG-SMEKLLQFYNKE--SAEDL 155
Query: 135 KQYL----AIQSI---WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS- 186
++ L +Q + V D + + + + K + E I ++
Sbjct: 156 REELFQINKLQMLSQKMQQKVVGDIKVTPEEVRQFFRSIPEDEKPVFGAELEIAQIVIKP 215
Query: 187 -IPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+P+ + Q + D E++ + + + G ++
Sbjct: 216 EVPEAEKQKVIDQLNAIKADVEDNDANFRVKAILYTE--DEASRSNGGMYTMTRQTQFVK 273
Query: 245 QFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+F+++ + + P+ TQ G + + R + + + +E+ +
Sbjct: 274 EFKDVAFSLQEGEISEPFETQFGFHILMVEKIRGQELD-VRHILIRPEVPQAALEEARKK 332
Query: 304 YVKKLRSN 311
+ +R +
Sbjct: 333 -LDTIRQH 339
>gi|293603516|ref|ZP_06685937.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
gi|292817952|gb|EFF77012.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
Length = 160
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-DV 229
+ V + R +L + + + ++R+ E+ R RL K E A + D
Sbjct: 1 APVEVMQTRARHILIKT--STVMSDETARQRL---EQVRQRLVSGGAKFEDMARQYSQDA 55
Query: 230 S---IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG-EIAL 284
+ G+ +L + P F+ + + P + G I + ++R +
Sbjct: 56 TAPQGGELGWLNPGETVPPFEAAMNALKPGEISPPIQSPFGWHLIQVEERRQHDATDDLA 115
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + +++++LR+ A +
Sbjct: 116 RMKARQILFERRAQPAFEDWLEQLRAQAYVD 146
>gi|40063240|gb|AAR38067.1| PPIC-type PPIASE domain protein [uncultured marine bacterium 577]
Length = 263
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 98/303 (32%), Gaps = 50/303 (16%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--EKIA 76
F+ + +P ++ + ++ + +NG+ I + + + L Q K
Sbjct: 5 KFLKLTAIFLPALAVVTTTHAAPL-AKVNGKTIPNSRLELVMKNLISQGQKDTPETRKAI 63
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+LI + + QE + + D +
Sbjct: 64 RDDLIKQEVLSQEALRKKLDKDPDISTQIM------------------------------ 93
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQN 194
+ QS+ ++ DF+ K E E+ Q + ++ +EY +L S
Sbjct: 94 -ITRQSVLIRALQADFIKKNDPSEKELRDEYQAVSAASMGDQEYNPSHILISTEAEAKDI 152
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKS 253
++K K E ++ R D +K + G+ + P + L+K
Sbjct: 153 IAKIKKGGKFEEIAKDRSIDDGSKNK----------GGELGWSSARSYAQPFAEALVKLK 202
Query: 254 QNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ T P + G I R L I + + +++ Y+++L+ A
Sbjct: 203 KGEITQAPVKSSFGWHVIRSNGMRPLK--IPPFKEVKQKVQQRILQQKFQAYLEELKDKA 260
Query: 313 IIH 315
I
Sbjct: 261 KIE 263
>gi|329962620|ref|ZP_08300568.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057]
gi|328529651|gb|EGF56549.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057]
Length = 455
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 101/300 (33%), Gaps = 40/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
+ + + Y + + + E I ++ + R+ AL +K + +
Sbjct: 7 FKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALFDGRKFDRDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + I N V N + + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVSENEVIQRVDYMTNMYIANIGSREKMEEYFNKTSSQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L ++G+ +Q L + + P V+ F + + IP
Sbjct: 127 IRETLRENAREGLKVQKMQQKLVGEIKVTPAEVRRYFKNRPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ ++ + P L+ V+KR+++ + R+ + + L + S+ ++ +
Sbjct: 176 TQVEVQIITLQ-PKIPLEEIEDVKKRLREYTD-RINKGESFSMLARMYSEDRGSAMRGGE 233
Query: 236 YLLESD--LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
L P + N+ + N + ++ G I + +KR G+ ++ +
Sbjct: 234 IEFSGRGMLDPAYANVAFNLQDPNKVSKIVESEYGFHIIQLIEKR---GDRIKTRHILLK 290
>gi|52842082|ref|YP_095881.1| hypothetical protein lpg1855 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629193|gb|AAU27934.1| peptidyl prolyl cis-trans isomerase D [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 624
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 44/154 (28%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + + L + I F + + Y S + +N IT
Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDRPITMQAFETNY 60
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
+ Q+ L+ + ++I + Q K G N V Q
Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ SA+ + L F+ + +
Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGML 154
Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 80/211 (37%), Gaps = 14/211 (6%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ + +S +D S+ ++ + + + + + +K E++
Sbjct: 194 DRFEQQAKISEDDIKSYYNQHHKKFMTL-EQVTLDYVLLSMHDIKSQIKISPDEIKSYYE 252
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ K +T ++ + +LF++P+N + + + A+E L K + +K+ +
Sbjct: 253 ENKSNYLTPAQWRVAHILFAVPENATKEEQ--DSIKQKADEVYSDLKKHPEQFDKYVASK 310
Query: 227 HD-----VSIGKAQYLL--ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
D + G ++ +++ NL + + P T+ G E + + +
Sbjct: 311 SDDKLSIANKGILPWITGGQNEYDRVLSNLTR--PGQISIPVQTKYGYEIFKLIAYKPVT 368
Query: 280 GEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
+ + + Q T + A+ +++L
Sbjct: 369 TKSLQEVENIIMDQLTSDMAQAKYAQVLEQL 399
>gi|120611614|ref|YP_971292.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
gi|120590078|gb|ABM33518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
Length = 265
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 53/309 (17%), Positives = 103/309 (33%), Gaps = 57/309 (18%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + + + + A++ I +NG+ + +R+ +LK Q
Sbjct: 5 MKKKLLSGLVAAAVLGTSALPAIAQNI-AVVNGKAVP----KERVEVLKQQVERSGRPIT 59
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E+E +E+I + QE +K G+ N + + AR T L E F
Sbjct: 60 PEIEGQIKEEVIAREIFLQEAQKRGLEGSQNVKDQM--ELARQTILIRELF--------- 108
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIP 188
D+ + +I A K + T +EY +L
Sbjct: 109 --------------------ADYQKANPVTDADIQAEYDKFVAANTGKEYKASHILVETE 148
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-Q 247
D ++K K + ++ + G + S +F +
Sbjct: 149 DQAKSIIASIKKGAKFEDIAKKQSKDPG----------SGARGGDLDWATPSSYVSEFTE 198
Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
L+K + T P TQ G I + D R+ ++ + AQ ++ A++ +
Sbjct: 199 ALVKLDKGKMTQTPVKTQFGWHVIRLDDVRE--AKLPKLDEVKAQIAQQLQQQKLAKFQE 256
Query: 307 KLRSNAIIH 315
LR+ A +
Sbjct: 257 DLRAKAKVE 265
>gi|315223421|ref|ZP_07865278.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
ochracea F0287]
gi|314946594|gb|EFS98585.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
ochracea F0287]
Length = 471
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/330 (12%), Positives = 102/330 (30%), Gaps = 27/330 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAM--SSRIRTTINGEVITDGDISK 58
+ ++ ++ F+ + VL+I ++ + + +I + DI K
Sbjct: 9 IITERLKLITKFMNKTKIWSVLVILLFTTPFFAQNNERRKVDGVAAVVGDYLILESDIDK 68
Query: 59 RIALLKLQKINGELEK----IAVQELIVETLKKQEIEKSGITFDSNTV----NYFFVQHA 110
A + LQ+ + + + +L+ + L + + + + V N
Sbjct: 69 --AYIDLQQQEVDTREINRCQMLGKLMEDKLYAHQAVQDSVKLTDSEVRDQVNQRIEFLT 126
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYL----AIQSIWPDVVKNDFMLKYGNLEMEIP-- 164
G + F K + + L + + +K + E+
Sbjct: 127 AQLGGDIKKLLEFYKKD--DEQSMRDELFNLLKVSMLAQR-MKQQIIKDIEVTPEEVRTF 183
Query: 165 --ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A + E I ++ + K Q + + + D ++ +
Sbjct: 184 FNAIPADERPHFGTELEIAQIVVNPVAPKSSVQKVINQ-LNDIKKDVEENGMSFSTKAIL 242
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
S+ + S F+++ + + P+ + G I + R G E
Sbjct: 243 YSQDRATGGQVLTFNRNSAFDKAFKDVAFTLREGEISKPFESSFGWHIIQMDKIR--GKE 300
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
++++ L P + E + K+R
Sbjct: 301 VSVRHILLMPEIPQEALNEAKEKIAKIRDR 330
>gi|296107448|ref|YP_003619148.1| peptidyl-prolyl cis-trans isomerase D [Legionella pneumophila
2300/99 Alcoy]
gi|295649349|gb|ADG25196.1| peptidyl-prolyl cis-trans isomerase D [Legionella pneumophila
2300/99 Alcoy]
Length = 624
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + + L + I F + + Y S + +N + IT
Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
+ Q+ L+ + ++I + Q K G N V Q
Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ SA+ + L F+ + +
Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGML 154
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 84/216 (38%), Gaps = 24/216 (11%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-----KNDFMLKYGNLEM 161
+ + +S +D S+ ++ H K+++ + + D V +K E+
Sbjct: 194 DRFEQQAKISEDDIKSYYNQ------HHKKFMTSEQVTLDYVLLTMHDIKSQIKISPDEI 247
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + K +T ++ + +LF++P+N + + + A+E L K + +K
Sbjct: 248 KSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQ--DSIKQKADEVYSDLKKHPEQFDK 305
Query: 222 FASKIHD-----VSIGKAQYLL--ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + D + G ++ +++ NL + + P T+ G E +
Sbjct: 306 YVASKSDDKLSIANKGILPWITGGQNEYGRVLSNLTR--PGEISTPVQTKYGYEIFKLIA 363
Query: 275 KRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
+ + + + + Q T + A+ +++L
Sbjct: 364 YKPVTTKSLQEVENIIKDQLTSDMAQAKYAQVLEQL 399
>gi|323697783|ref|ZP_08109695.1| hypothetical protein DND132_0363 [Desulfovibrio sp. ND132]
gi|323457715|gb|EGB13580.1| hypothetical protein DND132_0363 [Desulfovibrio desulfuricans
ND132]
Length = 370
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 85/291 (29%), Gaps = 36/291 (12%)
Query: 41 RIRTTINGEVITDGDIS-KRIALL------------KLQKINGELEKIAVQELIVETLKK 87
I +NG I + + KL++ GE + +LIV+ L
Sbjct: 26 GIVARVNGAPIHLSQLEFQHDQFQEDSVGAYVPSVEKLRREYGE----ILSDLIVQELVV 81
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
QE+ + ++ + + A F L ++ I ++ L
Sbjct: 82 QELARRDLSVTDEELRK--AEDAVRADYPEGAFDQVLVEEYIDLKSWRTQLRYYLAQKKF 139
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + E + YL ++ + + +
Sbjct: 140 FQQVLRPQIKIDYKEAEKYYRDH---ISDFYLPESMRILVVRGPSRELVVKAVDKYLKDH 196
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
++ L ++E +V + E L ++ L ++ + G
Sbjct: 197 DQMSLATAFGEVET-----REVVVR------EGRLSAPWRTALTGLKPGQASDVLTDRFG 245
Query: 267 VEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E + + ++ + +AY + K+E E++ + A I
Sbjct: 246 FEALVLLERSEAKVLPPAQAYPLVEEALLEKKMESAFEEWLSATLAKADIQ 296
>gi|315283321|ref|ZP_07871537.1| foldase protein PrsA [Listeria marthii FSL S4-120]
gi|313613042|gb|EFR86968.1| foldase protein PrsA [Listeria marthii FSL S4-120]
Length = 292
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 101/299 (33%), Gaps = 42/299 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + + T +G+V T ++ +K + + ++++
Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGNVVKTDSGDV-TKDEL---YDAMKDKYGSEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + FS+ L + G+ + FK
Sbjct: 57 TFEKVLSDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKSFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + ++ + + + +NK +
Sbjct: 104 SQLKYNM----LVQKATEANTDTSD----KALKEYYKTWQPDITVSHI-LVADENKAKEV 154
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KS 253
K + D E + GK + + P F+ K+
Sbjct: 155 EQKLKDGAKFADLAKEYSTDTATKE---------NGGKLEPFGPGKMDPAFEKAAYALKN 205
Query: 254 QNNTTNPYVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ + + P TQ G I + + D + ++YL +Q T ++K + K
Sbjct: 206 KGDISAPVKTQYGYHIIQMDEPATKTTFDKDKKAVKESYLQSQLTTENMQKTLKKVYKD 264
>gi|254242564|ref|ZP_04935886.1| hypothetical protein PA2G_03316 [Pseudomonas aeruginosa 2192]
gi|126195942|gb|EAZ60005.1| hypothetical protein PA2G_03316 [Pseudomonas aeruginosa 2192]
Length = 272
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGVAIGE-DLLAR----ELQYHPADSYALALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ + G ++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLG 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + A +A ++A +++ +Y+ L +A I +
Sbjct: 217 REGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 261
>gi|90961451|ref|YP_535367.1| peptidylprolyl isomerase [Lactobacillus salivarius UCC118]
gi|227890540|ref|ZP_04008345.1| peptidylprolyl isomerase [Lactobacillus salivarius ATCC 11741]
gi|122449241|sp|Q1WUQ1|PRSA_LACS1 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|90820645|gb|ABD99284.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus salivarius
UCC118]
gi|227867478|gb|EEJ74899.1| peptidylprolyl isomerase [Lactobacillus salivarius ATCC 11741]
Length = 296
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 42/256 (16%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
+ I IV A S+ T +G IT+ + + K +Q++I+
Sbjct: 6 LVAISGIVLTFGLAACSKTVATTSGGKITESEYYSSMK-------KTSSGKQVLQQMILN 58
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ ++E G VN + + + G S F S L + + + FKQ + +
Sbjct: 59 KVLEKE---YGSKVSDKKVNEQYNTYKKQYGSS---FDSVLAQNDMTKSSFKQEIRSNLL 112
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ VK++ + K +EY P + + +K
Sbjct: 113 LKEAVKDNTKIT------------NKQLKAQWKEYE--------PKVTVAHILVSKKSTA 152
Query: 204 DAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES------DLHPQFQN-LLKKSQN 255
+ ++L+ +K A K D S L + L F+ Q
Sbjct: 153 EDIINKLKEDGSYANFKKLAKKYSTDSSTKNDGGKLAAFDNTDTSLDSTFKKAAFGLKQG 212
Query: 256 N-TTNPYVTQKGVEYI 270
+ TT P T+ G I
Sbjct: 213 SFTTEPVKTEYGYHVI 228
>gi|309791442|ref|ZP_07685948.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris
trichoides DG6]
gi|308226521|gb|EFO80243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris
trichoides DG6]
Length = 363
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 84/253 (33%), Gaps = 38/253 (15%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETL 85
+P+ S+ T + VIT G+ + G+ +++LI L
Sbjct: 89 TALPLPQAIGDVTSTEPITQVGDAVITRGEFVR-------AYQPGDEVSAVLKQLIQVEL 141
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
Q+ G+T +++ ++ + G + E+F++ L + +
Sbjct: 142 LLQQAGVEGVTVEASELDAEIAAIKSSFG-TPEEFTAMLAAN---------QIESEEAMR 191
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+++ + ++ +K + + T+ + R +L + V R +A
Sbjct: 192 SIIERNMLI-----------DKMVLSHTTMEQVHARHILLAT------TAETVDARKAEA 234
Query: 206 EE--SRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
E ++++ D +L S+ G + F + Q +
Sbjct: 235 EAILAQIQGGADFAQLAAEKSEDPGSKDKGGDLGWAGRGMFVGPFDEAVFSMQKDEVRLV 294
Query: 262 VTQKGVEYIAICD 274
T G I + D
Sbjct: 295 QTDFGWHIIQVLD 307
>gi|213962588|ref|ZP_03390850.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
sputigena Capno]
gi|213954914|gb|EEB66234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
sputigena Capno]
Length = 451
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 96/314 (30%), Gaps = 31/314 (9%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK--- 74
+ V+++F + + +I + DI K A + LQ+ + +
Sbjct: 8 SILVMLLFTTPFFAQNNERKKVDGVAAVVGDYLILESDIDK--AYIDLQQQEVDTREINR 65
Query: 75 -IAVQELIVETLKKQEIEKSGITFDSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +L+ + L + + + + V N G + F K
Sbjct: 66 CQMLGKLMEDKLYAHQAVQDSVKLTDSEVRDQVNQRIEFLTAQLGGDIKKLLQFYKKD-- 123
Query: 130 GDNHFKQYL----AIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIR 181
+ + L + + +K + EI A + E I
Sbjct: 124 DEQSMRDELFNLLKVSMLAQR-MKQQIIKDVEVTPEEIRTFFNAIPADERPHFGTELEIA 182
Query: 182 TVL--FSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
++ P + +Q + KD EE+ + S+ +
Sbjct: 183 QIVVNPVAPKSSVQKVIDQLNDIKKDVEENGMSFSTK----AILYSQDRATGGQVLTFNR 238
Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
S F+++ + + P+ + G I + R G E++++ L + P +
Sbjct: 239 NSAFDKAFKDVAFTLQEGEISKPFESSFGWHIIQMDKIR--GKEVSVRHILLMPDIPEEA 296
Query: 298 EKHEAEYVKKLRSN 311
E + K+R
Sbjct: 297 LNEAKEKISKIRER 310
>gi|126649428|ref|ZP_01721669.1| peptidylprolyl isomerase [Bacillus sp. B14905]
gi|126593753|gb|EAZ87676.1| peptidylprolyl isomerase [Bacillus sp. B14905]
Length = 326
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 89/272 (32%), Gaps = 37/272 (13%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T L + V + S S I T+ G+ I+ D +++ L
Sbjct: 3 KTVLSLTLAASVLALGACSGGDSKAIVTSKVGD-ISVADFNEKAKSLT--------GSYV 53
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q+L+ E + + + A G + F+ L + G+ + FK
Sbjct: 54 LQQLVTEKVLSD-----KYEVTDKELKEAYDTTASQFG---DGFAQALAESGLTEQGFKD 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
L +Q + +K+ + + + E R +L + ++ +
Sbjct: 106 SLRVQLLQEKALKDQAIKEEDVKKYYEQMK---------TELNGRHILVA---DEKTAKE 153
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-N 255
++K A+ + + + + G+ + + +F + + N
Sbjct: 154 AIEKIKGGAKFADVAKEYSTDTASAQ-------NGGELGWFSVGSMVDEFNDAAYALELN 206
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ P + G I I DKRD+ A K
Sbjct: 207 TLSEPVKSSFGYHVIEITDKRDVKDVGAFKDE 238
>gi|54297774|ref|YP_124143.1| hypothetical protein lpp1825 [Legionella pneumophila str. Paris]
gi|53751559|emb|CAH12977.1| hypothetical protein lpp1825 [Legionella pneumophila str. Paris]
Length = 624
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + + L + I F + + Y S + +N + IT
Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
+ Q+ L+ + ++I + Q K G N V Q
Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ SA+ + L F+ + +
Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQNEVRQGML 154
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 84/216 (38%), Gaps = 24/216 (11%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-----KNDFMLKYGNLEM 161
+ + +S +D S+ ++ H K+++ + + D V +K ++
Sbjct: 194 DRFEQQAKISEDDIKSYYNQ------HHKKFMTSEQVTLDYVLLSMHDIKSQIKISPDQI 247
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + K +T ++ + +LF++P+N + + + A+E L K + +K
Sbjct: 248 KSYYEENKSNYLTPAQWRVAHILFAVPENATKEEQ--DSIKQKADEVYSDLKKHPEQFDK 305
Query: 222 FASKIHD-----VSIGKAQYLL--ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + D + G ++ +++ NL + + P T+ G E +
Sbjct: 306 YVASKSDDKLSITNKGILPWITGGQNEYGRALSNLTR--PGQISIPVQTKYGYEIFKLIA 363
Query: 275 KRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
+ + + + + Q T + A+ +++L
Sbjct: 364 YKPVTTKSLQEVENIMKDQLTSDMAQAKYAQVLEQL 399
>gi|255262339|ref|ZP_05341681.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62]
gi|255104674|gb|EET47348.1| ppic-type ppiase domain protein [Thalassiobium sp. R2A62]
Length = 281
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 94/306 (30%), Gaps = 55/306 (17%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-ISKRIALLKLQKI--NG 70
+ ++ P+++ + A + TING IT G I R L + +
Sbjct: 5 TMFLASAASVVTLAAPVLAQDTTA--DTVVATINGTDITVGHMIITRAQLPQQYQQFPPD 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGI 129
L + +LI +TL Q ++ N + + L A + + L +
Sbjct: 63 VLFSGILDQLIQQTLLSQSLK--------NETDRMMLSLENERRSLRAGEVITNLTGNAV 114
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ ++ + ++ E E EY +L +
Sbjct: 115 TEEA--------------IQAAYDARFSGAEPE-------------TEYNASHILVETLE 147
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQN 248
+ Q ++ AE + + ++ + G+ + + P
Sbjct: 148 EAVAVQAEIEAGADFAEVAAEK-----------STGPSGPNGGQLGWFGPGMMVAPFEAA 196
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+++ + P TQ G I + + R E L + + + + +L
Sbjct: 197 VVEMEVGTLSGPVETQFGFHIITLNETR--VKEAPAIETLRPELEAELQQSAIEDKITEL 254
Query: 309 RSNAII 314
R A I
Sbjct: 255 REAAEI 260
>gi|300214306|gb|ADJ78722.1| Foldase protein prsA [Lactobacillus salivarius CECT 5713]
Length = 296
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 42/256 (16%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
+ I IV A S+ T +G IT+ + + K +Q++I+
Sbjct: 6 LVAISGIVLTFGLAACSKTVATTSGGKITESEYYSSMK-------KTSSGKQVLQQMILN 58
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ ++E G VN + + + G S F S L + + + FKQ + +
Sbjct: 59 KVLEKE---YGSKVSDKKVNEQYNTYKKQYGSS---FDSVLAQNDMTKSSFKQEIRSNLL 112
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ VK + ++ A +EY P + + +K
Sbjct: 113 LKEAVK----DNTKITDKQLKAQ--------WKEYE--------PKVTVAHILVSKKSTA 152
Query: 204 DAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES------DLHPQFQN-LLKKSQN 255
+ ++L+ +K A K D S L + L F+ Q
Sbjct: 153 EDIINKLKEDGSYANFKKLAKKYSTDSSTKNDGGKLAAFDNTDTSLDSTFKKAAFGLKQG 212
Query: 256 N-TTNPYVTQKGVEYI 270
+ TT P T+ G I
Sbjct: 213 SFTTEPVKTEYGYHVI 228
>gi|229190961|ref|ZP_04317951.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
gi|228592359|gb|EEK50188.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
Length = 303
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ K
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---FKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
++L NA I
Sbjct: 278 TRELLKNADI 287
>gi|107027409|ref|YP_624920.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116693880|ref|YP_839413.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
gi|105896783|gb|ABF79947.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116651880|gb|ABK12520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
Length = 276
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 58/311 (18%), Positives = 100/311 (32%), Gaps = 63/311 (20%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--EKIAVQ 78
+L I + +S A ++ T+NG IT D+ LL+ +
Sbjct: 10 LLTIVALAGALSGPVHAQTAETVATVNGTPITQADVDT---LLRASGQPDSPQIRQAIKN 66
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGDNHFKQY 137
+LI L +Q EK+ D V + ++AE + + +
Sbjct: 67 QLITRVLVQQAAEKANY-ADKPEVKAAM----QQAKVTAEVQL------------YLRDH 109
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + + VK + E+ A K EY R ++ P
Sbjct: 110 VKPEPVTDEQVKARY--------DELVAALGKN------EYKPRVIVVKDPVAAATV--- 152
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLL---------ESDLH-PQF 246
S L+ K + L + S + G+ ++ + L P
Sbjct: 153 ---------LSELKAGKSFDGLARQYSLAPSRDTGGELPWVSFNTPAAEGKTAGLPLPVA 203
Query: 247 QNLLKKSQNNTTNPYVTQKGV-EYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAE 303
Q L K + TT + GV + + KR + G K L Q EK A+
Sbjct: 204 QALEKLTVGATTKDSIPVDGVRAIVKLDAKRPTQVPGFETAKPTLQQQLQAIAAEKASAQ 263
Query: 304 YVKKLRSNAII 314
+ L +A I
Sbjct: 264 MIGNLLKDAKI 274
>gi|304394142|ref|ZP_07376065.1| peptidylprolyl isomerase PrsA1 [Ahrensia sp. R2A130]
gi|303293582|gb|EFL87959.1| peptidylprolyl isomerase PrsA1 [Ahrensia sp. R2A130]
Length = 277
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 84/272 (30%), Gaps = 48/272 (17%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+ LT + + +V+ + A +I + E IT ++ + +A + Q
Sbjct: 1 MNKLTFRSAVAASTLALLVALPASAQEDKIVAKVGSEEITQSELDQAMADMAQQFAQFPE 60
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ + A+ LI + K GI D L L+K+ +
Sbjct: 61 PQRKARALDALIDIEVFAALARKEGIDKDPK--------LLARMEL--------LNKRAL 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ +F Q + + +++ +K+ +E R +L +
Sbjct: 105 HNGYFTQKVQAGI--------------TDEQLQARYDKEIGSAPRQKEVKARHILVKTEE 150
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN 248
+ + D +L K S G + + + P+F+
Sbjct: 151 EAKAIIEEL------------KSGADFVELAKTKSTGPSGPQGGDLGFFKKGQMVPEFEK 198
Query: 249 -LLKKSQNNTT-NPYVTQKGVEYIAICDKRDL 278
+ T P TQ G I + + RD
Sbjct: 199 AAFELEAGKVTETPVKTQFGFHIIKVDETRDT 230
>gi|295694759|ref|YP_003587997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus tusciae DSM
2912]
gi|295410361|gb|ADG04853.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus tusciae DSM
2912]
Length = 305
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 102/308 (33%), Gaps = 32/308 (10%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----EL 72
+ +F + + + SS + T +G + ++ K+ L +L +
Sbjct: 4 SRLAGALFVTLLAILALAGCGSSDVVATFDGGQVHRAELDKQFKLQRLLIAPQYPDTPQN 63
Query: 73 EKIAVQELIV--ETLKKQEIEKSGITFDSNTVNYFFVQHARN----TGLSAEDFSSFLDK 126
+Q+ IV + L Q+ ++ GIT + Q+ + +A+ + + +
Sbjct: 64 RLEVLQQYIVMHDIL-DQKAKQEGITVSDKELADTVAQYRQQLIQYVYGNADALNKKMAE 122
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G+ DN + + F + EI A + +Y I V
Sbjct: 123 LGLQDNDLQALARDDILAQKY----FAKHLSVSDEEIQAYYKDHPA----DYTIAKVAHI 174
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ K + + + +K +++ + + ++ + L + P
Sbjct: 175 LVKTKQEAEQVEARILKGESFAQIAKEVSLDPSKDQGGELPEGP-------LSQWVGPFQ 227
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+K ++P TQ G + + +R Q ++ E ++
Sbjct: 228 DAAMKLPIGQISDPVQTQFGWHILRVDSRRVEPLSQVKD-----QVKNKVMQMKEQQWFN 282
Query: 307 KLRSNAII 314
+ + +A I
Sbjct: 283 QAKQDAHI 290
>gi|94987556|ref|YP_595489.1| parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731805|emb|CAJ55168.1| Parvulin-like peptidyl-prolyl isomerase [Lawsonia intracellularis
PHE/MN1-00]
Length = 629
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 72/226 (31%), Gaps = 26/226 (11%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ ++ V F+ + + + + + L+ I + N +
Sbjct: 203 VNISADEVAKFYNESSEQFK-TPTELN--LEYLLITP-------------RSLANNQTID 246
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E +K+ K+ + + ++ P+N + + + ++ +
Sbjct: 247 DTTVSEYY-QKHKEDFKSPE--QIHAQHIVVFAPENSEPEVLKKAQEKINQAANAIKKGE 303
Query: 215 DCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272
D + + K S+ + + G + P F ++ + + P T G I +
Sbjct: 304 DFSSVAKKFSQDNVAQNGGDLGWFTYEQAVPAFADVAFSLTPGEISQPIQTPVGYHIIKL 363
Query: 273 CDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
DK+ + K + + K + ++ + A+I
Sbjct: 364 IDKKPEEIKSFDEVSKT-IQQRLAEDKASIELQDVLENV-QLALIE 407
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 63/210 (30%), Gaps = 17/210 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR---------IALLKLQ 66
+ F LII + ++NG+ IT ++ KR +
Sbjct: 14 VKIAFGLIIIVFIFWGIGTLSGGPEVEVVSVNGQSITIQELQKRCEEIEQNIRQNFPTIS 73
Query: 67 KINGE---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR----NTGLSAED 119
++++A Q+LI+ETL QE + G+ +
Sbjct: 74 AAEINTFRIKQLATQQLILETLVLQEANRIGLIITPIELRKTIESFPAFHNTEGKFDPAI 133
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
+ FL ++ HF+ + + ++ + E +YL
Sbjct: 134 YLQFLKERNDTPGHFESQIRTNLLINK-IQQEITAGAYISPTEAYDVYMYESATRTIQYL 192
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + + + + +E+ +
Sbjct: 193 LFPTEDYLNKVNISADEVAKFYNESSEQFK 222
>gi|89067389|ref|ZP_01154902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanicola
granulosus HTCC2516]
gi|89046958|gb|EAR53012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanicola
granulosus HTCC2516]
Length = 280
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 100/299 (33%), Gaps = 44/299 (14%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T + + + +S + T+NG IT G++ IA +L + +L
Sbjct: 4 TLRLLASATLAAGLSTAAVAQEASDVVATVNGTDITLGELI--IAKAQLPQQYQQLPDDV 61
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ + +V+ L +Q++ + V +++ +
Sbjct: 62 LFDGLVDQLIQQQLLSDQLDASPERVQLALKN----------------EERSLRAGEAIT 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ +++ + ++ + ++ + E + EY +L +
Sbjct: 106 RITEEAVSEEALQAAYEARFADAEPQ-------------TEYNASHILVETEEEA----- 147
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
+ E++R + ++ + G+ + E + +F + ++
Sbjct: 148 -----VALTEQARAEGADFAELARENSTGPSGPAGGELGWFGEGMMVQEFYDAVVALEPG 202
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + P TQ G I + + R E+ L + T ++ + + +L + A +
Sbjct: 203 DVSEPVQTQFGWHVIKLNETR--LSEVPPLESLRGELTSELQQQAVEDALAELEAGADV 259
>gi|323339608|ref|ZP_08079882.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus ruminis ATCC
25644]
gi|323093003|gb|EFZ35601.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus ruminis ATCC
25644]
Length = 304
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 90/287 (31%), Gaps = 30/287 (10%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
+ +++ A S+ T +G +T+ + + K +QE+I
Sbjct: 12 VAAASVLMTLSLAACGSKTVATTSGGKVTESEYYSSLK-------KTSSGKQVLQEMI-- 62
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L K ++ G V+ + ++ + G S FS+ L + + FK+ + +
Sbjct: 63 -LNKILDKEYGDKVTDKKVDAEYNKYKKQYGSS---FSTVLAQNNYTKSSFKKNIRSSLL 118
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + + + LE + + + +L + + ++K
Sbjct: 119 LHEALVANTKITDKMLEAQW--------KEYEPKITVAHILVAKKSDAEAIINELKKDGS 170
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNN-TTNPY 261
++L K + K ++ L F+ K Q TT P
Sbjct: 171 YKNFAKLAKEKSTDTGTKSNGGKLSA-----FDNTDTSLDSTFKKAAFKLKQGTFTTEPV 225
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
T G I G K L Q K Y++K+
Sbjct: 226 KTSYGYHIIYSVKNPGKGKMSDHKKELKDQIINAKASDSS--YMQKI 270
>gi|332521072|ref|ZP_08397530.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola
5H-3-7-4]
gi|332043165|gb|EGI79362.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lacinutrix algicola
5H-3-7-4]
Length = 676
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/387 (13%), Positives = 115/387 (29%), Gaps = 93/387 (24%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F +L + L+ F++ F + + + A + T+ + + L+
Sbjct: 25 IFATLKKIVFLMNFKFLIKCFYLYFATTLLANAQQEEVIFTVEDTPVLASE------FLR 78
Query: 65 LQKINGELEKIAVQE--------LIVETLKKQEIEKSGI--------------------- 95
+ N +L K Q+ I LK QE + +
Sbjct: 79 VYNKNLDLVKEESQKDVDGYLKLFIEYKLKLQEAKALNLDKKPSYIREFQGYKNQLSKNY 138
Query: 96 ----TFDSNTVNYFFVQHARNTGL---------------SAEDFSSFLD------KQG-- 128
V + + A + ++ L ++G
Sbjct: 139 LNDSKVTDALVEEAYARLANEIKASHILVKIDQDASPKDTLAAYNEILKLRERVVQEGYK 198
Query: 129 -----------IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN------KQKMK 171
I + A + ++P + K ++ M K K
Sbjct: 199 KVQSDVHNGKTIFAEDLGYFSAFKMVYP-FENAAYNTKVNDISMPFKTRFGYHVVKVFDK 257
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E + ++ +N + + KR++ E+ + + +
Sbjct: 258 RKSQGEITVAHIMI---ENDEEKIKEIYKRLEQGEQFQALAKQFSEDKSSSSKG------ 308
Query: 232 GKAQYLLESDLH-PQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G+ + L P+F+ + K+ + + P+ TQ G + + +K+ L +KA L
Sbjct: 309 GELKPFSGGQLSSPEFEAVAFAIKNPGDYSKPFKTQFGWHIVKLINKKPLPDFKEIKAEL 368
Query: 289 SAQNTPTKIEKHEAE-YVKKLRSNAII 314
+ K + VK L+ I
Sbjct: 369 INKIRRDSRSKVINDSRVKALKEKYKI 395
>gi|221640663|ref|YP_002526925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
gi|332559643|ref|ZP_08413965.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides WS8N]
gi|221161444|gb|ACM02424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
gi|332277355|gb|EGJ22670.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides WS8N]
Length = 284
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 88/280 (31%), Gaps = 48/280 (17%)
Query: 38 MSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + T+NG+ IT G I+ R L L A+ + I+E L +Q I
Sbjct: 31 TADTVVATVNGQDITLGHMIALRAG---LPDQYQSLPDDALFKGILEQLIQQAALAQSIE 87
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ LS + N + +L+ VV+
Sbjct: 88 GS----------VTKRDQLSLQ-------------NEERGFLSA-VAMRRVVEG----AV 119
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ + + EY +L ++ +K ++ + D
Sbjct: 120 TDEALQAAYDARFADAAPQTEYNASHILV-------SSEDEAKKLKEEID-----GGADF 167
Query: 217 NKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
L K S + G + + F++ ++K P TQ G + + +
Sbjct: 168 ATLAKEHSSDGAAANGGSLGWFGLGMMVKPFEDAVVKMKPGEVVGPIQTQFGWHLVKLNE 227
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R E + + ++ A ++ ++ + A I
Sbjct: 228 TR--IAEKPSLDDMRDELAGQIEQEAVARHIDEVTAKAEI 265
>gi|297538002|ref|YP_003673771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp.
301]
gi|297257349|gb|ADI29194.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp.
301]
Length = 262
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/295 (17%), Positives = 96/295 (32%), Gaps = 50/295 (16%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQELIVET 84
V I+S A ++ T+NG+ I D + A + QK++ ++++ +LI
Sbjct: 9 AVAILSLAPAAFAADAVATVNGKQIKQSVYDYIAKDAASRGQKVDDQVKQAITNKLIDSE 68
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L QE +K G+ ++ V + +R L++ F+ K I D K
Sbjct: 69 LVYQEAQKLGLDKQADYVAR--EELSRRELLTSAYLQDFVKKNPISDADTK--------- 117
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
A +Q K +EY R +L + K
Sbjct: 118 -------------------AAYEQYKKAYGDKEYSARHILVKTEAEAKDIIAQLGK---- 154
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTN-P 260
D KL K S G + + + F + + + + P
Sbjct: 155 --------GADFAKLAKEKSMDPGSKEKGGDLGWFSPATMVKPFSDAVAGLQKGAVSATP 206
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
TQ G I + D R + + +++ + + LR+ A I
Sbjct: 207 AQTQFGWHVIKLVDTR--SAQPLPYDKVKDGLQKNLQQRNLEKMMSDLRTKAKID 259
>gi|254420790|ref|ZP_05034514.1| PPIC-type PPIASE domain protein [Brevundimonas sp. BAL3]
gi|196186967|gb|EDX81943.1| PPIC-type PPIASE domain protein [Brevundimonas sp. BAL3]
Length = 309
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/307 (13%), Positives = 93/307 (30%), Gaps = 49/307 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKIN 69
L + + C K+ R + E + D+ + L +
Sbjct: 3 LLAAVLTVAACSRGGGDDKAPEPGDRPVARVQDETVWASDVKREAVAQGLVGEGEPLDVT 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+L + + E+I + L +E E+ + A+
Sbjct: 63 SDLFRRVLDEVIDQKLLAREAERRRLDASP---------LAQR----------------- 96
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ + + VV + ++ N+Q T E +R +L
Sbjct: 97 RLEATRERILGDMLVESVVNG----AISDQAVQTLYNEQLRLAKTSEEIRVRLIL---SR 149
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
K + + + + A + + + ++ +F S G Y + +
Sbjct: 150 TKPEAEAVIGILGQGASFEAVAMERSVDEATRF-------SGGDLGYSTLDVMPQAYAGA 202
Query: 250 L-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
L K +T P+ T+ G + + D+R +A Q + + +++L
Sbjct: 203 LRDKPAGSTVGPFQTEGGWAVLRVEDRRKESPPTLEQA--RPQIVRYLTYEGVRQLLEQL 260
Query: 309 RSNAIIH 315
R A +
Sbjct: 261 RGKAKVD 267
>gi|284035738|ref|YP_003385668.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
gi|283815031|gb|ADB36869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
Length = 458
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 101/313 (32%), Gaps = 23/313 (7%)
Query: 13 IKLLTTYFVLII---FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+K + + +L + F +P ++I ++ + D+ + Q
Sbjct: 1 MKKVISSVLLGLVGWFLTMPAFGQGQGVSLNKIIAKVDNYYVLRSDLEEAYQSYVGQNQT 60
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF---SSFLDK 126
+ ++ L++ + + E + D V+ + F + ++
Sbjct: 61 PPQKCQLLESLVINKMMLAKAEIDSVVVDDKIVDSELD---SRMQYMVQQFGSDKNIVEA 117
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQKMKNITVR----EYL 179
G K L Q VV+ ++ + ++ E
Sbjct: 118 YGKSLEMLKSELRSQVKDQKVVQKMQQKITTDVKVTPRDVRRFYDGIPKDSLPYIPAEVE 177
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+ ++ K Q + +++R+ D ++ R+ +D KL K S+ + G +
Sbjct: 178 VGQIVRFAKPTKEQ-KEVLRQRLLDMKK-RVEAGEDFAKLAKENSEDVGSAQNGGDLGFA 235
Query: 238 LESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+ F+ LK N ++ + G+ I + + R G E + L +
Sbjct: 236 KRGMMVAPFEGAALKLKPNQLSDVVESDFGLHLIQLIETR--GAEYHARHILLRPDYNRL 293
Query: 297 IEKHEAEYVKKLR 309
Y+ LR
Sbjct: 294 DVSGPTHYLDSLR 306
>gi|217031935|ref|ZP_03437437.1| hypothetical protein HPB128_3g54 [Helicobacter pylori B128]
gi|298736882|ref|YP_003729412.1| peptidylprolyl isomerase [Helicobacter pylori B8]
gi|216946404|gb|EEC25009.1| hypothetical protein HPB128_3g54 [Helicobacter pylori B128]
gi|298356076|emb|CBI66948.1| peptidylprolyl isomerase [Helicobacter pylori B8]
Length = 299
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 96/284 (33%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRPITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTEKLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKTKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + F + + N T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMALDFSKAAFALTPGNYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKI 295
>gi|146296230|ref|YP_001180001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409806|gb|ABP66810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 335
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 94/285 (32%), Gaps = 35/285 (12%)
Query: 39 SSRIRTTINGEVIT--DGDISKRI---------ALLKLQKINGELEKI----AVQELIVE 83
+R +NGE IT + I+ + A L + + E+ + LIV
Sbjct: 34 ENRAVAIVNGEKITKKEFSINYKSQIDYYGLDKAFLAQKVGSKTYEEQIKENVLDGLIVR 93
Query: 84 TLKKQEIEKSGITFDSNT---VNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYL 138
++ Q+ +K I + + Q+ GL F +L G ++ +K +
Sbjct: 94 QIELQQAKKRNIILTAQEKKAIEDQINQYKNDPQNGL---QFKQYLQTIGATEDEYKDQI 150
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDNKLQNQG 196
I +V F N + + + +LF + D+K +
Sbjct: 151 ----IKSQIVSKLFNELTKNQTASMFEIESYYNSHKTDYIKVKASHILFKVSDSKEETTK 206
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNL-LKKS 253
+ ++ ++ KL K S+ + G Y + ++ +F+++
Sbjct: 207 KK---KAEEVLQMIKNGQNFEKLAKKYSEDENTKQKGGDLGYFRKGEMVKEFEDVAFSLG 263
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ T G I + D++ L S T K +
Sbjct: 264 IGEISGIVKTSYGFHIIKVTDRKQLALNDVKDEIKSTIETQKKQQ 308
>gi|313681760|ref|YP_004059498.1| ppic-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum
kujiense DSM 16994]
gi|313154620|gb|ADR33298.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfuricurvum
kujiense DSM 16994]
Length = 280
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 100/295 (33%), Gaps = 41/295 (13%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISK------RIALLKLQ-KINGELEKIAVQELIVETL 85
S + S+ + T+NG+ IT +++K + L L EL ++ +IV+ L
Sbjct: 14 LGSISASAAVLATVNGDEITSDEVNKVLIEGTQGRLDSLSPDKQNELRHRIIEGMIVQNL 73
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ +K+GI L ++++ L+ + K LA + +W
Sbjct: 74 IYDDAQKTGI-------------------LDSKEYKQELE---TTIDRLKVQLAAK-VWE 110
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ + ++ N + I + R +L + +
Sbjct: 111 QEQFDAIKVDAKEVKAYFDTNPN--EFIDKEKIHARHIL--VRSKTQAQSIIASMKTLSG 166
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVT 263
+ + + + F+ G Y + F + ++ P +
Sbjct: 167 DRLKKEFM---AQAKLFSIGPSAARGGDLGYFPRGQMVASFNDAAFALKTGTVSSIPVQS 223
Query: 264 QKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
Q G I + D++ G A+K+++ + K ++ + + L A I Y
Sbjct: 224 QFGYHVIYVEDRKPAKKMGFDAVKSFIEQRLKMDKFKETMEKKMAALHEKAKITY 278
>gi|218892241|ref|YP_002441108.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa
LESB58]
gi|218772467|emb|CAW28249.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa
LESB58]
Length = 621
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 53/405 (13%), Positives = 120/405 (29%), Gaps = 97/405 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + S + +NG+ I+ ++ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105
+ + LQ++ + L++ A++ LI TL Q + F ++
Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120
Query: 106 ---------------FVQHARNTGLSAEDFSSFL-------------------------- 124
F Q R S F L
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180
Query: 125 --------------------DKQGIGDNHFK-------------QYLAIQSIWPDVVKND 151
K + ++ K + + ++ + ++ K+
Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSEDEVKAFYEGHKSEFMTPEQVVVEYV--ELKKSS 238
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F + + ++ A QK + +L + N + +I + + +
Sbjct: 239 FFDQVKVKQEDLEALYQKEIANLSEQRDAAHILIEV--NDKVGDEQAKAKIDEIKARLAK 296
Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269
++F+ I + G Y P F+ L Q + P T G
Sbjct: 297 GEDFAALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHL 356
Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
I + + ++ +LK L + +E+ E K L S+A
Sbjct: 357 IKLLGVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSA 401
>gi|323489424|ref|ZP_08094653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planococcus
donghaensis MPA1U2]
gi|323396918|gb|EGA89735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planococcus
donghaensis MPA1U2]
Length = 296
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 96/273 (35%), Gaps = 31/273 (11%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
+GE I D+ +++ + + A+Q L++E + +K V+ +
Sbjct: 25 DGEAIVTSDVGDITKNDLYEEMKTSIGEQAIQILLIEKV---LADKY--EVTDKEVDAEY 79
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ G S ++F L + + +K+ + + + + + EI
Sbjct: 80 DSNKEELGESFDEF---LAQNNQTEESYKKVIRLNL----LQEKALTEGVEVTDEEI--- 129
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Q + E R +L + ++ ++ + A+ ++L +
Sbjct: 130 -QDYYDRQGTELNARHILVA---DEETANSLKKQLDEGADFAKLAEENSTDTG------- 178
Query: 227 HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL- 284
+ G + + P+F+ + + P ++ G I + +KR + + AL
Sbjct: 179 SGANGGNLDWFGPGAMVPEFEEAAYGLEVDEISEPVASEYGFHIIQVLEKRQIEDQPALE 238
Query: 285 --KAYLSAQNTPTKIEKHE-AEYVKKLRSNAII 314
K L + +K ++ V +L A +
Sbjct: 239 DQKEELRTELALSKADQTTLLPKVAELMKEANV 271
>gi|317153443|ref|YP_004121491.1| hypothetical protein Daes_1733 [Desulfovibrio aespoeensis Aspo-2]
gi|316943694|gb|ADU62745.1| hypothetical protein Daes_1733 [Desulfovibrio aespoeensis Aspo-2]
Length = 372
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 30/312 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ + V ++F ++ S I +NGE I + + +++ + G +
Sbjct: 1 MFRKFAVFMVFILLAGCSDTV--DEIGIVARVNGEPIYLSQLEFQHDQFQVETVGGYVPS 58
Query: 75 ---------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ ELIV+ L QE+ I + + + T F L
Sbjct: 59 VEKLKAEYGEILTELIVQELVVQELVNQDIGVTDHELLKAEEEV--RTDYPEGAFDQMLV 116
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
++ I ++ L + +E ++ ++ YL ++
Sbjct: 117 EEYIDLKTWRLQLRNHLAMRKFFHQVLRPQIKIDYLE---AERYYRDRISDFYLPESLRI 173
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + V K ++ R ++ E +V + E L
Sbjct: 174 LVVRGPSRE--IVGKAVEKFRAERDQVDLATAFGEVQ---TREVVLR------EERLSTI 222
Query: 246 FQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEA 302
++N L + + G E + + ++ +AY + K++
Sbjct: 223 WKNALTGLKAGQASGVLTDRFGFEILVLLERSPAKVLEPAQAYPLVEKALLEIKLQDAFD 282
Query: 303 EYVKKLRSNAII 314
+ + A I
Sbjct: 283 AWFSSTVARASI 294
>gi|77464749|ref|YP_354253.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|77389167|gb|ABA80352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 286
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 88/280 (31%), Gaps = 48/280 (17%)
Query: 38 MSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + T+NG+ IT G I+ R L L A+ + I+E L +Q I
Sbjct: 33 TADTVVATVNGQDITLGHMIALRAG---LPDQYQSLPDDALFKGILEQLIQQAALAQSIE 89
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ LS + N + +L+ VV+
Sbjct: 90 GS----------VTKRDQLSLQ-------------NEERGFLSA-VAMRRVVEG----AV 121
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ + + EY +L ++ +K ++ + D
Sbjct: 122 TDEALQAAYDARFADAAPQTEYNASHILV-------SSEDEAKKLKEEID-----GGADF 169
Query: 217 NKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
L K S + G + + F++ ++K P TQ G + + +
Sbjct: 170 ATLAKEHSSDGAAANGGSLGWFGLGMMVKPFEDAVVKMKPGEVVGPIQTQFGWHLVKLNE 229
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R E + + ++ A ++ ++ + A I
Sbjct: 230 TR--IAEKPSLDDMRDELAGQIEQEAVARHIDEVTAKAEI 267
>gi|228959094|ref|ZP_04120794.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229145438|ref|ZP_04273824.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|228638014|gb|EEK94458.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|228800603|gb|EEM47520.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 303
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 48/310 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L V+ + +S + S I TT +G I++ D +K+ LK
Sbjct: 20 RYSDLKRKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQ 75
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ V++++ + K V + G ++F+++++ G+
Sbjct: 76 NLSEMVVEKVLHDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVK 122
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ L + + +K E +I K+ + + +L
Sbjct: 123 NEDQLKEKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--- 166
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K IK+ +L +D L K S+ G+ + +F+
Sbjct: 167 -----DEKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFE 217
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEY 304
+ K + + P + G I + DK++L K + + +I+ + +
Sbjct: 218 DAAYKLEVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQV 277
Query: 305 VKKLRSNAII 314
+ L NA I
Sbjct: 278 TRDLLKNADI 287
>gi|15599066|ref|NP_252560.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas
aeruginosa PAO1]
gi|9950050|gb|AAG07258.1|AE004804_6 probable peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa PAO1]
Length = 272
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGMAIGE-DLLAR----ELQYHPADSYALALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ S G ++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLA 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + A +A ++A +++ +Y+ L +A I +
Sbjct: 217 REGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 261
>gi|153004233|ref|YP_001378558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
gi|152027806|gb|ABS25574.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
Length = 523
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 84/305 (27%), Gaps = 64/305 (20%)
Query: 54 GDISKRI---ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
D+ + + L + A+ +L+ L QE ++ GI ++
Sbjct: 69 YDLYQSQMGGGFTRELAAQLGLAEQALSQLVDRELVIQEAKERGIVVSDEELSSAIHAIP 128
Query: 106 ------------FVQHARNTGLSAEDF----------SSFLDKQG----IGDNHFKQYLA 139
+ AR S F L G + K+
Sbjct: 129 AFHRSGAFHFETYEAAARQNFGSPAKFESWYREQLLYGKMLAAVGETVKVSGAEVKEAWQ 188
Query: 140 IQ-----SIWPDVVKNDFMLKYGNLEMEIPA-------------NKQKMKNITVREYLIR 181
+ F + + E+ A + ++ +R
Sbjct: 189 ADADKLSLSFVRFPLAAFQAEVKPSDAEVKAFAEKDGARIEQFHKDNAARFDQQKKVRVR 248
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLE 239
VL + + +K+I++A +R++ + K+ S G ++ E
Sbjct: 249 HVLARV--TPGADDAAARKKIEEA-AARVKQGEAFEKVVAALSDDEGTKARGGDLGFVTE 305
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA----ICDKRDLGGEIALK--AYLSAQN 292
QF L Q + P + G + + K+ + L L Q+
Sbjct: 306 GLFDEQFAKAALALEQGQVSAPVRSASGWHLVKAEEVVPAKKVSLADARLDIARELLQQD 365
Query: 293 TPTKI 297
K+
Sbjct: 366 RARKL 370
>gi|317176991|dbj|BAJ54780.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter pylori
F16]
Length = 299
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 98/284 (34%), Gaps = 37/284 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G +IT D ++K + N + L++ + LI + ++
Sbjct: 41 SAGVLATVDGRLITKSDFD----MIKQRNPNFDFDKLKEKEKEALIDQAIR--------- 87
Query: 96 TFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A+ L S +F + + K+ ++ + +
Sbjct: 88 -------TALVENEAKTERLDSTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKI 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EM+ N K + +E R +L D + + K+ K +E++
Sbjct: 134 QIPEKEMQDFYNANKDQFFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELA 193
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 194 NRDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYL 251
Query: 273 CDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 252 ISKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295
>gi|227530453|ref|ZP_03960502.1| peptidylprolyl isomerase [Lactobacillus vaginalis ATCC 49540]
gi|227349631|gb|EEJ39922.1| peptidylprolyl isomerase [Lactobacillus vaginalis ATCC 49540]
Length = 310
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 88/284 (30%), Gaps = 34/284 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A S+ T +G IT + + K +Q++I
Sbjct: 6 LIAMIACATLVLPLAACGSKAVATTSGGKITQEEYYNEMK-------TTTNGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + ++E G VN + + G FS+ L +QG+ + KQ +
Sbjct: 59 LDKVLEKE---YGKQVSDKQVNAQYNTYKNQYG---SQFSAVLQQQGLTEKKLKQQIRSN 112
Query: 142 SIWPDVVKND---FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
V++ + + Q + + + ++++ + ++ + F
Sbjct: 113 LCLEAAVRSYTHITNAQINKQWKKYEPKVQTAEILVGSKDDAQSIIDQLNNSDHPYKTFK 172
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ + ++ + S D + KA + L K+ TT
Sbjct: 173 KLVKSKSTDASTKNAGGKVAAFDNTSTSVDSAYKKAAFKL-------------KTGEYTT 219
Query: 259 NPYVTQKGVEYIAI-----CDKRDLGGEIALKAYLSAQNTPTKI 297
P T G I + K+ + + +K
Sbjct: 220 EPVKTDDGYVVIYMIEHPAKGKKSQHINDLKTQIVQEKMNDSKF 263
>gi|167836282|ref|ZP_02463165.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
thailandensis MSMB43]
Length = 259
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 59/282 (20%), Positives = 94/282 (33%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I IA L Q LE+ QEL+ + QE K GI +
Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V V ++ L +++ DF+ K +
Sbjct: 84 DVKAQIV---------VAQQTAVL--------------------RALIE-DFLKKNQPSD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCN 217
E+ A ++ KN REY + +L DN+ Q + + K A E+ + KD
Sbjct: 114 AELKARYDELVKNAGGREYHLHHILV---DNEQQAKDLIAKIKGGAKFEDLAKQFSKDPG 170
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDK 275
+ + G + P+F ++ Q T P TQ G I + D
Sbjct: 171 SAK---------NGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDAPVKTQFGWHIIRVDDV 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + +K ++ Q K++ E LR A I
Sbjct: 222 RSITPPPFEQVKQQIAQQMVQQKLQTFEEG----LRQQAKIQ 259
>gi|134094945|ref|YP_001100020.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Herminiimonas arsenicoxydans]
gi|133738848|emb|CAL61895.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Herminiimonas arsenicoxydans]
Length = 258
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 98/297 (32%), Gaps = 52/297 (17%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKRIALLKLQKINGELEKIAVQELIV 82
+ VS AM+ + +NG+ + DI + + Q+ EL + +ELI
Sbjct: 8 LLVALFVSAALPAMAQNL-AVVNGKPVPSSRADIMIKQMAAQGQQDTPELRAMVKEELIN 66
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ QE +K G+ + V +A QS
Sbjct: 67 REILIQEADKLGLG-TNAEVKSQVE------------------------------IARQS 95
Query: 143 IWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
I + DF+ K + +I A + + +EY R +L ++
Sbjct: 96 ILIRALVADFLKKNPVKDADIKAEYDRFRAQASDKEYHARHILVEKEED----------- 144
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
A ++L+ +L K + + G + + F + ++ +
Sbjct: 145 -AKAIIAKLKGGAKFEELAKQSKDPGSADNGGDLDWAAPAAFVKPFSDAMVSLQKGQLYD 203
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + D R +I + Q +K + ++LR+ A I
Sbjct: 204 TPVKTQFGYHVIKLDDVR--AAKIPTLEEVKPQIAEGLQQKKLQAFQQQLRAKAKIQ 258
>gi|119385325|ref|YP_916381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
gi|119375092|gb|ABL70685.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
Length = 279
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 60/307 (19%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+L + + + + A + + T+NGE IT G + L Q G +
Sbjct: 1 MLKPLLAVSVLLSAAVPALPVLAQDADTVVATVNGEAITLGQMVAMRQGLDAQATQGLPD 60
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ + +++ + ++
Sbjct: 61 SALWDLMLDQMIRQTAVAQAAEPLSK---------------------------------- 86
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ------KMKNITVREYLIRTVLFSI 187
+ +A++ + + K E + K + EY +L
Sbjct: 87 -RDAVALEIEKRAYLAGSVLEKIAAAEPDEAELKAAYDQAFGGQAEPAVEYNAAHILVKT 145
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ + ++ + A+ L K + + G + + F
Sbjct: 146 REEA---EAIAKQLAEGADFGALAEEKSTDN--------SGPNKGDLGWFQPEQMVEPFA 194
Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT----KIEKHEA 302
+K + + P TQ G I + D R++ + Q K++
Sbjct: 195 EAVKALEKGQVSEPVETQFGWHVIKLNDTREVT--PPAFEEIKEQLAVQVRRDKVQAEIE 252
Query: 303 EYVKKLR 309
+ V + +
Sbjct: 253 KRVTEAK 259
>gi|78188012|ref|YP_378350.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium
chlorochromatii CaD3]
gi|78170211|gb|ABB27307.1| peptidyl-prolyl cis-trans isomerase SurA [Chlorobium
chlorochromatii CaD3]
Length = 438
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 87/250 (34%), Gaps = 27/250 (10%)
Query: 49 EVITDGDISKRIALLKLQ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ I DI++R A+L+ Q + + +Q ++ + L + +T +S V+
Sbjct: 39 DAIFQSDINRRAAMLRAQYPDLAKEQSVPRNILQGMVEQKLLVTKARLDSVTVESAQVD- 97
Query: 105 FFVQHARNTGLSAEDF--SSFLDKQ-GIGDNHFKQYLAIQSIWPDV---VKNDFMLKYGN 158
F +++Q G+ ++ + + + ++
Sbjct: 98 --ATTLERLRQIVARFPTKQAMERQLGMTLPALRESIREELTNQQLADKLRRKKTALASV 155
Query: 159 LEMEIPA---NKQKMKNITVREYLIRTVL---FSIPDNKLQNQGFVQKRIKDAEESRLRL 212
E+ A + + + + ++ P+++ + +Q ++ +
Sbjct: 156 TYDEVMAFYRDNRGQIAPADEQVSVSQIIKYAAVTPESRKEAAAVMQSIQQELQA----- 210
Query: 213 PKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
D +L + S+ S G ++ + L +F+ + + + T+ G+
Sbjct: 211 GADFGELARKYSQDPGSATSGGDLGFVRKGQLVARFEQVAFALKEGEVSEVVETRYGLHL 270
Query: 270 IAICDKRDLG 279
I + ++ D
Sbjct: 271 IQMLNRDDNS 280
>gi|126463590|ref|YP_001044704.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|126105254|gb|ABN77932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
Length = 284
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 88/279 (31%), Gaps = 46/279 (16%)
Query: 38 MSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + T+NG+ IT G I+ R L L A+ + I+E L +Q I
Sbjct: 31 TADTVVATVNGQDITLGHMIALRAG---LPDQYQSLPDDALFKGILEQLIQQAALAQSIE 87
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ LS + N + +L+ VV+
Sbjct: 88 GS----------VTKRDQLSLQ-------------NEERGFLSA-VAMRRVVEG----AV 119
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ + + EY +L ++ +K ++ +
Sbjct: 120 TDEALQAAYDARFADAAPQTEYNASHILV-------SSEDEAKKLKEEIDGGA----DFA 168
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
++ +S + G + + F++ ++K P TQ G + + +
Sbjct: 169 VLAKEHSSDGAAANGGSLGWFGLGMMVKPFEDAVVKMKPGEVVGPIQTQFGWHLVKLNET 228
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R E + + ++ A ++ ++ + A I
Sbjct: 229 R--IAEKPSLDDMRDELAGQIEQEAVARHIDEVTAKAEI 265
>gi|78776717|ref|YP_393032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas
denitrificans DSM 1251]
gi|78497257|gb|ABB43797.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurimonas
denitrificans DSM 1251]
Length = 277
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 100/300 (33%), Gaps = 41/300 (13%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI------ALLKL-QKINGELEKIAVQ 78
+ + + ++S++ ++NG IT D+ K + ++ + E K ++
Sbjct: 7 LVSSLALLSAISLSAQTLVSVNGTEITQQDVDKELMAATQGRFNQVPAEKQAEFRKQVLE 66
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+L+ + L + +K+G+ E+ + + K+ +
Sbjct: 67 QLVAKELVYDDAKKTGVLTSPE------------YKEKYEEVTQRIQKE----------I 104
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
AIQ + + N E++ + K + + R +L +
Sbjct: 105 AIQVWQKREID---KIAISNDELKKYYDANKEEFVENESVNARHIL--VEKESDAKNIIA 159
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+ + + + + + AS G Y + P+F +
Sbjct: 160 ELKPLKGDALKNKFMELAKSKSTCASA---AEGGDLGYFTAGQMVPEFNDKAFSMKAKEM 216
Query: 258 T-NPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P TQ G I I DK+ + +K+++ + K + +K+L A I
Sbjct: 217 TLEPVKTQFGYHVIYIEDKKAKATKNFTEVKSFIEQRLKMEKAKTVMLAKMKELEKKATI 276
>gi|226940617|ref|YP_002795691.1| signal peptide protein [Laribacter hongkongensis HLHK9]
gi|226715544|gb|ACO74682.1| Probable signal peptide protein [Laribacter hongkongensis HLHK9]
Length = 257
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 88/274 (32%), Gaps = 46/274 (16%)
Query: 46 INGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
ING I I + + Q L + A +++ L +QE K G+ + N
Sbjct: 26 INGTFIPQARIDSAVKQMTAQGQPDSPQLRQAARDRVVLTELLRQEAMKKGLDKSPDYRN 85
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
L + + + + ++ + V+ ++
Sbjct: 86 E----------------LENLQSALLANLYVRDFMKSHPVSEADVRAEY----------- 118
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ + +EY R +L + + ++K E+ + D
Sbjct: 119 ---DRMKVQMARKEYRARHILVPSQEEAAKVLEQLKK-GARFEDLARQYSIDTG------ 168
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGE 281
+ G ++ + L P+F + K ++ T P +Q G I + D ++ +
Sbjct: 169 ---SKANGGDLGFVDPAQLVPEFSGAMTKLAKGQITQTPVKSQFGWHIIQLTDTKE--AD 223
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ AQ + Y+ +L++ A +
Sbjct: 224 FPALDAVRAQLEQQIQGQRFDAYIARLKAQAKVQ 257
>gi|224536050|ref|ZP_03676589.1| hypothetical protein BACCELL_00914 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522333|gb|EEF91438.1| hypothetical protein BACCELL_00914 [Bacteroides cellulosilyticus
DSM 14838]
Length = 454
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 108/300 (36%), Gaps = 44/300 (14%)
Query: 20 FVLIIFCIVPIVSYKSW----AMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
F ++ C + +++ + + + + E I ++ + R+ AL + +K +G+
Sbjct: 7 FKFVVLCALALMTGSAVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRKFDGDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + I + V N + + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVAESEVIQRVDQMTNMYIANIGSREKMEEYFNKTSSQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L ++G+ +Q L + I P V+ F + IP
Sbjct: 127 IREALRENAREGLKVQRMQQKLVGEIKITPAEVRRHFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GK 233
+ ++ ++ P L+ V+ R+++ + R+ + + L + S +I G+
Sbjct: 176 TQVEVQ-IITQQPKIPLEEIEDVKSRLREYTD-RVNKGESFSMLARLYSDDRGTAINGGE 233
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ L P F N+ + N + ++ G I + +KR G+ ++ +
Sbjct: 234 MPFTGRGYLDPAFANVAFNLQDPNKVSKIVESEYGFHIIQLMEKR---GDRIKVRHILLK 290
>gi|146299709|ref|YP_001194300.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacterium
johnsoniae UW101]
gi|146154127|gb|ABQ04981.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacterium
johnsoniae UW101]
Length = 475
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 94/302 (31%), Gaps = 19/302 (6%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK----IAVQE 79
+ P I T+ ++ D DI K L++ G ++ + +
Sbjct: 38 VVAEKPAEPVHGKQKIDGIIATVGDYIVLDSDIDK--GYLEISSQGGNIKDITRCQMLGK 95
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD-KQGIGDNHFKQY- 137
L+ + L + + I V + D + ++ + FK Y
Sbjct: 96 LLEDKLYAHQAIQDSIIVSDAEVRGMMEERLNYMIQQVGDINKVVEYYKKSSVEEFKTYF 155
Query: 138 --LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT----VREYLIRTVLFSIPDNK 191
+ + +++ + E+ +K+ E + ++ P
Sbjct: 156 ADILKEQKLASEMRDKIVKDVEITPEEVRNFFRKIPKDELPTFGAEMEVAQIVVE-PKVS 214
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL-ESDLHPQFQNL- 249
+++ V R+ + L K ++ G + ++ +F+++
Sbjct: 215 KEDKQKVIDRLNAIRKDVLEGSSFATKAVLYSQDPGSAPNGGYYKMTRKTPFVKEFKDVA 274
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P+ T G I + + G E+ L+ L A K E + +R
Sbjct: 275 FSLQEGEISAPFETTFGYHIIMVDKIK--GQEVELRHILIAPTVSESALKEAKERIANIR 332
Query: 310 SN 311
+
Sbjct: 333 AK 334
>gi|146339244|ref|YP_001204292.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278]
gi|146192050|emb|CAL76055.1| putative Peptidylprolyl isomerase [Bradyrhizobium sp. ORS278]
Length = 308
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/317 (13%), Positives = 96/317 (30%), Gaps = 43/317 (13%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---Q 66
S I+ L ++ A + + T+NG I + +++ ++
Sbjct: 11 SLAIRTHFVVACLAASLGATEIARAEQASADPVIATVNGSEIHESELAMVDEIVGRNLPT 70
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ E ++ +I L + I D + ARN GL + +
Sbjct: 71 QDRIERRDTILKMMIDTILLSDIARERKI-VDEADIARR-TTFARNQGL-MTQLLREVGQ 127
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + + ++ + DVV E +R ++F
Sbjct: 128 RAVSEETVRK------AYEDVV--------------------LKAASEQTEVHLRHLVFL 161
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHP 244
D + A RL+ +D + S + G + + +L
Sbjct: 162 TKDAPDDAARKAIEARAQAALERLKKGEDFAAVATETSDDPVTKSRGGDFGWRIRPELSK 221
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKAYLSAQNTPTKIEKH 300
++ + + + + T G+ I + +R + + + + +IE
Sbjct: 222 EYADAAFEMKNGDISPLIKTGVGLHIIKLEDRRTRRPPEFDTVRERVAAMVSATAQIE-- 279
Query: 301 EAEYVKKLRSNAIIHYY 317
V K R+ A I +
Sbjct: 280 ---LVDKARAAAKIERF 293
>gi|229010444|ref|ZP_04167648.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048]
gi|228750864|gb|EEM00686.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048]
Length = 289
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 101/297 (34%), Gaps = 43/297 (14%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQ 78
++ +++ + SS +++T GDI+K +++ G K +
Sbjct: 4 AMLALAATSVIALSACGTSSS------DKIVTSKAGDITKEEFYNQMKTQAG---KQVLN 54
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++E + + D V+ F + + G + F + + +QG+ + K +
Sbjct: 55 NMVMEKVLIK-----NYKVDEKEVDKKFDEMKKQVG---DQFDTLMKQQGLKEETVKNGV 106
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
++ + ++ A + K +E +L + + + +
Sbjct: 107 RASLAQEQAIEK------AITDKDLKAKFEDYK----QEIKASHILVKDEETAKKVKEEL 156
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNT 257
+ K EE + +D EK G + + +F +K ++
Sbjct: 157 AQ-GKSFEELAKKYSEDPGSKEK---------GGDLGFFGPDKMVKEFDEAARKLKKDEV 206
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ P TQ G I + + KA + + K + + +K+++
Sbjct: 207 SEPVKTQHGYHIIKVTETHADATFDKAKADIKKEVVQEKTQDAQFMNDLMMKEIKKA 263
>gi|320536418|ref|ZP_08036455.1| basic membrane family protein [Treponema phagedenis F0421]
gi|320146728|gb|EFW38307.1| basic membrane family protein [Treponema phagedenis F0421]
Length = 361
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 27/208 (12%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---QKINGELEKI 75
VL + ++ +S + E IT G I R+ ++ +K++ +
Sbjct: 6 TAVLFFAVFLGFLTAQSALQPIAQISIQTREPITLGQIKSRVTAIEKELGKKLSTADRRR 65
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT------------------GLSA 117
+ I E L Q K GI + VN +F +S
Sbjct: 66 FMDSFIEERLFAQAAIKEGIRITDSEVNQYFNNILSQQMGKLTTEAEFADYIKETEKISL 125
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNI 173
+ + G+ +K +L Q V +F G + +I + + K I
Sbjct: 126 DQLMK--KQNGMTLAEYKAFLKTQLSTQRYVMQKKSAEFQKLKGPTDSQIRSYYELNKQI 183
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKR 201
R ++ L SIP N ++ +
Sbjct: 184 FFRPDTVKLFLVSIPKGNDPNAAKIKAK 211
>gi|307610560|emb|CBX00148.1| hypothetical protein LPW_18931 [Legionella pneumophila 130b]
Length = 316
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 46/154 (29%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + + L + I F + + Y S + +N + IT
Sbjct: 1 MLQKLNEHIQGVVAWLVIILIAITFTLFGVDYYFQSRQISDAKVIVNDKPITMQAFETNY 60
Query: 61 ALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
+ Q+ L+ + ++I + Q K G N V Q
Sbjct: 61 RRTRAQQDLPQMTAADEKNLQNQVLNQMITNEVSIQAARKYGFEVSPEQANAAIVQIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ SA+ + L F++ + +
Sbjct: 121 QEDGHFSAQRYQQALSGALFTPETFQKEVRQGML 154
>gi|289422639|ref|ZP_06424480.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L]
gi|289156939|gb|EFD05563.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L]
Length = 349
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 54/324 (16%), Positives = 109/324 (33%), Gaps = 47/324 (14%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGE---LEKIA 76
L + +++ + A S+ T+NG+ I+ +I ++ K ++ GE + A
Sbjct: 4 LASILLAAVIAVSTAACSNNEVATVNGKSISSKEIENQLKFQKWMMESQYGEEVWTQMEA 63
Query: 77 VQELIVETLKKQEI-------------EKSGITFDSNTVNYFFVQHARNTG--LSAEDFS 121
+ ET+KKQ EK+G+ D + L E
Sbjct: 64 QDKNYQETMKKQVATSVSRIRAFTDYAEKNGVKPDQKQ----LKEFQAQNKKMLEDEKMK 119
Query: 122 SFLDKQGIGDNHFKQYLAIQSIW---PDVVKNDFMLKYGNLEMEIPANKQKMKNI----T 174
+K G+ + + ++ + +K L+ N K K T
Sbjct: 120 KSFEKTGLDEKFLDDFAKEKATMVSLSEYLKKKSKPTEKELKDYYEKNSVKAKAAHILLT 179
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IG 232
+ + + P+ K + + K ++A + D +L K S+ + G
Sbjct: 180 TTDTNGKPL---SPEKKAEVKKKADKIYEEA-----KSGVDFKELAKKNSQDPGSAQNGG 231
Query: 233 KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ + + P+F+ + + + P TQ G I + + KA + A
Sbjct: 232 ELGEFGKGQMVPEFEKAVFSMKEGEISKPIETQYGYHIIKLEKITKSEFDKV-KAEMEAA 290
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315
+ K +K + A I
Sbjct: 291 LSQEKAQKLAQSIIDA----AKIQ 310
>gi|16801386|ref|NP_471654.1| hypothetical protein lin2322 [Listeria innocua Clip11262]
gi|46396988|sp|Q929F4|PRSA2_LISIN RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|16414834|emb|CAC97550.1| lin2322 [Listeria innocua Clip11262]
Length = 291
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 97/297 (32%), Gaps = 46/297 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LE 73
+ +L + ++ + S + + T +G D+++ ++ G ++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGNVVKTDSG------DVTQDELYDAMKDKYGSEFVQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ ++++ + K V+ F ++ G + FS+ L + G+ +
Sbjct: 55 QLTFEKILGDKYK----------VSDEDVDKKFKEYKSQYG---DQFSAVLAQSGLTEKS 101
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK L +V+ + ++ + + + +NK +
Sbjct: 102 FKSQLKYNL----LVQKATEANADTSD----KALKEYYKTWQPDITVSHI-LVADENKAK 152
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-- 251
K + D E + G+ + P F+
Sbjct: 153 EVEQKLKDGAKFADLAKEYSTDTATKE---------NGGQLAPFGSGKMDPAFEKAAYAL 203
Query: 252 KSQNNTTNPYVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
K++ + + P TQ G I + D + +AYL++Q T ++K +
Sbjct: 204 KNKGDISAPVKTQYGYHIIQMDKPATKTTFDKDKKAVKEAYLASQLTTENMQKTLKK 260
>gi|254511296|ref|ZP_05123363.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535007|gb|EEE37995.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium KLH11]
Length = 282
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 52/304 (17%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L +P+ + +S + +NG+ IT G + + L Q LE
Sbjct: 7 FLPSLALTAVLALPLAAETKP-DASTVVARVNGDEITLGHVIATASALPAQYQQ--LEDD 63
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE--DFSSFLDKQGIGDNH 133
+ + I+E L +Q + + + +N N S L + D
Sbjct: 64 VLFDFILEQLVQQHL----LGLEQEELNTASALRLENEARSLRAVQTVEALAAAAVTDEA 119
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
++ + ++ E E+ +L ++
Sbjct: 120 --------------IQAAYDAQFAEFE-------------GADEFNASHILVETEED--- 149
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+A +++L D +L K S + G + + P+F+N +L
Sbjct: 150 ---------ANALKTQLDEGADFAELAKENSTGPSGPNGGALGWFGTGQMVPEFENAVLS 200
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ ++P TQ G + + DKR + + + ++ + +L
Sbjct: 201 LEKGQVSDPVQTQFGWHLVTLNDKRKTQA--PELDAVRTELAQSIQQEAIQARIDELTQQ 258
Query: 312 AIIH 315
A I
Sbjct: 259 AQIE 262
>gi|218889849|ref|YP_002438713.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa LESB58]
gi|218770072|emb|CAW25834.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa LESB58]
Length = 272
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGVAIGE-DLLAR----ELQYHPADSYALALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ S G ++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLA 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + A +A ++A +++ +Y+ L +A I +
Sbjct: 217 REGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 261
>gi|146282422|ref|YP_001172575.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas stutzeri A1501]
gi|145570627|gb|ABP79733.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas stutzeri A1501]
Length = 618
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/402 (11%), Positives = 115/402 (28%), Gaps = 91/402 (22%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + + A +++ +NGE I+ D+ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVVLLALTGFDAIFNAASNAQNAAEVNGEEISRYDLDQAM 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q L A+ LI L Q + + F ++ +
Sbjct: 61 NMQRRQLAQQLGQDFDPSLLDDRLLRDAALGSLIDRMLLLQAAKGANFAFSREALDQLIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + + F + + G F+Q L + + + + + ++
Sbjct: 121 QTPEFQVDGAFNPARFDQVIQQMGYSRLQFRQLLEQEMLIGQL-RAGISGTGFVTDQQVQ 179
Query: 165 ------------ANKQKMKNITVREYLIRTV---------LFSIPDN------------- 190
A E + F P+
Sbjct: 180 NFARLEMQTRDFATLTVPAQHEAIEVSDEQINEFYEANADRFRTPEQVVVEYVELKKESF 239
Query: 191 ---------------KLQNQGFVQKRIK--------------DAEESRLRLPKDCNKLEK 221
+ Q ++R +A+ + E
Sbjct: 240 FDQVEASDEELQELYQKQIANLAEQRRAAHILIETGGELSDDEAKAKIDEIAARVKNGED 299
Query: 222 FASKIHDVS--------IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272
FA+ +VS G + P F++ L ++ + P ++ G I +
Sbjct: 300 FATVAKEVSQDPGSANEGGDLGFAGPGVYDPAFEDALYALNEGEVSAPVKSEFGWHIIKL 359
Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ ++ ++K L + ++E+ E K+L A
Sbjct: 360 LGVQSPEVPSFESMKPELVRELKAQQVEQRFVETSKQLEDAA 401
>gi|116049755|ref|YP_791438.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313110502|ref|ZP_07796387.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas
aeruginosa 39016]
gi|115584976|gb|ABJ10991.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas
aeruginosa UCBPP-PA14]
gi|310882889|gb|EFQ41483.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas
aeruginosa 39016]
Length = 621
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/405 (13%), Positives = 120/405 (29%), Gaps = 97/405 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + S + +NG+ I+ ++ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105
+ + LQ++ + L++ A++ LI TL Q + F ++
Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120
Query: 106 ---------------FVQHARNTGLSAEDFSSFL-------------------------- 124
F Q R S F L
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180
Query: 125 --------------------DKQGIGDNHFK-------------QYLAIQSIWPDVVKND 151
K + ++ K + + ++ + ++ K+
Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSEDEVKAFYEGHKSEFMTPEQVVVEYV--ELKKSS 238
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F + + ++ A QK + +L + N + +I + + +
Sbjct: 239 FFDQVKVKQEDLEALYQKEIANLSEQRDAAHILIEV--NDKVGDEQAKAKIDEIKARLAK 296
Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269
++F+ I + G Y P F+ L Q + P T G
Sbjct: 297 GEDFAALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHL 356
Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
I + + ++ +LK L + +E+ E K L S+A
Sbjct: 357 IKLLGVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSA 401
>gi|307129932|ref|YP_003881948.1| peptidyl-prolyl cis-trans isomerase D [Dickeya dadantii 3937]
gi|306527461|gb|ADM97391.1| peptidyl-prolyl cis-trans isomerase D [Dickeya dadantii 3937]
Length = 626
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 24/159 (15%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+ IT + + R ++ N +L K + +LI ETL
Sbjct: 42 AAKVNGQEITRAQLEQGVQNERSRQQEMLGENFSALAANEGYMQQLRKQVLSQLIDETLV 101
Query: 87 KQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q G+ V + N + + + + + G+ + + Q+L Q +
Sbjct: 102 VQYAHTLGLNISDEQVKQAIFSVPEFQTNNRFDNDKYLAQVRQLGLTPDAYAQFLRKQLL 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+++ GN + + + + ++ IRT
Sbjct: 162 TQQLIRG-----LGNTDFVLQQELDNLVAMASQDRTIRT 195
>gi|257094858|ref|YP_003168499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047382|gb|ACV36570.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 269
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 89/275 (32%), Gaps = 47/275 (17%)
Query: 45 TINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T+NG I+ + +A + Q EL+K +ELI L QE +K G+ +
Sbjct: 38 TVNGVAISQTVANAFVAEQQAQGAPDSPELKKAVREELIRRELLVQEAKKLGLDKKPD-- 95
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
A L +Q I Y+ V++ + E
Sbjct: 96 ------VAAQAD---------LARQAI-------YIRA------FVQDYVKKNPISDEQA 127
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A ++ + EY +R +L D+ ++K K E ++ +
Sbjct: 128 KAAYERMKSQMGSTEYKVRHILVEKEDDAKTIIVNLKKGAKFDELAKQSKDPGSKE---- 183
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQKGVEYIAICDKRDLGG 280
G + ++ F + + ++ T P T G I + D R L
Sbjct: 184 -------KGGDLGWSSTANYVKPFGDAVAGLAKGKFTETPVKTDFGYHVILVEDSRPLT- 235
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ Q ++ +YV +L+ A I
Sbjct: 236 -PPPFDQIKPQINQRLQQEQLQKYVAELQKKAKID 269
>gi|253687447|ref|YP_003016637.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754025|gb|ACT12101.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 626
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/322 (12%), Positives = 106/322 (32%), Gaps = 34/322 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ ++ + + ++ F + + Y +NG+ IT + + +
Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRAQLEQAV 59
Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ ++ +L + A+ +LI ETL Q K G+ +
Sbjct: 60 QNERSRQQEALGENFSLLASNDGYMQQLRRQALSQLIDETLLDQYANKLGLNISDEQIKQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
N E + + + G+ + + Q L Q +++ +GN
Sbjct: 120 AIFDVPAFQTNNRFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRG-----FGNSSF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+P + + ++ ++R I + ++++ + +
Sbjct: 175 LLPQEIDNLVKLAAQDRVVRVATIDIAAKAKAQTVADDEVQSYYDQNKGNFIAP-EEFKV 233
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ SI + ++ ++ + ++++N+ + P + V I K +
Sbjct: 234 SYITLDAASIMDGVKVDDAAIN----DFYEQNKNDYSQPERKKFSV----IQVKNEADAT 285
Query: 282 IALKAYLSAQNTPTKIEKHEAE 303
L A + T ++ +
Sbjct: 286 SVLDALKQGGDFATLAKEKSTD 307
>gi|257069381|ref|YP_003155636.1| SurA-like protein [Brachybacterium faecium DSM 4810]
gi|256560199|gb|ACU86046.1| SurA-like protein [Brachybacterium faecium DSM 4810]
Length = 269
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 68/176 (38%), Gaps = 12/176 (6%)
Query: 42 IRTTINGEVITDGDISK-----------RIALLKLQKINGELEKIAVQELIVETLKKQEI 90
+ T+NGE I+ + ++ + + L++ ++L+ L Q
Sbjct: 76 VVATVNGEDISKDEFTQIYESQFQQMAMQQQSTGEEVDQAALKQQVAEQLVDNHLLLQGA 135
Query: 91 EKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
++GI ++ + A+ GL SA++ S L++QG+ + ++ A Q + ++
Sbjct: 136 SEAGIEPTDEDIDATLEEIAQQNGLGSADEVVSTLEQQGMSEEDVREDAASQHMLTAYIE 195
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ ++ + E Q ++ + V Q V ++ +A
Sbjct: 196 QEADIEEPSEEELQAQYDQLVEQQSQAGGESSEVPPFEDVQDQLAQQTVAQQQNEA 251
>gi|218888106|ref|YP_002437427.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218759060|gb|ACL09959.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 630
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 68/210 (32%), Gaps = 17/210 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIALLKLQ----- 66
+ F +II V SS T+N + I + +++ L+ +
Sbjct: 14 VKIAFGIIILVFVFWGVGSMHNSSSGALATVNKKPILIQEFGREYERQVETLRSRYPGIT 73
Query: 67 ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-ARNTG---LSAED 119
L++ +Q +I E L E + G++ + A G AE
Sbjct: 74 AEDMKQMGLKRQVLQAMITERLLADEAARIGLSVSPVELRRSIESITAFRNGDGRFDAEV 133
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
+ S L Q F+ + + + ++ + E A + EY+
Sbjct: 134 YRSVLKGQQTSPGRFEDGIRRDMLLQKL-RDRVAAPASVTDEEARALFDYGRERRTIEYV 192
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + + ++ ++ ++ + R
Sbjct: 193 LFPLEDYVLKVTPTDEQIAERYNENMDAWR 222
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQ 235
R +LF + +++ + + ++L+ KD L S K G
Sbjct: 268 VHARHILFMAQEGASKDEDAAARAKAEDVIAQLKKGKDFASLAAKLSDDKGSGAQGGDLG 327
Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
+ + + P F+ + P + G I + + + AL + +
Sbjct: 328 WFTKGQMVPPFEEAAFALKPGEISAPVRSAFGWHVIKM-EAHETQRTRALD-EVRGEIRQ 385
Query: 295 TKIEKHEAEYVKKLRSNA 312
E+ +E + + A
Sbjct: 386 RLGEEKASERMHEALDTA 403
>gi|254479750|ref|ZP_05093031.1| PPIC-type PPIASE domain protein [Carboxydibrachium pacificum DSM
12653]
gi|214034310|gb|EEB75103.1| PPIC-type PPIASE domain protein [Carboxydibrachium pacificum DSM
12653]
Length = 271
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 73/249 (29%), Gaps = 35/249 (14%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+++ + L+ + L QE +K IT V + + F+S +
Sbjct: 46 VKENVLDSLVAQKLLVQEAKKKNITVTDKEVEEEYN--------KEKQFNSKVT------ 91
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
K+ + + ++ ++ + E+ + K + R +L
Sbjct: 92 ---KEQIREYLLIDKLL-AEYTKDVKVTDEELKKYYDEHKE-SFEVMRARHIL------- 139
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQN- 248
++ + RL +D L K S + G + P+F+
Sbjct: 140 -----VADEKTAEDIYQRLMKGEDFAALAKEYSIDTATKDNGGDLGEFPHGVMVPEFEEA 194
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ P TQ G I + S K + + +Y +L
Sbjct: 195 AFSLKLGEISKPVKTQYGYHIIKSEGITVKPFDEVKGTIESYLLNDKKNKVIKEKY-DEL 253
Query: 309 RSNAIIHYY 317
+ I +
Sbjct: 254 VKASKIQKF 262
>gi|56479153|ref|YP_160742.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum
aromaticum EbN1]
gi|56315196|emb|CAI09841.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum
aromaticum EbN1]
Length = 260
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 90/286 (31%), Gaps = 51/286 (17%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKS 93
A ++ T+NG I + I Q EL + A ++L+ + QE +
Sbjct: 20 AAGAATPVATVNGAPIPSSRMDVMINEQHAQGAPDGAELREAAREQLVRLEVLAQEAARK 79
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
GI + L +QG+ + DF+
Sbjct: 80 GIDKKP-EIQAQMD----------------LARQGV-------LIRAYM-------QDFV 108
Query: 154 LKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIK-DAEESRLR 211
+ ++ + +K + +EY R +L + G ++ K +A + +
Sbjct: 109 KTNPATDADLRKEYESIKGQMGSKEYKPRHILVETEEEAKAIIGKLRAGEKFEALATASK 168
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEY 269
P +K G+ + F ++K + + P + G
Sbjct: 169 DPGSKDK------------GGELGWSNPGMFVKPFSEAMVKLEKGQYSATPVKSDFGYHV 216
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D RDL + Q +K ++V LR+ A +
Sbjct: 217 IQLDDVRDLKA--PAFEEVKPQLEQRLQQKKIEKHVADLRAKAKVE 260
>gi|256820408|ref|YP_003141687.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
ochracea DSM 7271]
gi|256581991|gb|ACU93126.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Capnocytophaga
ochracea DSM 7271]
Length = 451
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/311 (12%), Positives = 94/311 (30%), Gaps = 25/311 (8%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK--- 74
+ V+++F + + +I + DI K A + LQ+ + +
Sbjct: 8 SALVILLFTTPFFAQNNERRKVDGVAAVVGDYLILESDIDK--AYIDLQQQEVDTREINR 65
Query: 75 -IAVQELIVETLKKQEIEKSGITFDSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +L+ + L + + + + V N G + F K
Sbjct: 66 CQMLGKLMEDKLYAHQAVQDSVKLTDSEVRDQVNQRIEFLTAQLGGDIKKLLEFYKKD-- 123
Query: 130 GDNHFKQYL----AIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNITVREYLIR 181
+ + L + + +K + E+ A + E I
Sbjct: 124 DEQSMRDELFNLLKVSMLAQR-MKQQIIKDIEVTPEEVRTFFNAIPADERPHFGTELEIA 182
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
++ + K Q + + + D ++ + S+ + S
Sbjct: 183 QIVVNPVAPKSSVQKVINQ-LNDIKKDVEENGMSFSTKAILYSQDRATGGQVLTFNRNSA 241
Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
F+++ + + P+ + G I + R G E++++ L P +
Sbjct: 242 FDKAFKDVAFTLREGEISKPFESSFGWHIIQMDKIR--GKEVSVRHILLMPEIPQEALNE 299
Query: 301 EAEYVKKLRSN 311
E + K+R
Sbjct: 300 AKEKIAKIRDR 310
>gi|251790644|ref|YP_003005365.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Dickeya zeae
Ech1591]
gi|247539265|gb|ACT07886.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya zeae
Ech1591]
Length = 626
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 24/159 (15%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+ IT + + R ++ N +L + +L+ ETL
Sbjct: 42 AAKVNGQEITRSQLEQGVQNERSRQQEMLGDNFSALAANEGYMQQLRGQVLSQLVDETLV 101
Query: 87 KQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q G+ V + N E + S + + G+ + + Q+L Q +
Sbjct: 102 VQYAHNLGLNISDEQVKQAIFSVPEFQTNNRFDNEKYLSQVRQLGLTPDAYAQFLRKQLL 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+++ GN + + + I ++ +RT
Sbjct: 162 TQQLIRG-----LGNTDFVLQQELDNLVAIAAQDRTVRT 195
>gi|254234899|ref|ZP_04928222.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa
C3719]
gi|296389804|ref|ZP_06879279.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas aeruginosa PAb1]
gi|126166830|gb|EAZ52341.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa
C3719]
Length = 621
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/405 (13%), Positives = 120/405 (29%), Gaps = 97/405 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + S + +NG+ I+ ++ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105
+ + LQ++ + L++ A++ LI TL Q + F ++
Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120
Query: 106 ---------------FVQHARNTGLSAEDFSSFL-------------------------- 124
F Q R S F L
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQLRAGLAGTGFVTDNELQS 180
Query: 125 --------------------DKQGIGDNHFK-------------QYLAIQSIWPDVVKND 151
K + ++ K + + ++ + ++ K+
Sbjct: 181 FARLEKQTRDFATLAIKADASKSSVSEDEVKAFYEGHKSEFMTPEQVVVEYV--ELKKSS 238
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F + + ++ A QK + +L + N + +I + + +
Sbjct: 239 FFDQVKVKQEDLEALYQKEIANLSEQRDAAHILIEV--NDKVGDEQAKAKIDEIKARLAK 296
Query: 212 LPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269
++F+ I + G Y P F+ L Q + P T G
Sbjct: 297 GEDFAALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHL 356
Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
I + + ++ +LK L + +E+ E K L S+A
Sbjct: 357 IKLLGVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSA 401
>gi|300770932|ref|ZP_07080809.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762205|gb|EFK59024.1| peptidyl-prolyl cis-trans isomerase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 458
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 100/268 (37%), Gaps = 16/268 (5%)
Query: 23 IIFCIVPI--VSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELEKIAVQ 78
++FC++ +++ + R+ T+ +I DI + L + N + + +Q
Sbjct: 8 LLFCVLGSVNLTFAQGKIVDRVVATVGANIILQSDIDMQYSQNLAQGMSPNEDFKCYILQ 67
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDFSSFLDKQGIGD-NH 133
+L+ + L Q+ I + V+ R G E SFL++ +
Sbjct: 68 QLLTQKLLAQQAVLDSIEVSESEVDDNLNNRLNVMTRQAGGK-ERLESFLNRSLLQYKEE 126
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ +A Q ++ + + K +E+ + + ++ + + I +
Sbjct: 127 MRTSVAEQLK-AQKMQQNIVQKIDVTPLEVKRYFEGLNKDSLPYFDTEVEIGEIVMYPVL 185
Query: 194 NQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNL 249
+ + K AE+ R ++ D + + S+ V+ G + + +F +
Sbjct: 186 TKEEKEASRKRAEDLRKQIVDGSDFGTIARLYSEDKGSAVAGGDLGFSTRDNYVKEFSAV 245
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKR 276
K + + T+ G ++ + ++R
Sbjct: 246 AFKLKPGEISQVFETEYGFHFLQVLERR 273
>gi|30020980|ref|NP_832611.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579]
gi|46396822|sp|Q81CB1|PRSA4_BACCR RecName: Full=Foldase protein prsA 4; Flags: Precursor
gi|29896533|gb|AAP09812.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579]
Length = 280
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G ++F+++++ G+ ++ K
Sbjct: 59 VEKVLHDKYK----------VTDEEVTKQLEELKDKMG---DNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K E +I K+ + + +L
Sbjct: 106 EKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G+ + +F++ K
Sbjct: 145 EKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + DK++L K + + +I+ + + + L
Sbjct: 201 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|332878099|ref|ZP_08445829.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684061|gb|EGJ56928.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 459
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 97/298 (32%), Gaps = 30/298 (10%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQK 67
++ F KLL + L + + + + + + E I D+ R+
Sbjct: 1 MNLFKKLLYAFVFLFEGIQMHLFAQSPNNVVDEVIWVVGDEAILRSDVEAARMDFG--AN 58
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-----SAEDFSS 122
I+G + ++L ++ L + + + +++ ++ AR L S E
Sbjct: 59 ISGNPYCVIPEQLAIQKLFLHQAQLDSVEVENSQISANME--ARLNELIMRAGSKEKLEE 116
Query: 123 FLDKQGIG-----DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
+ K K+ +Q V+ + E+ + M ++
Sbjct: 117 YYHKTMTQIREMMFESLKEQYTVQR-----VRENLTSDIKVTPAEVRRYFKDMPEDSLPW 171
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK---DCNKLEKFASKIHDVS--IG 232
+ + I Q +++ + + R+ + L S+ + G
Sbjct: 172 ISDQVEVQIITQQPRIPQEEIERVKAELRDYTDRVNNGESSFSTLAILYSEDPGSARYGG 231
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ Y+ +L P F N+ + ++ G I + DKR G+ ++
Sbjct: 232 EMDYVGRGELDPAFANVAFSLTDPKKISKVVESEYGFHIIQLVDKR---GDKVKVRHI 286
>gi|134094954|ref|YP_001100029.1| putative peptidyl-prolyl cis-trans isomerase protein [Herminiimonas
arsenicoxydans]
gi|133738857|emb|CAL61904.1| putative peptidyl-prolyl cis-trans isomerase D, ppiD-like
[Herminiimonas arsenicoxydans]
Length = 636
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 22/200 (11%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKI 68
++ L +L F V + SY S +S + + IT + D ++R + + +++
Sbjct: 10 RLMQFLLLLIILPSFAFVGLESYTSMGDASNTVAKVADQTITQPEWDAAQREQMSRFRQM 69
Query: 69 NGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNT 113
G+ ++ + LI + + E +++ + + V +
Sbjct: 70 FGDQFDAKMFDTPEAKQEILNNLIAQRVLTAEAKRNKLAVTDQALQQTIVNMGGLTTADG 129
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
E + + L QG+ ++ L ++ N + +++ +
Sbjct: 130 KFDVERYKAILAAQGMTPTMYEARLR-----QELTSQQVNAAIQNTAFAPDSLAKRLSEL 184
Query: 174 TVREYLIRTVLFSIPDNKLQ 193
+E ++ + F D Q
Sbjct: 185 GEQEREVQQLAFKTSDYAGQ 204
>gi|315635801|ref|ZP_07891063.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri JV22]
gi|315479780|gb|EFU70451.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri JV22]
Length = 269
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 91/301 (30%), Gaps = 48/301 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKINGELEKIAV 77
+ + I + + T+NGE IT DI+ R+ KL E + +
Sbjct: 5 VSSLVASIALATALNAADVSYATVNGENITKQDIAMALQDPRVDFDKL---PQEAKTQIL 61
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++++ L Q G+ D+ V + N L +
Sbjct: 62 EQIVNMKLIAQHAIDDGVEKDAKYV-EAMKKIKSNLALEVWQKNEI------------DK 108
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + + K K K + + +L +
Sbjct: 109 IKV----------------TEADKKDFYEKNKEKFVEPETFEASHILVKT-------EAE 145
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257
+ I +++ ++ K +K + G + P+F + +K T
Sbjct: 146 AKDIISQLDKASNKVEKFKELSKKSLDTASAKNGGALGRFAVEQMVPEFGSAVKALAKGT 205
Query: 258 --TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P TQ G I + DK ++ ++ + K E V+ LR +A
Sbjct: 206 YSKTPVKTQFGYHVIYLKDKFPSKTFAYTEVEKNINQVLIGNALNKKIKELVEDLRKDAK 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|163938953|ref|YP_001643837.1| peptidylprolyl isomerase [Bacillus weihenstephanensis KBAB4]
gi|163861150|gb|ABY42209.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
weihenstephanensis KBAB4]
Length = 289
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 100/300 (33%), Gaps = 41/300 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S + S +I T+ G+ IT + ++ + K
Sbjct: 1 MKKAMLALAATSVIALSACGTSSSDKIVTSKAGD-ITKEEFYNQM--------KTQAGKQ 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +++E + + D V+ F + + G + F + + +QG+ + K
Sbjct: 52 VLNNMVMEKVLIK-----NYKVDEKEVDKKFDEMKKQVG---DQFDTLMKQQGLKEETVK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ ++ + ++ A + K +E +L + + +
Sbjct: 104 NGVRASLAQEQAIEK------AITDKDLKAKFEDYK----QEIKASHILVKDEETAKKVK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ + K EE + +D EK G + + +F +K +
Sbjct: 154 EELAQ-GKSFEELAKKYSEDPGSKEK---------GGDLGFFGPDKMVKEFDEAARKLKK 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE---AEYVKKLRSN 311
+ + P TQ G I + + KA + + K + + +K+++
Sbjct: 204 DEVSEPVKTQHGYHIIKVTETHADATFDKAKADIKKEAVQEKTQDAQFMNDLMMKEIKKA 263
>gi|229591358|ref|YP_002873477.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens SBW25]
gi|229363224|emb|CAY50307.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens SBW25]
Length = 624
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 58/392 (14%), Positives = 117/392 (29%), Gaps = 93/392 (23%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
K + V ++ +++ S + +NGE IT ++S+ + + + Q +
Sbjct: 13 IAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQAVDMQRRQLMQQL 72
Query: 72 -------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF------------- 105
L + A++ LI L Q S F ++
Sbjct: 73 GKDFDASLLDEKLLREAALKSLIDRKLLLQGAADSKFGFSEAALDQVILQTPEFQVDGKF 132
Query: 106 ----FVQHARNTGLSAEDFSSFLDK--------QGIG----------------------- 130
F Q R G S F L + GI
Sbjct: 133 NAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTDSEVLAFARLEKQTRDF 192
Query: 131 -----------------------DNHFKQYLAIQSI---WPDVVKNDFMLKYGNLEMEIP 164
D H K+++ + + ++ K+ F + + E+
Sbjct: 193 ATVNIKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKSSFFDQVAVKDDELQ 252
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A QK + +L + N + +I++ + + K ++F+
Sbjct: 253 AAYQKETANLAEQRRAAHILIEV--NDKVTDAQAKAKIEEIQARLAKGEKFEALAKEFSQ 310
Query: 225 KIHDVS-IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR--DLGG 280
S G + P F+ L S++ + P + G I + +
Sbjct: 311 DPGSASNGGDLGFAGPGVYDPDFETALYALSKDQVSAPVRSTFGWHLIKLLGVEAPQVPT 370
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+LK L+ + ++E+ E K+L A
Sbjct: 371 FASLKDKLTKELKTQQVEQRFVEATKQLEDAA 402
>gi|28378171|ref|NP_785063.1| peptidylprolyl isomerase [Lactobacillus plantarum WCFS1]
gi|254556379|ref|YP_003062796.1| peptidylprolyl isomerase [Lactobacillus plantarum JDM1]
gi|300767131|ref|ZP_07077043.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180351|ref|YP_003924479.1| peptidylprolyl isomerase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|46396873|sp|Q88X05|PRSA1_LACPL RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|28271006|emb|CAD63911.1| peptidylprolyl isomerase [Lactobacillus plantarum WCFS1]
gi|254045306|gb|ACT62099.1| peptidylprolyl isomerase [Lactobacillus plantarum JDM1]
gi|300494950|gb|EFK30106.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045842|gb|ADN98385.1| peptidylprolyl isomerase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 298
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 81/255 (31%), Gaps = 34/255 (13%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+I ++++ S+ + +G IT+ + K +Q++I
Sbjct: 5 LIALAGVLLTFTLAGCGSKTVASTSGGKITESQYYSSMK-------GTSSGKQVLQQMI- 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L K + G + V + + G S FS+ L + G+ FK+ L
Sbjct: 57 --LNKVLEKDYGSKVSTKQVTKQYNTYKSQYGSS---FSTVLSQNGLTTKTFKEQLRSNL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + VK+ + +K + ++ +L + + ++K
Sbjct: 112 LLKEAVKDKVKIT--------DKALKKQWKSYEPKVTVQHILVAKSATADKVLDALKKDS 163
Query: 203 KDAEESRLRLPKDCNKLEK----FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-T 257
A ++L + K S + + + L + K T
Sbjct: 164 SQANFTKLAKKYSTDTTTKNDGGKLSAFDNTNTSYSSKFLTAAF--------KLKNGEYT 215
Query: 258 TNPYVTQKGVEYIAI 272
T+ T G E I +
Sbjct: 216 TSAVKTSNGYEIIRM 230
>gi|325108901|ref|YP_004269969.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
gi|324969169|gb|ADY59947.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
Length = 365
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 95/293 (32%), Gaps = 45/293 (15%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
S +NG+ IT DI R ++ + ++ +I T+ E E+ G+
Sbjct: 58 QQSPALARVNGQTIT-YDIVARECFERIG-------EEVLENMINRTVIHVETERRGVQV 109
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNHFKQYLAIQSIWPDV-VKNDFMLK 155
+N + A L + + L + G+ +++ IWP + ++ +
Sbjct: 110 TEADINNEVTKIAGKFNLPVDTWYQMLQTERGLSPMQYRR----DVIWPMIALRKLAGEE 165
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ Q+ VR + DN +R + E R P +
Sbjct: 166 VQISQADMQRAFQRDYGPRVR------CRMIMMDNV--------RRANEVWEKANRTPDE 211
Query: 216 CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA- 271
+KL + S + G + + ++ + + + +
Sbjct: 212 FDKLAREYSVESNSRSLGGSIPPISRYSGNQNLEDAAFRLQPGEVSGLIQVENHYVILKC 271
Query: 272 -------ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ D +D+ L AQ K ++ A + L+ N I Y
Sbjct: 272 EGHTEQVVTDIKDVWD------ELHAQLVEEKTQERVALVFENLKKNTRIDNY 318
>gi|253567245|ref|ZP_04844695.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_2_5]
gi|251944076|gb|EES84595.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_2_5]
Length = 456
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/321 (14%), Positives = 113/321 (35%), Gaps = 46/321 (14%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDIS--KRIALLKLQK 67
+K + +++F + + + S+A + I E I D+ + AL + +K
Sbjct: 1 MKKFVNFKFVVMFALALVANVASYAQDNVIDEVVWVIGDEAILKSDVEEARLAALYEGRK 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL---- 115
+G+ + +EL V+ L + I V N + L
Sbjct: 61 FDGDPYCVIPEELAVQKLYMHQAVLDSIEVPEAEVIQRVDYQINNYIQAMGTREKLEEYF 120
Query: 116 --SAEDFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQK 169
++ + + G+ +Q L + P V+ F + +P +
Sbjct: 121 NKTSTQIREAMRENARDGLIVQRMQQKLVGDIKVTPAEVRRYFKELPQDSIPYVPTQVEV 180
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
++ P + V++R+++ + + D + L S+
Sbjct: 181 ------------QIITQQPKIPVAEIEDVKRRLREYTDRINKGESDFSTLALLYSEDRGS 228
Query: 230 SI--GKAQYLLESDLHPQFQNL---LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI-- 282
+I G+ ++ + + P++ N+ L+ ++ + ++ G I + +KR G+
Sbjct: 229 AIKGGETGFMGKGQMVPEYANVAFNLQDTK-KISKIVESEYGFHIIQLIEKR---GDRIN 284
Query: 283 ALKAYLSAQNTPTKIEKHEAE 303
L + + ++++ A
Sbjct: 285 TRHILLKPKVSDKELDEANAR 305
>gi|257065468|ref|YP_003145140.1| parvulin-like peptidyl-prolyl isomerase [Slackia heliotrinireducens
DSM 20476]
gi|256793121|gb|ACV23791.1| parvulin-like peptidyl-prolyl isomerase [Slackia heliotrinireducens
DSM 20476]
Length = 438
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 82/285 (28%), Gaps = 35/285 (12%)
Query: 41 RIRTTING-----EVITDGDISKRIALLKLQK-------------INGELEKIAVQELIV 82
+ T+NG IT I +L L + +L + +
Sbjct: 46 GVAATVNGVEIGENSITGY-IEDFRSLNGLTEDAAWAEWMVNAGYTAEDLRSEVINYYVN 104
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQ 141
+TL +Q E++G+T DS ++ ++ + L GI + ++ L +
Sbjct: 105 QTLVRQAAEENGVTVDSAEIDSQVETM-KSNYEDEAAWDEALQSVGIQSEEVYRSELEL- 162
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ E ++ Q +LF ++ Q+
Sbjct: 163 YAMEQALVPIVAGDAEPSEEDLLMYAQMYGPAYDGAKKSSHILF-----AADDEATAQQV 217
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNP 260
+ + + G + + ++ + L + +
Sbjct: 218 LDQINNGEIDFADAAAQYS--IDTASAADGGNVGWDALNSFVTEYTDALSNLEEGQVSGL 275
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ G+ I + E+ S + P +++ +YV
Sbjct: 276 VTSDYGIHIIKCTEVFTCPEEVT-----SIEELPQELQDLIMDYV 315
>gi|196048054|ref|ZP_03115232.1| foldase protein PrsA [Bacillus cereus 03BB108]
gi|196021310|gb|EDX60039.1| foldase protein PrsA [Bacillus cereus 03BB108]
Length = 299
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 33/243 (13%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-DNHFK 135
+ ELI TLK E +K + ++ + G + F+ FL + G+ + +
Sbjct: 61 LDELI--TLKVLE-KKY--KVSNGEIDDEIKRLKAEFGNT---FTDFLAQNGVSNEEQLR 112
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + + E ++ Q+ K E + +L ++
Sbjct: 113 DVIKLD----KLKQKLALDHIKVKEKDLKDLYQQKK----PELRVSHILV-------ADE 157
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK- 252
+ +D L K S G Y + D+ FQ+ +K
Sbjct: 158 QQANDIKGKIDA-----GEDFGSLAKEFSLDVATKEKGGDIGYFKDGDMLQPFQDAARKL 212
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSN 311
+ P T G I + D++ L +K L ++ KI++ + ++KL
Sbjct: 213 KPGEVSQPVHTDFGYHIIKLIDEKKLPSFEKMKPQLESELITKKIDQSKINAEIQKLLDK 272
Query: 312 AII 314
I
Sbjct: 273 EHI 275
>gi|218961314|ref|YP_001741089.1| putative Peptidylprolyl isomerase [Candidatus Cloacamonas
acidaminovorans]
gi|167729971|emb|CAO80883.1| putative Peptidylprolyl isomerase [Candidatus Cloacamonas
acidaminovorans]
Length = 595
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 91/301 (30%), Gaps = 65/301 (21%)
Query: 46 INGEVITDGDISKRIALLKLQ------------KINGELEKIAVQELIVETLKKQEIEKS 93
+NG IT ++I + + + +E A + L+ + L +Q+I+K
Sbjct: 42 VNGTKITYEMYQQKIQEIYERYAEMYKDQPIDENMRRNIENQAWETLVNDILWQQQIKKH 101
Query: 94 GITFDSNTVNYFFVQ-----------------HARNTGLSA----EDFSSFLD------- 125
I + V ++ LSA F + ++
Sbjct: 102 KIKITEDDVLTEMQNNPPQELMQNESLQTNGRFDKSKYLSALKNNPQFFAAMEEYVRGYL 161
Query: 126 -----------KQGIGDNHFKQY-------LAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ GI + K ++ + IW + + + EI A
Sbjct: 162 PRQKLQEKIKAQAGITIDSLKAQYAKETDSISGKFIWFE---PNKSDPVTVTDAEIKAYY 218
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKI 226
K + ++ + + + K ++ + K + + +R R +D L K S
Sbjct: 219 DKNRETEYKKGPASRIKYLAFEEKPSDKDYASVKLLAEELYNRARRGEDFATLAKEYSDD 278
Query: 227 HDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ G + + P+F+ + + P T G I + +
Sbjct: 279 PGSKDNGGSLGVFGKGQMVPEFEQVAFALKVGEISKPVKTSFGWHIIRCDSIATITKDNP 338
Query: 284 L 284
Sbjct: 339 Q 339
>gi|301631501|ref|XP_002944836.1| PREDICTED: probable parvulin-type peptidyl-prolyl cis-trans
isomerase-like [Xenopus (Silurana) tropicalis]
Length = 262
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 102/311 (32%), Gaps = 60/311 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + + + + + +NG+ + +R LLK Q
Sbjct: 1 MKQKLLSGLVATAVWGAVALPVAAQNL-AIVNGKPVP----KERAELLKQQVERSGRPIT 55
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E+E +E+I + QE +K G+ +
Sbjct: 56 PEIEGQIKEEVIAREIFLQEAKKRGLEASKD----------------------------- 86
Query: 130 GDNHFKQYL--AIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFS 186
FK + A Q+I + D+ K + EI A K + + + +EY + +L
Sbjct: 87 ----FKNQMELARQTILIRELFADYQKKNPVSDAEIQAEYDKFVASNSGKEYKVSHILVE 142
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
D +++ E+ + KD G + + +F
Sbjct: 143 KEDEAKSIIASIKQGSAKFEDIAKKQSKDPG---------SGARGGDLDWANPNSYVSEF 193
Query: 247 -QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ +LK + T P +Q G I + D+R ++ + + Q T ++ ++
Sbjct: 194 TEAMLKLKKGEMTAEPVKSQFGWHVIRLDDERQ--AQLPKQEEVKPQITQQLQQQKLGQF 251
Query: 305 VKKLRSNAIIH 315
+ LR+ A +
Sbjct: 252 QENLRTKAKVE 262
>gi|323490390|ref|ZP_08095605.1| foldase protein PrsA [Planococcus donghaensis MPA1U2]
gi|323396060|gb|EGA88891.1| foldase protein PrsA [Planococcus donghaensis MPA1U2]
Length = 288
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 84/297 (28%), Gaps = 28/297 (9%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
VL I + ++ + + IT K KL +G + +
Sbjct: 11 VLAATAIFILAAFNG----DETVAKVGDKEIT-----KEALYEKLVATSGAAT---LDAM 58
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + QE EK+ + ++ + G AE L G+ ++ +
Sbjct: 59 ISNEVVNQEAEKAEVEVTQEEIDAEMAVYEEQYG-GAEGLEQALASSGMSIADLEEEMKT 117
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
++ D + + NK+ + E +L + + + +
Sbjct: 118 YLKVEKIIGPDIEITDEQISTYFEENKETFAQASKVE--ANHILVETQEEADEVKAKLDD 175
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN 259
AE D + E G ++ P+F+ + ++
Sbjct: 176 GDDFAE-LAAEYSVDTSNAED---------GGALGEFGAGEMTPEFEEAAFSLKVDEISD 225
Query: 260 PYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P T G I + K + K + + A ++ + + I
Sbjct: 226 PVETDYGFHIIQVTGKTEATEANLEDSKEQIKETLFDEALNTQYAAWLAEKTESYNI 282
>gi|308066877|ref|YP_003868482.1| Parvulin-like peptidyl-prolyl isomerase [Paenibacillus polymyxa
E681]
gi|305856156|gb|ADM67944.1| Parvulin-like peptidyl-prolyl isomerase [Paenibacillus polymyxa
E681]
Length = 372
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 101/287 (35%), Gaps = 30/287 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ T G IT+ + ++ I+++K +A ++ + +K++ + K +
Sbjct: 46 SKVVVTYKGGTITENEFNQEISMMKFL-YPEYEAALASDQVREQIVKQEVVYKL---LAA 101
Query: 100 NTVNYFFVQHARNTGLSAED---------FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ Q A+ E F +FL + + + K Y V N
Sbjct: 102 KADDKAKEQGAKQGNEQLEQYKKSVGDDKFKTFLSDKKLTEQGVKDYFTRVMT----VIN 157
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
K + +++ K K + T +R VL + D K + Q + +K A+E +
Sbjct: 158 SETNKVTDDQLKQEFEKNKDQFTTAT---VRHVLINFQDPKTKKQRKKEDALKLAKEVKA 214
Query: 211 RLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
+L A K + + G + + P F+ + N P T+
Sbjct: 215 KLDGG-ADFATIAKKYSEDPGSASNGGLYENASVAQWVPAFKEAAETQPINKIGEPVETE 273
Query: 265 KGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKL 308
G I + + + + K+ L + I+ + KL
Sbjct: 274 YGYHVIKVESRNEPTFDKLKDNEKSALKNKLAGESIQNFTENDLAKL 320
>gi|206971880|ref|ZP_03232829.1| foldase protein PrsA [Bacillus cereus AH1134]
gi|206733265|gb|EDZ50438.1| foldase protein PrsA [Bacillus cereus AH1134]
gi|326940633|gb|AEA16529.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 280
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G ++F+++++ G+ ++ K
Sbjct: 59 VEKVLNDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K E +I K+ + + +L
Sbjct: 106 EKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G+ + +F++ K
Sbjct: 145 EKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + DK++L K + + +I+ + + + L
Sbjct: 201 EVGQLSEPVKSSFGYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|313622749|gb|EFR93091.1| foldase protein PrsA [Listeria innocua FSL J1-023]
Length = 291
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 97/297 (32%), Gaps = 46/297 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LE 73
+ +L + ++ + S + + T +G D+++ ++ G ++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGNVVKTDSG------DVTQDELYDAMKDKYGSEFVQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ ++++ + K V+ F ++ G + FS+ L + G+ +
Sbjct: 55 QLTFEKILGDKYK----------VSDEDVDKKFKEYKSQYG---DQFSAVLAQSGLTEKS 101
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK L +V+ + ++ + + + +NK +
Sbjct: 102 FKSQLKYNL----LVQKATEANADTSD----KALKEYYKTWQPDITVSHI-LVADENKAK 152
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-- 251
K + D E + G+ + P F+
Sbjct: 153 EVEQKLKDGAKFADLAKEYSTDTATKE---------NGGQLAPFGSGKMDPAFEKAAYAL 203
Query: 252 KSQNNTTNPYVTQKGVEYIAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
K++ + + P TQ G I + D + ++YL++Q T ++K +
Sbjct: 204 KNKGDISAPVKTQYGYHIIQMDKPATKTTFDKDKKAVKESYLASQLTTENMQKTLKK 260
>gi|313204350|ref|YP_004043007.1| ppic-type peptidyL-prolyl cis-trans isomerase [Paludibacter
propionicigenes WB4]
gi|312443666|gb|ADQ80022.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paludibacter
propionicigenes WB4]
Length = 647
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 59/369 (15%), Positives = 111/369 (30%), Gaps = 92/369 (24%)
Query: 23 IIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE-- 79
I F +S S+A +S + TING+ ++ + + N L+K + E
Sbjct: 6 IAFLTFWALSVGSFAQTSDPVLMTINGKPVSKSEFE---YIYNKNNTNNSLDKKTLDEYV 62
Query: 80 --LIVETLKKQEIEKSGITFDSNTVNY--FFVQHARNTGLSAEDFSSFL----------- 124
I LK +E +K GI ++ + L+ L
Sbjct: 63 ELFINFKLKVEEAKKQGIDTTEAFISELSGYRSQLTRPYLTDPKVDEILLREAYERSKED 122
Query: 125 ----------DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI- 173
+ + + K + I +IW + +F + + A K +
Sbjct: 123 VDVSHILIRIPQNALPADTLKAWNEINTIWRRLEHENFSRVAKEISQDESAEKNSGRLGW 182
Query: 174 ------------------------------------------TVREYLIRTVLFSIPDNK 191
T+ + L+ ++
Sbjct: 183 ISVFRTVYPFESAAYNTPVGSYSKPIRTAFGYHIVKVHARRKTLGDVLVSHIMILTNKG- 241
Query: 192 LQNQGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQF 246
F+ KR K D+ RL +D L + S+ S G+ + + P+F
Sbjct: 242 ---DDFLNKRAKTTIDSLYRRLIAGEDFGALARKYSQDKTTSSKNGELPWFGSGRMVPEF 298
Query: 247 QNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE- 303
+ + + P T G + + DK+ + LKA L + K +
Sbjct: 299 EKAAFALKNVGEISKPIQTNGGWHILKLLDKKGIASFDELKADLERKV---KRDDRSKSG 355
Query: 304 ---YVKKLR 309
++ KLR
Sbjct: 356 QQVFLAKLR 364
>gi|325971259|ref|YP_004247450.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta sp.
Buddy]
gi|324026497|gb|ADY13256.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta sp.
Buddy]
Length = 348
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 84/277 (30%), Gaps = 39/277 (14%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA------EDFSSFLDKQG 128
+ LI L +Q + G+ + ++ + N S E F+ +
Sbjct: 68 QVLNLLINNELFRQGAARDGVKITDSMIDSAYASQKANLEASYNQVISDEQFAEVITNNF 127
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLK----YGNLEMEIPA--NKQKMKNITVREYLIRT 182
+++ + Q + ++ E EI + K K + ++ +
Sbjct: 128 GSVEAYRKMVGEQLMVDSYIRLKKADTLNTPVSITEAEISSFYRKNKTQFVSPETVKLSH 187
Query: 183 VLFSIPDNKLQNQ---GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL- 238
+ + D++ N ++ + L K + G +L
Sbjct: 188 IYIPLTDDQTANAKNKATLEDVAAKIKAGTLTFEKAVVDYSQDPQSKSKA--GDIGWLTM 245
Query: 239 -----ESDLHPQFQNLLKKSQNNTTNPYVTQ-KGVEYIAICDKRDL-----------GGE 281
S L F ++ ++ TT+ VT G + I +
Sbjct: 246 DNADALSGLGDAFFDVAFTTEVGTTSSVVTSLTGYHILKILAYNETKILGLDEAISPNTT 305
Query: 282 IALKAYLSAQNTPTKIEK----HEAEYVKKLRSNAII 314
++ Y+ + + K ++ V +LR +A +
Sbjct: 306 STIRDYIKNELSSAKQQETYYKAINSLVDELRKSATV 342
>gi|149194292|ref|ZP_01871389.1| CELL BINDING FACTOR 2 PRECURSOR MAJOR ANTIGEN PEB4A [Caminibacter
mediatlanticus TB-2]
gi|149135467|gb|EDM23946.1| CELL BINDING FACTOR 2 PRECURSOR MAJOR ANTIGEN PEB4A [Caminibacter
mediatlanticus TB-2]
Length = 292
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 100/280 (35%), Gaps = 42/280 (15%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ +NG+ IT +I+ LQ I G+ I +Q+L + +KK + D
Sbjct: 45 VVAEVNGKKITVAEINA-----YLQGITGDKR-IKLQDLPAQHVKK-------LVKDYAD 91
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ + A++ + F + K LA+ W +K +F +
Sbjct: 92 TLTVYEKKAKSIENTP-QFKAA-----------KMKLAVDM-W---LKKEF-DNIKISDK 134
Query: 162 EIPANKQKMKNI---TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E A +K K++ + + R +L + D KL + + + + +
Sbjct: 135 EAKAFYEKNKDVFFKSTPQIKARHIL--VKDEKLAKKLINELKGLKGKALEEKF---AEL 189
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKR 276
+K++ V G+ + + P+F + T P T+ G I + K+
Sbjct: 190 AKKYSIGPSKVQGGELGWFSPKQMVPEFAKAAESLKPGEITLKPVKTRFGYHIILVEGKK 249
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + K +K + E ++ L+ I +
Sbjct: 250 SNTY-IPYEKVKDQIIGYLKNQKLKKE-LETLKKQEKIKF 287
>gi|254236772|ref|ZP_04930095.1| hypothetical protein PACG_02782 [Pseudomonas aeruginosa C3719]
gi|126168703|gb|EAZ54214.1| hypothetical protein PACG_02782 [Pseudomonas aeruginosa C3719]
Length = 272
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGVAIGE-DLLAR----ELQYHPADSYAVALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ + G ++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLA 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + A +A ++A +++ +Y+ L +A I +
Sbjct: 217 REGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 261
>gi|107103386|ref|ZP_01367304.1| hypothetical protein PaerPA_01004456 [Pseudomonas aeruginosa PACS2]
gi|296387613|ref|ZP_06877088.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa PAb1]
gi|313109291|ref|ZP_07795259.1| putative peptidyl-prolyl cis-trans isomerase [Pseudomonas
aeruginosa 39016]
gi|310881761|gb|EFQ40355.1| putative peptidyl-prolyl cis-trans isomerase [Pseudomonas
aeruginosa 39016]
Length = 272
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGVAIGE-DLLAR----ELQYHPADSYALALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ + G ++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKEAGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLA 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + A +A ++A +++ +Y+ L +A I +
Sbjct: 217 REGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 261
>gi|297183681|gb|ADI19806.1| parvulin-like peptidyl-prolyl isomerase [uncultured alpha
proteobacterium EB000_37G09]
Length = 288
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 96/316 (30%), Gaps = 60/316 (18%)
Query: 13 IKLLTTYFVLIIFCIVPI-VSYKSWAMSSRI-----RTTINGEVITDGDISKRIALLKLQ 66
+ + ++ + PI + S A ++ +NGE I ++ + L +
Sbjct: 1 MSFIRSFCCAALLVSSPIIFATTSSAQENKPENKITVADVNGEAIYLEEVMRLAEKLPTE 60
Query: 67 KINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA---EDF 120
LE V ++I L +SG++ + V+ A A E
Sbjct: 61 YRQRPLESYFGGLVDDVIDSRLAAVAGAESGLSENPG-VSRLMEVAAMRVLAEAWIAEQV 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ + + + +K Y+A N + E
Sbjct: 120 NKAITEDALTA-TYKLYIA-------------------------------DNGSREEVKA 147
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
R +L +P+ ++K A+ + + + G Y
Sbjct: 148 RHIL--VPEEATAR-AIIEKLTGGADFAEIAKTDST--------GPSGPNGGDLGYFARG 196
Query: 241 DLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ P F + + T P TQ G I + DKR + Q +
Sbjct: 197 AMVPTFEAAAFELEPGSFTPEPVQTQFGWHIIKVEDKRVATPPSFEEMVP--QLRQNLLN 254
Query: 299 KHEAEYVKKLRSNAII 314
+ ++KLR++A I
Sbjct: 255 QTLGRILEKLRASAQI 270
>gi|282878158|ref|ZP_06286955.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310]
gi|281299736|gb|EFA92108.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310]
Length = 476
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 91/308 (29%), Gaps = 58/308 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +++ C S + + TING+ IT + G +
Sbjct: 1 MKKMKKLLTIMLCCS----SMALAQQTDPVVMTINGQPITRSEFEYSYN---KNNAEGVI 53
Query: 73 EKIAVQE----LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+K V E I LK + + + +A F +
Sbjct: 54 DKKTVDEYVDLFINYKLKVMAAQAAKMD-------------------TARSFKTEFA--- 91
Query: 129 IGDNHFKQ-YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
++ + I V+ Y + + +K +LF I
Sbjct: 92 ----TYRDQQIRPAMITDADVEQRAREIYRESQQRVDGVGGLVKPA--------HILFGI 139
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQ 245
+++ K+ D+ + L D L + S + G+ ++ + +
Sbjct: 140 RQTDGEDKKNQAKQRADSVYNALLKGADFAALARQLSDDRGSAEQGGELPWIEKGQTLKE 199
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDK---------RDLGGEIALKAYLSAQNTPT 295
F+++ + + P+++ G + + DK R + + Q
Sbjct: 200 FEDMAFSLRKGELSKPFLSPAGYHIVLLKDKGKFFPYDSLRTSILRFIEQRGIREQIISQ 259
Query: 296 KIEKHEAE 303
KIE
Sbjct: 260 KIETLAKA 267
>gi|228990245|ref|ZP_04150213.1| Foldase protein prsA 2 [Bacillus pseudomycoides DSM 12442]
gi|228996340|ref|ZP_04155983.1| Foldase protein prsA 2 [Bacillus mycoides Rock3-17]
gi|229004004|ref|ZP_04161808.1| Foldase protein prsA 2 [Bacillus mycoides Rock1-4]
gi|228757218|gb|EEM06459.1| Foldase protein prsA 2 [Bacillus mycoides Rock1-4]
gi|228763379|gb|EEM12283.1| Foldase protein prsA 2 [Bacillus mycoides Rock3-17]
gi|228769484|gb|EEM18079.1| Foldase protein prsA 2 [Bacillus pseudomycoides DSM 12442]
Length = 284
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/258 (13%), Positives = 88/258 (34%), Gaps = 41/258 (15%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKS---GITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
G+ +K + + L + + + V+ F + G + F + L
Sbjct: 39 TKGDFDKQLKERYGKDMLYEMMAQDIMTKKYKVSDDEVDKEFKKAKDQFG---DQFKTVL 95
Query: 125 DKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+ + ++ FK + + + +K + ++ AN + E +
Sbjct: 96 ESNRLKDEDDFKNQIRFKLAMNEAIKK------SITDKDVKANYK-------PEIKASHI 142
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESD 241
L + D K N ++K++ + +L K S+ + G Y
Sbjct: 143 L--VNDEKTAND--IKKQLDE--------GASFEELAKQQSQDPGSKENGGDLGYFGPGK 190
Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTK 296
+ P+F+ K + + P + +G I + DK++L + +++ L + +
Sbjct: 191 MVPEFEEAAYKLNVGEISKPIKSSQGYHIIKLTDKKELKPYDEVKDSIRKNLEEKLLADQ 250
Query: 297 IEKHEAEYVKKLRSNAII 314
+ + + A I
Sbjct: 251 -TTGQKILLDEF-KKADI 266
>gi|67459334|ref|YP_246958.1| protein export protein PrsA precursor [Rickettsia felis URRWXCal2]
gi|75536240|sp|Q4UKY0|PLP_RICFE RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl
cis-trans isomerase plp; AltName: Full=Rotamase plp;
Flags: Precursor
gi|67004867|gb|AAY61793.1| Protein export protein PrsA precursor [Rickettsia felis URRWXCal2]
Length = 282
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 95/294 (32%), Gaps = 30/294 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S ++A ++ T G + + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYVNNLLLK---EEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + NK + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---SQKEANNIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
K ++L +K S + IG L P+F + N +
Sbjct: 161 LSKGGNFTKLAEESSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVST 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L + A
Sbjct: 217 PVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYISDLEAKAD 268
>gi|21673541|ref|NP_661606.1| hypothetical protein CT0711 [Chlorobium tepidum TLS]
gi|21646651|gb|AAM71948.1| lipoprotein, putative [Chlorobium tepidum TLS]
Length = 450
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 102/313 (32%), Gaps = 50/313 (15%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQ-KIN 69
K+ + +FVL+ +V + +S + +NG IT+ I +R A+ + + +
Sbjct: 3 KITSLFFVLLFAILVGCSEKSAQESNSGVAAVVNGVEITNRQIDYFYQRTAMPGMSAEDS 62
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L++ + +LI ++ + + D+N +Y +A
Sbjct: 63 ANLKRRILSDLI--RIELLAGKAKEMKLDNNP-DYSMALYAAQKN--------------- 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ + N + E + Q + Y+ V+F D
Sbjct: 105 --------VLAGLAERKLAGNQAPVTPDQAESVVQNAPQLF--AGRKLYVFEEVIFPGVD 154
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
L DA + K K + S+ L +
Sbjct: 155 MPLLESL-------DAMATNGAPLSGLLDELKAKKKPFNSSLKAL---TSEQLPAPILAV 204
Query: 250 LKKSQNNTTNPYVTQKGVE---YIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
L K + NT P V + G + + + D L G+ A +A + + +
Sbjct: 205 LNKLKPNT--PQVVRSGDKVSVILVLHDAIPAPLEGDPARRAAAAMIEANQRNQALSKA- 261
Query: 305 VKKLRSNAIIHYY 317
+++L NA I YY
Sbjct: 262 MQELLDNAKITYY 274
>gi|171058521|ref|YP_001790870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
gi|170775966|gb|ACB34105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
Length = 275
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 100/291 (34%), Gaps = 54/291 (18%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIVETLKKQEI 90
+ A + I +NG+ + + + Q ELE+ EL++ + QE
Sbjct: 26 PTIAQAQNI-AIVNGKGVPTARFDSFMTQVTKQGNQPRTAELERQVKDELVLREIFVQEA 84
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
EK G+ ++ + + ++
Sbjct: 85 EKRGL------------------------------QKNSEYRTQMEIARQSLLIRELFN- 113
Query: 151 DFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
++ K + EI A K+K+ +EY + +L ++ A +
Sbjct: 114 EYQKKNPVTDAEIKAEYDKVKSGAGEKEYHAKHILVE------------KEDEAKALIAE 161
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNP-YVTQK 265
L+ ++L K ASK + G + ++ P+F Q ++K + T +Q
Sbjct: 162 LKGGAKFDELAKKASKDPGSAQNGGDLDWAAPANYVPEFSQAMVKLEKGKYTETAVKSQF 221
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G I + D R+ + + AQ ++ +Y ++LRS A Y
Sbjct: 222 GYHIILLDDVRE--AQFPPLEEVKAQLEQRLAQQKMGKYREELRSKAKTDY 270
>gi|152988940|ref|YP_001346623.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
aeruginosa PA7]
gi|150964098|gb|ABR86123.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa PA7]
Length = 272
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 96/285 (33%), Gaps = 56/285 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNT 101
+NG I + D+ R +LQ + +A++ LIV L Q + GI
Sbjct: 20 VNGVAIGE-DLLAR----ELQYHPADSYALALEAACRALIVRQLLLQRADALGIEARCED 74
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
G + ++ + E
Sbjct: 75 --------------------------GETPEEAR------------IRQLLEEEVQVPEA 96
Query: 162 EIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKD 215
+ A + + +R VL + + L+ + +K+ + +E R +
Sbjct: 97 DEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQAAELLDELRGHPERF 156
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ +F++ G +++ P+F+ LL+++ +P ++ G+ + +
Sbjct: 157 VDLARRFSACPSKEEGGDLGWIVPGQTVPEFEKRLLRRAPGLLEHPLESRYGLHVVELLA 216
Query: 275 KR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + G A +A ++ +++ +Y+ L +A I +
Sbjct: 217 REGGEPLGFDAARAQIATHLQAQVLQRAVGQYIGVLAGDARIEGF 261
>gi|332882741|ref|ZP_08450352.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679243|gb|EGJ52229.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 463
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 86/293 (29%), Gaps = 33/293 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQK--INGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + +I + DI K LK Q+ + +L+ + L + + +
Sbjct: 42 DGVAAVVGDYLILESDIDKAYIDLKQQEVDTKNITRCQMLGKLMEDKLYAHQAVQDSVKL 101
Query: 98 DSNTV----NYFFVQHARNTGLSAEDFSSFLDKQG-----------IGDNHFKQYLAIQS 142
V N G + F K N Q + Q
Sbjct: 102 TDAEVREQVNQRIEYLTAQLGGDIKKLLEFYKKDDEQSMREELFTLFKVNTLAQRMRQQI 161
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL--FSIPDNKLQNQ-GFVQ 199
+ V + + N IPA + E I ++ P + +Q +
Sbjct: 162 VKDVEVTPE---EVRNFFNAIPA---DERPHFGTELEIAQIVVNPVAPPSAVQKVIDLLN 215
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
KD EE+ S+ + S F+++ + +
Sbjct: 216 DIKKDVEEN----GMSFATKAILYSQDRATGGQLLTFNRNSAFDKAFKDVAFTLREGEIS 271
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P+ + G I + R G E++++ L + P + E + K+R
Sbjct: 272 KPFESSFGWHIIQMDKIR--GKEVSVRHILIMPDIPQEALDEAKEKIAKIRDR 322
>gi|312860326|gb|ADR10202.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium enrichment
culture clone F5-11]
Length = 290
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 92/294 (31%), Gaps = 44/294 (14%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ + T+NG I G +L + + E A
Sbjct: 30 ASLPQALPRSGNEPVATVNGRPIPRGVFE---VMLGVTRQEKASEAEAT----------- 75
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDV 147
+ + + ++ E KQG D+ F LA+Q +
Sbjct: 76 -GQTAQPELTEADHQAILDRL-----ITLEAVVQEAAKQGFGTDDAFLHELALQR--DTL 127
Query: 148 VKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ F+ + A + + EY +R + + ++ + + K A
Sbjct: 128 IAQRFLAEASKKIEIDDAAIAEYYAQLPKHFEYDLRQI---VTADEASARAVIAKLKDGA 184
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVT 263
+ ++L + + + G +L+ L + ++ Q T P T
Sbjct: 185 DFAQL--------ASEMSQAPEAANGGSLGWLMAEQLPTTIADAVRAMQAGTFTDQPLQT 236
Query: 264 QKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+G + + R L +A++ + KI++ + ++R++A +
Sbjct: 237 PQGWHVVRVEGVRQLEQVPLETARAWIEGELRNQKIQQM----IDQMRASAKVE 286
>gi|322381169|ref|ZP_08055172.1| PrsA-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321154745|gb|EFX47016.1| PrsA-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 303
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 101/301 (33%), Gaps = 31/301 (10%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
+ V+++ C V + + + + I I GD+ + L G +
Sbjct: 15 SLAVVVLVCFVIFGFTGAASGNGTVVAEIGKTKIRKGDLEQN-----LITHYGSS---VL 66
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL-DKQGIGDNHFKQ 136
+++ K E + +G+ ++ S E F + ++ G+ K
Sbjct: 67 NQMLDREAIKMEAQSAGLQISDADIDKELKVM-MQAYESEEVFYQSMKEQLGMSRQEVKD 125
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + + V D + ++ I A+ + RE +R V + +
Sbjct: 126 DVYYKLLLEKVATKDIQVSDSEIQDYIQAH--PEEYAKKREMHLRRVTTKTREQANKVVA 183
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-- 254
K A+ +R R D + G ++ E D + ++K+++
Sbjct: 184 AFSKGDDFAKLARDRSIDDYAN-----------NGGDLGWVKE-DDPLTDKQVMKQAKDL 231
Query: 255 --NNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P T +G + + + +D G E +K + Q K + KKLR
Sbjct: 232 KVGQISKPVQTNEGYLIVFLQESKDKGGLDEQTIKETVRKQLALQK-APSIKDLSKKLRE 290
Query: 311 N 311
Sbjct: 291 K 291
>gi|258543673|ref|YP_003189106.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-01]
gi|256634751|dbj|BAI00727.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-01]
gi|256637807|dbj|BAI03776.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-03]
gi|256640861|dbj|BAI06823.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-07]
gi|256643916|dbj|BAI09871.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-22]
gi|256646971|dbj|BAI12919.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-26]
gi|256650024|dbj|BAI15965.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-32]
gi|256653014|dbj|BAI18948.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256656068|dbj|BAI21995.1| peptidyl-prolyl cis-trans isomerase precursor [Acetobacter
pasteurianus IFO 3283-12]
Length = 352
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 50/279 (17%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKINGELE-KIAVQELIVETLKKQEIEKSGITFD 98
+ T+NGE IT D+ + L +++++ L + V +L + +K G+
Sbjct: 93 VVATVNGEKITLSDVQTAMISLPPQMRQLPPNLIFPMLVNQLADQKAILITAQKEGLDKK 152
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V A NT L S + + D+ KQY
Sbjct: 153 P-ETQQMMVN-ASNTALQNAWLSEQVMPH-LTDDAIKQYY-------------------- 189
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
++ +E R +L + + ++K A+ +L +K
Sbjct: 190 -------DQNYAGKPAEKEVHARHILVKT---EAEANDVIKKLKAGADFGKLAAHVSTDK 239
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKR 276
+ G + ++D+ P F + + + P +Q G I + D R
Sbjct: 240 GSAQQ------NGGDLGWFKKTDMIPAFSDAAFAMKKGEISSTPVKSQYGYHVIQVLDTR 293
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + + +YV++ A
Sbjct: 294 --TDPVPTLDAVRDKIR----QALIQKYVREAVDKATNQ 326
>gi|291515480|emb|CBK64690.1| Parvulin-like peptidyl-prolyl isomerase [Alistipes shahii WAL 8301]
Length = 463
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 81/258 (31%), Gaps = 19/258 (7%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQE 89
M ++ + G I ++ L Q+ + A++ L+ + L +
Sbjct: 19 QVMLDKVVAVVGGSSILYSEVDDYARQLTEQRRQEGYTSDRDPMNEALEALMTQKLLYNQ 78
Query: 90 IEKSGITFDSNTVNYFFVQHARNT---GLSAEDFSS-----FLDKQGIGDNHFKQYLAIQ 141
+ + + + + + S + + + I +++
Sbjct: 79 AQIDSVKVNDADIMARVEEQVQQMVEAEGSIPQLEAKHHMPIFNIREIMRQRYEEQAYAN 138
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
S+ +VV + G +E + + + +Y+ + P + + ++R
Sbjct: 139 SMQTEVVD-KVSVIPGEVERFYKSISKDSLPLVADQYVYAQIT-KFPKSMTAAKQRTRER 196
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-SQNNTT 258
+ D E + L + S+ G+ L P F L+K +
Sbjct: 197 LIDMRERVITGKAKFENLARMYSQDPGTMMRGGEMDPSTLEQLDPAFGAALEKMRPGQIS 256
Query: 259 NPYVTQKGVEYIAICDKR 276
+Q G I + DKR
Sbjct: 257 EVVESQFGFHIIQLLDKR 274
>gi|281357480|ref|ZP_06243968.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis
ATCC BAA-548]
gi|281316083|gb|EFB00109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Victivallis vadensis
ATCC BAA-548]
Length = 361
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 98/313 (31%), Gaps = 34/313 (10%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL-----------IVE 83
WA + I + IT ++ + L Q +G++ + +L + +
Sbjct: 46 IWAKLPDVVAQIGDKKITKQEV---LKPLLAQMPDGKVPSMMADQLDNAAPGVIKWFVDQ 102
Query: 84 TLKKQEIEKSGITFDSNTVNYFF-VQHARNTGLSAEDFSSFLDKQGIGDNHFKQY----- 137
+ + K+G Q + E F+ L Q +++
Sbjct: 103 QILEAAAAKAGFKPSKEHAQKAVKAQWEKVGKEDRERFAQMLQIQNKTVEQYQEEMVSNP 162
Query: 138 -LAIQSIWPDVVKNDFM-LKYGNLEMEIPANKQKMKNITVR-----EYLIRTVLFSIPDN 190
+ Q + +K EM ++ K K + + +L + D
Sbjct: 163 EIQKQIALDEFLKTKIAEPTVTEAEMRKYYDENKQKEFSTPADRPGTFRASHILIMVDDK 222
Query: 191 KLQNQGFVQKRIKDAEESRLRL-PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQN 248
+A + L+ P L + S G + ++ P+FQ
Sbjct: 223 ADDAAKKAALDQINAISAELKKDPARFEALAREKSGCPSKAKGGSLDSFSDKEMVPEFQK 282
Query: 249 LLK-KSQNNTTNPYVTQKGVEYI---AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
L+ + + P TQ G I + ++ + + + +++ +Y
Sbjct: 283 ALEGLKEGEISAPVKTQFGYHIIRRDKLQSEKVESFDNVKETVGNILKRQKQMQAFT-DY 341
Query: 305 VKKLRSNAIIHYY 317
+ +L ++ + ++
Sbjct: 342 MAQLEKDSGVKFF 354
>gi|126738446|ref|ZP_01754151.1| PPIC-type PPIASE domain protein [Roseobacter sp. SK209-2-6]
gi|126720245|gb|EBA16951.1| PPIC-type PPIASE domain protein [Roseobacter sp. SK209-2-6]
Length = 283
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 88/280 (31%), Gaps = 46/280 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
++ + T+NGE IT G + ++ L + +L + I++ L +Q K +
Sbjct: 28 HANTVIATVNGEAITLGHMI--MSRENLPEQYKQLPDDVLFNAILDQLVQQTALKQELNG 85
Query: 98 D-SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ + V + + LA I V++
Sbjct: 86 EVPHDVQLALDNES------------------------RAQLAANVI-GRVMR----SAT 116
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ + K+ E+ +L +++ ++ +
Sbjct: 117 TDEALRAAYEKKYSSGDGGDEFHASHILV-------ESEETALDIKQELDAGA----DFA 165
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+++++ + G + + + P+F+ +L+ + P TQ G I + ++
Sbjct: 166 VLAKEYSTGPSGPNGGDLGWFTQGRMVPEFEEAVLEMRSGEVSEPVQTQFGWHVIMLKER 225
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R +A Q + + L S A I
Sbjct: 226 RKTAAPSFEEA--RGQLVQELQNEAIEARISALTSAAEID 263
>gi|310639515|ref|YP_003944273.1| ppic-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
polymyxa SC2]
gi|309244465|gb|ADO54032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
polymyxa SC2]
Length = 372
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/288 (17%), Positives = 103/288 (35%), Gaps = 32/288 (11%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ T G IT+ + ++ I+++K +A ++ + +K++ + K +
Sbjct: 46 SKVVVTYKGGTITENEFNQEISMMKFL-YPEYEAALASDQVREQIVKQEVVYKL---LAA 101
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ + A+ E + +G++ FK +L+ Q + VK+ F +
Sbjct: 102 KADDKAKEEGAKQGNEQLEQYKKS-----VGEDKFKTFLSDQKLTEQGVKDYFTRVMTVI 156
Query: 160 EMEIPA----------NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
E K K + T +R VL + D K + Q + +K A+E +
Sbjct: 157 NSETNKVTDDQLKQEFEKNKDQFTTAT---VRHVLINFEDPKTKKQRTKEATLKLAKEVK 213
Query: 210 LRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT 263
+L A K + + G + + P F+ + N P T
Sbjct: 214 AKLDGG-ADFATIAKKYSEDPGSASNGGLYENASVAQWVPAFKEAAETQPINKIGEPVET 272
Query: 264 QKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKL 308
+ G I + + + + KA L + I+ + KL
Sbjct: 273 EYGYHVIKVESRNEPTFDKLKDNEKAALKNKLAGESIQNFTENDLTKL 320
>gi|261880044|ref|ZP_06006471.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333284|gb|EFA44070.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 474
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 95/300 (31%), Gaps = 48/300 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK-INGELEK 74
+ +L + + +S+ + + T+NG+ + + I+ + K
Sbjct: 1 MKIKLLLGVTLMCGTLSFA--QNADPVIMTVNGKPVPRSEFEYSYNKNNTDGVIDRKSVK 58
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
V I LK + +++G+ + ++FS + D+
Sbjct: 59 EYVDLFINYKLKVEAAKEAGL--------DTMLSF-------RQEFSGYRDQ-------- 95
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ I + V+ + Y + ++ N + +L + +
Sbjct: 96 --QIRPAMISEEDVEAEARKIYRQTQQQVDQNGGM--------VHVAHILVMMKQQATPD 145
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-K 251
+ K D+ L+ D L K S+ + G+ +++ +F+++
Sbjct: 146 ENRKAKVRIDSVYEALKKGADFAALAKQVSQDPGSANNGGELPMIVKGQTLKEFEDVAWS 205
Query: 252 KSQNNTTNPYVTQKGVEYI---------AICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ P+++ G + + +RD + + L Q K++
Sbjct: 206 LKDGEMSEPFMSPAGWHIVLKKGHQNFYSYDSQRDAIMKYIDQRGLREQIINAKLDTLSK 265
>gi|169825994|ref|YP_001696152.1| foldase protein prsA 1 [Lysinibacillus sphaericus C3-41]
gi|168990482|gb|ACA38022.1| Foldase protein prsA 1 precursor [Lysinibacillus sphaericus C3-41]
Length = 319
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 85/267 (31%), Gaps = 41/267 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T L + V + S S I T+ G+ I+ D +++ L L+++
Sbjct: 3 KTVLSLTLAASVLALGACSGGDSKAIVTSKVGD-ISVADFNEKAKSLT---GPYVLQQMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++++ + + A G + FS L + G+ + FK
Sbjct: 59 TEKVLSDKY----------EVTDKEFKEAYDVTASQFG---DSFSQALAESGLTEEGFKD 105
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
L +Q + +K+ + + + E R +L
Sbjct: 106 SLRVQLLQEKALKDQAIKEEDVKKYYEQMK---------TELNGRHIL------------ 144
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ 254
++ ++++ + K S + G+ + + +F + +
Sbjct: 145 VADEKTAKEVIAKIKGGAKFADVAKEYSTDTGSAEKGGELGWFSVGSMVDEFNDAAYALE 204
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGG 280
N + P T G I I DKRD+
Sbjct: 205 LNTLSEPVQTSFGYHVIEITDKRDVKD 231
>gi|157736637|ref|YP_001489320.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri RM4018]
gi|157698491|gb|ABV66651.1| peptidyl-prolyl cis-trans isomerase [Arcobacter butzleri RM4018]
Length = 269
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 91/301 (30%), Gaps = 48/301 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKINGELEKIAV 77
+ + I + + T+NGE IT DI+ R+ KL E + +
Sbjct: 5 VSSLVASIALATALNAADVSYATVNGENITKQDIAMALQDPRVDFDKL---PQEAKTQIL 61
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++++ L Q G+ D+ V + N L +
Sbjct: 62 EQIVNMKLIAQHAIDDGVEKDAKYV-EAMKKIKSNLALEVWQKNEI------------DK 108
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + + K K K + + +L +
Sbjct: 109 IKV----------------TEADKKDFYEKNKEKFVEPETFEASHILVKT-------EAE 145
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257
+ I +++ ++ K +K + G + P+F + +K T
Sbjct: 146 AKDIISQLDKAPNKVEKFKELSKKSLDTASAKNGGALGRFAVEQMVPEFGSAVKALAKGT 205
Query: 258 --TNPYVTQKGVEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P TQ G I + DK ++ ++ + K E V+ LR +A
Sbjct: 206 YSKTPVKTQFGYHVIYLKDKFPSKTFAYTEVEKNINQVLIGNALNKKIKELVEDLRKDAK 265
Query: 314 I 314
I
Sbjct: 266 I 266
>gi|319941578|ref|ZP_08015904.1| hypothetical protein HMPREF9464_01123 [Sutterella wadsworthensis
3_1_45B]
gi|319804948|gb|EFW01790.1| hypothetical protein HMPREF9464_01123 [Sutterella wadsworthensis
3_1_45B]
Length = 633
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/388 (14%), Positives = 109/388 (28%), Gaps = 89/388 (22%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIA 61
+ F ++ ++ F++ F + I SY S + IT + D++KR
Sbjct: 3 QAFREHKRWLMVIAMVFIIPSFVVTGIYSYNRMTQSDNSIVKVGEVSITPENFDLAKRQQ 62
Query: 62 LLKLQKINGEL-------EKIAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
L +L++ GE A ++L+ E Q + K+ I+
Sbjct: 63 LERLRQEMGESFHASLLDTPQAREDLLRMLMDEAAINQVVAKNHISVSEAQAVALIKNAD 122
Query: 109 -HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------------- 150
+ SAE + FL QG D F + VV
Sbjct: 123 ALKVDGKFSAERYEQFLRSQGKSDQQFVMEIRNDLAKEAVVSGVSATYPVPKALTEQFYE 182
Query: 151 ----------------DFMLKYGNLEMEIPANKQK-MKNITVRE---------------- 177
D++ K + EI A +K+ E
Sbjct: 183 ILTEERSVRTLVLPADDYLDKVAVTDEEIKAYYNAHLKDFLSPEHIKAQYVVFSPDAFSN 242
Query: 178 -----------YLIRTVLFSIPDNKLQNQGFV------QKRIKDAEESRLRLPKDCNKLE 220
Y +++P+ + + + + K AEE + D +K
Sbjct: 243 QKASLDDLKTFYEQNKQRWTVPEERRASHILIEFGDDKEAARKKAEELANEVKADPSKFA 302
Query: 221 KFASKI-----HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ A G + + F++ + + + P T+ G I + D
Sbjct: 303 ELAKANSVDTGSAEQGGDLSFFGRGVMTKAFEDAVFNAKKGDIVGPIETEFGWHVIYVTD 362
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEA 302
E + + +
Sbjct: 363 IHPAAVEPFEDVKSEIEREYAQQQAIRE 390
>gi|113970826|ref|YP_734619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4]
gi|113885510|gb|ABI39562.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-4]
Length = 621
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 51/169 (30%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + S +NG+ IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSQSDVPAAEVNGDKITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + + +++ ++ L+ + L Q G+ +
Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAA 168
>gi|15892803|ref|NP_360517.1| protein export protein prsA precursor [Rickettsia conorii str.
Malish 7]
gi|20138841|sp|Q92H91|PLP_RICCN RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl
cis-trans isomerase plp; AltName: Full=Rotamase plp;
Flags: Precursor
gi|15619985|gb|AAL03418.1| protein export protein prsA precursor [Rickettsia conorii str.
Malish 7]
Length = 282
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 95/294 (32%), Gaps = 30/294 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S ++A ++ T G + + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYVNNLLLK---EEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + NK + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---SQKEANDIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
K ++L +K S + IG L P+F + N +
Sbjct: 161 LSKGGNFTKLAEELSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVST 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L + A
Sbjct: 217 PVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYIADLEAKAN 268
>gi|152980145|ref|YP_001353225.1| peptidyl-prolyl cis-trans isomerase [Janthinobacterium sp.
Marseille]
gi|151280222|gb|ABR88632.1| peptidyl-prolyl cis-trans isomerase [Janthinobacterium sp.
Marseille]
Length = 638
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 22/203 (10%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKL 65
+ ++ L + F + + SY S SS ++G+ IT + D ++R + +
Sbjct: 7 THQRLMQFLLLLVIFPSFALFGLESYTSMGDSSTTVAKVDGQAITQPEWDAAQREQMERF 66
Query: 66 QKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA---- 110
+++ G E ++ + LI + + E +++ ++ T+ + A
Sbjct: 67 RQMFGGQFDPKMFDTPEAKQDVLDGLIAQRVLAAEAKRNKLSVSDQTLQQTIMGIAGLTT 126
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ E + S L QG+ ++ L I V + + Q++
Sbjct: 127 ADGKFDVERYKSLLAAQGMTPAMYEASLRQDLIVQQV-----NAAIQSTAFAPDSLAQRL 181
Query: 171 KNITVREYLIRTVLFSIPDNKLQ 193
+ +E ++ + F D Q
Sbjct: 182 SELGEQEREVQYLTFKAADYASQ 204
>gi|262198048|ref|YP_003269257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum
DSM 14365]
gi|262081395|gb|ACY17364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliangium ochraceum
DSM 14365]
Length = 342
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 93/302 (30%), Gaps = 48/302 (15%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIALLKLQKINGELEKIAVQELIV 82
P +S T+N EVIT I+++ ++ + + E +K + L+
Sbjct: 40 ASPAAETQSQTDVDAPLATVNDEVITVGDFQSQINRQAPYVRARYTSTEQKKEFLDTLVS 99
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ E ++ G D V Q L E F+ L + I + + Y
Sbjct: 100 FEVMAAEAQRRGFDKDP-EVVRTLKQVMIQ-KLVKEQFTDELKPEDIPEEELRAYF---- 153
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ EY R L ++ K +
Sbjct: 154 -----------------------------DEHKEEYQ-RPDQVRAAAIVLDDKASADKLL 183
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYL--LESDLH-PQFQNLLKKSQNNT 257
+A+ + + L SK D S G + SD+ P + N
Sbjct: 184 SEAKAAAEKNHVAFRNLVTAHSKDGDSKNSGGDLGFFDKSSSDVPAPVIEAAFALDSNQV 243
Query: 258 TNPYVTQKG-VEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ G I I +R + +K L + K K + ++V L+ A I
Sbjct: 244 SDVIDAGNGRFYIIKITGRRKAMSKSFDDVKRQLLNRVYRDKRVKMQEDFVAALKEKATI 303
Query: 315 HY 316
+Y
Sbjct: 304 NY 305
>gi|160890578|ref|ZP_02071581.1| hypothetical protein BACUNI_03021 [Bacteroides uniformis ATCC 8492]
gi|270295715|ref|ZP_06201915.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317479880|ref|ZP_07938997.1| ppic-type ppiase domain-containing protein [Bacteroides sp. 4_1_36]
gi|156859577|gb|EDO53008.1| hypothetical protein BACUNI_03021 [Bacteroides uniformis ATCC 8492]
gi|270273119|gb|EFA18981.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|290769660|gb|ADD61440.1| putative protein [uncultured organism]
gi|316903954|gb|EFV25791.1| ppic-type ppiase domain-containing protein [Bacteroides sp. 4_1_36]
Length = 455
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 108/306 (35%), Gaps = 43/306 (14%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISK-RI-ALLKLQK 67
+K + +I+F + +V + + + E I ++ + R+ AL + +K
Sbjct: 1 MKQCMNFKFVILFALTLLVGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRK 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL---- 115
+ + + +E+ V+ L + I + V N + +
Sbjct: 61 FDRDPYCVIPEEIAVQKLYLHQAALDSIEVSESEVIQRVDYMTNMYIANIGSREKMEEYF 120
Query: 116 --SAEDFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQK 169
++ L ++G+ +Q L + I P V+ F + IP
Sbjct: 121 NKTSSQIRETLRENAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIP----- 175
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ ++ ++ P L+ V++R+++ + R+ + + L + S+
Sbjct: 176 ------TQVEVQ-IITQQPKVPLEEIEDVKRRLREYTD-RVNKGESFSMLARLYSEDRGS 227
Query: 230 SIGKAQYLLESD--LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
++ + L P + N+ + + + ++ G I + +KR G+
Sbjct: 228 AMRGGEIEFSGRGMLDPAYANVAFNLQDPSKVSKIVESEYGFHIIQLIEKR---GDRIKT 284
Query: 286 AYLSAQ 291
++ +
Sbjct: 285 RHILLK 290
>gi|172060877|ref|YP_001808529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
gi|171993394|gb|ACB64313.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
Length = 260
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 93/284 (32%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRAMIESFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L DN+ Q + + K A+
Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFDQV-KAQIAQQIVQQKLQAFEEG----LRQQAKIQ 260
>gi|253681295|ref|ZP_04862093.1| foldase protein PrsA [Clostridium botulinum D str. 1873]
gi|253562533|gb|EES91984.1| foldase protein PrsA [Clostridium botulinum D str. 1873]
Length = 348
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/344 (12%), Positives = 109/344 (31%), Gaps = 43/344 (12%)
Query: 13 IKLLTTYFVLIIFCI----VPIVSYKSWAMSSRIRTTINGEVITDGDISK---------- 58
I+ L VL IF + ++ A+ + + IT G++
Sbjct: 4 IRKLVATAVLCIFTMSAVGCSMIEKTPEAIKKTVVAKVGDRKITKGELDSHFGVKRYLDQ 63
Query: 59 -RIALLKLQKINGELEKIAVQELIV--------ETLKKQEIEKSGITFDSNT----VNYF 105
+ + + N ++++ Q I E LK QE E+ + + ++
Sbjct: 64 FKQQYGENFEQNPQIKEQVKQIKIAVAKQIASQEALK-QEAERLKLVPNDQELKKEIDKK 122
Query: 106 FVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ + + L G+ + F+ + I + +N+ + EI
Sbjct: 123 TEEFKKEQHIKDNKGLDEALKMSGLQKSDFENIIKDNIIIEKL-QNELTKNIKVDDKEIE 181
Query: 165 ANKQKMKN------ITVREYLIRTVLFSI--PDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
K K+ + + ++ + P++ + + ++ ++ +
Sbjct: 182 KYYNKNKDNYPKDPKNPTKIHVAHIILKVKTPEDDAKAKDEIKSIKEELNKGAD-FAVLA 240
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
K + SK + +G + L ++P TQ G I + +
Sbjct: 241 KKYSQDGSKDNGGDLGTVPAINSKFDQDFMNAALTLKDGEISDPVKTQFGYHIIKMIKRE 300
Query: 277 DLGGEIALKAYLSAQ---NTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + + K E ++ K+++ A + +
Sbjct: 301 EAPCKTFAEVKNQVKEDILQNKKSEVINNKF-KEIQDKASLKIF 343
>gi|206561958|ref|YP_002232721.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia J2315]
gi|198037998|emb|CAR53944.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia J2315]
Length = 272
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/316 (18%), Positives = 101/316 (31%), Gaps = 63/316 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL--E 73
+T +L I + +S A ++ T+NG IT D+ LL+
Sbjct: 1 MTPNRLLTIVALAGALSGPVHAQTAATVATVNGTPITQTDVDT---LLRASGQPDSPQIR 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGDN 132
+ +LI L +Q EK+ D V + ++AE
Sbjct: 58 QAIKNQLITRVLVQQAAEKANY-ADKPEVKAAM----QQAKVTAEVQL------------ 100
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ + ++ + + + VK + E+ A K E+ R ++ P
Sbjct: 101 YLRDHVKPEPVTDEQVKARY--------DELVAALGKN------EFKPRLIVVKDPVAAA 146
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLL---------ESDL 242
S L+ K + L + S + G+ ++ + L
Sbjct: 147 TV------------LSELKAGKSFDGLARQYSVAPSRDTGGELPWVSFNTPAVEGRTAGL 194
Query: 243 H-PQFQNLLKKSQNNTTNPYVTQKGV-EYIAICDKR--DLGGEIALKAYLSAQNTPTKIE 298
P Q L K S T + GV + + KR + G K L Q E
Sbjct: 195 PLPVAQALEKLSVGAVTKDSIPVDGVRAIVKLDAKRPTQVPGFETAKPTLQQQLQAIAAE 254
Query: 299 KHEAEYVKKLRSNAII 314
K A+ + L +A I
Sbjct: 255 KASAQMIGNLLKDAKI 270
>gi|183219611|ref|YP_001837607.1| putative signal peptide [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909750|ref|YP_001961305.1| hypothetical protein LBF_0181 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774426|gb|ABZ92727.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778033|gb|ABZ96331.1| Conserved hypothetical protein; putative signal peptide [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 349
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/326 (12%), Positives = 96/326 (29%), Gaps = 21/326 (6%)
Query: 11 DFIKLLTTYFVLIIF--CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------A 61
F + F ++ VP S+ + + + + I+ D + +
Sbjct: 6 RFQRYFVFIFAAVVSVSLTVPTNPLGSYESLNAVLAIVGPKSISTLDYEEGVERYKNLSR 65
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV-QHARNTGLSAEDF 120
+ G L + LI + ++ I + + + E F
Sbjct: 66 FFPNYRKKGSLHSQVIDFLIDRAVVDNVADEESIQVNEKRIEAEIQKRMEAQGISDLEQF 125
Query: 121 SSFLDKQ-GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
+ Q + + + L Q +++ E E+ + K K E+
Sbjct: 126 KKSVQSQFNLPYDVWLDDLPYQIKKGQLLQIKVSPPL-PSEQEVQSWYNKNKAKVGNEFK 184
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC---NKLEKFASK--IHDVSIGKA 234
R ++FS + ++ + + + + L+ P + S+ ++ +
Sbjct: 185 FRELVFSPANGSIEEESRLFNELTEIRNKSLQDPSFFKLVASGPRNESRYRLNGGLVNYV 244
Query: 235 QYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQ 291
P ++L + Q + + + + I R + K +
Sbjct: 245 PTFELYKTQPTTASVLAQVGGQGKFSEVFRDDRKRYCLVYIEGMRPTPLDAVRKG-IQGF 303
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHYY 317
K + E+V R N I +
Sbjct: 304 LFREKEQTSFEEWVVATRKNTSITIF 329
>gi|28209963|ref|NP_780907.1| peptidylprolyl isomerase [Clostridium tetani E88]
gi|46396876|sp|Q899I2|PRSA_CLOTE RecName: Full=Foldase protein prsA; Flags: Precursor
gi|28202398|gb|AAO34844.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium tetani
E88]
Length = 339
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 110/331 (33%), Gaps = 46/331 (13%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-------SKRIALLK 64
F LL + ++ A+ + + IT G++ + L +
Sbjct: 11 FTALLFALLFSMSIAGCNMIEKTPEAIEKSPVAKVGKKTITRGELDTYPILAEQLTKLKE 70
Query: 65 LQKINGELEKIAVQELIV------ETLKKQEI---EKSGITFDSNTVNYFFVQ-----HA 110
+ +LI E + ++EI + + D+ V +
Sbjct: 71 QFGGDLSKNAEIKDQLIQFKSQVLEQMIQEEIVFEKSEELKVDNAKVEKEVEKNLKNFMD 130
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ + + + L K G + K++ Q I +V ++ + +
Sbjct: 131 QGFQGNKDKYKEDLKKMGTTEESIKRFFKAQVITEEV------------SKQVVKDVKVD 178
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH--- 227
N + Y F++ Q + K ++A++ + RL K ++K A ++
Sbjct: 179 DNTAKKHYEESKYTFTVNKPTFHAQHVLVKTEEEAKKVKARLDKG-EDIKKIAKELSIDP 237
Query: 228 --DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL------ 278
+ G S + F + ++K ++ + P +Q G I + DK ++
Sbjct: 238 SAKENSGDLGKAPYSSMVKPFADAIVKLNKGEISQPVKSQFGYHVIKLIDKDEVTFKDFN 297
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ +K L + ++ K+L+
Sbjct: 298 SVKEQIKKDLLETEKRKVFNEKIEQWKKELK 328
>gi|88860449|ref|ZP_01135087.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)
[Pseudoalteromonas tunicata D2]
gi|88817647|gb|EAR27464.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)
[Pseudoalteromonas tunicata D2]
Length = 633
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/369 (11%), Positives = 102/369 (27%), Gaps = 94/369 (25%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + V++ F + I SY + + +NG+ I+ ++
Sbjct: 1 MLEKIREGSQGLTAKIILGLVILSFALAGIGSY-LGQTTEKPVAVVNGQKISQTTFARAY 59
Query: 59 ---RIA--------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R ++ + + + L+ + L+ Q + G+ +
Sbjct: 60 ENERSRLEQQFGEYFNQIASDPTYMARVREGVIDRLVQQELQTQLANELGLRISDEAIKE 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150
S + + + + + F+ YL + +V
Sbjct: 120 EIRTLPYFNIGGQFSNDRYLQVIRQMNFQPDTFRNYLRTEMTRSQLVTAVAASDFALPNE 179
Query: 151 -----DFMLKYGNLEMEIPANKQKMKNITVREYLIR------------------------ 181
+ +L+ + Q K+ITV E I
Sbjct: 180 MVTISQLQTQVRDLDYVLLTADQVSKDITVTEQEISDYYTLNQSQFLSQEQVSVEYVELN 239
Query: 182 -------------TVLFSIPDNKLQ-----------------NQGFVQKRIKDAEESRLR 211
+L DNK Q + + ++L+
Sbjct: 240 AETLPVVKAVTDDEILALYNDNKAQYVEPERRRVAHILVDLGDDEAASEAKAQDLLAKLK 299
Query: 212 LPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGV 267
D +L + S + + G ++ + P F+ ++ + ++ ++ G
Sbjct: 300 AGADFAQLAQSDSSDIVSAENGGDLDWIDRDMMDPAFEEAAFSLAAKGDISDVVKSEFGF 359
Query: 268 EYIAICDKR 276
I + D +
Sbjct: 360 HIIKLTDLQ 368
>gi|149912930|ref|ZP_01901464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
AzwK-3b]
gi|149813336|gb|EDM73162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
AzwK-3b]
Length = 285
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 52/307 (16%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-ISKRIALLKL--QKING 70
KL ++ + + + T+NG IT G I+ R +L Q
Sbjct: 6 KLFPALAIVAAVGFAQAPAAQDSPDIDTVLATVNGTDITLGHMIALRASLPAQYGQLPPE 65
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + +LI +TL Q E + ++ + L L+ +
Sbjct: 66 ILFNGILDQLIQQTLLMQSFE---------------GEVSKRSAL-------VLENE--- 100
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ +V++ + +++ ++ EY +L +
Sbjct: 101 --------RRAILATEVIEKVMQGALTDADIQAAYEERYASAGQETEYKAAHILVETEET 152
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNL 249
++ D L + S + G + + F N
Sbjct: 153 ARDLIAQLE------------GGADFATLARENSTGPSGPNGGDLGWFGPGVMVESFFNA 200
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + P TQ G I + + R E + A+ T ++ +V L
Sbjct: 201 VASLEPGQVSEPVQTQFGWHVIKLNETRLT--ETPPLEEVRAEIEETLQQEKFDAHVDTL 258
Query: 309 RSNAIIH 315
A I
Sbjct: 259 TDQATIE 265
>gi|226309756|ref|YP_002769650.1| hypothetical protein BBR47_01690 [Brevibacillus brevis NBRC 100599]
gi|226092704|dbj|BAH41146.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 88/249 (35%), Gaps = 20/249 (8%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-LSAEDFSSFL-DKQGIGD 131
K + ++I + QE ++SGIT D + Q + G + +F + L + G
Sbjct: 58 KQVLNDMINREVVFQEAKRSGITVDPKQLEQELSQIRDSYGSRTDSEFEAALIKQAGTTV 117
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
KQ ++ Q + + D +K + E+ + R +R + K
Sbjct: 118 EALKQEISYQILLQTLATKDMTIK----DEELINVYNSRSDRYTRPMQVRLGQIVVASQK 173
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNL 249
Q + ++ + + V+ G ++ D L + + +
Sbjct: 174 EAEQVLADLKNGADFQTIAK--------ARSIDADTAVNGGDVGWVSIKDNRLPDEAKPI 225
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVK 306
++K ++ + Q + ++R+ +K L + ++E + ++
Sbjct: 226 VEKLEKDKYSEAIKIQDQYVIYQLRERREASQRTFEEVKDELRREMAFAQVESLDV-VLE 284
Query: 307 KLRSNAIIH 315
+LR + +
Sbjct: 285 RLRKSVGVQ 293
>gi|75764532|ref|ZP_00744003.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74487981|gb|EAO51726.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 268
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 102/291 (35%), Gaps = 48/291 (16%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
+S + S I TT +G I++ D +K+ LK L ++ V++++ + K
Sbjct: 4 TLSLSACGSSDTIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMVVEKVLDDKYK--- 56
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVV 148
V + G ++F+++++ G+ ++ K+ L + + +
Sbjct: 57 -------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVKNEDQLKEKLKLTFAFEKAI 106
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
K K K+ + + +L K IK+
Sbjct: 107 KATVTEK-------------DFKDHYKPKLQVSHILVK--------DEKTAKEIKE---- 141
Query: 209 RLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
+L +D L K S+ G+ + +F++ K + + P +
Sbjct: 142 KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKLEVGQLSEPVKSSF 201
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
G I + DK++L K + + +I+ + + + L NA I
Sbjct: 202 GYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLKNADI 252
>gi|26989028|ref|NP_744453.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
KT2440]
gi|24983852|gb|AAN67917.1|AE016424_3 peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas putida
KT2440]
Length = 623
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 25/184 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V + QHA+ +S + Y+ ++ K+ F
Sbjct: 203 VKVSDEEVKAHYDQHAKEF-MSPDQVVI-------------DYI-------ELKKSAFFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + E+ A +K + +L + N + R ++ E+ +
Sbjct: 242 QVKVTDEELKAQYEKEIANLAEQRHAAHILIEV--NDKVTDAQAKARAEEIEQRLAKGED 299
Query: 215 DCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
++F+ + G + P F+ L K Q + P T+ G I +
Sbjct: 300 FAALAKEFSQDPGSANTGGDLGFAGPGVYDPAFEEALYKLQDGQVSAPVRTEFGYHLIKL 359
Query: 273 CDKR 276
+
Sbjct: 360 LGVQ 363
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60
Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q E + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + SAE F + + G G F++ L + + + + + ++
Sbjct: 121 QTPEFQVDGKFSAERFDQVIRQMGYGRMQFREMLGEEMLIGQL-RTGLAGSSFVTDQQVD 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|325300050|ref|YP_004259967.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
salanitronis DSM 18170]
gi|324319603|gb|ADY37494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
salanitronis DSM 18170]
Length = 457
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 95/286 (33%), Gaps = 36/286 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGEL 72
L +V ++ + + + + + + E I D+ + A + + +G+
Sbjct: 5 RLMKCYVCLLLSLAGVSVFAQDNVIDEVVWVVGDEAILKSDVENERLNAQYENRHFDGDP 64
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF--------VQHARNTGL------SAE 118
+ +EL V+ L + E I V Q + +
Sbjct: 65 YCVIPEELAVQKLFLHQAELDSIIVSDQEVIQQVEQRISWLTEQIGSREKMEEYYNKTYT 124
Query: 119 DFSSFLD---KQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
L + G+ +Q + + P V+N F + T
Sbjct: 125 QIREMLRENIRDGLTVQQMQQEIVGDIKLTPAEVRNYFNKLPQDS---------IPFVPT 175
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IG 232
E I T IP+ +++ V+ ++++ + + + L +F S+ + G
Sbjct: 176 QVEVQIITQEPKIPETEIER---VKAQLREYADRVNKGETSFSTLARFYSEDPGTARRGG 232
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ + +L P+F N++ + + T+ G + +KR
Sbjct: 233 EGGFTGRGELVPEFANVVFNLTDTKKVSKVFETEFGFHIAQLIEKR 278
>gi|313885841|ref|ZP_07819584.1| PPIC-type PPIASE domain protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924745|gb|EFR35511.1| PPIC-type PPIASE domain protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 472
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 95/264 (35%), Gaps = 12/264 (4%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVE 83
P + ++ + T+ E I +I + ++ Q + G + ++L V+
Sbjct: 30 AQTPQQKTSAGSVVDEVIWTVGDEPILKSEIENQKLYMRSQGMPLEGNPDCYLTEQLAVQ 89
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L + + I+ D+ V+ F + + + ++ I ++
Sbjct: 90 MLFLNQAKIDSISVDNTKVDRFVDNFMESLVQQIGSRERLEEYFNRPYSSIREQQRIMAV 149
Query: 144 WPDVVK---NDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
++V+ + EI A + + + + VL PD +L
Sbjct: 150 NNEIVRQMQQKIIQGVAVTPTEIRSYYAQIPQDSLPYIPDVVEVQVLRITPDIELAAIDQ 209
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQNLLKKSQ- 254
++++++ + + +D + + + S+ S+ + ++ S L P+F ++
Sbjct: 210 IKEQLRSYSDDIVAGRRDFSTIARLYSQDSRTSLRGGEYGFVARSSLEPEFAQVVFALSD 269
Query: 255 -NNTTNPYVTQKGVEYIAICDKRD 277
+ T G + + +KRD
Sbjct: 270 TKQVSPIIRTATGYHIVQLIEKRD 293
>gi|260576192|ref|ZP_05844185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sp. SW2]
gi|259021672|gb|EEW24975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter sp. SW2]
Length = 285
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/312 (10%), Positives = 91/312 (29%), Gaps = 53/312 (16%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSW-AMSSRIRTTINGEVITDGDISKRIALLK--L 65
++ F K T + + + + + T+NG IT G + +L+ L
Sbjct: 1 MAKFAKFWPTVALGAACAFGMALPVSAEDLTAETVVATVNGTNITLG----HMIVLRDGL 56
Query: 66 QKINGELEKIAVQELIVETLKKQEI--EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+L + + I++ L +Q + G T +
Sbjct: 57 PAQYSDLPDDVLFKGILDQLIQQSALEQSLGGTLTKRD-------------------TLS 97
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
L+ + ++ + ++ + + EY +
Sbjct: 98 LENS-----------RRGYLSGVALQAAVAGAVTDESLQAAYDAKYAHAEPTTEYHAAHI 146
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
L D++ + + + A+ + L + + + G + +
Sbjct: 147 LV---DSEEKAKALKTQIDGGADFAELAIANSSDG--------SAANGGDLGWFGLGMMV 195
Query: 244 PQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
F++ ++ + P TQ G + + + R + + +
Sbjct: 196 KPFEDAVVALKPGEVSAPIQTQFGWHLVKLTETRVANA--PALDDVRDELAGEIEQAALT 253
Query: 303 EYVKKLRSNAII 314
+++KL + A +
Sbjct: 254 AHIEKLTAAATV 265
>gi|167754419|ref|ZP_02426546.1| hypothetical protein ALIPUT_02713 [Alistipes putredinis DSM 17216]
gi|167659044|gb|EDS03174.1| hypothetical protein ALIPUT_02713 [Alistipes putredinis DSM 17216]
Length = 469
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 83/278 (29%), Gaps = 21/278 (7%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70
L VL IF + K M R+ + G I ++ + L Q+
Sbjct: 6 LFCAALVLAIFA---GAAQKRQVMLDRVVAVVGGSSILWSEVDEYAGELVEQRRQQGYTS 62
Query: 71 --ELEKIAVQELIVETLKKQEIEKSGITFD--------SNTVNYFFVQHARNTGLSAEDF 120
+ A+++L+++ L + + + L +
Sbjct: 63 DRDPHDEALEQLLMQKLLFNQALIDSVDVSYSGIAQRVEAHLQALIDDAGSIAALETKQH 122
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ + + +++ Q V + G +E +Y+
Sbjct: 123 MPIFNVREMLRQRYEEQAYAQ-AMQSSVVGKIKVIPGEVERYYKKTDPDSLPTIPEQYVY 181
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLE 239
+ P + + + ++R+ D E ++ + + + S +S G+
Sbjct: 182 AQIT-RFPASIKEAKQRTKERLLDMRERIIKGQTRFDIMARMYSMDGSAISGGELDPQPL 240
Query: 240 SDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR 276
QF + L + TQ G I + D++
Sbjct: 241 DGFVRQFADALADLKPGQVSEVVETQYGYHLIQLIDQK 278
>gi|328465802|gb|EGF36990.1| protein export protein [Listeria monocytogenes 1816]
Length = 266
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 46/297 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LE 73
+ +L + ++ + S + + T +G D+++ ++ G ++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKTDSG------DVTQDELYDAMKDKYGSEFVQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ ++++ + K V+ F ++ G + FS+ L + G+ +
Sbjct: 55 QLTFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKS 101
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK L +V+ + +K + + + +NK +
Sbjct: 102 FKSQLKYNL----LVQKATEANTDTSD----KTLKKYYETWQPDITVSHI-LVADENKAK 152
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-- 251
K + D + + G+ + P F+
Sbjct: 153 EVEQKLKDGAKFADLAKEYSTDTATKD---------NGGQLAPFGPGKMDPAFEKAAYAL 203
Query: 252 KSQNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
K++ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 204 KNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|227113469|ref|ZP_03827125.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 626
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/322 (11%), Positives = 105/322 (32%), Gaps = 34/322 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ ++ + + ++ F + + Y +NG+ IT + + +
Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRAQLEQAV 59
Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ ++ +L + A+ +LI ETL Q K G+ +
Sbjct: 60 QNERSRQQETLGENFSLLASNDGYMQQLRRQALSQLIDETLLDQYANKLGLNISDEQIKQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ E + + + G+ + + Q L Q +++ +GN
Sbjct: 120 AIFDVPAFQTDNRFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRG-----FGNTAF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+P + + ++ ++R I + ++++ + +
Sbjct: 175 LLPQEIDNLVKLAAQDRVVRVATIDIAAKAKAQTVADDEIQSYYDQNKGNFIAP-EEFKV 233
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ SI + ++ ++ + +++++ + P + V I K +
Sbjct: 234 SYITLDAASIMDGVKVDDAAIN----DFYEQNKSGYSQPERKKFSV----IQVKNEADAA 285
Query: 282 IALKAYLSAQNTPTKIEKHEAE 303
L A + T ++ +
Sbjct: 286 SVLDALKQGGDFATLAKEKSTD 307
>gi|238650638|ref|YP_002916490.1| protein export protein prsA precursor [Rickettsia peacockii str.
Rustic]
gi|238624736|gb|ACR47442.1| protein export protein prsA precursor [Rickettsia peacockii str.
Rustic]
Length = 282
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/304 (17%), Positives = 94/304 (30%), Gaps = 50/304 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKING-----ELEK 74
+ +IF V ++S ++A ++ T G + + I K L LQ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKNFDDFPP 63
Query: 75 IAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++LI L K+E+ KS IT S L+ ++ + K I
Sbjct: 64 QDQEKLIKIYVNNLLLKEEVAKSNIT-SSKEFQEKLEN--AKNQLAQQELLANYIKSNIT 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
DN F N ++ E + + +L +
Sbjct: 121 DNMFDDEY-----------NKYVGNLKGKE----------------QIKVAHILVK---S 150
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249
+ + K K ++L +K S + IG L P+F +
Sbjct: 151 QKEANYIKTKLSKGGNFTKLAEELSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKA 206
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
N + P T G I + +K+ + I K + +Y+ L
Sbjct: 207 FALKVNEVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYIADLE 264
Query: 310 SNAI 313
+ A
Sbjct: 265 AKAN 268
>gi|328956331|ref|YP_004373664.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coriobacterium
glomerans PW2]
gi|328456655|gb|AEB07849.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Coriobacterium
glomerans PW2]
Length = 404
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/341 (14%), Positives = 108/341 (31%), Gaps = 35/341 (10%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTING-----EVITD------ 53
V ++ F LL+ + + + KS+ ++ + T+NG + IT+
Sbjct: 40 VLVAIGVFAMLLSVTTMACAGIMNQAKTKKSYELTGGVAATVNGVNIKEDSITEQIMQTK 99
Query: 54 ----GDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
D ++ A L+ + EL K ++ L + L + +K IT + +N +
Sbjct: 100 EGGKYDTDEKWAKYLVDSNQTPEELRKTKIKSLAKQYLIEDAEKKHDITVSDDELNDDWK 159
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ S + F + K G+ + +K + +K + + + +I
Sbjct: 160 DQVKKYD-SEQAFIDQIKKMGMTEASYKSSIRNSL-MQKKLKEEVAPEKDPSDQDIIDYV 217
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK-----DAEESRLRLPKDCNKLEKF 222
K + +LF I + K L K +
Sbjct: 218 NKDISKYNDARRSSNILFKIESGADEQSDAKVKEKAQGVLDKINSGELTFEDAAEKYSED 277
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
D G + + ++Q+ L + + + + G I + G
Sbjct: 278 DGSKKDK--GDVGWDKLTTFVKEYQDALNNLAADQVSGLVKSTYGYHIIRCTGYFHVDGT 335
Query: 282 I----ALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAII 314
+ + + + + T + ++ + L A I
Sbjct: 336 VNSIDQIPKNMKEKISDTIKKDSSSKAYTAWEDDLVDKADI 376
>gi|239832961|ref|ZP_04681290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
intermedium LMG 3301]
gi|239825228|gb|EEQ96796.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
intermedium LMG 3301]
Length = 456
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALL--KLQKINGELEK-IAVQELIVETLKKQEIEKSGIT 96
+++ T+NG+ IT G++ + L + ++ E + A+ LI E EK +
Sbjct: 186 TKVLATVNGKDITVGEVDQAAGDLDPQFSRLPAEQRRLAALAALIDIKAMAGEAEKEKLD 245
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ FL ++ + + +FK + + I D V+ +
Sbjct: 246 QSK--------EFKDRM--------EFLRERALHNEYFKDAV-VDKISDDDVRARY---- 284
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+K+ E R +L + +A +L
Sbjct: 285 ---------DKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLAGGAKF 323
Query: 217 NKLEKFASKIHDVS-IGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P +Q G I +
Sbjct: 324 EDLAKESSTDGTASNGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQSQFGFHVIQLE 383
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 384 DRRTKQ--PPAFDQVKDQIRSIIMRERYVETVKKLRDGMKIDY 424
>gi|116873652|ref|YP_850433.1| prsA protein, export protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742530|emb|CAK21654.1| prsA protein, export protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 291
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 68/219 (31%), Gaps = 28/219 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
V+ F ++ G + F++ L + G+ + FK L +V+
Sbjct: 67 KVSDEDVDKKFKEYKAQYG---DQFAAVLAQSGLTEKTFKSQLKYNL----LVQKATEAN 119
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ + + + + K + K + D
Sbjct: 120 TDTSD----KALKEYYKTWQPDITVSHI-LVADEKKAKEVEQKLKDGAKFSDLAKEYSTD 174
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI- 272
E + G+ + P F+ K++ + + P TQ G I +
Sbjct: 175 TATKE---------NGGQLAAFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMD 225
Query: 273 ---CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKK 307
+ A+KA YL++Q T ++K + K
Sbjct: 226 EPATKTTFDKDKKAVKASYLTSQLTNENMQKTLKKEFKD 264
>gi|94967775|ref|YP_589823.1| hypothetical protein Acid345_0744 [Candidatus Koribacter versatilis
Ellin345]
gi|94549825|gb|ABF39749.1| hypothetical protein Acid345_0744 [Candidatus Koribacter versatilis
Ellin345]
Length = 343
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/333 (15%), Positives = 110/333 (33%), Gaps = 24/333 (7%)
Query: 5 VFTSLSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
V S+S + ++ + V ++ +NG V+T+ D+ + +
Sbjct: 11 VLISVSAAFAQMASHAPTAVAKERTATTSVPAARPVDETKPVARVNGTVLTERDLLREMY 70
Query: 62 --LLKLQKING-------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ NG E+ K A+Q ++ E L QE + ITFD + ++ + +
Sbjct: 71 TIFPYAAQHNGVPKKMEPEMRKGALQMIVFEELVYQEAVRRKITFDPSIISKGEAEMRKQ 130
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKM 170
S ++F +++ Q + + + ++K + K + + A
Sbjct: 131 FP-SQQEFDAWIVAQFGSRQAMHEKMRRTMLVQILLKKEVNDKSVVTDAQAKAFYEANSK 189
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-- 228
+ + I+T+ P + + K + A K+ D
Sbjct: 190 QFDRPETFSIQTISIIPPQGANPEVKKEADKRAHDAFKAAKATKTYEEFGLLAEKVSDDD 249
Query: 229 --VSIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL- 284
V +G + + + L P + L ++ + + G
Sbjct: 250 WHVKMGDRKAIDRASLPPDVVKAALVMKPGEVSDLIQIGPNYTMFRL-NAHTPAGRTPFG 308
Query: 285 --KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
KA L K E+ + K+LR +A +
Sbjct: 309 EVKAKLQEDMKKAKTEQLRGSFDKQLRQSAKVE 341
>gi|226941261|ref|YP_002796335.1| peptidyl-prolyl cis-trans isomerase [Laribacter hongkongensis
HLHK9]
gi|226716188|gb|ACO75326.1| Probable peptidyl-prolyl cis-trans isomerase [Laribacter
hongkongensis HLHK9]
Length = 607
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 68/231 (29%), Gaps = 20/231 (8%)
Query: 97 FDSNTVNYFFVQHARNT-----GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
V A L+A F + F + P+ V+ +
Sbjct: 154 VSPGAVERVHKLLAEQRQINQYRLTAAQFLPGVKVDDADVQRFYDSNKARFQTPEKVRLE 213
Query: 152 FML--------KYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
++L E ++ + K + + + +L ++P K
Sbjct: 214 YVLLSLEELAKTVQVSEADVRKYYEEHKAELAGDEQRQVAHILIAVPKGASAADKARLKT 273
Query: 202 IKDAEESRLRL-PKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+A +R P L + S G + + F++ K ++
Sbjct: 274 EAEAIVKEVRSNPARFAALAQEKSADPGSAAKGGDLGWFGRGVMVKPFEDSAFKLAKGQV 333
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++P T+ G I + + ++A + A+ K + ++ L
Sbjct: 334 SDPVETEFGYHIIKVEGIK-TPDLSTMQADIHARLARQKAGALYRQQLETL 383
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 19/212 (8%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ IK++ L V + A + GE I DI + L Q +
Sbjct: 9 TLVIKIILGAVALTFVGFG--VGSYTAATDDAYLAKVGGEKIYKQDIER---ALNGQPAD 63
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDK 126
+ + ++ LI + L + + G+ + N ++ + +L
Sbjct: 64 SAVRQQVLESLIRQKLLLADAGQHGMRVTDAELRRVIAGIPAFQDNGHFDSKRYEEYLQS 123
Query: 127 QGIGDNHFKQYLA----IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
Q + F+ + +Q V F+ + +Q+ N +Y +
Sbjct: 124 QYMSAEQFQARIRDELMVQQQLSAFVDATFVSPGAVERVHKLLAEQRQIN----QYRLTA 179
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
F +P K+ + +R D+ ++R + P+
Sbjct: 180 AQF-LPGVKVDDADV--QRFYDSNKARFQTPE 208
>gi|83309610|ref|YP_419874.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magneticum AMB-1]
gi|82944451|dbj|BAE49315.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magneticum AMB-1]
Length = 320
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 87/309 (28%), Gaps = 48/309 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+K+L ++ + ++ + + +NG I +++ Q
Sbjct: 46 SLMKMLFARRPMLALSLAAGLAASPAIAADSVVANVNGSDIKMSQLAE----YGRQMGPQ 101
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ ++ I L ++ ++ + D V +
Sbjct: 102 APYEAVLEVAINNQLVYEQAKRDKLDADP-DVKAALKR---------------------- 138
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ L Q++ V+ + + + + + E R +L +
Sbjct: 139 ---VEIQLMAQALMQKKVRGAVTDEAVKVRYDQAVKNFQPQE----EVHARHILAETEEG 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL- 249
+ + + AE ++ R G Y ++ + P+F
Sbjct: 192 ARSIIADLNRGMDFAELAKTRSKD----------TGSGAMGGDLGYFVQGAMVPEFAAAA 241
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ P TQ G I + DKR I E+ + + V +L
Sbjct: 242 FAMRPGELSKTPVKTQFGYHVIKVEDKR--MASIPPYDQAKPVIARQIAEELQEKMVVEL 299
Query: 309 RSNAIIHYY 317
R A I +
Sbjct: 300 REKAKIKRF 308
>gi|119774365|ref|YP_927105.1| peptidyl-prolyl cis-trans isomerase D [Shewanella amazonensis SB2B]
gi|119766865|gb|ABL99435.1| peptidyl-prolyl cis-trans isomerase D [Shewanella amazonensis SB2B]
Length = 615
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + T+NGE I + +
Sbjct: 1 MLEKIREGAQGTIAKSILVLVILSFAFTGVSSYLGSSTEPA-AATVNGEEIPVSALEQAF 59
Query: 59 RIALLKLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ ++++ GE + + ++ +I + L Q + G+ +
Sbjct: 60 QNEKARMEQQLGEMFQTLAADDNYLRSIRQGVLERMIADKLLDQTASEMGLRISDEQIKQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLE 160
++ E + + L + G N F+ + + +V + E
Sbjct: 120 AIMEEPAFQTEGKFDNERYLAILRQLGYQTNSFRDMMRVDMTRRQLVNALIGSEFVLPSE 179
Query: 161 MEIPANKQKM 170
+ A Q
Sbjct: 180 SKAVAELQGQ 189
>gi|326792525|ref|YP_004310346.1| copper amine oxidase-like domain-containing protein [Clostridium
lentocellum DSM 5427]
gi|326543289|gb|ADZ85148.1| copper amine oxidase-like domain-containing protein [Clostridium
lentocellum DSM 5427]
Length = 444
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 91/316 (28%), Gaps = 43/316 (13%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGEL---EKIAVQ---- 78
V+ + + IT +I + +L+ Q + + A Q
Sbjct: 137 TVAITPGITGHAVVAKVGDLTITAKEILTQLDYEMMMLQYQYQYDDSFFETEEAKQYMEQ 196
Query: 79 ---ELIVETLKKQEI----EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
EL+ +K + + + VN F + + +A +F L G+
Sbjct: 197 RKGELVDYIIKNKVALIKGRELKLEPTVTEVNNEFNKT-KEDYETAAEFEKALVNSGLTT 255
Query: 132 NHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIP 188
+K + +V ++ + EI A + +L +
Sbjct: 256 EGYKTQIKDSLTISNV--AKYISKNIPVTDAEIKAYYESNSGNYTMPPGAEMAHILVATE 313
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL--ESDLHPQF 246
+ + K AE ++ + G+ Y+ S F
Sbjct: 314 EEAKAIKAEYDKGTSFAELAKKYGTDGTKD-----------TGGELGYIAYDSSYYDQDF 362
Query: 247 QNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + +NP TQ G I + + ++ L+ + I + E+
Sbjct: 363 LDGAKTLEEGQVSNPVKTQFGWHLIKVLNVHKEAYKVLLE-EIKEDLKNIIISEKATEFI 421
Query: 305 ---VKKLRSNAIIHYY 317
+ + I Y
Sbjct: 422 YSQLDEWGKEMTIEKY 437
>gi|226224827|ref|YP_002758934.1| post-translocation molecular chaperone [Listeria monocytogenes
Clip81459]
gi|254825217|ref|ZP_05230218.1| rotamase [Listeria monocytogenes FSL J1-194]
gi|254853343|ref|ZP_05242691.1| export protein [Listeria monocytogenes FSL R2-503]
gi|254992110|ref|ZP_05274300.1| post-translocation molecular chaperone [Listeria monocytogenes FSL
J2-064]
gi|255520683|ref|ZP_05387920.1| post-translocation molecular chaperone [Listeria monocytogenes FSL
J1-175]
gi|300763971|ref|ZP_07073967.1| protein export protein [Listeria monocytogenes FSL N1-017]
gi|225877289|emb|CAS06003.1| Putative post-translocation molecular chaperone [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258606707|gb|EEW19315.1| export protein [Listeria monocytogenes FSL R2-503]
gi|293594463|gb|EFG02224.1| rotamase [Listeria monocytogenes FSL J1-194]
gi|300515312|gb|EFK42363.1| protein export protein [Listeria monocytogenes FSL N1-017]
Length = 293
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 46/297 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LE 73
+ +L + ++ + S + + T +G D+++ ++ G ++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKTDSG------DVTQDELYDAMKDKYGSEFVQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ ++++ + K V+ F ++ G + FS+ L + G+ +
Sbjct: 55 QLTFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKS 101
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK L +V+ + +K + + + +NK +
Sbjct: 102 FKSQLKYNL----LVQKATEANTDTSD----KTLKKYYETWQPDITVSHI-LVADENKAK 152
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-- 251
K + D + + G+ + P F+
Sbjct: 153 EVEQKLKDGAKFADLAKEYSTDTATKD---------NGGQLAPFGPGKMDPAFEKAAYAL 203
Query: 252 KSQNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
K++ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 204 KNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|46908453|ref|YP_014842.1| protein export protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47094429|ref|ZP_00232114.1| protein export protein [Listeria monocytogenes str. 4b H7858]
gi|254931668|ref|ZP_05265027.1| rotamase [Listeria monocytogenes HPB2262]
gi|67461025|sp|Q71XE6|PRSA2_LISMF RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|46881724|gb|AAT05019.1| protein export protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017195|gb|EAL08043.1| protein export protein [Listeria monocytogenes str. 4b H7858]
gi|293583223|gb|EFF95255.1| rotamase [Listeria monocytogenes HPB2262]
gi|328472118|gb|EGF42993.1| post-translocation molecular chaperone [Listeria monocytogenes 220]
gi|332312671|gb|EGJ25766.1| Foldase protein prsA 1 [Listeria monocytogenes str. Scott A]
Length = 293
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 97/297 (32%), Gaps = 46/297 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE--LE 73
+ +L + ++ + S + + T +G D+++ ++ G ++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKTDSG------DVTQDELYDAMKDKYGSEFVQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ ++++ + K V+ F ++ G + FS+ L + G+ +
Sbjct: 55 QLTFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKS 101
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK L +V+ + +K + + + +NK +
Sbjct: 102 FKSQLKYNL----LVQKATEANTDTSD----KTLKKYYETWQPDITVSHI-LVADENKAK 152
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-- 251
K + D + + G+ + P F+
Sbjct: 153 EVEQKLKDGAKFADLAKEYSTDTATKD---------NGGQLAPFGPGKMDPAFEKAAYAL 203
Query: 252 KSQNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
K++ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 204 KNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|189463692|ref|ZP_03012477.1| hypothetical protein BACINT_00023 [Bacteroides intestinalis DSM
17393]
gi|189438642|gb|EDV07627.1| hypothetical protein BACINT_00023 [Bacteroides intestinalis DSM
17393]
Length = 454
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 108/300 (36%), Gaps = 44/300 (14%)
Query: 20 FVLIIFCIVPIVSYKSW----AMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
F ++ C + +++ + + + + E I ++ + R+ A + +K +G+
Sbjct: 7 FKFVVLCALALMTGSAVYGQDNVIDEVVWVVGDEAILKSEVEEARMSAAYEGRKFDGDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + I + V N + + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAALDSIEVPESEVIQRVDYMTNMYIANIGSREKMEEYFNKTSSQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L ++G+ +Q L + I P V+ F + IP
Sbjct: 127 IRETLRENAREGLKVQKMQQKLVGEIKITPAEVRRYFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GK 233
+ ++ ++ P L+ V++R+++ E R+ + + L + S +I G+
Sbjct: 176 TQVEVQ-IITQQPKIPLEEIEDVKRRLREYTE-RVNKGESFSMLARLYSDDRGTAINGGE 233
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ L P F N+ + N + ++ G I + +KR G+ ++ +
Sbjct: 234 MPFTGRGYLDPAFANVAFNLQDPNKVSKIVESEYGFHIIQLMEKR---GDRIKVRHILLK 290
>gi|330829914|ref|YP_004392866.1| peptidylprolyl cis-trans isomerase D [Aeromonas veronii B565]
gi|328805050|gb|AEB50249.1| Peptidylprolyl cis-trans isomerase D [Aeromonas veronii B565]
Length = 637
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 59/186 (31%), Gaps = 20/186 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57
M K+ + + +++ F + + SY + + T+NG I+ +
Sbjct: 2 MLDKLREGAQGKVAKVILGLIILSFALAGVGSYLN-GPARTAPATVNGTEISAAALENAY 60
Query: 58 ----KRI------ALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R+ A +L + + + LI + L + + G+ +
Sbjct: 61 RNERARMESQMGEAFSQLAANPDYMKQFRRGVLDRLIDQALLDSKARELGLRISDEQIKQ 120
Query: 105 F---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ A N + + + + + G+ F+ L + ++ ++
Sbjct: 121 AIVAMPEFAENGKFNNDRYLQLIRRAGMTPEMFRDSLRQDMVRQQLMSALLGTEFSLKGE 180
Query: 162 EIPANK 167
+K
Sbjct: 181 AEQLDK 186
>gi|50120091|ref|YP_049258.1| peptidyl-prolyl cis-trans isomerase [Pectobacterium atrosepticum
SCRI1043]
gi|49610617|emb|CAG74062.1| peptidyl-prolyl cis-trans isomerase D [Pectobacterium atrosepticum
SCRI1043]
Length = 626
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/385 (11%), Positives = 117/385 (30%), Gaps = 87/385 (22%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ ++ + + ++ F + + Y +NG+ IT + + +
Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRAQLEQAV 59
Query: 61 ALLKLQKIN----------------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ ++ +L + A+ +LI ETL Q K G+ +
Sbjct: 60 QNERSRQQETLGENFSLLASNDGYMQQLRRQALSQLIDETLLDQYANKLGLNISDAQIKQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150
N E + + + G+ + + Q L Q +++
Sbjct: 120 AIFDVPAFQTNNRFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRGFGNTAFLLPQE 179
Query: 151 ----------DFMLKYGNLEMEIPANKQKMKNITVREY---------------------L 179
D +++ +++ A Q + + V+ Y
Sbjct: 180 IDNLVKLAAQDRVVRVATIDIAAKAKAQTVADDEVQSYYDQNKGNFIAPEEFKVSYITLD 239
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKD-AEESRLRLPKDCNKLEKFASKIHDV--------- 229
+++ S+ + F ++ D ++ R + K E A+ + D
Sbjct: 240 AASIMDSVKVDDKAINDFYEQNKNDYSQPERKKFSVIQVKNEAEAASVLDSLKQGGDFAA 299
Query: 230 -------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ G ++ E+ + + + + + + G + + D +
Sbjct: 300 LAKEKSTDIISRRNGGDLGWMDENSMIDELKQAKLTEKGQVSAAIKSSVGYLIVRLDDVQ 359
Query: 277 DLGGE--IALKAYLSAQNTPTKIEK 299
+ ++A ++ + K +
Sbjct: 360 PQQVKPLSEVRAEIAEKVKHEKAQD 384
>gi|241763913|ref|ZP_04761956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax
delafieldii 2AN]
gi|241366808|gb|EER61240.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax
delafieldii 2AN]
Length = 261
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 98/310 (31%), Gaps = 59/310 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + + + + + I +NG+ + +R +L+ Q
Sbjct: 1 MKKQLLSGLVAAAVLGTMALPVSAQNI-AIVNGKAVP----KERAEVLRQQVERSGRPVT 55
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSN-TVNYFFVQHARNTGLSAEDFSSFLDKQG 128
E+E +E+I + QE +K G+ + V +
Sbjct: 56 PEMEGQIKEEVIAREIFMQEAQKRGLEASPDYKVQMELAR-------------------- 95
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSI 187
Q+I + D+ + EI A K + + +EY +L
Sbjct: 96 ------------QTILIRELFADYQKNNTVTDAEIQAEYDKFVAANSGKEYKASHILV-- 141
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF- 246
+ + + + K A+ + + + G + + +F
Sbjct: 142 -EKEADAKAIIASIKKGAKFEEIAKKQSKDPG-------SGAKGGDLDWANPASYVSEFT 193
Query: 247 QNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ L+K + T P +Q G I + D R ++ + Q ++ A++
Sbjct: 194 EALIKLDKGKMTDAPVKSQFGWHVIRLDDVRQ--AQLPKLDEVKPQIAQQLQQQKLAKFQ 251
Query: 306 KKLRSNAIIH 315
++LR+ A +
Sbjct: 252 EELRAKAKVE 261
>gi|148548673|ref|YP_001268775.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
F1]
gi|148512731|gb|ABQ79591.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
F1]
Length = 623
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 25/184 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V + QHA+ +S + Y+ ++ K+ F
Sbjct: 203 VKVSDEEVKAHYDQHAKEF-MSPDQVVI-------------DYI-------ELKKSAFFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + E+ A +K + +L + N + + R ++ E+ +
Sbjct: 242 QVKVTDEELKAQYEKEIANLAEQRHAAHILIEV--NDKVSDAQAKARAEEIEQRLAKGED 299
Query: 215 DCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
++F+ S G + P F+ L + Q + P T+ G I +
Sbjct: 300 FAALAKEFSQDPGSATSGGDLGFAGPGVYDPAFEEALYQLQNGQVSAPVRTEFGYHLIKL 359
Query: 273 CDKR 276
+
Sbjct: 360 LGVQ 363
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60
Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q E + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + SA+ F + + G G F++ L + + + + + ++
Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFREMLGEEMLIGQL-RTGLAGSSFVTDQQVD 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|217963619|ref|YP_002349297.1| foldase protein PrsA [Listeria monocytogenes HCC23]
gi|217332889|gb|ACK38683.1| foldase protein PrsA [Listeria monocytogenes HCC23]
Length = 293
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 100/295 (33%), Gaps = 42/295 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + + T +G+V T ++ +K + + ++++
Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGDVVKTDSGDV-TKDEL---YDAMKDKYGSEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + FS+ L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKSFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + + + + + + + +NK +
Sbjct: 104 SQLKYNL----LVQKATEANTDTSDKVLKKYYETWQ----PDITVSHI-LVADENKAKEV 154
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KS 253
K + D E + G+ + P F+ K+
Sbjct: 155 EQKLKDGAKFADLAKEYSTDTATKE---------NGGQLAPFGPGKMDPAFEKAAYALKN 205
Query: 254 QNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
+ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 206 KGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|229586913|ref|YP_002845414.1| Protein export protein prsA precursor [Rickettsia africae ESF-5]
gi|228021963|gb|ACP53671.1| Protein export protein prsA precursor [Rickettsia africae ESF-5]
Length = 282
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 95/294 (32%), Gaps = 30/294 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S ++A ++ T G + + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYINNLLLK---EEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + NK + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---SQKEANDIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
K ++L +K S + IG L P+F + N +
Sbjct: 161 LSKGGNFTKLAEELSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVST 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L + A
Sbjct: 217 PVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKKYIADLEAKAN 268
>gi|47097568|ref|ZP_00235100.1| protein export protein [Listeria monocytogenes str. 1/2a F6854]
gi|224498964|ref|ZP_03667313.1| hypothetical protein LmonF1_04383 [Listeria monocytogenes Finland
1988]
gi|254826892|ref|ZP_05231579.1| export protein [Listeria monocytogenes FSL N3-165]
gi|254831344|ref|ZP_05235999.1| hypothetical protein Lmon1_08297 [Listeria monocytogenes 10403S]
gi|254899079|ref|ZP_05259003.1| hypothetical protein LmonJ_04684 [Listeria monocytogenes J0161]
gi|254912780|ref|ZP_05262792.1| protein export protein [Listeria monocytogenes J2818]
gi|254937107|ref|ZP_05268804.1| export protein [Listeria monocytogenes F6900]
gi|255025820|ref|ZP_05297806.1| hypothetical protein LmonocytFSL_04835 [Listeria monocytogenes FSL
J2-003]
gi|284802666|ref|YP_003414531.1| hypothetical protein LM5578_2422 [Listeria monocytogenes 08-5578]
gi|284995808|ref|YP_003417576.1| hypothetical protein LM5923_2373 [Listeria monocytogenes 08-5923]
gi|47014054|gb|EAL05055.1| protein export protein [Listeria monocytogenes str. 1/2a F6854]
gi|258599272|gb|EEW12597.1| export protein [Listeria monocytogenes FSL N3-165]
gi|258609709|gb|EEW22317.1| export protein [Listeria monocytogenes F6900]
gi|284058228|gb|ADB69169.1| hypothetical protein LM5578_2422 [Listeria monocytogenes 08-5578]
gi|284061275|gb|ADB72214.1| hypothetical protein LM5923_2373 [Listeria monocytogenes 08-5923]
gi|293590774|gb|EFF99108.1| protein export protein [Listeria monocytogenes J2818]
Length = 293
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 105/299 (35%), Gaps = 50/299 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + + T +G+V T ++ +K + + ++++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDV-TKDEL---YDAMKDKYGSEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + FS+ L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKSFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + +K + + + +NK +
Sbjct: 104 SQLKYNL----LVQKATEANTDTSD----KTLKKYYETWQPDITVSHI-LVADENKAKE- 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-- 253
V++++KD E+ L K S D + L + +K+
Sbjct: 154 --VEQKLKDGEK--------FADLAKEYST--DTATKDNGGQLAPFGPGKMDPAFEKAAY 201
Query: 254 ----QNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
+ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 202 ALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|259503634|ref|ZP_05746536.1| foldase PrsA1 [Lactobacillus antri DSM 16041]
gi|259168408|gb|EEW52903.1| foldase PrsA1 [Lactobacillus antri DSM 16041]
Length = 318
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 29/254 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T +G IT + + K +Q++I
Sbjct: 6 LIAVIAGAALMLPLAACGNKAVATTSGGKITQSEYYSSMK-------ATSNGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + ++E G VN + + G FSSFL + G+ + FKQ L
Sbjct: 59 LDKVLEKE---YGKQVSDKQVNAQYNSYKSQYG---SQFSSFLQQNGMTEKSFKQQLRSN 112
Query: 142 SIWPDVVKND---FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ V++ + + Q + + + + ++ + + + + F
Sbjct: 113 LLLEAAVRDYSHITNKRINAQWKKYQPKVQTAEILVGSKNDAQDIIDQLNSSSDKYKTFK 172
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ + +S + D + +A + L K+ TT
Sbjct: 173 KLAKSKSTDSSNKNNGGRVPAFDNTDNSLDSAYKEAAFKL-------------KTGEYTT 219
Query: 259 NPYVTQKGVEYIAI 272
P T G + I +
Sbjct: 220 TPVKTDDGYQVIYM 233
>gi|20808476|ref|NP_623647.1| parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter
tengcongensis MB4]
gi|20517095|gb|AAM25251.1| Parvulin-like peptidyl-prolyl isomerase [Thermoanaerobacter
tengcongensis MB4]
Length = 264
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 23 IIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQ 78
++ I+P+ + + S+ +++G IT ++ + A LK + + EL K A++
Sbjct: 5 VLLLILPVFALSILSGCGSKQIASVHGIPITQAELEREKAFLKNDFAKMSDEELTKTALE 64
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + + E +K GI +N + T L+ ED L
Sbjct: 65 NLKAKKAVEYEAQKEGIAVTDEELNKAWQNIKDKTKLTKEDLKDIL 110
>gi|49484083|ref|YP_041307.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425953|ref|ZP_05602377.1| foldase prsA [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428618|ref|ZP_05605016.1| foldase prsA [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431255|ref|ZP_05607632.1| foldase prsA [Staphylococcus aureus subsp. aureus 68-397]
gi|257433935|ref|ZP_05610293.1| foldase prsA [Staphylococcus aureus subsp. aureus E1410]
gi|257436851|ref|ZP_05612895.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus
M876]
gi|282904416|ref|ZP_06312304.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus C160]
gi|282906239|ref|ZP_06314094.1| foldase prsA [Staphylococcus aureus subsp. aureus Btn1260]
gi|282909157|ref|ZP_06316975.1| foldase prsA [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911464|ref|ZP_06319266.1| foldase prsA [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914636|ref|ZP_06322422.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M899]
gi|282919602|ref|ZP_06327337.1| foldase prsA [Staphylococcus aureus subsp. aureus C427]
gi|282924982|ref|ZP_06332648.1| foldase prsA [Staphylococcus aureus subsp. aureus C101]
gi|283958594|ref|ZP_06376045.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503708|ref|ZP_06667555.1| foldase prsA [Staphylococcus aureus subsp. aureus 58-424]
gi|293510729|ref|ZP_06669434.1| foldase prsA [Staphylococcus aureus subsp. aureus M809]
gi|293537271|ref|ZP_06671951.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M1015]
gi|295428419|ref|ZP_06821048.1| foldase prsA [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297590614|ref|ZP_06949252.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus MN8]
gi|56749225|sp|Q6GFL5|PRSA_STAAR RecName: Full=Foldase protein prsA; Flags: Precursor
gi|49242212|emb|CAG40919.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|257271647|gb|EEV03793.1| foldase prsA [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275459|gb|EEV06946.1| foldase prsA [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278203|gb|EEV08851.1| foldase prsA [Staphylococcus aureus subsp. aureus 68-397]
gi|257282028|gb|EEV12165.1| foldase prsA [Staphylococcus aureus subsp. aureus E1410]
gi|257284202|gb|EEV14325.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus subsp. aureus
M876]
gi|282313348|gb|EFB43744.1| foldase prsA [Staphylococcus aureus subsp. aureus C101]
gi|282317412|gb|EFB47786.1| foldase prsA [Staphylococcus aureus subsp. aureus C427]
gi|282321817|gb|EFB52142.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M899]
gi|282325159|gb|EFB55469.1| foldase prsA [Staphylococcus aureus subsp. aureus WBG10049]
gi|282327421|gb|EFB57716.1| foldase prsA [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331531|gb|EFB61045.1| foldase prsA [Staphylococcus aureus subsp. aureus Btn1260]
gi|282596034|gb|EFC00998.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus C160]
gi|283790743|gb|EFC29560.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920116|gb|EFD97184.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus M1015]
gi|291095374|gb|EFE25639.1| foldase prsA [Staphylococcus aureus subsp. aureus 58-424]
gi|291466620|gb|EFF09141.1| foldase prsA [Staphylococcus aureus subsp. aureus M809]
gi|295127819|gb|EFG57456.1| foldase prsA [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575500|gb|EFH94216.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus MN8]
gi|312437694|gb|ADQ76765.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus TCH60]
gi|315195752|gb|EFU26139.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus
subsp. aureus CGS00]
Length = 320
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 83/237 (35%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFKKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K ++ + G I D E K L + K++K+
Sbjct: 217 EKALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNSE---KQSLKEKLVDQKVQKNPK 270
>gi|147119|gb|AAA24304.1| unknown [Escherichia coli str. K-12 substr. W3110]
Length = 98
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 231 IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G + P F++ L + ++ + P + G I + D R++ A + +
Sbjct: 8 GGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRA 67
Query: 290 AQN-TPTKIEKHEAEYVKKLRSNA 312
+ K + A ++++ R++A
Sbjct: 68 YRMLMNRKFSEEAASWMQEQRASA 91
>gi|307718672|ref|YP_003874204.1| basic membrane protein [Spirochaeta thermophila DSM 6192]
gi|306532397|gb|ADN01931.1| basic membrane protein [Spirochaeta thermophila DSM 6192]
Length = 346
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/343 (14%), Positives = 117/343 (34%), Gaps = 41/343 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KIN 69
++L +++ + P A +R++ T EVIT + LL+ Q +++
Sbjct: 1 MRLWKIVLGVVVMGLFPAFGQIIDAPVARVKLT-KLEVITQRQFKADVELLEKQLGRELS 59
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--GLSAEDFSSFLD-K 126
E K + I E L Q E+ ++ ++ Q+ ++ +S ++F ++ +
Sbjct: 60 LEERKQLLDARIGEILIYQAAEREYLSVTQEELSQAIAQYKQSVAPNVSDQEFQRLIESQ 119
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL-- 184
G+ F++ + + I + + N+ +++ N + + ++
Sbjct: 120 GGMTWEQFQEQMKKRLIAEKYLYQKKGQEIQNVPAPSEEEIRRVYNENISNFTAPEMVRY 179
Query: 185 -FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLL 238
D + + +K A + + + K + K D G YLL
Sbjct: 180 SHIFIDTRGLSDEEKKKAYNRALQVKKEVDGSLAKFREAVEKYSDDQASRYQGGDVGYLL 239
Query: 239 ESDLH-------PQFQNLLKKSQNNTTNPYVTQKGVEYIAIC-----------------D 274
+D F + N ++ + G + +
Sbjct: 240 RTDKQRESFLGKEFFSKIFSLPLNKVSDVLASNVGYHIVVVTEHHEPRLLGLDDRLLPNS 299
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+ + +I Q +K + +++LRS A + Y
Sbjct: 300 KQTVRDQITALLV--GQKRQEAYQKALQKLIEELRSQADVSIY 340
>gi|260886177|ref|ZP_05736674.2| putative peptidyl-prolyl cis-trans isomerase [Prevotella tannerae
ATCC 51259]
gi|260850470|gb|EEX70339.1| putative peptidyl-prolyl cis-trans isomerase [Prevotella tannerae
ATCC 51259]
Length = 487
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 98/305 (32%), Gaps = 52/305 (17%)
Query: 10 SDFIKL-LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
S ++KL L+ +L+ + I ++ + + + TING I R
Sbjct: 4 SPYMKLKLSFGLILLSLFAINIEQLQAQSANDPVIMTINGRPIL------RSEFEYSYNK 57
Query: 69 NGELEKIAVQELIVE--------TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
NG+ + ++ + E LK E++ I + + F
Sbjct: 58 NGKEAAVVEKKSVDEYAEMFLNYKLKVAAAERARID-------------------TTKAF 98
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ F+ Y +Q P +V F+ + + K++
Sbjct: 99 K----------DEFRTYRDLQLT-PFMVDQAFIDSTAIALYDNMKTRLGGKDLLRP---- 143
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLL 238
+LFS+ N + K D+ + + L K S ++ + ++
Sbjct: 144 AHILFSVKQNATAAEKETAKMRADSVYQVIMNGGNFAALAKEYSGDLGSALRGGEISWIG 203
Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
+F+ K + P +T G I + +++ L L+ + +
Sbjct: 204 PGATVKEFEEAAYKLKVGEVSQPVLTPFGYHIIKMQERKQLEPYAELRDQILYSLKQQGV 263
Query: 298 EKHEA 302
++ A
Sbjct: 264 DEISA 268
>gi|290893167|ref|ZP_06556155.1| rotamase [Listeria monocytogenes FSL J2-071]
gi|290557329|gb|EFD90855.1| rotamase [Listeria monocytogenes FSL J2-071]
Length = 293
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 100/295 (33%), Gaps = 42/295 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + + T +G+V T ++ +K + + ++++
Sbjct: 1 MKKKLILGLVMVMALFSLAACGGGGDVVKTDSGDV-TKDEL---YDAMKDKYGSEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + FS+ L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKSFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + + + + + + + +NK +
Sbjct: 104 SQLKYNL----LVQKATEANTDTSDKVLKKYYETWQ----PDITVSHI-LVADENKAKEV 154
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KS 253
K + D E + G+ + P F+ K+
Sbjct: 155 EQKLKDGAKFADLAKEYSTDTATKE---------NGGQLAPFGPGKMDPAFEKAAYALKN 205
Query: 254 QNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
+ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 206 KGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|332703851|ref|ZP_08423939.1| hypothetical protein Desaf_2729 [Desulfovibrio africanus str.
Walvis Bay]
gi|332554000|gb|EGJ51044.1| hypothetical protein Desaf_2729 [Desulfovibrio africanus str.
Walvis Bay]
Length = 374
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/310 (10%), Positives = 93/310 (30%), Gaps = 28/310 (9%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI- 75
T ++ + + + + S + +NG I + + ++ L + +
Sbjct: 4 ATRLLMALLASIIVTACSSDRSEPGVIAMVNGRPIHLNQLEYKYDIMYLDSTDDLNPTVN 63
Query: 76 --------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ +LI++ L QE+ G+ +N + + F L ++
Sbjct: 64 QLRTDYGTILSDLIIQELIIQELADRGLEVTDEELNK--AEDSVRKDYPEGAFEEILVEE 121
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
I + +++ + ++ E + + + YL + F I
Sbjct: 122 YIDISFWRKEFKARISIEKFLQQVLRPSIKIDYTEADSYYR---SHLSDFYLPSRLKFLI 178
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ ++ K A+K+ +V + + + E L +
Sbjct: 179 ITGPSRELVLKATQL---------FSKG-EAAADIAAKLKEVEVRQL-RMREDRLPASWL 227
Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEY 304
N L ++ + + + ++ +AY + K+ +
Sbjct: 228 NALANLEPGEASSVLTEESKFHRLILVERSPAKVLDPTQAYPLVEQVLLDQKMRDAFNAW 287
Query: 305 VKKLRSNAII 314
+ + A I
Sbjct: 288 LARKLEVATI 297
>gi|114048051|ref|YP_738601.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7]
gi|113889493|gb|ABI43544.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp. MR-7]
Length = 621
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 51/169 (30%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + S +NG+ IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSQSDVPAAEVNGDKITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + + +++ ++ L+ + L Q G+ +
Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAA 168
>gi|224368972|ref|YP_002603136.1| PpiD1 [Desulfobacterium autotrophicum HRM2]
gi|223691689|gb|ACN14972.1| PpiD1 [Desulfobacterium autotrophicum HRM2]
Length = 630
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/387 (11%), Positives = 104/387 (26%), Gaps = 106/387 (27%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGD------ISK-RIAL--- 62
++ LI+ V + A IN + IT + I + R
Sbjct: 13 IIKILLGLIVLVFVFLGMGSIGAKRGNEVAMINDQPITLNEYQRSYQNIIEQMRQRFGDN 72
Query: 63 -----LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-------- 109
L++ + ++K A+ LI E L E ++ + + + +
Sbjct: 73 LNDEILQMLQ----VKKQALDRLIDERLISGEADRLKVEVSNQELANSLLDIPAFRKNGV 128
Query: 110 ---------ARNTGLSAEDFSSFLDKQGIGDNHFKQYL------------------AIQS 142
+S E F + Q + + + + Q
Sbjct: 129 FDLATYKVVLSRNRMSPESF-EAMQLQALREQKVRDLVFSTLSVSDQEARAWYTHSKTQV 187
Query: 143 IWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+V N K ++ + K K + E ++ + F++ D + +
Sbjct: 188 GIDYLVFNPVAYKDIAVDAKALTDFYESNKEKYKSEAELTVKYLEFAVKDYQDRVTISDD 247
Query: 200 KRIK---------------DAEESRLRLPKDCNKL------------------------- 219
+ +A +R+P+D ++
Sbjct: 248 EIKAYYDENLDQYKVPEKVEARHILIRVPQDADEATVEAARNEAETIHAKAVGGEDFSLL 307
Query: 220 -EKFASKIHDVSIGKAQYL-LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ F+ G ++ + P + + + P TQ G I + K
Sbjct: 308 AKTFSQGPTKDDGGYLGTFARDAMVKPFAEAAFSLASGEISKPVRTQFGWHVIKVEAKLP 367
Query: 278 LGG---EIALKAYLSAQNTPTKIEKHE 301
+ A + + +++
Sbjct: 368 ASTTALDKVA-AEIRKTLSTAELKNLA 393
>gi|291614457|ref|YP_003524614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans
lithotrophicus ES-1]
gi|291584569|gb|ADE12227.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans
lithotrophicus ES-1]
Length = 261
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 91/275 (33%), Gaps = 47/275 (17%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGEL--EKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NG I + RI + Q K+ +LI + Q K+G+ V
Sbjct: 30 IVNGVSIPQARVDIRIKVAAQQGQPDSPEFRKVIRDDLINLEVISQAAVKNGLD-KQPDV 88
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF-KQYLAIQSIWPDVVKNDFMLKYGNLEM 161
L +Q + F + Y I DV++ ++
Sbjct: 89 AQQLE----------------LARQSVLAGAFVQDYAKSHPIGDDVLQKEYEA------- 125
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ +EY + +L D + G ++K K A+ ++ + +K
Sbjct: 126 -------LKARVGNKEYKLSHILVGTEDEAKKIAGQLKKGAKFAKIAKAQSKDPGSKN-- 176
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGG 280
+ G + + S+ F + K + + P TQ G I + D R+L
Sbjct: 177 --------NGGDLGWAVPSNFVQPFAEAVAKLKKGEVSAPVQTQYGWHIIKLEDTRELKV 228
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + + + + E ++ +RS A +
Sbjct: 229 PTFEEMKPNLEKRLQQ-QAIQKE-IEDMRSKAKVE 261
>gi|163743876|ref|ZP_02151247.1| PPIC-type PPIASE domain protein [Phaeobacter gallaeciensis 2.10]
gi|161382817|gb|EDQ07215.1| PPIC-type PPIASE domain protein [Phaeobacter gallaeciensis 2.10]
Length = 172
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 54/161 (33%), Gaps = 14/161 (8%)
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ +++ E+ +L ++ + + A +R R
Sbjct: 5 ASDEDLRTAYDEKYTDGTGGDEFNASHILVETEEDAADIRAELDAGADFATLARER---- 60
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
++ + G+ + + + P+F+ +L + ++P TQ G I + D
Sbjct: 61 -------STGPSGPNGGELGWFSKGRMVPEFEEAVLVMGAGDVSDPVQTQFGWHVIKLND 113
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+R + + ++ + V L + A I
Sbjct: 114 RRTSAA--PTFDEVREELATQMRQEAVEDRVLSLTTAATIE 152
>gi|115378201|ref|ZP_01465373.1| peptidyl-prolyl cis-trans isomerse domain protein, putative
[Stigmatella aurantiaca DW4/3-1]
gi|115364789|gb|EAU63852.1| peptidyl-prolyl cis-trans isomerse domain protein, putative
[Stigmatella aurantiaca DW4/3-1]
Length = 589
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 80/277 (28%), Gaps = 55/277 (19%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFL 124
L + +L+ L Q E+ GI + + ++ + E + L
Sbjct: 148 ARQSLPSQVMDQLVTRELLSQAAERHGINPSDDELRKLIHENADFHKDGQFNFEQYKRAL 207
Query: 125 DK-----QGIGDNHFKQYLAIQ----------SIWPDVVKNDFMLKYGNLE--------- 160
+ + ++ LA Q + D V+ + +
Sbjct: 208 RDYYRTTEPKYEEELRRQLAAQKMLQVVNSGAVVSDDEVRARYEKDANQAKVVFARFLPT 267
Query: 161 ---MEIPA-------NKQKMKNITVREY--------------LIRTVLFSIPDNKLQNQG 196
++PA +K N + Y R +L + + Q
Sbjct: 268 MYAAQVPAPTPAQLEEFRKAHNDEISTYYESNRFMYQQAERAKARQILVKLAPDAAAQQK 327
Query: 197 FVQKRIKDAEESRLR-LPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQN-LLKK 252
K +A + KD + + S+ S G ++ + L P +
Sbjct: 328 AEAKSRAEALHKEVTEGGKDFATVARERSEDPGTKASGGDLGWVERASLEPTLAEAVFAL 387
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ N + P T+ G + + +K+ + +A
Sbjct: 388 APNGVSQPIETKLGWHVVKVEEKQAAQDKKLEEAAPE 424
>gi|115351951|ref|YP_773790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
gi|115281939|gb|ABI87456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
Length = 260
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 90/284 (31%), Gaps = 59/284 (20%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIREGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + F+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRSMIESFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A ++ REY + +L ++ ++++
Sbjct: 114 AEVKARYDELVKGAGGNREYHLHHILVE------------SEQQAKDLIAKIKGGAKFED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICD 274
L K SK + G + P+F +K Q T P TQ G I D
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTDTPVKTQFGWHIIRADD 221
Query: 275 KRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
RD+ + KA ++ Q K++ E LR A I
Sbjct: 222 IRDVAPPPFDQV-KAQIAQQIVQQKLQAFEEG----LRQQAKIQ 260
>gi|294141764|ref|YP_003557742.1| peptidyl-prolyl cis-trans isomerase D [Shewanella violacea DSS12]
gi|293328233|dbj|BAJ02964.1| peptidyl-prolyl cis-trans isomerase D [Shewanella violacea DSS12]
Length = 621
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 63/174 (36%), Gaps = 20/174 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEAA-AATVNGEDISESALEQAY 59
Query: 59 RIALLKLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV-N 103
+ +L++ G+ ++K ++ L+ E L Q + G+ + N
Sbjct: 60 QSERARLEQQMGDMFQALAANDTYLASVKKSVLERLVAEKLLDQSATELGLRVSDEQIKN 119
Query: 104 YFFVQHARNTGLSA--EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
++ A T + + + L + G N F+ + +V + +
Sbjct: 120 AIMIEPAFQTDGQFDNDRYLAILRQLGYQANTFRNMMRTDMTRRQLVASLVGSE 173
>gi|153008357|ref|YP_001369572.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi ATCC 49188]
gi|151560245|gb|ABS13743.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi ATCC 49188]
Length = 326
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 91/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALL--KLQKINGELEK-IAVQELIVETLKKQEIEKSGIT 96
S++ T+NG IT G++ + L + ++ E + A+ LI E EK +
Sbjct: 56 SKVLATVNGNDITVGEVDQAAGDLDPQFSRLPAEQRRLAALAALIDIKAMAGEAEKEKLD 115
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ FL ++ + + +FK + + I D V+ +
Sbjct: 116 QSQ--------EFKNRM--------EFLRERALHNEYFKDAV-VDKISDDDVRARY---- 154
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+K+ E R +L + +A +L
Sbjct: 155 ---------DKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 193
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S + G Y E + P+F+ T P TQ G I +
Sbjct: 194 EDLAKESSTDGTAANGGDLGYFAEGQMVPEFEKAAFALKPGEYTKEPVQTQFGFHVIQLE 253
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 254 DRRTKQ--PPAFDQVKDQIRSIIMRERYVETVKKLRDGMKIDY 294
>gi|288924570|ref|ZP_06418507.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae D17]
gi|288338357|gb|EFC76706.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae D17]
Length = 474
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 89/270 (32%), Gaps = 48/270 (17%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ T +L+ + ++Y A + + T+NG ++ + G ++K
Sbjct: 1 MKTATLLVAMLLCGSMAY---AQNDPVVMTVNGAPVSRSEFEYSYN---KNNSEGVIDKK 54
Query: 76 AVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
V E + LK Q + LD
Sbjct: 55 TVGEYVDLFVNYKLKVQAA-----------------------------LDARLDTMSSFK 85
Query: 132 NHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F++Y Q + P +V D K ++ E + +L + N
Sbjct: 86 KEFREY-RDQQVRPTLVTDADVEAKARDIYRETQQRVDGGGGLLKT----SHILLLLDQN 140
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQN 248
+ Q K D+ + L+ D L + S K V+ G+ ++ + L +++
Sbjct: 141 ATKTQQDAAKARIDSVYNALKKGADFADLARRLSDDKSSAVNGGQLPWIERNQLVKAYED 200
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + P++++ G + + DK+
Sbjct: 201 VAYALKKGEISKPFLSEYGYHIVKLDDKQP 230
>gi|281423984|ref|ZP_06254897.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris
F0302]
gi|281401909|gb|EFB32740.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris
F0302]
Length = 480
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 86/283 (30%), Gaps = 35/283 (12%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIAL---LKLQKINGELEKIAVQELIVETLKK 87
VS ++ + + E I D+ + + L ++ K G + +++ V+ L
Sbjct: 45 VSVPEHSVIDEVVWVVGDEPIMKSDVEQ-MRLQGEMEGMKWGGNPDCRIPEQIAVQKLFL 103
Query: 88 QEIEKSGITFDSNTVNYFFVQ--------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+ I + + Q L + QG + + L
Sbjct: 104 HQAALDSIEVTESDIAQTVEQQINYWINSVGSREKLE--------EYQGKSLSQIRSDLH 155
Query: 140 IQSIWPDVV---KNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKL 192
++ K M ++ + + ++ E + +L P
Sbjct: 156 DDVKNSKMIQQMKRKIMSDVTVTPADVRRYFKNLPEDSIPFVPTEVEV-EILVKKPRIPQ 214
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL 250
V+ +++ + + + L + S+ + G+ Y L P F ++
Sbjct: 215 SEINRVKDQLRSFTDRVTKGETSFSTLARLYSEDPGSARQGGEMDYAGRGTLDPAFASVA 274
Query: 251 --KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ ++ G I + DKR G+ ++ +
Sbjct: 275 FNLTDPKKISKIVESEFGYHIIQLVDKR---GDKVKVRHILLK 314
>gi|87310508|ref|ZP_01092637.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula
marina DSM 3645]
gi|87286729|gb|EAQ78634.1| probable peptidyl-prolyl cis-trans isomerase [Blastopirellula
marina DSM 3645]
Length = 620
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 89/288 (30%), Gaps = 44/288 (15%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
+ + A + +N E IT ++ + A + G+ ++ +I + L +
Sbjct: 49 GVAPQGNSAPQIKTVAVVNREPITRDELGREAA-----RRFGD---EVLESVINKHLIAE 100
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL-DKQGIGDNHFKQYLAIQSIWPDV 147
E K GI ++ A+ GLS + + L D++ + ++ +WP +
Sbjct: 101 ECHKRGIQITQTEIDAEIEASAKKFGLSVDRWLGLLKDERNVSPAQYRS----DIVWPTM 156
Query: 148 VKNDFML-KYGNLEMEIPANKQKMKNITVR--------EYLIRTVLFSIPDNKLQNQGFV 198
+ + E Q V+ L + +
Sbjct: 157 ALRRLAADRLEVTQEEFSKAWQTEFGPKVKCRMISVSDRALAEELRAKAAADPDVFADMA 216
Query: 199 QKRIKDAEESRL-------RLPKDCNKLEKFASKIHDV--------SIGKAQYLLESDLH 243
+ +D + R+ ++E + D + + ES L
Sbjct: 217 KDFSEDPNSAAARGLIPPIRMNMGTPEVESLVFALKDGEVSQVLFIAGQYLIFKCESHLP 276
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
P + +K P + + VE I R G++ + AQ
Sbjct: 277 PTEVDPMK-------QPEIQNRMVEAIREQKLRSSAGDVYEELQEKAQ 317
>gi|325954018|ref|YP_004237678.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Weeksella virosa DSM
16922]
gi|323436636|gb|ADX67100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Weeksella virosa DSM
16922]
Length = 448
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 101/315 (32%), Gaps = 31/315 (9%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMS------SRIRTTINGEVITDGDISKRIALLKLQKING 70
Y VL++ + ++ +A + I + E++ D D+ + KLQ +
Sbjct: 1 MKYTVLLLTLFMCSIAQGLFAQTHKANKIEGIAAVVGDEIVLDSDVERDFQTAKLQGMEV 60
Query: 71 ELEKIAVQELIVETLKKQEIEKSG-ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ + +++E + ++ + ++ V + +D G
Sbjct: 61 KDRCEFLNNMLLEKVLIDRAKQDTLVVVTNDEVQRTLKGQIERFTQQIGSEKAVIDYFGF 120
Query: 130 G-----DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIR 181
+N + Y+ +I+ + + E+ + EY I
Sbjct: 121 KTKAELENELQYYIR-DNIYAREKRERVVSGLDATPEEVRMFFEEHKTELPDVKDEYSIS 179
Query: 182 TVLFSI---PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQY 236
++ P+N+ + +++ KD EE S+ + G+
Sbjct: 180 HIILYPEIDPENEQKVIDELKQIKKDVEE-----GSSFATKAILYSEDPGSATNGGQYLK 234
Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+ + +F + + + P+ T G I + ++ ++ ++ PT
Sbjct: 235 VKRGMMVKEFDAVAFNLDEGQVSEPFKTDFGYHIIQLEKRKGQELDL---RHILITLKPT 291
Query: 296 KIE-KHEAEYVKKLR 309
E + +R
Sbjct: 292 DEEIAKTKHKLDSIR 306
>gi|297622266|ref|YP_003703700.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera
radiovictrix DSM 17093]
gi|297163446|gb|ADI13157.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Truepera
radiovictrix DSM 17093]
Length = 398
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/317 (16%), Positives = 94/317 (29%), Gaps = 39/317 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTI---NGEVITDGDISKR--IALLKLQKING------- 70
+ + + S A + + GE ++ GD R IAL L G
Sbjct: 44 VSGGAMTGGAMTSGAAAEDPDAVVLELGGERVSAGDFEGRFNIALRNLAAQQGIPLDPVT 103
Query: 71 -----ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
L+ +++ E QE E G+ V Q G + E L
Sbjct: 104 LAQFGTLKPAFLEQFATERALLQEAEARGLAPADEAVEAELEQARAAAGENYEAL---LA 160
Query: 126 KQGIGDNH-FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G D ++ + +V + A + Y
Sbjct: 161 QGGFEDEAALRELIYESLALQGLVDA------------LEAEVEVGDEAVSAYYEANQAQ 208
Query: 185 FSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
F + V+ + +A +RL +D +L + S + G L
Sbjct: 209 FERSEEVCARHILVEDEATAEALLTRLEAGEDFGELARDNSTDPGSAPEGGDLGCLPRGV 268
Query: 242 LHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
P+F+ ++ TT P + G I + ++ E A + +Q +
Sbjct: 269 TVPEFEEAAFATEVGETTGPVRSDFGYHLIRVYERNP--AETAPLEEVRSQIEGQLRNEG 326
Query: 301 EAEYVKKLRSNAIIHYY 317
E + L + + Y
Sbjct: 327 LNERIASLVEASGVQTY 343
>gi|53715356|ref|YP_101348.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis YCH46]
gi|60683325|ref|YP_213469.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides
fragilis NCTC 9343]
gi|265767843|ref|ZP_06095375.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16]
gi|52218221|dbj|BAD50814.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis YCH46]
gi|60494759|emb|CAH09565.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides
fragilis NCTC 9343]
gi|263252515|gb|EEZ24043.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16]
gi|301164814|emb|CBW24374.1| putative exported peptidyl-prolyl cis-trans isomerase [Bacteroides
fragilis 638R]
Length = 456
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/321 (13%), Positives = 113/321 (35%), Gaps = 46/321 (14%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDIS--KRIALLKLQK 67
+K + +++F + + + S+A + I E I D+ + AL + +K
Sbjct: 1 MKKFVNFKFVVMFALALVANVASYAQDNVIDEVVWVIGDEAILKSDVEEARLAALYEGRK 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNT----VNYFF----------VQHARNT 113
+G+ + +EL V+ L + I V+Y +
Sbjct: 61 FDGDPYCVIPEELAVQKLYMHQAVLDSIEVPEAEVIQRVDYQISNYIQALGSRERMEAEF 120
Query: 114 GLSAEDFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQK 169
++ + + G+ +Q L + P V+ F + +P +
Sbjct: 121 NKTSTQIREAMRENARDGLIVQRMQQKLVGDIKVTPAEVRRYFKELPQDSIPYVPTQVEV 180
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
++ P + V++R+++ + + D + L S+
Sbjct: 181 ------------QIITQQPKIPVAEIEDVKRRLREYTDRINKGESDFSTLALLYSEDRGS 228
Query: 230 SI--GKAQYLLESDLHPQFQNL---LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI-- 282
+I G+ ++ + + P++ N+ L+ ++ + ++ G I + +KR G+
Sbjct: 229 AIKGGETGFMGKGQMVPEYANVAFNLQDTK-KISKIVESEYGFHIIQLIEKR---GDRIN 284
Query: 283 ALKAYLSAQNTPTKIEKHEAE 303
L + + ++++ A
Sbjct: 285 TRHILLKPKVSDKELDEANAR 305
>gi|254466473|ref|ZP_05079884.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales
bacterium Y4I]
gi|206687381|gb|EDZ47863.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacterales
bacterium Y4I]
Length = 273
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 14/204 (6%)
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
F++ LD+ + KQ L + P V+ + + + M N + E L
Sbjct: 56 FNAILDQL-VQQTALKQQLHGEV--PRYVELSVENEER-AMLAANVIEMVMDNASGEEAL 111
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-------KIHDVSIG 232
++ + + EE L + K+ + FA+ S G
Sbjct: 112 RAAYEEKYSSGDGGDEFHAAHILVETEEEALDVIKELDDGADFATLAKERSTGPSGPSGG 171
Query: 233 KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ + P+F+ ++K + P TQ G I + ++R E + AQ
Sbjct: 172 DLGWFTTGRMVPEFEEAVIKLRSGEVSGPVQTQFGWHVILLNERRKT--EAPEFDEVRAQ 229
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315
+K V +L + + I
Sbjct: 230 LADELQQKAVEARVNELTAASEIE 253
>gi|198276169|ref|ZP_03208700.1| hypothetical protein BACPLE_02358 [Bacteroides plebeius DSM 17135]
gi|198270981|gb|EDY95251.1| hypothetical protein BACPLE_02358 [Bacteroides plebeius DSM 17135]
Length = 467
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 103/314 (32%), Gaps = 40/314 (12%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSW-AMSSRIRTTINGEVITDGDIS--KRIALLKLQKING 70
KL+ T + I+ + V + + + + E I D+ + A + ++ +G
Sbjct: 13 KLIMTGVLAILLALTGTVPAVAQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRRFDG 72
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--------QHARNTGL------S 116
+ + +EL V+ L + E I V Q L +
Sbjct: 73 DPYCVIPEELAVQKLFLHQAEIDSIEVSDQEVLQQVETRISWLTDQIGSKEKLEEYYNKT 132
Query: 117 AEDFSSFLD---KQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ L + G+ ++ + + P V+N F Q
Sbjct: 133 STQIREMLRENIRDGLTVQEMQKKIVGDIKLTPAEVRNYFS-----------KLPQDSIP 181
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-- 230
+ ++ ++ P K + V+K ++D + + + L + S+ +
Sbjct: 182 FVPTQVEVQ-IITREPKIKEEEIERVKKELRDFTDRINKGETTFSTLARMYSEDPGSARR 240
Query: 231 IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G+ + +L P+F N++ + + T+ G + +KR G+ ++
Sbjct: 241 GGEYGFTGRGELTPEFANVVFNLTDPKKISKVFETEYGYHIAQLIEKR---GDRVSYRHI 297
Query: 289 SAQNTPTKIEKHEA 302
+ + E
Sbjct: 298 LIKPRVDEKEIEAE 311
>gi|34581487|ref|ZP_00142967.1| protein export protein prsA precursor [Rickettsia sibirica 246]
gi|28262872|gb|EAA26376.1| protein export protein prsA precursor [Rickettsia sibirica 246]
Length = 282
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 95/294 (32%), Gaps = 30/294 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S ++A ++ T G + + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYVNNLLLK---EEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + NK + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---SQKEANDIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
K ++L +K S + IG L P+F + N +
Sbjct: 161 LSKGGNFTKLAEELSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVST 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L + A
Sbjct: 217 PVKTDFGWHVIKVLEKKPVP--IPTKEEAKVTIDNILAAELLKKYIADLEAKAN 268
>gi|313617659|gb|EFR89948.1| foldase protein PrsA [Listeria innocua FSL S4-378]
Length = 291
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 28/215 (13%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
V+ F ++ G + FS+ L + G+ + FK L +V+
Sbjct: 67 KVSDEDVDKKFKEYKSQYG---DQFSAVLAQSGLTEKSFKSQLKYNL----LVQKATEAN 119
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ + + + +NK + K + D
Sbjct: 120 ADTSD----KALKEYYKTWQPDITVSHI-LVADENKAKEVEQKLKDGAKFADLAKEYSTD 174
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAIC 273
E + G+ + P F+ K++ + + P TQ G I +
Sbjct: 175 TATKE---------NGGQLAPFGSGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMD 225
Query: 274 D-----KRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
D + ++YL++Q T ++K +
Sbjct: 226 KPATKTTFDKDKKAVKESYLASQLTTENMQKTLKK 260
>gi|288575146|ref|ZP_06393503.1| hypothetical protein Dpep_2422 [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570887|gb|EFC92444.1| hypothetical protein Dpep_2422 [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 350
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 106/328 (32%), Gaps = 33/328 (10%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR------IRTTINGEVITDGDISK 58
+ +L +K + +F+L +P++ SSR I+G+ + + +
Sbjct: 1 MLRTLRTQVKWILVFFLLCFVLAIPLMYGVGGGKSSRSSNEDYAVAEIDGKKLMRSQLLR 60
Query: 59 -------RIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
R + + + + ++ + +++V+ +E++ GIT ++
Sbjct: 61 SVQDYVERAGIKDVTSTDLPMIRQMVLDQMVVQEALLKEVKALGITPSKEELDQAVSGIE 120
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ E F +L + GI N ++ L Q ++ + + E+ A +
Sbjct: 121 DQFP-TKEAFMQYLQETGITMNDLREQLKTQLS-QQMLLEEASAAAKVNDEELQALYDSV 178
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK--LEKFASKIHD 228
K+ +F++P+ + + LE+F+S
Sbjct: 179 KDF----------VFTVPEGFEVLAAEFSSQEAANKAYEELSSGTSWDVVLEEFSSSDIT 228
Query: 229 VSIGK--AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIA 283
S G +L + L + P + R++
Sbjct: 229 GSTGSEKPAFLKKDSLPENLAFIASMDDGQYAEPVEVASDDFIVVYRKSAKDREVTSFED 288
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
K L + K ++ + ++ ++
Sbjct: 289 AKEQLQSMVLNQKRQELQRTFLDEISEK 316
>gi|261403916|ref|YP_003240157.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
gi|261280379|gb|ACX62350.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
Length = 361
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/331 (18%), Positives = 117/331 (35%), Gaps = 40/331 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITD--GDIS 57
M S+ + FI +T + + K S++ G IT+ D+
Sbjct: 1 MPSRNNKAWKTFIVSITAVLSMSMIAACGNDKTKGAEEDNSKVIVKYKGGEITEKEFDLE 60
Query: 58 KRI---------ALLKLQKINGELEKI--AVQELI---VETLKKQEIEKSGITFDSNTVN 103
+R+ L++ + L K A + L + K +
Sbjct: 61 QRMIQFMSPEYAQFLQMDEFKEYLAKQGVAYEYLYAKADDKAK---------EAAEKQTD 111
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
Q + G+ E F + L+ Q + ++ K Y+ + + + +++ E
Sbjct: 112 DLLKQ--QKAGMGEEQFKAALESQKLTEDDLKNYML--RVMTVMEHEKNQVTEEDIKKEF 167
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
ANK+ NI+VR L + F + K + +G K K+ +S+L +D L K
Sbjct: 168 DANKKDYTNISVRHVL---IAFQDAEGKERPEGEALKIAKEV-QSKLNKGEDFAALAKEY 223
Query: 224 SKIHDV--SIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ S G + PQF+ L N ++P T G + + + ++
Sbjct: 224 SQDPGSKNSGGLYENKPAGSWVPQFKEKALTLELNKISDPVETDYGYHVMKVEKREEVTY 283
Query: 281 EIA---LKAYLSAQNTPTKIEKHEAEYVKKL 308
+ K + ++ KI+ + L
Sbjct: 284 DKLPADQKEGIRSELASAKIDNFMQNELNNL 314
>gi|56963292|ref|YP_175023.1| protein export protein PrsA [Bacillus clausii KSM-K16]
gi|56909535|dbj|BAD64062.1| protein export protein PrsA [Bacillus clausii KSM-K16]
Length = 345
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 19/211 (9%)
Query: 95 ITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ + +N + + S ED +F G ++ L + I P++
Sbjct: 72 MDISDDEINEMIEDLKSDYNVESDEDLVNFFTNSGYPLDNI-DQLKEELIVPEIAMKQLS 130
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + E + + R +L + V+ R+ D E
Sbjct: 131 AEGVDTSDETLQTYFEENQEQFEQITARHILVE----DEETANEVKDRLNDGE------- 179
Query: 214 KDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
D +L + S + G + P+F + N+ ++P +Q G I
Sbjct: 180 -DFAELAEEYSTDTQSAANGGDLGTFDREQMVPEFSEVAFSLDVNDISDPVESQFGFHII 238
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ DK D + + ++ Q + +
Sbjct: 239 EVTDKLDTFEDN--RDFVYDQIISEQGKDFT 267
>gi|217970665|ref|YP_002355899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T]
gi|217507992|gb|ACK55003.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T]
Length = 260
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/302 (18%), Positives = 93/302 (30%), Gaps = 57/302 (18%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIA 76
L I + ++ + A S +NG I + A+L Q+ G +L
Sbjct: 8 LAITLLAGFLALPALAASP--VAKVNGVAIPG---ERSDAMLAEQRAQGAPDGEQLRNAV 62
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ELI + QE K G+ V AR L ++ + D K+
Sbjct: 63 REELIRREVLSQEAGKRGLD-KKADVKAQME-MARQAILIRAYLQDYVRTNPVDDAELKK 120
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
E A K +M + +EY R VL D
Sbjct: 121 -------------------------EYEAIKGRMGD---KEYKPRHVLVETEDQ------ 146
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
A +RL+ ++ K + G+ + + F + + + Q
Sbjct: 147 ------AKAIIARLQGGTAFEEVAKESRDPGSKERGGELGWSNPAMYVKPFSDAMVQLQK 200
Query: 256 N--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
TT P + G I + D RD+ + Q ++ +V LR A
Sbjct: 201 GKYTTTPVKSDFGYHVIQLDDVRDVQ--PPPFEEVKPQLQQRLQQQKIERHVLDLREKAK 258
Query: 314 IH 315
+
Sbjct: 259 VE 260
>gi|157964715|ref|YP_001499539.1| protein export protein prsA precursor [Rickettsia massiliae MTU5]
gi|157844491|gb|ABV84992.1| Protein export protein prsA precursor [Rickettsia massiliae MTU5]
Length = 282
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 95/294 (32%), Gaps = 30/294 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S ++A ++ T G + + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKESQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYVNNLLLK---EEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + +K + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYSKYVGNLKGKEQIKVAHILVK---SQKEANDIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
K ++L +K S + +G L P+F + N +
Sbjct: 161 LSKGGNFTKLAEELSLDKA----SASNGGVVGYILLNQPGQLVPEFEKKAFALKVNEVST 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L + A
Sbjct: 217 PVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYISDLEAKAD 268
>gi|302876603|ref|YP_003845236.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
gi|307687277|ref|ZP_07629723.1| peptidylprolyl isomerase [Clostridium cellulovorans 743B]
gi|302579460|gb|ADL53472.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
Length = 342
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/342 (13%), Positives = 100/342 (29%), Gaps = 40/342 (11%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSY---KSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
+ KL+T + + + + + + E IT GD+ + I +
Sbjct: 1 MKSIKKLVTAALIGAMVVGATGCGFLEKTETNKAKEVVAKVGDEKITKGDVDEEIKYMIE 60
Query: 66 QKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
Q E K + L+ L Q ++ + I + + +
Sbjct: 61 QAKTQYGEDYASNEEAMKGINEQRKTTLSALVDLKLLLQYVKDNNIEINEDEMEAEVDNA 120
Query: 110 ARNTGLSA-----EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ F L G +K + I + + +I
Sbjct: 121 YKQARDQYGSGDDATFEKLLQDNGYTLEKYKDDIKNAYI-SSKAREAMSKGAEVTDADID 179
Query: 165 ANKQKMKNIT--VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A+ +K + +T ++ +L + + +K+I DA + ++ K
Sbjct: 180 ASFKKDEFLTQNANAKFVQYLLCKVESSATPEDRAAKKKIADAALAEIKGGLSFTDAAKK 239
Query: 223 ASKIHDV--SIGKAQYLLESD-LHPQFQNL-LKKSQNNTTNPYVTQ-KGVEYIAICDKRD 277
S + G + L F+N+ + + + G I +
Sbjct: 240 YSDDPSTKDNGGYLGAVTSESGLVEGFKNVAIGLNPGQMSEVVDEPTFGFFII-----KS 294
Query: 278 LGGEIALKAYLSAQ---NTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + A+ Q TK + E +++LR Y
Sbjct: 295 ISTDEAIAFEKEKQKTTLLQTKQSEKAEEILQQLRDEKSTKY 336
>gi|307571805|emb|CAR84984.1| protein export peptidyl-prolyl isomerase protein [Listeria
monocytogenes L99]
Length = 279
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 68/215 (31%), Gaps = 28/215 (13%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
V+ F ++ G + FS+ L + G+ + FK L +V+
Sbjct: 53 KVSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKSFKSQLKYNL----LVQKATEAN 105
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + + + + + + +NK + K + D
Sbjct: 106 TDTSDKVLKKYYETWQ----PDITVSHI-LVADENKAKEVEQKLKDGAKFADLAKEYSTD 160
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI- 272
E + G+ + P F+ K++ + + P TQ G I +
Sbjct: 161 TATKE---------NGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMD 211
Query: 273 ---CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
+ A+KA YL +Q T ++K +
Sbjct: 212 KPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 246
>gi|91788447|ref|YP_549399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
gi|91697672|gb|ABE44501.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
Length = 261
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/300 (17%), Positives = 98/300 (32%), Gaps = 50/300 (16%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQE 79
L+ + +++ + ++ +NG+ + + + ++E +E
Sbjct: 6 LLATAVAGLLAMGAQGAFAQNVAIVNGKAVPKARLDSLAQQIARSGRPVTPDMENQLREE 65
Query: 80 LIVETLKKQEIEKSGIT-FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I + QE EK G++ D V + AR T L E F+ + K + D K
Sbjct: 66 VIAREVFMQEAEKQGLSGTDDFKVQM---ELARQTILIRELFADYQKKNPVTDADLK--- 119
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
E + A K EY R +L
Sbjct: 120 --------------------GEYDKFAAANGGK-----EYKARHILVE-----------K 143
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNN 256
+ K S + K + +K + G + S P+F LLK ++
Sbjct: 144 EAEAKAIIASLKKGGKFEDIAKKQSKDPGSGAKGGDLDWANPSGYVPEFSEALLKLNKGQ 203
Query: 257 TT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T P +Q G I + D R+ ++ + Q ++ A + + LR A I
Sbjct: 204 LTDAPVKSQFGYHVIRVDDIRN--AQLPSFEEVKPQIAQQMQQQKLATFQEDLRKKAKIE 261
>gi|329925504|ref|ZP_08280378.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5]
gi|328939787|gb|EGG36127.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5]
Length = 361
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/331 (18%), Positives = 117/331 (35%), Gaps = 40/331 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITD--GDIS 57
M S+ + FI +T + + K S++ G IT+ D+
Sbjct: 1 MPSRNNKAWKTFIVSITAVLSMSMIAACGNDKTKGAEEDNSKVIVKYKGGEITEKEFDLE 60
Query: 58 KRI---------ALLKLQKINGELEKI--AVQELI---VETLKKQEIEKSGITFDSNTVN 103
+R+ L++ + L K A + L + K +
Sbjct: 61 QRMIQFMSPEYAQFLQMDEFKEYLAKQGVAYEYLYAKADDKAK---------EAAEKQTD 111
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
Q + G+ E F + L+ Q + ++ K Y+ + + + +++ E
Sbjct: 112 DLLKQ--QKAGMGEEQFKAALESQKLTEDDLKNYML--RVMTVMEHEKNQVTEEDIKKEF 167
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
ANK+ NI+VR L + F + K + +G K K+ +S+L +D L K
Sbjct: 168 DANKKDYTNISVRHVL---IAFQDAEGKERPEGEALKIAKEV-QSKLNKGEDFAALAKEY 223
Query: 224 SKIHDV--SIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ S G + PQF+ L N ++P T G + + + ++
Sbjct: 224 SQDPGSKDSGGLYENKPAGSWVPQFKEKALTLELNKISDPVETDYGYHVMKVEKREEVTY 283
Query: 281 EIA---LKAYLSAQNTPTKIEKHEAEYVKKL 308
+ K + ++ KI+ + L
Sbjct: 284 DKLPADQKEGIRSELASAKIDNFMQNELNNL 314
>gi|167562430|ref|ZP_02355346.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
oklahomensis EO147]
gi|167569612|ref|ZP_02362486.1| peptidyl-prolyl cis-trans isomerase domain protein [Burkholderia
oklahomensis C6786]
Length = 259
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 92/282 (32%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I IA L Q LE+ QEL+ + QE K GI +
Sbjct: 25 IAVVNGTPIPKSRADAMIAQLVQQGQQDTPQLEQAVRQELVNREILMQEAIKRGI-PNRP 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V V ++ L +++ DF+ K +
Sbjct: 84 DVKAQIV---------VAQQTAVL--------------------RALIE-DFLKKNQPSD 113
Query: 161 MEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A + K+ REY + +L DN+ Q + + K A+ L
Sbjct: 114 AELKARYDDLVKSAAGREYHLHHILV---DNEQQAKDLIAKIKGGAK---------FEDL 161
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAICDK 275
K SK + G + P+F ++ Q T P TQ G I + D
Sbjct: 162 AKQYSKDPGSAKNGGDLDWSDPKAYVPEFAAAAQQLQKGQMTDAPVKTQFGWHIIRVDDI 221
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + +K ++ Q K++ E LR A +
Sbjct: 222 RSITPPPFEQVKQQIAQQMVQQKLQAFEEG----LRQQAKVQ 259
>gi|16804258|ref|NP_465743.1| hypothetical protein lmo2219 [Listeria monocytogenes EGD-e]
gi|224500981|ref|ZP_03669288.1| hypothetical protein LmonFR_00430 [Listeria monocytogenes FSL
R2-561]
gi|46396978|sp|Q8Y557|PRSA2_LISMO RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|16411689|emb|CAD00297.1| lmo2219 [Listeria monocytogenes EGD-e]
Length = 293
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 105/299 (35%), Gaps = 50/299 (16%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + + T +G+V T ++ +K + + ++++
Sbjct: 1 MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDV-TKDEL---YDAMKDKYGSEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + FS+ L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VSDEDVDKKFNEYKSQYG---DQFSAVLTQSGLTEKSFK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L +V+ + +K + + + +NK +
Sbjct: 104 SQLKYNL----LVQKATEANTDTSD----KTLKKYYETWQPDITVSHI-LVADENKAKE- 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-- 253
V++++KD E+ L K S D + L + +K+
Sbjct: 154 --VEQKLKDGEK--------FADLAKEYST--DTATKDNGGQLAPFGPGKMDPAFEKAAY 201
Query: 254 ----QNNTTNPYVTQKGVEYIAI----CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAE 303
+ + + P TQ G I + + A+KA YL +Q T ++K +
Sbjct: 202 ALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKK 260
>gi|315586175|gb|ADU40556.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A]
Length = 299
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 96/283 (33%), Gaps = 35/283 (12%)
Query: 39 SSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
S+ + T++G +IT D I +R K+ + ++ +++ I L + E + +
Sbjct: 41 SAGVLATVDGRLITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKTEKL 100
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+F + + K+ ++ + ++
Sbjct: 101 D-------------------QTPEFKAMM-------EAVKKQALVEFWAKKQAEEVKKIQ 134
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
EM+ N K + +E R +L D + + K+ K +E++ +
Sbjct: 135 IPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELAN 194
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ ++ + + G ++ + P F + + + T P T+ G I +
Sbjct: 195 RDTIDPNSKNAQN--GGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLI 252
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
K K + ++ + +++LR +A I
Sbjct: 253 SKDSPVTYTYDQAKPTIKGMLQEKLFQERMNQKIEELRKHAKI 295
>gi|171463167|ref|YP_001797280.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171192705|gb|ACB43666.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 270
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 47/307 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISK--RIALLKLQKING 70
++ + + IF + + I ++NG +IT+ + + + AL + QK +
Sbjct: 1 MMVRFIAVGIFAGASLGHTWAQQSGLPINAAASVNGVIITNDMVEQGIKAALSQGQKDSP 60
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
EL K V++ I L Q+ EK G+ ++
Sbjct: 61 ELRKAVVEKFIKVLLLSQQAEKDGLANS--------------------------ERANTQ 94
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+Q + + + + EY + +
Sbjct: 95 LAMIRQNYLADLEMSTYMSKNPITDADVQAEYNKEIASLSPQGMIVEYKVSDI------- 147
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNL 249
+ A +R++ + +K+ K S + V G ++ + PQ +
Sbjct: 148 -----AVATEADAQAALARIKKGEAFDKVAKSVSLAPNKVQGGAVGWIQPGQVAPQLAST 202
Query: 250 LKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
L S+ + P Q+G I + DK+ ++ ++ + E++ +
Sbjct: 203 LTTLSKGQVSPAPIQMQQGWYLIKLEDKK--SSKLPSFEQAKQAIRTGLTQRKQFEFLGQ 260
Query: 308 LRSNAII 314
+ +A I
Sbjct: 261 IAKDAKI 267
>gi|153872856|ref|ZP_02001627.1| peptidyl-prolyl cis-trans isomerase D [Beggiatoa sp. PS]
gi|152070679|gb|EDN68374.1| peptidyl-prolyl cis-trans isomerase D [Beggiatoa sp. PS]
Length = 576
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 86/270 (31%), Gaps = 37/270 (13%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+TD D +R + ++ ++ LI+ + + +T + ++ +H
Sbjct: 94 VTDYDEQQRTRF--------DEQQRSISYLIIPKTRFDKA----VTITDADIEKYYQEHL 141
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLA-IQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
+ E K + ++ D+ + + + E +K
Sbjct: 142 ERYK-TVE----------------KVRIEYVELSKSDLANAEPLSEEMLKERYQE---RK 181
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
T + R +L + + K+ ++++ + KL K S
Sbjct: 182 ASFTTPGRWNARHILIEVGKEASVSDKEEAKQKVQDILAKIKAGESVEKLAKQFSDDIGS 241
Query: 230 S--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
G + + F+ LK + + + P T+ G I + D + + +
Sbjct: 242 KNQGGDLGWFDSGTMVKPFEEALKSMKVGDISEPIKTRFGFHIIELVDVQPEKV-LPFEQ 300
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K E+ ++ + ++ A + +
Sbjct: 301 VREQLEADLKNEQADSAFYGQVEQMANLAF 330
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 4/111 (3%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVN---YFFVQHARNTGLSAEDFSSFLDKQGI 129
+Q++I E L Q +G+ + F + S + L QG+
Sbjct: 7 RHRVLQDMIEEELLVQSAINNGLRISDAFLATRIQSFQAFQDDGKFSPSQYEQVLRYQGM 66
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
F+ + + D ++ + + + + + YLI
Sbjct: 67 TPTAFEWEIRRSLL-TDQIREGVLRSALVTDYDEQQRTRFDEQQRSISYLI 116
>gi|229073881|ref|ZP_04206965.1| Foldase protein prsA 1 [Bacillus cereus F65185]
gi|228709250|gb|EEL61340.1| Foldase protein prsA 1 [Bacillus cereus F65185]
Length = 286
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 90/257 (35%), Gaps = 30/257 (11%)
Query: 63 LKLQKINGELEKIAVQELIVE-TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L ++ N EL++ A + ++ + L+K ++K + + + G + F
Sbjct: 43 LTKEEFNKELKEKAGESVLQQVMLEKILLDKY--KVSDDETKKKVDELKKEMG---DSFK 97
Query: 122 SFLDKQGIG-DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
S+L ++ + ++ K L Q + +K E EI K+ +
Sbjct: 98 SYLTQKNVRNEDELKDKLKTQMAFEKAIKA------SITEKEI-------KDYYKPILKV 144
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L ++ ++ + E SK +G+
Sbjct: 145 SHILVK-------DEKMAKEIKEKINNGEDFTTLAKEHSEDPGSKEKGGELGELNAFQMD 197
Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI-- 297
+ P+F+ K + P + G I + +K++L K ++ + ++
Sbjct: 198 RMDPKFKEATYKLEAGQVSEPIKSSFGYHIIKMTEKKELKTFNQEKENINKELEAKRLTD 257
Query: 298 EKHEAEYVKKLRSNAII 314
++ + ++ K L A I
Sbjct: 258 QQWQQKFFKDLFKQADI 274
>gi|24373364|ref|NP_717407.1| peptidyl-prolyl cis-trans isomerase D [Shewanella oneidensis MR-1]
gi|24347627|gb|AAN54851.1|AE015624_4 peptidyl-prolyl cis-trans isomerase D [Shewanella oneidensis MR-1]
Length = 621
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 51/169 (30%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + S +NG+ IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSTSEVPAAEVNGDKITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + + +++ ++ L+ + L Q G+ +
Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIE 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ E + + L + G F+ + + +
Sbjct: 120 AIKSEPAFQTDGKFDNERYQAILRQLGYQPQTFRSMMRVDMTRRQLTAA 168
>gi|282856786|ref|ZP_06266047.1| hypothetical protein HMPREF7215_0584 [Pyramidobacter piscolens
W5455]
gi|282585409|gb|EFB90716.1| hypothetical protein HMPREF7215_0584 [Pyramidobacter piscolens
W5455]
Length = 368
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/334 (12%), Positives = 107/334 (32%), Gaps = 36/334 (10%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-------IRTTINGEVITDGDI 56
++ T+L IK + F++I V + + S + +NGE + +
Sbjct: 2 QILTALRTQIKWILALFIVIFTASVGFMYGTGGSSDSDNQRTGDFVVAKVNGEELRISQL 61
Query: 57 SK-------RIALLKLQKINGELE-KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ R + L L K E++ E+ + I+ ++ V+ +
Sbjct: 62 QEHLRSFVERNGIRDLSDKQMPLIYKAVFDEMVSNRAVIDEVARLKISAPADDVDRQLKE 121
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPA 165
N ++ E F L QG K +A Q + V ++ ++ A
Sbjct: 122 V-ENQYVTKEAFMQTLKNQGSSLEQVKAEIARQLAINKMLEDVSGGVVVSDDEIKTLYDA 180
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ E F +K F ++ D + + + ++ ++
Sbjct: 181 LRGNFTLPAGIEAD-----FVQLKSKEAADKFAEEVKADKDWDKALTIVSADVVQATSND 235
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+H+ + ++ + + + + + P +Y + + + ++
Sbjct: 236 VHE-------RIAAMEMVGKLEPISALNDGEISAPIEITSQ-DYFVVHRIKAVSEDVRPL 287
Query: 286 AY----LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +K + + Y+K L +
Sbjct: 288 SEVSDGIKTMLLQSKKVEAQRNYIKGLTDKMNVE 321
>gi|254428426|ref|ZP_05042133.1| PPIC-type PPIASE domain protein [Alcanivorax sp. DG881]
gi|196194595|gb|EDX89554.1| PPIC-type PPIASE domain protein [Alcanivorax sp. DG881]
Length = 632
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/219 (11%), Positives = 69/219 (31%), Gaps = 22/219 (10%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ + V F+ ++ + E+F + + + + +++ + VK +
Sbjct: 189 RKQFSVSDEEVKAFYDENQGEF-MRPEEFK--VSYVELSADKYADQVSVT---DEDVKAE 242
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ ++ +E + + + +L + D++ Q V+ R +
Sbjct: 243 YDVRKSIMEEAGAGDAPR---------QVSHILIEVNDDRDLEQAKVRAREA---AKAIA 290
Query: 212 LPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVE 268
+ S S G + + L + ++ + + + P VT GV
Sbjct: 291 GGESFADAAAQYSDDSGSAQSGGDLGVVSKGALPEEMEDAIADLASGTVSAPVVTDAGVH 350
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
I + + + A LS Q + +
Sbjct: 351 LIKVTQEETARA-LPSLAELSDQIRADLKKARAEALLND 388
Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 16/175 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELE- 73
+++ F I Y + + + G IT +++R+ +L+ Q N
Sbjct: 7 AAIILPFVISGFYGYFVGGSTGDVVAEVEGSKITRSVVNQRVERVRNMLREQSPNMNPAL 66
Query: 74 -------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSF 123
++ + ++ E L E+S + F V + + S + F
Sbjct: 67 LDSFVRPEMVLDGIVNEQLILAAAEQSSMVFSEQQVAADIYKVPLFQEDGKFSEQRFERE 126
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L +G+ + Q L I + FM +L E+ ++ + Y
Sbjct: 127 LRARGMNPQSYIQGLRQDMIKEQF-RAGFMQTDFSLPSELNEQRRLGEQSRDIRY 180
>gi|329767659|ref|ZP_08259179.1| hypothetical protein HMPREF0428_00876 [Gemella haemolysans M341]
gi|328839086|gb|EGF88672.1| hypothetical protein HMPREF0428_00876 [Gemella haemolysans M341]
Length = 312
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 91/238 (38%), Gaps = 27/238 (11%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+T+ DI + I +L K A +I + L ++K D T++ + A
Sbjct: 38 VTEKDIVESIGASQLSKT-------ATSMMIQKVL----LDKYKNKIDQKTIDEQLQK-A 85
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ + F L +QG + +K L +++ ++ + L+ NK
Sbjct: 86 QEQYGGKDKFEQLLKQQGFTLDKYKDGLKVKAAQTLLINDYAGTNDDKLKESYEKNK--- 142
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFAS--KI 226
+Y + +L S+ N ++ K AEE +L+ D L K S
Sbjct: 143 -----HQYHLAHILVSVKSESNPNGLSDEEAKKKAEEVLKKLKDGGDFATLAKENSNDTA 197
Query: 227 HDVSIGKAQYLLESD--LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ + G + + D +F++ S++ T++ T G I + D++D +
Sbjct: 198 NASNGGDLGWSSKEDNSFVKEFKDAAYALSKDKTSDVVKTSFGYHIIKVLDEKDSSFD 255
>gi|206562085|ref|YP_002232848.1| putative peptidylprolyl isomerase [Burkholderia cenocepacia J2315]
gi|198038125|emb|CAR54073.1| putative peptidylprolyl isomerase [Burkholderia cenocepacia J2315]
Length = 280
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 88/309 (28%), Gaps = 41/309 (13%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIALLKLQKI 68
I +++T L C P+ + + +N I D+ I Q +
Sbjct: 6 ISIVSTLIALACACGAPVARAAGTKTDTPLPPGVEAVVNDTPIARSDVDSMIEATG-QTV 64
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
EL A +ELI + L +Q EK+ VN ++ + +L
Sbjct: 65 TPELRAQAKRELIAQHLVEQAAEKANYG-SRPEVNRVVMR-----ARTVAATDLYL---- 114
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ + Q++ VK + + N EY + + P
Sbjct: 115 ------RDNVHPQAVTDAQVKARY--------------DDIVANAAQFEYRADVIAVADP 154
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+++ ++ + ++ V+ GK L P Q
Sbjct: 155 AEVNALVAELKQGAAFDAVAKKYNTTPNGGVAQWVELRTPVAEGKTGGLPL----PLAQA 210
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVK 306
+ P + + +KR A K L Q ++ V
Sbjct: 211 ITSLQPGAVAGPIRVGNAFAIVKLDEKRATVVPTFEAAKNVLRQQLEGQAQQRAMTALVD 270
Query: 307 KLRSNAIIH 315
KL A I
Sbjct: 271 KLAGQATIQ 279
>gi|119476198|ref|ZP_01616550.1| peptidyl-prolyl cis-trans isomerase D, putative [marine gamma
proteobacterium HTCC2143]
gi|119450825|gb|EAW32059.1| peptidyl-prolyl cis-trans isomerase D, putative [marine gamma
proteobacterium HTCC2143]
Length = 640
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/391 (12%), Positives = 109/391 (27%), Gaps = 93/391 (23%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISK-----RIALLKLQK 67
L+ + + +I + S + +NG+ I+ ++ + R LL
Sbjct: 26 LIAKFIIGLIILTFALFGIDSLVGNNGPAVVAAVNGDEISLAELEQGVSLERRRLLNYMG 85
Query: 68 INGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLS 116
N + L + LI + L Q + + ++ Q + S
Sbjct: 86 ENADPSLLDDQRLRGPVLDRLIQQKLLLQAAADASVGVSDAALDQTIIAMEQFQEDGKFS 145
Query: 117 AEDFSSFLDKQGIGDNHFKQ---------YLAIQSIWPDVV------------------- 148
E + S L G +KQ L D V
Sbjct: 146 PERYQSILRGSGYSTAFYKQLMSQDLTVAQLNSGISGSDFVISNELSEVSKIVGQQRSFR 205
Query: 149 -----KNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLF-------SIPDNKLQN 194
+ + E EI N K + + ++ V + + ++
Sbjct: 206 YFILPREKVAAQVIISEEEIQQHYNDNIDKYQSEEQVMLEYVEVKTADFFKPVEADDIER 265
Query: 195 QGFVQKRIKDAEESR--------LRLPKDCNKLEKFASKIHDVSIGKAQYLLES------ 240
+ ++ +A+E R + +D ++ + A ++ + G + +
Sbjct: 266 EYALEIAAFEADEERRVSHILIEITDDRDASEARQLAEQLAEKLTGDTDFATIAREFSED 325
Query: 241 ----------------DLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
P+F L + + + + P T G + + R +
Sbjct: 326 PGSSSDAGDLGFTMGDTFPPEFEAALFELALDQISEPIQTDAGYHLLKATEIRGVSPAPF 385
Query: 284 LKA--YLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + + E V+ LR A
Sbjct: 386 SERGSVIEGRLQQAAAEAEFVNAVEDLRDLA 416
>gi|134293907|ref|YP_001117643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
gi|134137064|gb|ABO58178.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
Length = 321
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 12/190 (6%)
Query: 137 YLAIQSIWPDVVKNDFMLKYG--------NLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
AI+ D+V ++ + E++ + + T R + + ++P
Sbjct: 119 QAAIEQARRDIVARSYLASVSAPPADYPSDAEIQSAYEQNRAALTTPRALHVAQIYIAVP 178
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQ 247
N ++ +R R + + G ++ +S + P +
Sbjct: 179 SNADAATLEAARKRAADLANRARSGDFAALARANSQDAASAANGGDLGFVPDSLMLPAVR 238
Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEY 304
+ P T G + + D R K L +++++ Y
Sbjct: 239 QAADALKPGQVSAPVRTPSGFHVVKLIDVRAAAPRPLADVKEQLRTMLRAQRMQQNARTY 298
Query: 305 VKKLRSNAII 314
+ L +NA I
Sbjct: 299 LANLAANAPI 308
>gi|84500721|ref|ZP_00998970.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597]
gi|84391674|gb|EAQ04006.1| PPIC-type PPIASE domain protein [Oceanicola batsensis HTCC2597]
Length = 282
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 52/307 (16%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGE 71
+L+ V + V + + + T++G IT G + LL+ L + G+
Sbjct: 4 RLIQAAAVSFTLAMAAPVQAQDETTADTVVATVDGTEITLG----HMILLRQSLPQQYGQ 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFD-SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L + + I++ L +Q D ++ ++A+ L G+
Sbjct: 60 LPDEVLFQGILDQLVQQTALSKSYEGDTPRSIRLALEN-EERGLIAAKAVRDVL-SDGVT 117
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
D +Q + YGN E E EY +L
Sbjct: 118 DEAIQQ--------------AYDDTYGNAEPE-------------TEYKAAHILV----- 145
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN- 248
+ + + +++ D +L + S + G+ + + + F+
Sbjct: 146 --ETEEEARAIVEELN-----GGGDFAELAQEKSTGPSAPNGGELGWFGKGMMVAPFEEA 198
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++ + P TQ G I + + R + + + ++ ++ L
Sbjct: 199 VVGMEPGAVSEPVQTQFGWHVIQLQETR--TKDAPALEDVRDELRGQVEQQLVKAHIDAL 256
Query: 309 RSNAIIH 315
NA +
Sbjct: 257 VENANVD 263
>gi|172056725|ref|YP_001813185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium
sibiricum 255-15]
gi|259534741|sp|B1YK87|PRSA_EXIS2 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|171989246|gb|ACB60168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Exiguobacterium
sibiricum 255-15]
Length = 304
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 90/286 (31%), Gaps = 37/286 (12%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-KIAVQE 79
+L + + + + + + G + D+ QK ++ + + +
Sbjct: 5 LLSVAAVASVFTLAACGSNDEAVINYKGGEVNKADVQDEA----YQKAGAQIAFQQTMNK 60
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL 138
L+ ++ G V + E F++ L GI + F++ L
Sbjct: 61 LLE--------KEYGKKVTDKEVEAEVKKTKDQFP-DKEQFNTTLQTAGIKNEKEFEKVL 111
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q + + + +E K E +L + + + +
Sbjct: 112 RTQMLLKEAKSAKSKVTDKEIEDRFNQEK--------VEVKASHILV---EKESEAKAIK 160
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNN 256
++ + + +++ K + G Y + + +F+N +
Sbjct: 161 KQLDEGGDFAKIAKAKSTDTG-------SATKGGDLGYFTKGKMVEEFENYAFKDGVEGK 213
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
++P TQ G I + D+++ + L+ S + E+ A
Sbjct: 214 ISDPIKTQFGYHIIKVTDRKEKK-DFTLEKE-SDRIKKALAEEKSA 257
>gi|288941065|ref|YP_003443305.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium
vinosum DSM 180]
gi|288896437|gb|ADC62273.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Allochromatium
vinosum DSM 180]
Length = 282
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 79/283 (27%), Gaps = 56/283 (19%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE----TLKKQEIEKSGI 95
+ T+NG D+ + + +LQ + Q+L E + QE ++ +
Sbjct: 31 ETLIATVNGTPY-RLDVFRVFFMERLQGRPASNDPAVQQQLFDEFMNLIVASQEGDRRKL 89
Query: 96 TFDSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
V +S S+ D+ + K
Sbjct: 90 E-GERNVVAALE--LERMKVMSNAALSAMADEIEPSEKELKD------------------ 128
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
A + + T EY R +L + + + ++
Sbjct: 129 ----------AYDRIKEQATRTEYKARHILLK------SEDEAKKLIKQLDKGAKFE--- 169
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN-PYVTQKGVEYIAI 272
+K + G + + + P + + K + T P TQ G I +
Sbjct: 170 --ELAKKHSEGPTGKDGGDLGWFDPAQMVAPFAEAVTKLEPGSYTKEPVQTQFGWHIIEL 227
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ R + P + + ++R+NA++
Sbjct: 228 QETRK------AEPPAFEDAKPQLTALVRRQKLAEMRNNAMVE 264
>gi|188580734|ref|YP_001924179.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
populi BJ001]
gi|179344232|gb|ACB79644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
populi BJ001]
Length = 300
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 87/282 (30%), Gaps = 50/282 (17%)
Query: 40 SRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ +NG+ IT D++ + AL G + + V +I + Q E
Sbjct: 47 ETVVARVNGQAITAADLALAGEDPALSLPGVDEGAKQNLLVDYMIDLKVGAQAAE----- 101
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
A G S E F L F+ L + K +
Sbjct: 102 -------------AAKVGDSPE-FKRKLAY-------FRDKLLLDDYLEREAKKAVTPEA 140
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E K + E R +L +++ +K +R++ +D
Sbjct: 141 AKALYEQTVKSMKPEE----EVHARHILV-------ESEDEAKKI-----AARIKGGEDF 184
Query: 217 NKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273
K+ SK G + + + F + K + ++P TQ G + +
Sbjct: 185 AKIAAEVSKDPGSKTEGGDLGWFTQERMVKPFADAAFKMTPGQVSDPVKTQFGWHVLRVE 244
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+KR + + Q K + + + KLR A +
Sbjct: 245 EKRTKP--VPTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284
>gi|157828738|ref|YP_001494980.1| protein export protein prsA precursor [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801219|gb|ABV76472.1| protein export protein prsA precursor [Rickettsia rickettsii str.
'Sheila Smith']
Length = 282
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 30/295 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S ++A ++ T G + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKASQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYVNNLLLK---EEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + NK + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---SQKEANDIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
K ++L +K S + IG L P+F + N +
Sbjct: 161 LSKGGNFTKLAEELSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVST 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P T G I + +K+ + I K + +Y+ L + A +
Sbjct: 217 PVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKKYIADLEAKANV 269
>gi|320333920|ref|YP_004170631.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
maricopensis DSM 21211]
gi|319755209|gb|ADV66966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
maricopensis DSM 21211]
Length = 639
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/318 (15%), Positives = 97/318 (30%), Gaps = 36/318 (11%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KR----IALLKLQKINGELE 73
+ ++ P++ +NG VITD D+ +R + L + + + +
Sbjct: 26 VLGMVASFTPLLGNLGGQNKGNPAVKVNGTVITDQDLESVRRGNPVLGLTQDGVLGDDFK 85
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDN 132
V+ + ETL KQ VN + GL S +++ L + G D
Sbjct: 86 TAIVESKVQETLLKQGASDQ--QVSRAEVNDAVSKLREQLGLKSNKEWVDRLQQYGFTDA 143
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F++ Q W +K E Y + F +
Sbjct: 144 SFREAQRTQLAWQKKLKALQDATPKGTPAEAQLY-----------YTLHPDEFKSEARIV 192
Query: 193 QNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL- 250
Q + ++ + D KL S ++ G + + P + L
Sbjct: 193 GRQIAVSSEAKAKQLLAQAKGGADFAKLASENSTVNKDRGGALGPIENGEPKPVAKITLP 252
Query: 251 --------KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI----ALKAYLSAQNTPTKIE 298
+Q T+ + + + +R + A+++ T K +
Sbjct: 253 AEVGEAAFALTQGGLTDVVKSGDKFYIVKV--ERFVPASTQPFEAVRSKAIDAVTKQKQD 310
Query: 299 KHEAEYVKKLRSNAIIHY 316
+ LR+ A + +
Sbjct: 311 AAVEAWYTDLRNKANVEF 328
>gi|291297351|ref|YP_003508749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber
DSM 1279]
gi|290472310|gb|ADD29729.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber
DSM 1279]
Length = 620
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 100/311 (32%), Gaps = 16/311 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDI--SKRIALLKLQKINGELE 73
+ + F + ++ + S + T+NG + + D+ +++ + G L+
Sbjct: 14 GVLALAFVVGSVLLFTPQGQRSTQGKTEFTVNGRPVYELDLARAQQSDPILSTNPQGLLK 73
Query: 74 KIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQG 128
+A V +IV T Q+ + + S + GL ED+ FL + G
Sbjct: 74 NLAEVNFVDRMIVTTALLQDTAR--VRVSSGELKKELDTIKERFGLQKKEDYDRFLTQVG 131
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
D+ + L Q V+ + K E E+ + ++ E ++ +
Sbjct: 132 YTDSQLRNELRDQIRINKRVE-EIQKKAEPTEEEMRLYFELNRDQYKNEERVQARQIVVD 190
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
D ++ + + A+ + + E+ + + +
Sbjct: 191 DKTTADKIYAEVTAPGADFAAIAKANSKLNAEQGGALGAQAGQSEPGPVTRVVFPNAVAE 250
Query: 249 -LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYV 305
+ K + P + + G + + K + Y+
Sbjct: 251 AVFKLRDGQISKPIEAGGRFYIVKVEKYLPAGDVKFEEVKDRVKEDAKRIKGQGALEAYI 310
Query: 306 KKLRSNAIIHY 316
++LR+ A + +
Sbjct: 311 EELRAKANVKF 321
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 68/216 (31%), Gaps = 18/216 (8%)
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ L Q +Q ++ ++ + ++ A + K ++ITV
Sbjct: 361 LQQGLGELAVQFFMPQTLEQLISREAAYQFAQTLGQPFFGSKSDVVAQAQQWKTRDITVT 420
Query: 177 EYLIRTVL------FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
E +R F+IP + +K K ++ KLE A ++ +
Sbjct: 421 EAEVRRYYDANLANFTIPASAKVQAVNFKKEDKAKADAFRAAALKGGKLEDLAKA-NNGT 479
Query: 231 IGKAQYLLESDLHPQFQNLL--------KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ + + P L+ K + + G + I + R
Sbjct: 480 VQDYGVVNPGTMPPVPNRLVFLTRGTFPKGPLGEVSEVVKLEDGSFQVLIVNDRKAEVLR 539
Query: 283 AL---KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ Q ++ + ++++++R A +
Sbjct: 540 PFEEVREEARQQVLASRRAEAAQKWLEEVRKAAKVE 575
>gi|150025239|ref|YP_001296065.1| peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium
psychrophilum JIP02/86]
gi|149771780|emb|CAL43254.1| Peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium
psychrophilum JIP02/86]
Length = 459
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/318 (12%), Positives = 98/318 (30%), Gaps = 25/318 (7%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KI 68
+ I ++ + ++ + + + + + + VI D DI K LK Q +
Sbjct: 9 NIISSKLSFIIALLAISLGVSAQEKKQKVDGVIAVVGNYVILDSDIDKTTLELKQQGVNV 68
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDFSSFL 124
+ +L+ + L + I + VN + G S + +
Sbjct: 69 KDVTRCQLLGKLLEDKLYAHHAVQDSIVIEDKEVNSKLDEQVSYMVEQLG-SMDKVIQYF 127
Query: 125 DKQGIGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIP----ANKQKMKNITVRE 177
K + F+ L + ++ + E+ A + + E
Sbjct: 128 KKSN--EQDFRTELFDIIKINKLTAEMQKKVVDAVIITPEEVRNFFKAIPKADLPVFGAE 185
Query: 178 YLIRTVLFSIPDNKLQNQ---GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+ ++ ++ Q ++ K+ +E K E S +
Sbjct: 186 MEVAQIVVKPTVSQEAKQKVIDQLKAIKKEVQEGSSFFGKAVLYSEDKGSSSNGGYYK-M 244
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ +F+++ + + P++T G I + R + L+ + +
Sbjct: 245 DRR--TQFVKEFKDVAFGLKEGEISEPFLTDFGYHIIYLEKIRGQEVD--LRHIVISPKV 300
Query: 294 PTKIEKHEAEYVKKLRSN 311
+ K E ++ +R
Sbjct: 301 SDEALKVSKEKIELIRKR 318
>gi|42527165|ref|NP_972263.1| basic membrane protein, putative [Treponema denticola ATCC 35405]
gi|41817589|gb|AAS12174.1| basic membrane protein, putative [Treponema denticola ATCC 35405]
gi|325474208|gb|EGC77396.1| basic membrane protein [Treponema denticola F0402]
Length = 358
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 80/237 (33%), Gaps = 33/237 (13%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKIN---GELEK 74
+ I +V + S ++ +N E IT G + K + + Q N + +K
Sbjct: 5 IFIAVMLVGFLGLLSAQNDLQVIAQVNLSKKEPITLGQLKKLVKFAESQGGNIATNDDKK 64
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFF--------------VQHA----RNTGLS 116
+ ++ L+ L Q EK I ++ V+ F + A + +S
Sbjct: 65 LVLESLMRTKLLVQAAEKENIKISNSQVDNAFNDVLSQYVKYPITESEFAKLIKQKENIS 124
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK---MKNI 173
++F + G K+ + I + + + + + A + MK
Sbjct: 125 LDEFMK--KQTGCTVEELKKIIKDNLIIQNYIASKHQAEIVKMATPTDAQIRSYYEMKKG 182
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+ + +LF + +++ + K E ++ K+ ++ +
Sbjct: 183 ELVRPDMVKMLFVAVKKEGKDKEEIDKI----NELHKKVKKNIKEIANIKKNAEAGN 235
>gi|82751495|ref|YP_417236.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus RF122]
gi|258423118|ref|ZP_05686012.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus A9635]
gi|283770925|ref|ZP_06343817.1| foldase prsA [Staphylococcus aureus subsp. aureus H19]
gi|123548081|sp|Q2YTZ6|PRSA_STAAB RecName: Full=Foldase protein prsA; Flags: Precursor
gi|82657026|emb|CAI81463.1| probable peptidyl-prolyl cis-isomerase [Staphylococcus aureus
RF122]
gi|257846682|gb|EEV70702.1| peptidyl-prolyl cis-isomerase [Staphylococcus aureus A9635]
gi|283461072|gb|EFC08162.1| foldase prsA [Staphylococcus aureus subsp. aureus H19]
gi|283471112|emb|CAQ50323.1| foldase protein PrsA [Staphylococcus aureus subsp. aureus ST398]
gi|298695109|gb|ADI98331.1| probable peptidyl-prolyl cis-isomerase [Staphylococcus aureus
subsp. aureus ED133]
Length = 320
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 83/237 (35%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K ++ + G I D E K L + K++K+
Sbjct: 217 EKALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNSE---KQSLKEKLVDQKVQKNPK 270
>gi|154250196|ref|YP_001411021.1| hypothetical protein Fnod_1521 [Fervidobacterium nodosum Rt17-B1]
gi|154154132|gb|ABS61364.1| hypothetical protein Fnod_1521 [Fervidobacterium nodosum Rt17-B1]
Length = 328
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/329 (15%), Positives = 110/329 (33%), Gaps = 49/329 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKINGELEKI--- 75
+ +V ++S+ +A I +NG IT + ++ LL++Q N +I
Sbjct: 4 VCIFLVLLISFFVFAQ-QEIVAVVNGRSITMDEWNREANVQKLLLEIQNSNETFYQILMT 62
Query: 76 --------------AVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSA 117
+ LI + Q E + D N V+ + + ++
Sbjct: 63 TQEGLVLIEKYKLKVLDTLIRKIAFIQFAESLKVQPDPQTVKNDVDNEIKKMLVDLKMTE 122
Query: 118 EDFSSFLDKQGIG-DNHFKQYLAIQSIWP---DVVKNDFMLKYGNLEMEIPA--NKQKMK 171
+ +L + G+G F+Q L +Q + V ++ E EI A K K K
Sbjct: 123 TQLNDYLMQLGMGQLEDFRQKLYLQRTYSLSLANVYTYYLKNATVSEEEIKAYYEKNKAK 182
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+Y + ++F D + + R A+ + L + + V+
Sbjct: 183 YTVPTQYDL--LIFKAKDKAMADSI----RQDVAKNISVEEISKKYNLSPHVNGL--VTQ 234
Query: 232 GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLS 289
G + + + + + S+ + I + D + + +K +
Sbjct: 235 GDMEKIPQ----NLWVIITSVSKGTILPAQLINNEYYIIRVRDVKPGSQKSLDEVKEEIK 290
Query: 290 AQNTPTKIEKHEAEYVKKLR---SNAIIH 315
+ TK ++ + + K + I
Sbjct: 291 KELVSTKQKEVKDKVAKDFEDFLKKSKIE 319
>gi|330889992|gb|EGH22653.1| periplasmic folding chaperone [Pseudomonas syringae pv. mori str.
301020]
Length = 427
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 7 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 45
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 46 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 102
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 103 DFAALAKEYSQDPGSSSKGGDLGYAGKGVYDPAFEDTLYALNKDQVSQPVRTDFGWHLIK 162
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 163 LLGVEAPSVPTFASLKDKLTTDLKSQLVEQKFVEVTK 199
>gi|329314517|gb|AEB88930.1| Foldase protein prsA [Staphylococcus aureus subsp. aureus T0131]
Length = 320
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQITNASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K + + G I D E K L + K++K+
Sbjct: 217 EKALFKLKDGEVSEVVKSSFGYHIIKADKPTDFNSE---KQSLKEKLVDQKVQKNPK 270
>gi|322434836|ref|YP_004217048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp.
MP5ACTX9]
gi|321162563|gb|ADW68268.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidobacterium sp.
MP5ACTX9]
Length = 662
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 91/275 (33%), Gaps = 29/275 (10%)
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-----LSAE 118
+L G+ E + +E+ E + Q + G+T N V + ++++
Sbjct: 155 QLNMTRGDFEILVKKEM--EVARLQALITGGVTVSDNAVRDSYRVSGTKVKFDYAVITSD 212
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY---------GNLEMEIPANKQK 169
+ ++ F + Q+ + V L Y G A+ Q
Sbjct: 213 TLRATVNPSDSDLQTF--FKTNQARYATAVPESRKLNYFAFGADQIPGGKPQVTDADLQT 270
Query: 170 MKNITVREYLI------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
N + +Y + R +L ++P K D +++ + L
Sbjct: 271 YYNAHLAQYQVKDQAKVRHILIAVPAGADARTDAAAKAKADDLLKQIKAGGNFADLASKN 330
Query: 224 SKIHD--VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S + G+ +L P+F + T++ T+ G + + ++++
Sbjct: 331 SDDPGSKANGGELGFLSPGQTVPEFDKASFSLKPGQTSDVIKTKFGYHILQVEERQNAHT 390
Query: 281 E--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ +KA ++ K EA Y K L A
Sbjct: 391 KPLNEVKAEITPIVEQQKFGNAEAAYAKSLSDEAR 425
>gi|15606037|ref|NP_213414.1| hypothetical protein aq_592 [Aquifex aeolicus VF5]
gi|2983223|gb|AAC06821.1| hypothetical protein aq_592 [Aquifex aeolicus VF5]
Length = 437
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 84/252 (33%), Gaps = 16/252 (6%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIALLKLQKING 70
++T + +F + + K + T+ E IT ++ K L+ ++
Sbjct: 15 IVTLASLSFLFWMFSVSDVKQMLTGNPCVATVGDECITLREYRFELLKYSNFLQDERTEK 74
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQ 127
++A+ LI + + + ++ G V S E + L++
Sbjct: 75 LARRVALNSLITKEVLYLKAKELGWYVSDEEVVEVIKNDENFKEKGKFSVEKYRETLNRF 134
Query: 128 GIGDNHFKQYLAIQSIWPDVVKN-DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G+ +++ + + V+ + E++I ++ + + YLI+
Sbjct: 135 GLTPAEYEEIVRKSLMAQRVLNFLREGVYVLPDELDIQKRFYSLR-VEGKLYLIKPSDVK 193
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLP-------KDCNKLEKFASKIHDVSIGKAQYLLE 239
+ + + + KD K++++ + SI
Sbjct: 194 VDYEPSEEEIKEYYEKNKEKFKEEEKEVVYVWSLKDKEKVKEYYENLKKGSIPSGYTEFN 253
Query: 240 SDLHPQFQNLLK 251
+L P+ + +K
Sbjct: 254 ENLPPKVKEAVK 265
>gi|313499610|gb|ADR60976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
BIRD-1]
Length = 623
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 57/184 (30%), Gaps = 25/184 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + + QHA+ +S + Y+ ++ K+ F
Sbjct: 203 VKVSDEEIKAHYDQHAKEF-MSPDQVVI-------------DYI-------ELKKSAFFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + E+ A +K + +L + N + R ++ E+ +
Sbjct: 242 QVKVTDEELKAQYEKEIANLAEQRHAAHILIEV--NDKVTDAQAKARAEEIEQRLAKGED 299
Query: 215 DCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
++F+ S G + P F+ L + Q + P T+ G I +
Sbjct: 300 FAALAKEFSQDPGSANSGGDLGFAGPGVYDPAFEEALYQLQNGQVSAPVRTEFGYHLIKL 359
Query: 273 CDKR 276
+
Sbjct: 360 LGVQ 363
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60
Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q E + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + SA+ F + + G G F++ L + + + + + ++
Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFREMLGEEMLIGQL-RTGLAGSSFVTDQQVD 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|325288391|ref|YP_004264572.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobotulus
glycolicus DSM 8271]
gi|324963792|gb|ADY54571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobotulus
glycolicus DSM 8271]
Length = 311
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 94/293 (32%), Gaps = 39/293 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--------------ELEKIAVQELIVETLKKQ 88
+N E+I D ++ +K + ++ + I + + +Q
Sbjct: 30 VAKVNDELIAKKDFDNKLNDIKTYVQSQGVDFTTEEGKAYLQNIQGQLLSMSIQDAIIRQ 89
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E++K+ + + Q ++ G D +++L +QG+ + K A
Sbjct: 90 EVKKNNWDTNIPQITEKVNQISQKNG---GDLATYLKQQGLTEEDLKNTFAFAYYTGKDA 146
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
E +M+ + R +L D + +++ A+ +
Sbjct: 147 TVSEEETRQYFEDHFDQYGGQME-----QVKARHILVGTEDEA---KDIIRQIQAGADFA 198
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKG 266
L K + + + G+ Y + +F+ T P T+ G
Sbjct: 199 ALAKEKSTDGSKD--------NGGEIDYFTRGKMVEEFEKAAFDMKIGELTTTPVKTKYG 250
Query: 267 VEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + D + E + + + +K E+ Y+K L A I Y
Sbjct: 251 YHVIQVLDHKQTVKPDYEKVKEKVQADALENAQNQKAESYYMK-LAQEAKIEY 302
>gi|163856532|ref|YP_001630830.1| peptidyl-prolyl cis-trans isomerase D [Bordetella petrii DSM 12804]
gi|163260260|emb|CAP42562.1| peptidyl-prolyl cis-trans isomerase D [Bordetella petrii]
Length = 653
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 75/215 (34%), Gaps = 21/215 (9%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIA 61
++ + +++ + ++ F +V I Y+S+ T+ G+ IT + D++ R
Sbjct: 3 ELLRNHRRWMQFILLILIVPSFFLVGIQGYESFIRREPELATVAGQPITRSEFDMAHRNQ 62
Query: 62 LLKLQKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
L + ++ G + + + +LI + L Q + + T+
Sbjct: 63 LEQFRQRLGSQFDPALVDTPAMREQLLNQLIDQRLLAQVAIDNRFSVSDGTLRNTIAAIP 122
Query: 111 R---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ N S E + L QG+ F+ L D+ + A
Sbjct: 123 QVQDNGRFSPERYRQVLAAQGMTPTSFEAGLR-----RDLAVGRVLEPINQSAGAPDAVV 177
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+++ ++ ++ F+ D + Q +
Sbjct: 178 ASLESALTQQRTVQLRRFAAADYRAQVSVSPEDIQ 212
>gi|269837477|ref|YP_003319705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphaerobacter
thermophilus DSM 20745]
gi|269786740|gb|ACZ38883.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphaerobacter
thermophilus DSM 20745]
Length = 473
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 61/201 (30%), Gaps = 21/201 (10%)
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
LS + + +K+ + ++ + ++ ++ Q+
Sbjct: 238 LSPDQVQATATA---TFQQYKRNVLDEAGMSEEDFRRLVVLPEAARQKVVYALQEKIPTR 294
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+ +L + D + +++ AE ++ E+ A V+ G
Sbjct: 295 AEQVHAAHILVATEDAAKAIEEQLRQGADFAELAK----------EQSADSATAVNGGDL 344
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ + F+ + + P TQ G I + +K + +
Sbjct: 345 GWFPRGLMVEPFEEVAFSLEPGEISAPVQTQFGWHIITVFEKE---ADRPVDVETLQTLR 401
Query: 294 PTKIEKHEAEYVKKLRSNAII 314
+ +++++ R+ I
Sbjct: 402 NQQFS----KWLEEQRAAVTI 418
>gi|46579478|ref|YP_010286.1| peptidyl-prolyl cis-trans isomerse domain-containing protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|120602972|ref|YP_967372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris DP4]
gi|46448892|gb|AAS95545.1| peptidyl-prolyl cis-trans isomerse domain protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563201|gb|ABM28945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris DP4]
gi|311233293|gb|ADP86147.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris RCH1]
Length = 629
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 17/165 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---------RIALLKLQ 66
+ F LII V + + T+N + I D + R +
Sbjct: 14 VKVAFGLIIVVFVFWGVGSMQEGPTSVVATVNKKPIVIRDFIREYERQVESLRTRFPGVT 73
Query: 67 K---INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNTGLSAED 119
L++ +Q+++ ETL +QE E+ GIT + Q + E
Sbjct: 74 ADELKKLGLKRQVLQQMVAETLMQQEAERLGITVTPYELRAAIDQIPAFRDASGKFDPET 133
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ L Q F++ + + ++ + E
Sbjct: 134 YKKVLKAQQTVPGRFEEGVRKDML-GRKMRALVTAGAVVTDAEAR 177
Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 2/94 (2%)
Query: 180 IRTVLFSIPDNKL-QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
R +L +P+ ++RI DA K + + G+ +
Sbjct: 270 ARHILVRVPEGADEATVRKAEERIADAAAQIKAGKDFAAVAAKVSEDGSARNGGELGWFG 329
Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
++ F++ + P +Q G I
Sbjct: 330 RGEMVKPFEDAAFGLKPGEVSAPVRSQFGFHLIK 363
>gi|34498387|ref|NP_902602.1| signal peptide protein [Chromobacterium violaceum ATCC 12472]
gi|34104241|gb|AAQ60600.1| probable signal peptide protein [Chromobacterium violaceum ATCC
12472]
Length = 262
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 90/301 (29%), Gaps = 48/301 (15%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL-----KLQKINGELEKIA 76
L + + + S +++ +NG I ++ + + + + EL +
Sbjct: 3 LSRIAALTLAASISLPVAAESIAVVNGVSIDKSELDAAVTNVVQSSGGKMQDSPELREQL 62
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
LI L QE + G+ A+ + +
Sbjct: 63 KNSLIGRQLILQESTRRGLDKQPA--------FAKRM-------------DEVRAELLRD 101
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
L G+ +++ ++ + +E + + +
Sbjct: 102 ALFADIA--------EKANVGDAQIKARYDEMAAQVAGSKEVHAYQITLGSEADAQKVIA 153
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256
++K K E + R K S G + S + P+ LK
Sbjct: 154 QLKKGAKFDELVKTRSIDPNAKQ----------SGGDMNWGNLSRMEPKLAEALKAIPKG 203
Query: 257 --TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ PY +Q G + D R+ ++ + Q E+ A+ V+ LR+ + I
Sbjct: 204 QVSSAPYQSQLGWHVFKVADIRN--AQVPPLDAVKPQIARQLQEEAIAKAVEDLRAKSKI 261
Query: 315 H 315
Sbjct: 262 Q 262
>gi|226327126|ref|ZP_03802644.1| hypothetical protein PROPEN_00991 [Proteus penneri ATCC 35198]
gi|225204344|gb|EEG86698.1| hypothetical protein PROPEN_00991 [Proteus penneri ATCC 35198]
Length = 135
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN- 248
+ Q +Q+ D ++ + + G+ + + P F++
Sbjct: 2 SDEQAYAKLQQISADIRSGKITFADAAREYSEDPGSAL--RGGELGWSMPDVYDPAFRDA 59
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVKK 307
L++ ++N + P + G I + D R + A + + K + ++++
Sbjct: 60 LMRLNKNELSQPVRSNFGWHLIELEDTRSVDKTDAANKEQAYRLLFNRKFNEEVQNWMQE 119
Query: 308 LRSNA 312
LR A
Sbjct: 120 LRVGA 124
>gi|282882421|ref|ZP_06291048.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B]
gi|281297741|gb|EFA90210.1| foldase protein PrsA [Peptoniphilus lacrimalis 315-B]
Length = 249
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 90/283 (31%), Gaps = 47/283 (16%)
Query: 41 RIRTTINGEVITDGD----ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+I +NG+ IT D I+ L+ +N + K ++ELI L Q+ ++G
Sbjct: 5 KILAEVNGKKITGEDYNIFINSINPKLREHLVNSDQNKEVIEELIHHELIYQDAIENG-- 62
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
E+F LD+ K+ L + + +
Sbjct: 63 -KDKE----------------EEFQKVLDQA-------KKSLLLNYTLGKL-----LSNI 93
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E EI K ++ +R + D K + + A+ S+
Sbjct: 94 EVTEKEIEDFYNNHKEHFTKDQTVRASHILVDDLKKAEE-IYNRIKDGADFSKEAKNNST 152
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
++ + G + + +F++ + P TQ G I + +K
Sbjct: 153 CPSKE--------NGGDLGIFSKGQMVKEFEDACFNMEVGEVSKPVKTQFGYHIIKLVEK 204
Query: 276 RDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ ++ K ++ + + LR + I Y
Sbjct: 205 NKAQEMTLEESRDHIIEDIRRQKEQEIYKDKISSLREKSQIKY 247
>gi|325274293|ref|ZP_08140404.1| periplasmic folding chaperone [Pseudomonas sp. TJI-51]
gi|324100576|gb|EGB98311.1| periplasmic folding chaperone [Pseudomonas sp. TJI-51]
Length = 623
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 29/223 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V + QHA+ +S + Y+ ++ K+ +
Sbjct: 203 VKVSDAEVKAHYDQHAKEF-MSPDQVVI-------------DYI-------ELKKSAYFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + E+ A +K + +L + N + + R ++ E+ RL +
Sbjct: 242 QVKVTDEELKAQYEKEIANLAEQRHAAHILIEV--NDKVSDAQAKARAEEIEQ-RLAKGE 298
Query: 215 DCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271
+ L K S+ + G + P F+ L K Q + P TQ G I
Sbjct: 299 NFATLAKEFSQDPGSAGNGGDLGFAGPGVYDPAFEEALYKLQDGQVSAPVRTQFGYHLIK 358
Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + ++ +LK L+ +E+ + K+L+ A
Sbjct: 359 LLGVQAPEVPSFASLKDKLTRDLKTPLVEQRYVDASKQLQDAA 401
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+
Sbjct: 1 MLQNIRDNSQGWIAKSIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60
Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q E + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDEKLLREEALKGLISRKLLLQGAEDAKFAFSDAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + SA+ F + + G G F+ LA + + + + + ++
Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFRDMLAEEMLIGQL-RTGLAGSSFVTDQQVD 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|323488673|ref|ZP_08093915.1| SurA domain-containing protein [Planococcus donghaensis MPA1U2]
gi|323397691|gb|EGA90495.1| SurA domain-containing protein [Planococcus donghaensis MPA1U2]
Length = 253
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 22/188 (11%)
Query: 41 RIRTTINGEVIT--------DGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQE 89
+ +NGE IT G + +L +L++ L+ + L QE
Sbjct: 61 EVVAEVNGEEITKEDFESIYTGQFEQMAMQSQLSGQEVDQSQLKEQVADSLVAQELLVQE 120
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
EK +T N + A+ GL+ +++ + L +QGI + + + Q ++
Sbjct: 121 TEKQKLTASEEQTNTALEELAQQNGLTSSDELLAALKEQGISEEEVMKQIETQVKIEQLI 180
Query: 149 KNDFML--------KYGNLEMEIPANKQKMKNITVREYLIRTV--LFSIPDNKLQNQGFV 198
+ + E + + + I E + + + Q +
Sbjct: 181 AAETGEIKLTDEELQTYYDEAKAQQEEAGGEEIPAFEDVKPQIEEQLKVQKESEATQALI 240
Query: 199 QKRIKDAE 206
K + AE
Sbjct: 241 AKLREQAE 248
>gi|241889428|ref|ZP_04776729.1| peptidylprolyl isomerase PrsA1 [Gemella haemolysans ATCC 10379]
gi|241863971|gb|EER68352.1| peptidylprolyl isomerase PrsA1 [Gemella haemolysans ATCC 10379]
Length = 312
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 91/238 (38%), Gaps = 27/238 (11%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
+T+ DI + I +L K A +I + L ++K D +++ + A
Sbjct: 38 VTEKDIVESIGASQLSKT-------ATSMMIQKVL----LDKYKNKIDQKSIDEQLQK-A 85
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ + F L +QG + +K L +++ ++ + L+ NK
Sbjct: 86 QEQYGGKDKFEQLLKQQGFTLDKYKDGLKVKAAQTLLINDYAGTNDEKLKESYEKNK--- 142
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFAS--KI 226
+Y + +L S+ N ++ K AE+ +L+ D L K S
Sbjct: 143 -----HQYHLAHILISVKSESNPNGLSDEEAKKKAEDVLKKLKDGGDFATLAKENSNDTA 197
Query: 227 HDVSIGKAQYLLESD--LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ + G + + D +F++ S++ T++ T G I + D++D +
Sbjct: 198 NASNGGDLGWSSKEDNSFVKEFKDAAYALSKDKTSDVVKTSFGYHIIKVLDEKDSSFD 255
>gi|218234193|ref|YP_002367583.1| peptidylprolyl isomerase [Bacillus cereus B4264]
gi|218162150|gb|ACK62142.1| foldase protein PrsA [Bacillus cereus B4264]
Length = 280
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 108/304 (35%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKLVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G ++F+++++ G+ ++ K
Sbjct: 59 VEKVLHDKYK----------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K E +I K+ + + +L
Sbjct: 106 EKLKLTFAFEKAIKA------TVTEKDI-------KDHYKPKLQVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G+ + +F++ K
Sbjct: 145 EKTAKEIKE----KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + DK++L K + + +I+ + + ++L
Sbjct: 201 EVGQLSEPVKSSFGYHIIKLMDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRELLK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|261822503|ref|YP_003260609.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Pectobacterium
wasabiae WPP163]
gi|261606516|gb|ACX89002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pectobacterium
wasabiae WPP163]
Length = 627
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/322 (12%), Positives = 107/322 (33%), Gaps = 34/322 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ ++ + + ++ F + + Y +NG+ IT G + + +
Sbjct: 1 MMDNLRTAANNVVLKIILALIIASFVLTGVGDYLIGGSGDY-AAKVNGQEITRGQLEQAV 59
Query: 61 ALLKLQKING----------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ ++ +L K A+ +LI ETL Q K G+ +
Sbjct: 60 QNERSRQQEALGENFSILASNDGYMQQLRKQALSQLIDETLLDQYANKLGLNISDEQIRQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
N E + + + G+ + + Q L Q +++ +GN
Sbjct: 120 AIFDVPAFQTNKHFDNEKYLDQVRRLGVTPDMYAQMLRKQLTSQQLIRG-----FGNTAF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+P + + ++ ++R + + ++++ R + +
Sbjct: 175 LLPQEIDNLVKLAAQDRVVRVATIDVAAKAKALTVADDEVQSYYDQNKGRFIAP-EEFKV 233
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ SI + + ++ + ++++N+ + P + V I K +
Sbjct: 234 SYITLDAASIMDNVKIDDKAIN----DFYEQNKNDYSQPERKKFSV----IQVKNEADAT 285
Query: 282 IALKAYLSAQNTPTKIEKHEAE 303
L A + T ++ +
Sbjct: 286 SVLDALKQGGDFATLAKEKSTD 307
>gi|217973906|ref|YP_002358657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS223]
gi|217499041|gb|ACK47234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS223]
Length = 621
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 53/169 (31%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + +NG++IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSTTDVPAAEVNGDIITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + K +++ ++ L+ + L Q + G+ +
Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAFRDMMRVDMTRRQLTAA 168
>gi|126173842|ref|YP_001049991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS155]
gi|125997047|gb|ABN61122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS155]
Length = 621
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 53/169 (31%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + +NG++IT ++ +
Sbjct: 1 MLEKIRDGSQGLIAKGILVLVILSFAFAGVSSY-LGSTTDVPAAEVNGDIITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + K +++ ++ L+ + L Q + G+ +
Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAFRDMMRVDMTRRQLTAA 168
>gi|254459474|ref|ZP_05072890.1| ppic-type ppiase domain protein [Rhodobacterales bacterium
HTCC2083]
gi|206676063|gb|EDZ40550.1| ppic-type ppiase domain protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 281
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 93/303 (30%), Gaps = 52/303 (17%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-ISKRIAL-LKLQKINGE-LE 73
T + + + + + ++ T+NG IT G I R L + + + + L
Sbjct: 5 TPFLASVAAVTLLALPLSAETGIDQVVATVNGTDITMGHMIVVRSGLPDQYRNLPDDVLF 64
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K + ++I +T+ ++G + V R ++AE L
Sbjct: 65 KGILDQVIQQTI---LAAQAGGD-TPDRVRLALEN-ERRALMAAEHMDVVL--------- 110
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
++ D V + Y E RE+ +L D
Sbjct: 111 ------ADAVTEDAVAAAYEKTYAGAVPE-------------REFDASHILVETEDE--- 148
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKK 252
A + L D +L K S G + + P+F+N +K
Sbjct: 149 ---------AKALVTDLDGGADFAELAKEKSTGPSGPRGGALGWFGTGQMVPEFENAVKD 199
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + P TQ G I + D R + + A + Y+ KL
Sbjct: 200 MEVGAVSTPIKTQFGWHVIKLNDTR--SEDAPKIDDVRADLEQQVRMETVDAYIAKLTEG 257
Query: 312 AII 314
A I
Sbjct: 258 ATI 260
>gi|304409715|ref|ZP_07391335.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS183]
gi|307304071|ref|ZP_07583824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
BA175]
gi|304352233|gb|EFM16631.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS183]
gi|306912969|gb|EFN43392.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
BA175]
Length = 621
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 53/169 (31%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + +NG++IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSTTDVPAAEVNGDIITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + K +++ ++ L+ + L Q + G+ +
Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAFRDMMRVDMTRRQLTAA 168
>gi|168185280|ref|ZP_02619944.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Bf]
gi|237793360|ref|YP_002860912.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Ba4
str. 657]
gi|182671671|gb|EDT83632.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Bf]
gi|229264108|gb|ACQ55141.1| peptidil-prolyl isomerase family protein [Clostridium botulinum Ba4
str. 657]
Length = 247
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + I +NG+ ITD D+ I ++ + +ELI + +
Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ +A++ EDF L+ K+ L IQ V
Sbjct: 49 ---DFELSY-NYAKDMKFDETEDFKKQLEAT-------KKQLLIQIA---VSNALARATV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E + + K + T R +L D++ + ++ + S
Sbjct: 95 SEEESKKYYEENKEEFRTQELITARHILV---DSEEEANNIYEEIKNGLDFS-------- 143
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
EK++ G + P+F+ +L+ + T TQ G I + +
Sbjct: 144 EAAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTQAIKTQFGYHLIIVDNI 203
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + +KA + + K + E+ + LR +
Sbjct: 204 KESMIKPFDEVKAMIDNKLLQEKQNQQYNEFTQNLRDKYTVE 245
>gi|153000126|ref|YP_001365807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS185]
gi|160874748|ref|YP_001554064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS195]
gi|151364744|gb|ABS07744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS185]
gi|160860270|gb|ABX48804.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS195]
gi|315266990|gb|ADT93843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
OS678]
Length = 621
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 53/169 (31%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + +NG++IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSTTDVPAAEVNGDIITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + K +++ ++ L+ + L Q + G+ +
Sbjct: 60 QSERSRMEQQLGEMFAALSADEKYLQSIKQSVLERLVADKLIDQAAKAMGLRVSDEQIIA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AVKTEPAFQTDGKFDNDRYQAILRQLGYQPQAFRDMMRVDMTRRQLTAA 168
>gi|303238145|ref|ZP_07324681.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio
cellulolyticus CD2]
gi|302594191|gb|EFL63903.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio
cellulolyticus CD2]
Length = 249
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 73/226 (32%), Gaps = 19/226 (8%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ V Q A + L+ + + + + + + F+
Sbjct: 36 SPDGVKQLIAQLAEQELFYLDAIEKGLENETEYLEEI-ERIKVNFL-KQYALSKFLKSVT 93
Query: 158 NLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E+E N+ K +L Q++ K + + +E + K
Sbjct: 94 INEVEAKKFYNENKGLFNEPESVKASHILV-------QDEATANKILSEIDEGK----KF 142
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAIC 273
+ +++++ + G + + + P+F+ + T P TQ G I +
Sbjct: 143 EDAAKEYSTCPSKANGGDLGFFSKGQMVPEFETAAFALDKGEITKTPVKTQFGFHIIKLT 202
Query: 274 DKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KRD +A + A+ K + + V +L+ + +
Sbjct: 203 GKRDAMELTFSEAEDKVKAELMAKKQQAEYYKKVDELKGKYDVKLF 248
>gi|187776514|ref|ZP_02992987.1| hypothetical protein CLOSPO_00005 [Clostridium sporogenes ATCC
15579]
gi|187775173|gb|EDU38975.1| hypothetical protein CLOSPO_00005 [Clostridium sporogenes ATCC
15579]
Length = 247
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 95/282 (33%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + I +NG+ ITD D+ I ++ + ++LI + +
Sbjct: 1 MENNIVAIVNGQEITDKDVDNTILSFPKERQTYLNTEKGREDLIKQMI------------ 48
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ +A++ + EDF L+ K+ L IQ +V+
Sbjct: 49 ---DFELSY-NYAKDMKVDETEDFKKQLEAT-------KKQLLIQVAVSNVLAR---ATV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E + + K + T R +L D++ + K + S
Sbjct: 95 AEEEAKKYYEENKEEFRTQELITARHILV---DSEDEANSIYGKIKNGLDFS-------- 143
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
EK++ G + + P+F+ + + + T TQ G I + +
Sbjct: 144 EAAEKYSKCPSKAQGGSLGTFTKGQMVPEFEKAVFEAEVDKVTEAVKTQFGYHLIIVDNI 203
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R+ + +KA ++ + K + E+ + LR +
Sbjct: 204 RESMIKPFDEVKAMINNKLLQEKQNQQYNEFTQNLRDKYTVE 245
>gi|16078059|ref|NP_388876.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308834|ref|ZP_03590681.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. 168]
gi|221313157|ref|ZP_03594962.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221318081|ref|ZP_03599375.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. JH642]
gi|221322356|ref|ZP_03603650.1| molecular chaperone [Bacillus subtilis subsp. subtilis str. SMY]
gi|131027|sp|P24327|PRSA_BACSU RecName: Full=Foldase protein prsA; Flags: Precursor
gi|39782|emb|CAA40543.1| 33kDa lipoprotein [Bacillus subtilis subsp. subtilis str. 168]
gi|2226124|emb|CAA74418.1| 33kDa lipoprotein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633331|emb|CAB12835.1| molecular chaperone lipoprotein [Bacillus subtilis subsp. subtilis
str. 168]
Length = 292
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 96/305 (31%), Gaps = 45/305 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I + + + + +T G++ + K L ++
Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNM---KKTAGASVLTQL 57
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K ++ ++ G + +++ + G K
Sbjct: 58 VQEKVLDKKYK----------VSDKEIDNKLKEYKTQLG---DQYTALEKQYG------K 98
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
YL Q + + + + +I + +K + +L
Sbjct: 99 DYLKEQVKYELLTQKAAKDNIKVTDADIKEYWEGLKG----KIRASHIL----------- 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL-LESDLHPQF-QNLLKK 252
K+ + E +L+ + L K S S G + E + F + K
Sbjct: 144 -VADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKL 202
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRS 310
++P TQ G I ++R + +K L ++ K+ + A E V+K+
Sbjct: 203 KTGEVSDPVKTQYGYHIIKKTEERGKYDD--MKKELKSEVLEQKLNDNAAVQEAVQKVMK 260
Query: 311 NAIIH 315
A I
Sbjct: 261 KADIE 265
>gi|170720931|ref|YP_001748619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
W619]
gi|169758934|gb|ACA72250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
W619]
Length = 623
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 64/404 (15%), Positives = 124/404 (30%), Gaps = 95/404 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAASHSQDAAKVNGQTISQNELSQAA 60
Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105
+ + Q + L A++ LI L Q + + F ++
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDEKLLRDAALKGLIERKLLLQGAKDAKFAFSEAALDQVIL 120
Query: 106 ---------------FVQHARNTGLSAEDFSSFLD--------KQGIG------------ 130
F Q R G F L + GI
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMGYGRLQFREMLAEEMLIGQVRTGIAGSSFVTDQQVDA 180
Query: 131 ----------------------------------DNHFKQYLAIQSIWPDVV---KNDFM 153
+ H K+++ + D V K+ F
Sbjct: 181 FARLENQTRDFASLTFKANPAAVKVSDDEVKAHYEQHAKEFMTPDQVVIDYVELKKSAFF 240
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + E+ A +K + +L + N + RI++ E+ RL
Sbjct: 241 DQVKVTDDELKAQYEKEIANLAEQRHAAHILIEV--NDKVTDAQAKARIEEVEQ-RLAKG 297
Query: 214 KDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYI 270
+D KL K S+ S G + P F++ L K + P TQ G I
Sbjct: 298 EDFAKLAKEFSQDPGSANSGGDLGFAGPGVYDPVFEDALYKLDDGQVSAPVRTQFGYHLI 357
Query: 271 AICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ K+ ++ +LK L+ +E+ + K+L+ A
Sbjct: 358 KLLGKQAPEVPSFASLKDKLTRDLKTPLVEQRYVDASKQLQDAA 401
>gi|261856056|ref|YP_003263339.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus
neapolitanus c2]
gi|261836525|gb|ACX96292.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus
neapolitanus c2]
Length = 325
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 97/293 (33%), Gaps = 51/293 (17%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
+ + S +I TING+ + + + ++ L K E+ +Q +I L
Sbjct: 50 AMNTADTSAKVTSGKIIATINGQPL--YEENLKVIQSSLPKSKNIPEQDLIQRMIELRLL 107
Query: 87 KQEIEKSGITFDSNTV-NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ G+ + +Q+A + L+ + S +L K
Sbjct: 108 ASAARQEGL---DKQIKTKAQIQNAVDNQLANDYLSDYLSK------------------- 145
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+K + E++ N+ +Y +L + DA
Sbjct: 146 --------MKVTDAELQPEYNQFVKGYPKTTQYKAAHILVKTKEE------------ADA 185
Query: 206 EESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PY 261
+L ++L K S+ + G+ + + P+F ++K + T P
Sbjct: 186 IIKQLDSGTPFDQLAKEKSQDPGSAKQGGELGWFDADQMVPEFSAAVEKLKKGEITQQPV 245
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+Q G I + D R + A L Q + +KKLR+ A I
Sbjct: 246 KSQFGWHVIKLEDTR--LAQPPTFAELKPQLETQYRRAAIEDLIKKLRTKAKI 296
>gi|114762082|ref|ZP_01441550.1| PPIC-type PPIASE domain protein [Pelagibaca bermudensis HTCC2601]
gi|114545106|gb|EAU48109.1| PPIC-type PPIASE domain protein [Roseovarius sp. HTCC2601]
Length = 286
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 100/306 (32%), Gaps = 48/306 (15%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIALLKLQKIN 69
K LTT + + + + + T+NGE IT G +L ++
Sbjct: 3 KTLTTLSAAALAVTMAMPAQAQDQAEEMELDTVVATVNGEDITLG------HMLMVRTTL 56
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E + +++ + + Q + ++ + D N V + LS ++ L
Sbjct: 57 PEQYQQLGDDVLWDGILDQLVRQAALAQDENAVET------KRVTLSIDNERRAL----- 105
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ +VVK + ++ T +E+ +L +
Sbjct: 106 -------------LAGEVVKAIAETSVSDEAVQAAYEADYTDAETGKEFNASHILVETEE 152
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ ++ AE +R + ++ + G+ + + FQ
Sbjct: 153 DAQALVEELEGGADFAELAREK-----------STGPSGPNGGELGWFAAGMMVEPFQEA 201
Query: 250 LKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++ + + P TQ G I + + R E + + + ++ +Y+ +
Sbjct: 202 VEMLEVGAVSEPVQTQFGWHVIKLNETR--AKEAPALDEVRGEIEMSLQQQAVEKYIDET 259
Query: 309 RSNAII 314
++A +
Sbjct: 260 LASAEV 265
>gi|32473571|ref|NP_866565.1| peptidyl-prolyl cis-trans isomerase [Rhodopirellula baltica SH 1]
gi|32398251|emb|CAD78346.1| probable peptidyl-prolyl cis-trans isomerase [Rhodopirellula
baltica SH 1]
Length = 626
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 28/222 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
LL FV I+ + + A + + +N + I+ +A +Q+ +
Sbjct: 50 LLAAAFVAIL---SGFSTMRVEAAENSVVAVVNADPIS----RDSLATASVQRYGTD--- 99
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNH 133
+ LI L QE ++ G+ + V + A+ GL+ E + L+++ I +
Sbjct: 100 -VLDNLINRHLIMQECKRRGLGVTTEEVRTEINRVAKKFGLNVESYLQLLNEERDITPDQ 158
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + + IWP + + + + + + + V Q
Sbjct: 159 Y----SREIIWPMLALRKLVADEVAVSQDEFNRAFVSQFGEAIKCRMVMV---------Q 205
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ + A + ++F+ S+G
Sbjct: 206 DKSQATQLRAQAVAEPSSFARL---AKEFSEDPTSASVGGLI 244
>gi|237803592|ref|ZP_04591177.1| periplasmic folding chaperone [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025574|gb|EGI05630.1| periplasmic folding chaperone [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 627
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F+ L +++ + P T G I
Sbjct: 303 DFAALAKEFSQDPGSSSKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKA------YLSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKGKLTDELKSQLVEQKFVEVTK 399
>gi|127513432|ref|YP_001094629.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica
PV-4]
gi|126638727|gb|ABO24370.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella loihica
PV-4]
Length = 621
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 20/167 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + T+NGE I+ + +
Sbjct: 1 MLEKIREGSQGVIAKGILVLVILSFAFTGVSSYLGSSSEPS-AATVNGEEISKSALEQAY 59
Query: 59 RIALLKLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ +L++ G+ +++ ++ LI + L Q G+T +
Sbjct: 60 QSERARLEQQLGDMYDTLASNESYLASVKQNVLERLIADKLVDQAAADLGLTVSDQQIKT 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ + + + + + + G N F+ + +V
Sbjct: 120 AIMNEPAFQTDGKFDNDRYLALIRQLGYQANSFRDMMRGDMTRRQLV 166
>gi|315304396|ref|ZP_07874697.1| peptidylprolyl isomerase PrsA1 [Listeria ivanovii FSL F6-596]
gi|313627234|gb|EFR96066.1| peptidylprolyl isomerase PrsA1 [Listeria ivanovii FSL F6-596]
Length = 245
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 64/219 (29%), Gaps = 36/219 (16%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
VN F ++ G + F + L + G+ + FK L +V+
Sbjct: 17 KVTDEQVNSEFKKYKSQYG---DQFDAVLAQSGLTEETFKSQLKYNL----LVQKATEAN 69
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ + + +L + E +L+
Sbjct: 70 TDTSD----KALKEYYKTWQPDITVSHIL------------VADEAKAKEVEQKLKDGAK 113
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS------QNNTTNPYVTQKGVEY 269
L K S D + L + +K+ + + + P TQ G
Sbjct: 114 FADLAKEYST--DTATKDNGGELAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHI 171
Query: 270 IAICD-----KRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + D + ++YL +Q T ++K +
Sbjct: 172 IQMDKPATKTTYDKDKKAVKESYLQSQLTTENMQKTLKK 210
>gi|163792785|ref|ZP_02186762.1| hypothetical protein BAL199_18098 [alpha proteobacterium BAL199]
gi|159182490|gb|EDP66999.1| hypothetical protein BAL199_18098 [alpha proteobacterium BAL199]
Length = 329
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 12/188 (6%)
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
A + V + ++ + +T R F+ + + +
Sbjct: 134 AADLAKREDVARRIRRAEDQVLSQVYLTETIAAQVTEDALRERYKTFA-AEQSGREEAHA 192
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIH-------DVSIGKAQYLLESDLHPQF-QNLL 250
+ D E+ + D +K FA+ G + + P+F Q
Sbjct: 193 SHILLDTEDQAKAVIADLDKGGDFAALAKERSTDPAGAEGGDLGWFSAEQMVPEFSQAAF 252
Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P +Q G I + +KR E + Q + + LR
Sbjct: 253 ALTPGTYSKEPVKSQFGWHVIKLVEKRTT--EAPAFEQVRDQLASELSRELITAKLDTLR 310
Query: 310 SNAIIHYY 317
+ I +
Sbjct: 311 AGVKIERF 318
>gi|218848095|ref|YP_002454772.1| foldase protein PrsA [Bacillus cereus G9842]
gi|218546226|gb|ACK98619.1| foldase protein PrsA [Bacillus cereus G9842]
Length = 299
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 77/227 (33%), Gaps = 28/227 (12%)
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-DNHFKQ 136
Q + + + ++K ++ + G S F+ FL + G+ + K
Sbjct: 58 QRTLDDMITLTVLQK-KYKVSDGEIDDEIKRLKSEFGNS---FNDFLSQNGVNNEEQLKD 113
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + + + + + ++ A ++ K E + +L ++
Sbjct: 114 VIKLD----KLKQKLALEHLKIQDKDLKALYEQKK----PEIRVSHILV-------SDET 158
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ 254
+ + +D L K S+ G Y E D+ FQ+ +K +
Sbjct: 159 LAKDIKSKIDS-----GEDFGSLAKEFSQDIATKEKGGDIGYFKEGDMVQAFQDAARKLK 213
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ P T G I + D++ L +K L ++ K+++
Sbjct: 214 VGEVSQPVKTDFGYHVIKLLDEKKLPSFEQMKPQLQSELISNKMDQA 260
>gi|165933466|ref|YP_001650255.1| peptidyl-prolyl cis-trans isomerase [Rickettsia rickettsii str.
Iowa]
gi|165908553|gb|ABY72849.1| peptidyl-prolyl cis-trans isomerase [Rickettsia rickettsii str.
Iowa]
Length = 282
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 94/305 (30%), Gaps = 50/305 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKING-----ELEK 74
+ +IF V ++S ++A ++ T G + I K L LQ +
Sbjct: 4 LSVIFLSVSMLSGIAFADKDKVVATYKGGEVKASQIMKEFKPQLNLQSGETIKNFDDFPP 63
Query: 75 IAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++LI L K+E+ KS IT S L+ ++ + K I
Sbjct: 64 QDQEKLIKIYVNNLLLKEEVAKSNIT-SSKEFQEKLEN--AKNQLAQQELLANYIKSNIT 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
D F N +++ E + + +L +
Sbjct: 121 DKMFDDEY-----------NKYVVNLKGKE----------------QIKVAHILVK---S 150
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249
+ + K K ++L +K S + IG L P+F +
Sbjct: 151 QKEANDIKTKLSKGGNFTKLAEELSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKA 206
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
N + P T G I + +K+ + I K + +Y+ L
Sbjct: 207 FALKVNEVSTPVKTDFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKKYIADLE 264
Query: 310 SNAII 314
+ A +
Sbjct: 265 AKANV 269
>gi|78061944|ref|YP_371852.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
gi|77969829|gb|ABB11208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
Length = 296
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 61/190 (32%), Gaps = 12/190 (6%)
Query: 137 YLAIQSIWPDVVKNDFMLKY--------GNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
A++ D+V ++ + E++ +K + R + + ++P
Sbjct: 94 QAAVEQARRDIVVRSYLASVNAPPADYPSDTELQSAYDKNRAAFTAPRALHVAQIYIAVP 153
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQ 247
N ++ SR R + + K + G ++ + + P +
Sbjct: 154 PNADAATLDKARKQAADLASRARSGDFAALAKANSQDKASAANGGDLGFVPDQLMVPAVR 213
Query: 248 NLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEY 304
+ P T G + + D R K L A + +++ Y
Sbjct: 214 QAADALKPGQVSAPIQTPAGFHVVKLIDVRAAAPRPLADVKEQLRAMLRAQRTQQNAQAY 273
Query: 305 VKKLRSNAII 314
+ KL +NA I
Sbjct: 274 LAKLAANAPI 283
>gi|320325365|gb|EFW81432.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
glycinea str. B076]
Length = 627
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSSKGGDLGYAGKGVYDPAFEDTLYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKDKLTTDLKSQLVEQKFVEVTK 399
>gi|298486267|ref|ZP_07004330.1| Peptidyl-prolyl cis-trans isomerase ppiD [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|298159274|gb|EFI00332.1| Peptidyl-prolyl cis-trans isomerase ppiD [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 627
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSSKGGDLGYAGKGVYDPAFEDTLYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKDKLTTDLKSQLVEQKFVEVTK 399
>gi|327541670|gb|EGF28194.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopirellula
baltica WH47]
Length = 599
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 28/222 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
LL FV I+ + + A + + +N + I+ +A +Q+ +
Sbjct: 23 LLAAAFVAIL---SGFSTMRVEAAENSVVAVVNADPIS----RDSLATASVQRYGTD--- 72
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNH 133
+ LI L QE ++ G+ + V + A+ GL+ E + L+++ I +
Sbjct: 73 -VLDNLINRHLIMQECKRRGLGVTTEEVRTEINRVAKKFGLNVESYLQLLNEERDITPDQ 131
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + + IWP + + + + + + + V Q
Sbjct: 132 Y----SREIIWPMLALRKLVADEVAVSQDEFNRAIVSQFGEAIKCRMVMV---------Q 178
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ + A + ++F+ S+G
Sbjct: 179 DKSQATQLRAQAVAEPSSFARL---AKEFSEDPTSASVGGLI 217
>gi|139439422|ref|ZP_01772863.1| Hypothetical protein COLAER_01883 [Collinsella aerofaciens ATCC
25986]
gi|133775201|gb|EBA39021.1| Hypothetical protein COLAER_01883 [Collinsella aerofaciens ATCC
25986]
Length = 407
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/346 (12%), Positives = 113/346 (32%), Gaps = 37/346 (10%)
Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIV--SYKSWAMSSRIRTTINGEVITDGDISKR 59
T K+ + + +L + + ++ + + ++ + TING +T+ ++K+
Sbjct: 36 TVKIVLVVIGVLAMLLSVSAMACSGLMSQTESASSGYKLTGGVAATINGTNLTEDTVTKQ 95
Query: 60 IALLKLQ----KINGELEKIAVQELIVETLKKQEI-------------EKSGITFDSNTV 102
I ++ K + + +L + +KQ I +++G+T V
Sbjct: 96 IMSMRTSYGYTKDKDWAQYLVDNDLTPKKYRKQLIDSYAQQILLQQAQKENGVTVSDEEV 155
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ ++ G A+ F L G ++ +K L + + E
Sbjct: 156 EKAWKDACKSAG-GAKAFKKTLKTYGYTEDTYKDSLKESLAQQKLKDA-VAPTSKPKDSE 213
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEK 221
I + + +L + + + + ++ + +
Sbjct: 214 IVDYINENLSNYNDARRSSNILIKVDSDASDEDKAAAKAKAQECLDKINSGELSFEDAVE 273
Query: 222 FASKIHDV--SIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYI-------- 270
S G + + +Q L+ ++ + ++ + G I
Sbjct: 274 QYSDDTGSKDKKGDVGWDKLTTFVDSYQAALEGLNKGDVSDVVESTYGYHIIKCTDYFHV 333
Query: 271 --AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ D + + +I K Y+S +E++++ + +A I
Sbjct: 334 DNQVDDIKQVPKDI--KKYVSNVVKTQAASTAYSEWLEQYKKDADI 377
>gi|289679420|ref|ZP_06500310.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
syringae FF5]
gi|330897791|gb|EGH29210.1| periplasmic folding chaperone [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330939710|gb|EGH43005.1| periplasmic folding chaperone [Pseudomonas syringae pv. pisi str.
1704B]
Length = 627
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/402 (14%), Positives = 115/402 (28%), Gaps = 103/402 (25%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADAKFSFSDAALD 120
Query: 104 YF-----------------FVQHARNTGLSAEDFSSFLDK--------QGIG-------- 130
F Q R G S F L + G+
Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQFRQMLGQEMLIGQVRAGVAGSAFVTDA 180
Query: 131 --------------------------------------DNHFKQYLAIQSIWPDVV---K 149
D H K++++ + + D + K
Sbjct: 181 QVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIELKK 240
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ F K + ++ A QK + +L + N N + +I++ ++ R
Sbjct: 241 SSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-R 297
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
L +D L K S+ S G Y + P F+ L +++ + P T G
Sbjct: 298 LAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRTDFG 357
Query: 267 VEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
I + L +Q K +
Sbjct: 358 WHLIKLLGVEAPSVPTFASLKGKLTNDLKSQLVEQKFVEVTK 399
>gi|148378054|ref|YP_001252595.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A
str. ATCC 3502]
gi|153931321|ref|YP_001382453.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A
str. ATCC 19397]
gi|153936847|ref|YP_001386006.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A
str. Hall]
gi|153940453|ref|YP_001389411.1| peptidil-prolyl isomerase family protein [Clostridium botulinum F
str. Langeland]
gi|168181156|ref|ZP_02615820.1| peptidil-prolyl isomerase family protein [Clostridium botulinum
NCTC 2916]
gi|170757604|ref|YP_001779674.1| peptidil-prolyl isomerase family protein [Clostridium botulinum B1
str. Okra]
gi|226947272|ref|YP_002802363.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A2
str. Kyoto]
gi|148287538|emb|CAL81602.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium botulinum
A str. ATCC 3502]
gi|152927365|gb|ABS32865.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A
str. ATCC 19397]
gi|152932761|gb|ABS38260.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A
str. Hall]
gi|152936349|gb|ABS41847.1| peptidil-prolyl isomerase family protein [Clostridium botulinum F
str. Langeland]
gi|169122816|gb|ACA46652.1| peptidil-prolyl isomerase family protein [Clostridium botulinum B1
str. Okra]
gi|182668005|gb|EDT79984.1| peptidil-prolyl isomerase family protein [Clostridium botulinum
NCTC 2916]
gi|226843846|gb|ACO86512.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A2
str. Kyoto]
gi|295317521|gb|ADF97898.1| peptidil-prolyl isomerase family protein [Clostridium botulinum F
str. 230613]
Length = 247
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + I +NG+ ITD D+ I ++ + +ELI + +
Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ +A++ EDF L+ K+ L IQ V
Sbjct: 49 ---DFELSY-NYAKDMKFDETEDFKKQLEAT-------KKQLLIQVA---VSNALARATV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E + + K + T R +L D++ + ++ + S
Sbjct: 95 SEEESKKYYEENKEEFRTQELITARHILV---DSEEEANNIYEEIKNGLDFS-------- 143
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
EK++ G + P+F+ +L+ + T TQ G I + +
Sbjct: 144 EAAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTQAIKTQFGYHLIIVDNI 203
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + +KA + + K + E+ + LR +
Sbjct: 204 KESMIKPFDEVKAMIDNKLLQEKQNQQYNEFTQNLRDKYTVE 245
>gi|302333506|gb|ADL23699.1| peptidylprolyl isomerase, PrsA [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 320
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 83/237 (35%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + K+ +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKNPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K ++ + G I D E K L + K++K+
Sbjct: 217 EKALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNSE---KQSLKEKLVDQKVQKNPK 270
>gi|33597580|ref|NP_885223.1| peptidyl-prolyl cis-trans isomerase D [Bordetella parapertussis
12822]
gi|33574008|emb|CAE38331.1| peptidyl-prolyl cis-trans isomerase D [Bordetella parapertussis]
Length = 671
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 81/229 (35%), Gaps = 23/229 (10%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIA 61
++ + +++L+ ++ F +V + Y S+ T+ G+ +T + + R
Sbjct: 23 EIIRTHRRWMQLILLLLIVPSFMLVGVQGYDSFINREPELATVAGQPVTRSEFDQAHRNQ 82
Query: 62 LLKLQKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
L +L++ G + + + +LI + L +G + T+
Sbjct: 83 LEQLRQRLGSQFDPAMIDTPAMREQLLNQLIDQRLLAVVAADNGFSVSDGTLRNTIAAIP 142
Query: 111 R---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ N S E + L QG+ F+ L D+ +
Sbjct: 143 QVQDNGRFSPERYRQVLAAQGMSPTSFEAGLR-----RDLAVARVLDPISQSASVPAEVA 197
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPK 214
+ ++ + ++ F+ D + + Q DA + +LR+P+
Sbjct: 198 RSVEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQEQLRVPE 246
>gi|296332416|ref|ZP_06874877.1| molecular chaperone lipoprotein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305673697|ref|YP_003865369.1| molecular chaperone lipoprotein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150334|gb|EFG91222.1| molecular chaperone lipoprotein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411941|gb|ADM37060.1| molecular chaperone lipoprotein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 284
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 98/304 (32%), Gaps = 44/304 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I + + + + +T G++ + K L ++
Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNM---KKTAGASVLTQL 57
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K ++ ++ G + +++ ++ G K
Sbjct: 58 VQEKVLDKKYK----------VTDKEIDNKLKEYKTQLG---DQYTALEEQYG------K 98
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
YL Q + + + + + + +K+ + +L
Sbjct: 99 DYLKEQVKYELLTQKAAKDNIKVTDADTKEYWEGLKD----KIRASHIL----------- 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKS 253
K+ + E +L+ + L K S + S G + + + +F + K
Sbjct: 144 -VADKKTAEEVEKKLKKGEKFEDLAKEYSTDNSASQGGDLGWFAKDGMVAEFSKAAFKLK 202
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRSN 311
++P TQ G I ++R + +K L ++ K+ A E V+K+
Sbjct: 203 TGEVSDPVKTQYGYHIIKKTEERGKYDD--MKKELKSEVLEQKLNDTTAVQEAVQKVMKK 260
Query: 312 AIIH 315
A +
Sbjct: 261 ADVE 264
>gi|254514389|ref|ZP_05126450.1| peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium
NOR5-3]
gi|219676632|gb|EED32997.1| peptidyl-prolyl cis-trans isomerase D [gamma proteobacterium
NOR5-3]
Length = 622
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 17/171 (9%)
Query: 43 RTTINGEVITDGDISKRI-----ALLKLQKINGELE--------KIAVQELIVETLKKQE 89
+NGE I+ + + + LL + + + + A++ LI + KQ
Sbjct: 42 VAEVNGEEISPFALQQELSVQQRRLLSILGEDADPALLDQAQMSQQALETLIQREIIKQA 101
Query: 90 IEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+ G+ + Q + S + F L G F++ LA
Sbjct: 102 AKDMGLNTSDQAIADIVGSMEQFQIDGQFSPDLFQGALASAGFTPALFRERLAEDVEIGQ 161
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + E E+ Y+ +L I +L ++
Sbjct: 162 L-RAGVAGSDFSTEAELDLAASIALEGRDVRYISLPLLDFIASVELSDEAV 211
>gi|15924831|ref|NP_372365.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927415|ref|NP_374948.1| hypothetical protein SA1659 [Staphylococcus aureus subsp. aureus
N315]
gi|21283511|ref|NP_646599.1| hypothetical protein MW1782 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486658|ref|YP_043879.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650630|ref|YP_186723.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus COL]
gi|87162356|ref|YP_494473.1| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195663|ref|YP_500469.1| protein export protein PrsA [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150394374|ref|YP_001317049.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus
aureus subsp. aureus JH1]
gi|151221945|ref|YP_001332767.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156980157|ref|YP_001442416.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus Mu3]
gi|161510056|ref|YP_001575715.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142176|ref|ZP_03566669.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315172|ref|ZP_04838385.1| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253732497|ref|ZP_04866662.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|255006629|ref|ZP_05145230.2| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793800|ref|ZP_05642779.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9781]
gi|258413737|ref|ZP_05682010.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9763]
gi|258420756|ref|ZP_05683695.1| foldase prsA [Staphylococcus aureus A9719]
gi|258438417|ref|ZP_05689701.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A9299]
gi|258443862|ref|ZP_05692201.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A8115]
gi|258447317|ref|ZP_05695464.1| peptidylprolyl isomerase [Staphylococcus aureus A6300]
gi|258448200|ref|ZP_05696327.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A6224]
gi|258452669|ref|ZP_05700668.1| foldase prsA [Staphylococcus aureus A5948]
gi|258453367|ref|ZP_05701350.1| foldase prsA [Staphylococcus aureus A5937]
gi|262052668|ref|ZP_06024860.1| hypothetical protein SA930_0804 [Staphylococcus aureus 930918-3]
gi|269203478|ref|YP_003282747.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus ED98]
gi|282895139|ref|ZP_06303358.1| foldase prsA [Staphylococcus aureus A8117]
gi|282924172|ref|ZP_06331847.1| foldase prsA [Staphylococcus aureus A9765]
gi|282928579|ref|ZP_06336178.1| foldase prsA [Staphylococcus aureus A10102]
gi|284024887|ref|ZP_06379285.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus 132]
gi|294850269|ref|ZP_06791004.1| foldase prsA [Staphylococcus aureus A9754]
gi|295406147|ref|ZP_06815955.1| foldase prsA [Staphylococcus aureus A8819]
gi|296276027|ref|ZP_06858534.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus MR1]
gi|297207443|ref|ZP_06923880.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297244929|ref|ZP_06928806.1| foldase prsA [Staphylococcus aureus A8796]
gi|300911528|ref|ZP_07128973.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380557|ref|ZP_07363232.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|46396696|sp|P60747|PRSA_STAAM RecName: Full=Foldase protein prsA; Flags: Precursor
gi|46396697|sp|P60748|PRSA_STAAN RecName: Full=Foldase protein prsA; Flags: Precursor
gi|46396698|sp|P60749|PRSA_STAAW RecName: Full=Foldase protein prsA; Flags: Precursor
gi|56749190|sp|Q6G894|PRSA_STAAS RecName: Full=Foldase protein prsA; Flags: Precursor
gi|81694206|sp|Q5HET4|PRSA_STAAC RecName: Full=Foldase protein prsA; Flags: Precursor
gi|122540695|sp|Q2G2S6|PRSA_STAA8 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|123485269|sp|Q2FFQ5|PRSA_STAA3 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|189037914|sp|A7X3U8|PRSA_STAA1 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|189037915|sp|A6U2U4|PRSA_STAA2 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|189037916|sp|A6QI23|PRSA_STAAE RecName: Full=Foldase protein prsA; Flags: Precursor
gi|189037917|sp|A8YY10|PRSA_STAAT RecName: Full=Foldase protein prsA; Flags: Precursor
gi|13701634|dbj|BAB42927.1| prsA [Staphylococcus aureus subsp. aureus N315]
gi|14247613|dbj|BAB58003.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204952|dbj|BAB95647.1| prsA [Staphylococcus aureus subsp. aureus MW2]
gi|49245101|emb|CAG43567.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57284816|gb|AAW36910.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus COL]
gi|87128330|gb|ABD22844.1| foldase protein PrsA precursor [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203221|gb|ABD31031.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|149946826|gb|ABR52762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus
aureus subsp. aureus JH1]
gi|150374745|dbj|BAF68005.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722292|dbj|BAF78709.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus Mu3]
gi|160368865|gb|ABX29836.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723778|gb|EES92507.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257787772|gb|EEV26112.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9781]
gi|257839524|gb|EEV63995.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A9763]
gi|257843360|gb|EEV67770.1| foldase prsA [Staphylococcus aureus A9719]
gi|257848461|gb|EEV72452.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A9299]
gi|257851268|gb|EEV75211.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus A8115]
gi|257853904|gb|EEV76860.1| peptidylprolyl isomerase [Staphylococcus aureus A6300]
gi|257858439|gb|EEV81315.1| peptidyl-prolyl cis/trans-isomerase [Staphylococcus aureus A6224]
gi|257859644|gb|EEV82493.1| foldase prsA [Staphylococcus aureus A5948]
gi|257864459|gb|EEV87204.1| foldase prsA [Staphylococcus aureus A5937]
gi|259159417|gb|EEW44469.1| hypothetical protein SA930_0804 [Staphylococcus aureus 930918-3]
gi|262075768|gb|ACY11741.1| protein export protein PrsA, putative [Staphylococcus aureus subsp.
aureus ED98]
gi|269941312|emb|CBI49709.1| putative peptidyl-prolyl cis-isomerase [Staphylococcus aureus
subsp. aureus TW20]
gi|282589788|gb|EFB94873.1| foldase prsA [Staphylococcus aureus A10102]
gi|282592967|gb|EFB97969.1| foldase prsA [Staphylococcus aureus A9765]
gi|282762483|gb|EFC02624.1| foldase prsA [Staphylococcus aureus A8117]
gi|285817521|gb|ADC38008.1| Foldase protein PrsA precursor [Staphylococcus aureus 04-02981]
gi|294822885|gb|EFG39319.1| foldase prsA [Staphylococcus aureus A9754]
gi|294969144|gb|EFG45165.1| foldase prsA [Staphylococcus aureus A8819]
gi|296887906|gb|EFH26802.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178009|gb|EFH37257.1| foldase prsA [Staphylococcus aureus A8796]
gi|300887160|gb|EFK82360.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751650|gb|ADL65827.1| peptidylprolyl isomerase, PrsA [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340886|gb|EFM06811.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312830213|emb|CBX35055.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315130515|gb|EFT86501.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196811|gb|EFU27155.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141309|gb|EFW33154.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143563|gb|EFW35343.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329727671|gb|EGG64127.1| putative foldase protein PrsA [Staphylococcus aureus subsp. aureus
21172]
gi|329729514|gb|EGG65916.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp.
aureus 21189]
gi|329732962|gb|EGG69306.1| PPIC-type PPIASE domain protein [Staphylococcus aureus subsp.
aureus 21193]
Length = 320
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K + + G I D E K L + K++K+
Sbjct: 217 EKALFKLKDGEVSEVVKSSFGYHIIKADKPTDFNSE---KQSLKEKLVDQKVQKNPK 270
>gi|299142781|ref|ZP_07035910.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris
C735]
gi|298575810|gb|EFI47687.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella oris
C735]
Length = 464
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 87/275 (31%), Gaps = 19/275 (6%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIAL---LKLQKINGELEKIAVQELIVETLKK 87
VS ++ + + E I D+ + + L ++ K G + +++ V+ L
Sbjct: 29 VSVPEHSVIDEVVWVVGDEPIMKSDVEQ-MRLQGEMEGMKWGGNPDCRIPEQIAVQKLFL 87
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ I + + Q SA + QG + + L +
Sbjct: 88 HQAALDSIEVTESDIAQTVEQQINYWINSAGSREKLEEYQGKSLSQIRSDLHDDVKNSKM 147
Query: 148 V---KNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKLQNQGFVQK 200
+ K M ++ + + ++ E + +L P V+
Sbjct: 148 IQQMKRKIMSDVTVTPADVRRYFKNLPEDSIPFVPTEVEV-EILVKKPRIPQSEINRVKD 206
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNN 256
+++ + + + L + S+ + G+ Y L P F ++
Sbjct: 207 QLRSFTDRVTKGETSFSTLARLYSEDPGSARQGGEMDYAGRGTLDPAFASVAFNLTDPKK 266
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ ++ G I + DKR G+ ++ +
Sbjct: 267 ISKIVESEFGYHIIQLVDKR---GDKVKVRHILLK 298
>gi|257483811|ref|ZP_05637852.1| peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|320327650|gb|EFW83658.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330985643|gb|EGH83746.1| periplasmic folding chaperone [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331012683|gb|EGH92739.1| periplasmic folding chaperone [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 627
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSSKGGDLGYAGKGVYDPAFEDTLYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKDKLTTDLKSQLVEQKFVEVTK 399
>gi|33592803|ref|NP_880447.1| peptidyl-prolyl cis-trans isomerase D [Bordetella pertussis Tohama
I]
gi|33572451|emb|CAE42019.1| peptidyl-prolyl cis-trans isomerase D [Bordetella pertussis Tohama
I]
gi|332382216|gb|AEE67063.1| peptidyl-prolyl cis-trans isomerase D [Bordetella pertussis CS]
Length = 651
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 81/229 (35%), Gaps = 23/229 (10%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIA 61
++ + +++L+ ++ F +V + Y S+ T+ G+ +T + + R
Sbjct: 3 EIIRTHRRWMQLILLLLIVPSFMLVGVQGYDSFINREPELATVAGQPVTRSEFDQAHRNQ 62
Query: 62 LLKLQKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
L +L++ G + + + +LI + L +G + T+
Sbjct: 63 LEQLRQRLGSQFDPAMIDTPAMREQLLNQLIDQRLLAVVAADNGFSVSDGTLRNTIAAIP 122
Query: 111 R---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ N S E + L QG+ F+ L D+ +
Sbjct: 123 QVQDNGRFSPERYRQVLAAQGMSPTSFEAGLR-----RDLAVARVLDPISQSASVPAEVA 177
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPK 214
+ ++ + ++ F+ D + + Q DA + +LR+P+
Sbjct: 178 RSVEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQEQLRVPE 226
>gi|33601983|ref|NP_889543.1| peptidyl-prolyl cis-trans isomerase D [Bordetella bronchiseptica
RB50]
gi|33576421|emb|CAE33499.1| peptidyl-prolyl cis-trans isomerase D [Bordetella bronchiseptica
RB50]
Length = 671
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 81/229 (35%), Gaps = 23/229 (10%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIA 61
++ + +++L+ ++ F +V + Y S+ T+ G+ +T + + R
Sbjct: 23 EIIRTHRRWMQLILLLLIVPSFMLVGVQGYDSFINREPELATVAGQPVTRSEFDQAHRNQ 82
Query: 62 LLKLQKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
L +L++ G + + + +LI + L +G + T+
Sbjct: 83 LEQLRQRLGSQFDPAMIDTPAMREQLLNQLIDQRLLAVVAADNGFSVSDGTLRNTIAAIP 142
Query: 111 R---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ N S E + L QG+ F+ L D+ +
Sbjct: 143 QVQDNGRFSPERYRQVLAAQGMSPTSFEAGLR-----RDLAVARVLDPISQSASVPAEVA 197
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPK 214
+ ++ + ++ F+ D + + Q DA + +LR+P+
Sbjct: 198 RSVEAALTQRRTVQLRQFAASDFRAKVTVSPQDIQAWYDANQEQLRVPE 246
>gi|71737764|ref|YP_273939.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558317|gb|AAZ37528.1| peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 627
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSSKGGDLGYAGKGVYDPAFEDTLYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKDKLTTDLKSQLVEQKFVEVTK 399
>gi|117618139|ref|YP_856546.1| peptidylprolyl cis-trans isomerase D [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559546|gb|ABK36494.1| peptidylprolyl cis-trans isomerase D [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 636
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 59/186 (31%), Gaps = 20/186 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57
M K+ + + +++ F + + SY + + T+NG I+ +
Sbjct: 1 MLDKLREGAQGKVAKVILGLIILSFALAGVGSYLN-GPARTAPATVNGNDISSAALENAY 59
Query: 58 ----KRI------ALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R+ + +L + + + LI + L + + G+ +
Sbjct: 60 RNERARMESQMGESFSQLAANPDYMKQFRRGVLDRLIDQALFDSKARELGLRVSDEQIKQ 119
Query: 105 F---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ A + + + + + + G+ F+ L + ++ ++
Sbjct: 120 AIVAMPEFAEDGKFNNDRYLQLIRRAGMTPEMFRDSLRQDMVRQQLMGALLGTEFALKGE 179
Query: 162 EIPANK 167
+K
Sbjct: 180 AEQLDK 185
>gi|315185798|gb|EFU19564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
thermophila DSM 6578]
Length = 346
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 51/343 (14%), Positives = 120/343 (34%), Gaps = 41/343 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KIN 69
++L +++ + P A +R++ T EVIT + LL+ Q +++
Sbjct: 1 MRLWKIVLGVVVMGLFPAFGQIIDAPVARVKLT-KLEVITQRQFKADVELLEKQLGRQLS 59
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT--GLSAEDFSSFLD-K 126
E K + I E L Q EK ++ ++ Q+ ++ +S ++F ++ +
Sbjct: 60 LEERKQLLDARIGEILIYQAAEKEYLSVTQEELSQAIAQYKQSVAPNVSDQEFRRLIESQ 119
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL-- 184
G+ F++ + + I + + N+ +++ N + + ++
Sbjct: 120 GGMTWEQFQEQMKKRLIAEKYLYQKKGQEIQNVPAPSEEEIRRVYNENISNFTAPEMVRY 179
Query: 185 --FSIPDNKLQNQGFVQ------KRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKA- 234
I L ++ + + K+ + S + + K AS+ +G
Sbjct: 180 SHIFIDTRGLSDEEKKKAYNRVLQVKKEVDGSLEKFREAVEKYSDDQASRYQGGDVGYLL 239
Query: 235 --QYLLESDLHPQ-FQNLLKKSQNNTTNPYVTQKGVEYIAIC-----------------D 274
ES L + F + N ++ + G + +
Sbjct: 240 RTDKQRESFLGKEFFSKIFSLPLNKVSDVLASNVGYHIVVVTEHHEPRLLGLDDRLLPNS 299
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
K+ + +I Q +K + +++LRS A + Y
Sbjct: 300 KQTVRDQITALLV--GQKRQEAYQKALQKLIEELRSQADVSIY 340
>gi|330952802|gb|EGH53062.1| periplasmic folding chaperone [Pseudomonas syringae Cit 7]
Length = 627
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 57/402 (14%), Positives = 115/402 (28%), Gaps = 103/402 (25%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADAKFSFSDAALD 120
Query: 104 YF-----------------FVQHARNTGLSAEDFSSFLDK--------QGIG-------- 130
F Q R G S F L + G+
Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRLQFRQMLGQEMLIGQVRAGVAGSAFVTDA 180
Query: 131 --------------------------------------DNHFKQYLAIQSIWPDVV---K 149
D H K++++ + + D + K
Sbjct: 181 QVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIELKK 240
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ F K + ++ A QK + +L + N N + +I++ ++ R
Sbjct: 241 SSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-R 297
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
L +D L K S+ S G Y + P F+ L +++ + P T G
Sbjct: 298 LAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRTDFG 357
Query: 267 VEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
I + L +Q K +
Sbjct: 358 WHLIKLLGVEAPSVPTFASLKSKLTNDLKSQLVEQKFVEVTK 399
>gi|227510549|ref|ZP_03940598.1| peptidylprolyl isomerase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190201|gb|EEI70268.1| peptidylprolyl isomerase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 293
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 99/288 (34%), Gaps = 45/288 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+I ++S+ A S+ T NG IT+ + +L L+++ + +++
Sbjct: 5 LIVLAGVLMSFTLAACGSKSVATTNGGKITES--AYYSSLKGTSSGKQVLQQMILNKVLE 62
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
++ G + VN F ++ + G S F++ L + G+ + K +
Sbjct: 63 --------KQYGKKVKDSAVNKDFNKYKKQYGSS---FNAVLQQNGMTASQLKDSIRSNL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ V+ + ++ A K +TV + L+ +K
Sbjct: 112 LLQQAVR----DNTKFTDAQLKAQFKSYQPKVTVNQILVS-----------------KKS 150
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQFQN-LLKKSQ 254
+ +L+ K + L K S D + + + L F+ K
Sbjct: 151 TAETVIKQLKAGKSFSSLAKKYST--DTATKNKGGRISAFDNTNTSLDSNFKKAAFKLKN 208
Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ T P TQ G + I + + G ++ L Q ++ +
Sbjct: 209 GDYTKTPVKTQYGYQVIQMVNHPAKGTYKDHESELKTQLVDKRLADSD 256
>gi|330959391|gb|EGH59651.1| periplasmic folding chaperone [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 627
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 80/223 (35%), Gaps = 29/223 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + + + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEIKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N+ + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLAEQRRAAHILIEV--NDKLNEEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEDALYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +LK L+ ++E+ E K+L +A
Sbjct: 363 LLGVEAPSVPTFASLKDKLTNDLKSQQVEQKFVEVTKQLEDSA 405
>gi|145298875|ref|YP_001141716.1| peptidyl-prolyl cis-trans isomerase D [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851647|gb|ABO89968.1| peptidyl-prolyl cis-trans isomerase D [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 637
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 59/186 (31%), Gaps = 20/186 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57
M K+ + + +++ F + + SY + + T+NG I+ +
Sbjct: 2 MLDKLREGAQGKVAKVILGLIILSFALAGVGSYLN-GPARTAPATVNGNDISSAALENAY 60
Query: 58 ----KRI------ALLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R+ + +L + + + LI + L + + G+ +
Sbjct: 61 RNERARMESQMGESFSQLAANPDYMKQFRRGVLDRLIDQALFDSKARELGLRVSDEQIKQ 120
Query: 105 F---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ A + + + + + + G+ F+ L + ++ ++
Sbjct: 121 AIIAMPEFAEDGKFNNDRYLQLIRRAGMTPEMFRDSLRQDMVRQQLMGALLGTEFALKGE 180
Query: 162 EIPANK 167
+K
Sbjct: 181 AEQLDK 186
>gi|327480677|gb|AEA83987.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas stutzeri DSM
4166]
Length = 618
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 74/228 (32%), Gaps = 29/228 (12%)
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ I + +N F+ +A + E ++ + F +
Sbjct: 198 AQHEAIEVSDDQINEFYEANADRFR-TPEQV--VVEYVELKKESFFDQVEA--------- 245
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E+ QK + +L I + + +I + +R
Sbjct: 246 ---------SDEELQELYQKQIANLAEQRRAAHIL--IETGGELSDDEAKAKIDEI-AAR 293
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
++ +D + K S+ + G + P F++ L ++ + P ++ G
Sbjct: 294 VKNGEDFATVAKEVSQDPGSANEGGDLGFAGPGVYDPAFEDALYALNEGEVSAPVKSEFG 353
Query: 267 VEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
I + + ++ ++K L + ++E+ E K+L A
Sbjct: 354 WHIIKLLGVQSPEVPSFESMKPELVRELKAQQVEQRFVETSKQLEDAA 401
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 60/181 (33%), Gaps = 17/181 (9%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + + A +++ +NGE I+ D+ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVVLLALTGFDAIFNAASNAQNAAEVNGEEISRYDLDQAM 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q L A+ LI L Q + + F ++ +
Sbjct: 61 NMQRRQLAQQLGQDFDPSLLDDRLLRDAALGSLIDRMLLLQAAKGANFAFSREALDQLIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + + F + + G F+Q L + + + + + ++
Sbjct: 121 QTPEFQVDGAFNPARFDQVIQQMGYSRLQFRQLLEQEMLIGQL-RAGISGTGFVTDQQVQ 179
Query: 165 A 165
Sbjct: 180 N 180
>gi|168187039|ref|ZP_02621674.1| foldase protein PrsA [Clostridium botulinum C str. Eklund]
gi|169295091|gb|EDS77224.1| foldase protein PrsA [Clostridium botulinum C str. Eklund]
Length = 348
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/344 (12%), Positives = 108/344 (31%), Gaps = 40/344 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSY-------KSWAMSSRIRTTINGEVITDGDISKRIALLK- 64
+K + + C+ + + A++ + + + IT G++ + +
Sbjct: 1 MKNIRKLVAAVAMCVFSVSAVGCSMIEKTPEAINKTVVAKVGDKKITKGELDSNFGVKRY 60
Query: 65 -----------------LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV----N 103
+++ +++ VQ++ + KQE EK + + + +
Sbjct: 61 AEQFKAQYGDNYAENPQVKEQLKQVKLAVVQQMAAQEALKQEAEKLKLVPKEDELKKEAD 120
Query: 104 YFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ + + + F + G F+ + I + +N+ E E
Sbjct: 121 KKIQEIKKEQNIKTDQDFDKMVKASGFTKEGFENLVKDNVILEKL-QNELTKNVKVDEKE 179
Query: 163 IPANKQKMKNI------TVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKD 215
+ + K+ + + ++ + ++ + K IK+
Sbjct: 180 MQKYYETHKDKYPKDPKNPTKVHLAHIILQPKSQEDVSKVESEIKSIKEELNKGADFSIL 239
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
K + SK +G + + L ++P TQ G I + K
Sbjct: 240 AKKYSQDGSKDKGGDLGTVPVVNSGFDEQFMDSALPLKDGQISDPVKTQFGYHIIKMIKK 299
Query: 276 --RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ +K ++ K +K K+++ NA I Y
Sbjct: 300 DVKPCKTFAEVKNEINKFLLQDKKDKAIKNKFKQIQDNAKIKVY 343
>gi|297585156|ref|YP_003700936.1| SurA domain-containing protein [Bacillus selenitireducens MLS10]
gi|297143613|gb|ADI00371.1| SurA domain protein [Bacillus selenitireducens MLS10]
Length = 272
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 42 IRTTINGEVITDGD-----------ISKRIALLKLQKINGELEKIAVQELIVETLKKQEI 90
+ +NGE I+ + ++ + + + ++ + ++ TL QE
Sbjct: 82 VVAEVNGEEISQEEFLATYEPQFQQMAMQSQMTGEEVDEAQIRDMVADSMVNNTLLIQEA 141
Query: 91 EKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ GI + + A+ + S++ F L++QG ++ + +Q ++
Sbjct: 142 DSQGIEATDEDIEQLLTELAQQNQMESSDQFLQALEEQGTPEDVVMDQVEMQVKVDQLIA 201
Query: 150 NDFMLKYGNLEMEIP 164
N+ + + E+
Sbjct: 202 NEAG-EIDVSDAEVE 215
>gi|259417083|ref|ZP_05741002.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp.
TrichCH4B]
gi|259345989|gb|EEW57803.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Silicibacter sp.
TrichCH4B]
Length = 283
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 99/282 (35%), Gaps = 52/282 (18%)
Query: 39 SSRIRTTINGEVITDGD-ISKRIAL-LKLQKINGELEKIA-VQELIVETLKKQEIEKSGI 95
++ + +NGE IT G+ I R L + Q + +L A + +LI +T+ KQ++
Sbjct: 29 ANTVVAKVNGEEITVGNMIVARAKLPAQYQSLPDDLLFKALLDQLIQQTVLKQQLH---- 84
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
LS E L + ++ + Q+ D +++ + +
Sbjct: 85 -----------GDTPEYVRLSVEHEERSLLASDVIESVMED---AQT--EDAIRDAYDAR 128
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
Y + + E+ +L ++ + + + D
Sbjct: 129 YSSDD-------------GGDEFNASHILLESEEDAVSIKEQLDA------------GAD 163
Query: 216 CNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273
L K +S + G+ + + P+F+ + + + P TQ G I +
Sbjct: 164 FAALAKESSTGPSGPNGGELGWFENGRMVPEFEAAVAEMRPGEVSEPVQTQFGWHIIKLN 223
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
D+R L E + + ++ + + +L ++A I
Sbjct: 224 DRRKL--EAPDYEDVREEIGLELAQQAVEDRINQLTASATID 263
>gi|228988998|ref|ZP_04149028.1| hypothetical protein bthur0001_56200 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228770720|gb|EEM19255.1| hypothetical protein bthur0001_56200 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 299
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 27/209 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-DNHFKQYLAIQSIWPDVVKNDFML 154
++ + G S F+ FL + G+ + K + + + + +
Sbjct: 75 KVSDGEIDDEIKRLKSEFGNS---FNDFLSQNGVNNEEQLKDVIKLD----KLKQKLALE 127
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ A ++ K E + +L ++ + + +
Sbjct: 128 HLKIQDKDLKALYEQKK----PEIRVSHILV-------SDETLAKDIKSKIDS-----GE 171
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271
D L K S+ G Y E D+ FQ+ +K + + P T+ G I
Sbjct: 172 DFGSLAKEFSQDIATKEKGGDIGYFKEGDMVQAFQDAARKLKVGEVSQPVKTEFGYHVIK 231
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ D++ L +K L ++ K+++
Sbjct: 232 LLDEKKLPSFEQMKPQLQSELISNKMDQA 260
>gi|118443543|ref|YP_877117.1| peptidylprolyl isomerase [Clostridium novyi NT]
gi|118133999|gb|ABK61043.1| parvulin-like peptidyl-prolyl isomerase [Clostridium novyi NT]
Length = 348
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/335 (13%), Positives = 103/335 (30%), Gaps = 37/335 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------- 68
+ + + + C ++ A++ + + + IT G++ A+ + ++
Sbjct: 13 VCVFSMSAVGC--SMIEKTPEAINKTVVAKVGDKKITKGELDSNFAVKRYEEQFKAQYGD 70
Query: 69 NGELEKIAVQEL------------IVETLKKQEIEKSGITFDSNTV----NYFFVQHARN 112
++L E LK QE EK G+ + + + +
Sbjct: 71 KYAENPQVKEQLKQVKVATVQQMAAQEALK-QEAEKLGLVPKEAELKKETDKKIQEMKKE 129
Query: 113 TGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
+ S E+F L G F+ + I + +N+ E E+ + K
Sbjct: 130 QNIKSNEEFEKMLKASGFTKEGFESLVRDNIILEKL-QNELTKNVKVDEKEMQKYYETHK 188
Query: 172 NI------TVREYLIRTVLFSIPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFAS 224
+ + + ++ + + + K IK+ K + S
Sbjct: 189 DKYPKDVKNPTKVHLAHIILQPKSQEDLAKCESEIKSIKEELNKGAEFSVLAKKYSQDGS 248
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
K +G + + L + P TQ G I + K +
Sbjct: 249 KEKGGDLGTVPTVDSGFDEQFMEAALPLKDGQISEPVKTQFGYHIIKMIKKEVKPCKTFA 308
Query: 285 KA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ ++ K K + K+++ NA + +
Sbjct: 309 EVKNEINKFLLEEKKGKIIKDKFKQIQDNAKVKVF 343
>gi|282917109|ref|ZP_06324867.1| foldase prsA [Staphylococcus aureus subsp. aureus D139]
gi|282319596|gb|EFB49948.1| foldase prsA [Staphylococcus aureus subsp. aureus D139]
Length = 320
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 82/237 (34%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K ++ + G I D K L + K++K+
Sbjct: 217 EKALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNS---QKQSLKEKLVDQKVQKNPK 270
>gi|300728335|ref|ZP_07061700.1| peptidyl-prolyl cis-trans isomerase family protein [Prevotella
bryantii B14]
gi|299774400|gb|EFI71027.1| peptidyl-prolyl cis-trans isomerase family protein [Prevotella
bryantii B14]
Length = 486
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 79/261 (30%), Gaps = 36/261 (13%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKS 93
+ + E I D+ ++++Q K G+ + ++L ++ L +
Sbjct: 62 DEVIWVVGDEPILKSDVE----MMRMQGEAEGVKFQGDPDCSIPEQLAIQKLFLHQAAID 117
Query: 94 GITFDSNTVNYFFVQ--------HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
I + V+ L E++ +Q +
Sbjct: 118 SIEVTESEVSQGIDDQINYWIQLIGSREKL--EEYRKM------TITQIRQQMHDDFKNQ 169
Query: 146 DVVKND---FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+++ + + ++ A + + ++ + I ++ ++
Sbjct: 170 QLIRKEREELVKDIKVTPAQVRAYFKNLPEDSIPFVPTEVEVQVITRQPKISKDETERIK 229
Query: 203 KDAEESRLRLP---KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQN 255
+ + R+ + L + S+ + G+ Y+ L P F N+
Sbjct: 230 EQLRDFTKRVNDGETSFSTLARLYSEDPGSARQGGELGYIGRGMLDPAFANVAFNLTDPK 289
Query: 256 NTTNPYVTQKGVEYIAICDKR 276
+ T+ G I + DKR
Sbjct: 290 KISKIVETEFGFHIIQLIDKR 310
>gi|323343303|ref|ZP_08083530.1| peptidyl-prolyl cis-trans isomerase [Prevotella oralis ATCC 33269]
gi|323095122|gb|EFZ37696.1| peptidyl-prolyl cis-trans isomerase [Prevotella oralis ATCC 33269]
Length = 478
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 26/256 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKS 93
+ + E I D+ ++LQ K +G+ + I +++ V+ L + E
Sbjct: 52 DEVIWVVGDEPILKSDVEA----MRLQAEAEGVKWSGDPDYIIPEQIAVQKLFLHQAEID 107
Query: 94 GITFDSNTVNYFFVQHARN---TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-- 148
I ++ Q S E + ++ +Q + + +V
Sbjct: 108 SIEVSETEISSGLDQQINRWIQMAGSREKLEEWRNQ---TIAQMRQQMHDEYKNTQLVQK 164
Query: 149 -KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + + ++ + + ++ + I Q V + +
Sbjct: 165 MRQELVKDVKVTPADVRNYFRNLPEDSIPFVPTEVEVEIITKQPKITQEEVNRVKDELRG 224
Query: 208 SRLRLPKD---CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNP 260
R+ K L + S+ + G+ Y L P F ++ +
Sbjct: 225 FTDRVMKGETTFATLARLYSEDPGTARQGGELGYTGRGMLDPAFASVAFNLTDPKKISKI 284
Query: 261 YVTQKGVEYIAICDKR 276
T+ G I + DKR
Sbjct: 285 VETEFGYHIIQLIDKR 300
>gi|115525459|ref|YP_782370.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisA53]
gi|115519406|gb|ABJ07390.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisA53]
Length = 353
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 58/159 (36%), Gaps = 6/159 (3%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
G E++ + + + + R+Y + + + P + ++ K K E+ + +L
Sbjct: 178 GEDEIQKVYDANRGQLVVPRQYQLSQIFIASPKDA--DKATEDKARKKLEDIQKKLKAPG 235
Query: 217 NKLEKFASKIHDVSIG-KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
A + D + E+ L P+ ++ ++ ++ ++P G + + D
Sbjct: 236 ADFAAIAGEESDAKGSADLGSIPENQLIPEIRSHVVGLAKGAVSDPIRLDAGWHIVKLTD 295
Query: 275 KRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ ++ L+ Q + Y+ +L
Sbjct: 296 TKASYTRTLPEVRDQLAQQMRKERAAALRRGYLAELLKQ 334
>gi|296503398|ref|YP_003665098.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
gi|296324450|gb|ADH07378.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
Length = 268
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/291 (16%), Positives = 104/291 (35%), Gaps = 48/291 (16%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
+S + S I TT +G I++ D +K+ LK L ++ V++++ + K
Sbjct: 4 TLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMVVEKVLHDKYK--- 56
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVV 148
V + G ++F+++++ G+ ++ K+ L + + +
Sbjct: 57 -------VTDEEVTKQLKELKDKMG---DNFNTYMESNGVKNEDQLKEKLKLTFAFEKAI 106
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
K E +I K+ + + +L K IK+
Sbjct: 107 KA------TVTEKDI-------KDHYKPKLQVSHILVK--------DEKTAKEIKE---- 141
Query: 209 RLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
+L +D L K S+ G+ + +F++ K + + P +
Sbjct: 142 KLNSGEDFAALAKQYSEDPGSKEKGGELSEFGPGMMVKEFEDAAYKLEVGQLSEPVKSSF 201
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
G I + DK++L K + + +I+ + + + L NA I
Sbjct: 202 GYHIIKLTDKKELKPYEEEKENIRKELEQQRIQDPQFHQQVTRDLLKNADI 252
>gi|327402945|ref|YP_004343783.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis
DSM 16823]
gi|327318453|gb|AEA42945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis
DSM 16823]
Length = 651
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 89/301 (29%), Gaps = 62/301 (20%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++ + + S + A + + I+G+ +T + L++ N K L
Sbjct: 5 LVLALGILFSLNTIAQTDNVVMEIDGKKVTKSE------FLQIYLKNNNDPKYDKVSL-D 57
Query: 83 E--------TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
E LK E E G + L +
Sbjct: 58 EYMGLFKKFKLKVAEAEALGYD-------------------TIPKLKKELAG-------Y 91
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ L +++ + ++MKN E +L + +N
Sbjct: 92 RKQL----------SQPYLIDSTKNSALVAQAYERMKN----EVHAAHILVKVVENASPE 137
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS----IGKAQYLLESDLHPQFQNLL 250
A + R+ +D + K + D S G Y + QF+
Sbjct: 138 DTLAAYNRILAIKKRIENGEDFATVAKGKNGSDDPSAARNGGDLGYFTAFQMVYQFEEAA 197
Query: 251 KKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL--SAQNTPTKIEKHEAEYVKK 307
+Q +NP T+ G + + D R G + + + ++ + + V +
Sbjct: 198 YMTQVGKISNPIRTKFGYHILKVIDIRPARGTMKAAHIMVATGKDAGQEELDDARKKVDE 257
Query: 308 L 308
+
Sbjct: 258 I 258
>gi|332300230|ref|YP_004442151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Porphyromonas
asaccharolytica DSM 20707]
gi|332177293|gb|AEE12983.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Porphyromonas
asaccharolytica DSM 20707]
Length = 472
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 94/264 (35%), Gaps = 12/264 (4%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVE 83
P + ++ + T+ E I +I + ++ Q + G + ++L V+
Sbjct: 30 AQTPQQKTSAGSVVDEVIWTVGDEPILKSEIENQKLYMRSQGMPLEGNPDCYLTEQLAVQ 89
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L + + I+ D+ V+ F + + + ++ I ++
Sbjct: 90 MLFLNQAKIDSISVDNTKVDRFVDNFMESLVQQIGSRERLEEYFNRPYSSIREQQRIMAV 149
Query: 144 WPDVVK---NDFMLKYGNLEMEIP---ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
++V+ + EI A + + + + L PD +L
Sbjct: 150 NNEIVRQMQQKIIQGVAVTPTEIRSYYAQIPQDSLPYIPDVVEVQALRITPDIELAAIDQ 209
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQNLLKKSQ- 254
++++++ + + +D + + + S+ S+ + ++ S L P+F ++
Sbjct: 210 IKEQLRSYSDDIVAGRRDFSTIARLYSQDSRTSLRGGEYGFVARSSLEPEFAQVVFALSD 269
Query: 255 -NNTTNPYVTQKGVEYIAICDKRD 277
+ T G + + +KRD
Sbjct: 270 TKQVSPIIRTATGYHIVQLIEKRD 293
>gi|2765458|emb|CAA75544.1| NifM protein [Pseudomonas aeruginosa PAO1]
Length = 250
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 70/179 (39%), Gaps = 9/179 (5%)
Query: 148 VKNDFMLKYGNLEMEIPA-----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
++ + E + A + + +R VL + + L+ + +K+
Sbjct: 61 IRQLLEEEVQVPEADEDACRTWYAANPGRLLGPWRLQLRHVLLACAPDDLEGRETARKQA 120
Query: 203 KDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
+ +E R + + +F++ S G ++ P+F+ LL+++ +P
Sbjct: 121 AELLDELRGHPERFVDLARRFSACPSKESGGDLGWIEPGQTVPEFEKRLLRRAPGLLEHP 180
Query: 261 YVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
++ G+ + + + + A +A ++A +++ +Y+ L +A I +
Sbjct: 181 LESRYGLHVVELLAREGGEPLDFDAARAQIAAHLQAQVLQRAVGQYIGVLAGDACIEGF 239
>gi|315644371|ref|ZP_07897511.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex
V453]
gi|315280248|gb|EFU43540.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus vortex
V453]
Length = 361
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 91/262 (34%), Gaps = 36/262 (13%)
Query: 40 SRIRTTINGEVITD--GDISKRI---------ALLKLQKINGELEKI--AVQELI---VE 83
S++ G IT+ D+ +R+ L++ + L K A + L +
Sbjct: 41 SKVIVKYKGGEITEKEFDLEQRMIQFMSPEYAQFLQMDEFKEYLAKQGVAYEYLYAKADD 100
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL-AIQS 142
K + Q + G+ + F + L+ Q + + K Y+ + +
Sbjct: 101 KAK---------EAAEKQADDLLKQ--QKNGMGEDQFKAALETQKLTEQDLKNYMLRVLT 149
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + +++ + ANK+ NI+VR L+ F + K + +G K
Sbjct: 150 VMEHEKN---QVSEEDIKKDFDANKKDYTNISVRHVLVS---FKDAEGKDRPEGEALKIA 203
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-DLHPQFQ-NLLKKSQNNTTNP 260
K+ E + ++++ G + PQF+ L N + P
Sbjct: 204 KEVENKLNKGEDFAAVAKEYSQDPASKDKGGLIENKPAGSWVPQFKEKALTLELNKISAP 263
Query: 261 YVTQKGVEYIAICDKRDLGGEI 282
T G + + + ++ +
Sbjct: 264 VETDYGYHVMKVEKREEVAYDK 285
>gi|315607432|ref|ZP_07882428.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574]
gi|315250864|gb|EFU30857.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574]
Length = 474
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 89/270 (32%), Gaps = 48/270 (17%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ T +L+ + ++Y A + + T+NG ++ + G ++K
Sbjct: 1 MKTATLLVAMLLCGSMAY---AQNDPVVMTVNGAPVSRSEFEYSYN---KNNSEGVIDKK 54
Query: 76 AVQELIV----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
V E + LK Q + LD
Sbjct: 55 TVGEYVDLFVNYKLKVQAA-----------------------------LDARLDTMSSFK 85
Query: 132 NHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
F++Y Q + P +V D K ++ E + +L + N
Sbjct: 86 KEFREY-RDQQVRPTLVTDADVEAKARDIYRETQQRVDGGGGLLKT----SHILLLLDQN 140
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQN 248
+ Q K D+ + L+ D L + S K V+ G+ ++ + L +++
Sbjct: 141 ATKTQQNAAKVRIDSVYNALKKGADFADLARRLSDDKSSAVNGGQLPWIERNQLVKAYED 200
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + P++++ G + + DK+
Sbjct: 201 VAYALKKGEISKPFLSEYGYHVVKLDDKQP 230
>gi|117921098|ref|YP_870290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
ANA-3]
gi|117613430|gb|ABK48884.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
ANA-3]
Length = 621
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 51/169 (30%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + S +NG+ IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKGILVLVILSFAFAGVSSY-LGSKSDVPAAEVNGDKITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + + +++ ++ L+ + L Q G+ +
Sbjct: 60 QSERARMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAAAAMGLRVSDEQIIT 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + L + G F+ + + +
Sbjct: 120 AIKSEPAFQTDGKFDNDRYQAILRQLGYQPQTFRSMMRVDMTRRQLTAA 168
>gi|261346360|ref|ZP_05974004.1| peptidyl-prolyl cis-trans isomerase D [Providencia rustigianii DSM
4541]
gi|282565674|gb|EFB71209.1| peptidyl-prolyl cis-trans isomerase D [Providencia rustigianii DSM
4541]
Length = 622
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 75/222 (33%), Gaps = 26/222 (11%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLK 64
S FIK+L +L ++ V+ SS +NG+ I+ + + R +L +
Sbjct: 11 SPFIKVLLAIIILSF--VLTGVAGYVIGGSSNDAAEVNGQPISREQLQQAFQQERQSLQE 68
Query: 65 LQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHA 110
EL A+ LI L Q + ++ +
Sbjct: 69 YLGDKFAEVASNDEYMKELRTQALNNLINTQLINQYANELNLSASDKQIEQAIFAMQIFQ 128
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ +E + L + I + F + D+V+ + E +P+ +
Sbjct: 129 TDGKFDSEKYREILSRYNINADSFAAQIR-----QDLVRAQLGKSFTGTEFALPSEVKAY 183
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ +++ +RT + + + + + ++ + ++
Sbjct: 184 AELFMQQREVRTAMLPLAEVQAKQTVTEEELKAYYDANQNSF 225
>gi|228915458|ref|ZP_04079047.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228844105|gb|EEM89165.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 280
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKIVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G ++F+++++ G+ ++ K
Sbjct: 59 VEKVLNDKYK----------ATDEEVTKQIKELKTKMG---DNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K E EI K+ + +L
Sbjct: 106 EKLKLTFAFEKAIKA------TVTEKEI-------KDHYKPKLQASHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G + +F++ K
Sbjct: 145 EKTAKEIKE----KLNNGEDFAALAKQYSEDPGSKEKGGDLSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + K++L K + + +I+ + + + +
Sbjct: 201 EVGQVSEPIKSSFGYHIIKLTGKKELKPYEEEKVNIRKELEQQRIQDPQFHQQVTRDILK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|312868729|ref|ZP_07728921.1| putative foldase protein PrsA [Lactobacillus oris PB013-T2-3]
gi|311095715|gb|EFQ53967.1| putative foldase protein PrsA [Lactobacillus oris PB013-T2-3]
Length = 318
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 84/254 (33%), Gaps = 29/254 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T +G IT + + K +Q++I
Sbjct: 6 LIAVIAGAALMLPLAACGNKAVATTSGGKITQSEYYSSMK-------ATSNGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + ++E G VN + + G FSSFL + G+ + KQ L
Sbjct: 59 LDKVLEKE---YGKQVSDKQVNAQYNSYKSQYG---SQFSSFLQQNGMTEKSLKQQLRSN 112
Query: 142 SIWPDVVKNDFMLKYGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ V++ + + + Q + + + + ++ + ++ + + F
Sbjct: 113 LLLEAAVRDYSHITNKQINAQWKKYQPKVQTAEILVGSKNDAQDIIDQLNNSSDKYKTFK 172
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ + ++ + D + +A + L K+ TT
Sbjct: 173 KLAKSKSTDTSNKDNGGRVPAFDNTDNSLDSAYKEAAFKL-------------KTGEYTT 219
Query: 259 NPYVTQKGVEYIAI 272
P T G + I +
Sbjct: 220 TPVKTDDGYQVIYM 233
>gi|322379924|ref|ZP_08054201.1| peptidyl-prolyl cis-trans isomerase [Helicobacter suis HS5]
gi|321147622|gb|EFX42245.1| peptidyl-prolyl cis-trans isomerase [Helicobacter suis HS5]
Length = 318
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 46/276 (16%)
Query: 51 ITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
IT+ D I +R K+ E +K +++ I L ++E +K +
Sbjct: 72 ITENDFDVIKQRNPNFDFNKLKPEQKKALLEQAINNLLIEREAKKEKLDDT--------A 123
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ A+ +K+ L ++ W + + + K E ++
Sbjct: 124 EFAKRM------------------AGYKKQLLVEI-WAKH-QAEAIGKEDIPEDQLRKYY 163
Query: 168 QKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Q K +E R +L + + + K + R+ K+ + S
Sbjct: 164 QDNKTQFVQQEAKARHILVKTEADAKRVISELNK------TPKTRIEKEFIDIANRESID 217
Query: 227 HDV----SIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGG 280
+ + G ++ + P+F N + + T P T+ G I + K +
Sbjct: 218 PNTKNSKNGGDLGKFQKNQMAPEFSNAVFALKPGSYTKTPVKTEFGYHVIYLMSKNEPKT 277
Query: 281 EI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + + +++ ++KLR N I
Sbjct: 278 PTFEQARQTIIGILKEHQFQEYVKGELEKLRKNVRI 313
>gi|156973716|ref|YP_001444623.1| peptidyl-prolyl cis-trans isomerse [Vibrio harveyi ATCC BAA-1116]
gi|156525310|gb|ABU70396.1| hypothetical protein VIBHAR_01421 [Vibrio harveyi ATCC BAA-1116]
Length = 619
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/314 (10%), Positives = 84/314 (26%), Gaps = 74/314 (23%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q+ E G+ V Q N E + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDAQVRSMILDMPQFQSNGKFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFML---------------------KYGNLEMEIPANKQ 168
+ F +Y+ + + ++ + +++ A K
Sbjct: 148 SPDSFAEYMRRELVREQLLNALQTSEFTLPGEVQSEGKLFTQTRDVRTITIDLNEFAKKV 207
Query: 169 KMKNITVREY-------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--------- 212
+ + +++Y R + +L ++ E+ +
Sbjct: 208 DLTDEEIQDYYKANPEMFTRPEQVKVAYIELSADELKKQIQISDEDVKKYYDEHLDKYST 267
Query: 213 ------------PKDCNKLEKFASKIHDVS------------------IGKAQYLLESDL 242
D K + +++ + G ++ +
Sbjct: 268 EEQRRVAHILVEGDDEAKAQAILDELNGGADFAKLAEEKSNDFGSAENGGDLGWIERDVM 327
Query: 243 HPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIE 298
P F+ K+ + T + G I + + + + + A + + K
Sbjct: 328 DPAFEEAAFALKNPGDITGLVKSDFGYHIIKLEELKGAVAKPFSEVAAEIKQEMVDQKAV 387
Query: 299 KHEAEYVKKLRSNA 312
E +L A
Sbjct: 388 DQFYELQNELEKVA 401
>gi|312961785|ref|ZP_07776283.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens WH6]
gi|311284044|gb|EFQ62627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens WH6]
Length = 624
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 56/392 (14%), Positives = 117/392 (29%), Gaps = 97/392 (24%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI----RTTINGEVITDGDISKRIALLKLQKINGE 71
+ + II ++ ++ +S +NGE IT ++S+ + + + Q +
Sbjct: 13 IAKTIIGIIVALMAFTGIEAIFQASGTNKQDVAKVNGEAITQPELSQAVDMQRRQLMQQL 72
Query: 72 -------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF------------- 105
L A++ LI L Q S F ++
Sbjct: 73 GKDFDASLLDEKLLRDAALKGLIDRKLLLQGAADSKFGFSEAALDQVILQTPEFQVDGKF 132
Query: 106 ----FVQHARNTGLSAEDFSSFLDK--------QGIG----------------------- 130
F Q R G S F L + GI
Sbjct: 133 NAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTDAEVLAFARLEKQTRDF 192
Query: 131 -----------------------DNHFKQYLAIQSI---WPDVVKNDFMLKYGNLEMEIP 164
D H K+++ + + ++ K+ F + + E+
Sbjct: 193 ATVNLKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLELKKSSFFDQVTVKDDELQ 252
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A +K + +L + N + + +I++ + + K ++F+
Sbjct: 253 AAYEKETANLAEQRRAAHILIEV--NDKVTEAQAKAKIEEIQARLAKGEKFDALAKEFSQ 310
Query: 225 KIHDVS-IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR--DLGG 280
+ G + P F+ L Q+ + P + G I + ++
Sbjct: 311 DPGSANNGGDLGFAGPGVYDPDFETALYALKQDQVSAPVRSTFGWHLIKLLGVEAPEVPT 370
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+LK L+ + ++E+ E K+L A
Sbjct: 371 FASLKDKLTRELKAQQVEQRFVEATKQLEDAA 402
>gi|300813778|ref|ZP_07094088.1| peptidylprolyl isomerase PrsA3 family protein [Peptoniphilus sp.
oral taxon 836 str. F0141]
gi|300512121|gb|EFK39311.1| peptidylprolyl isomerase PrsA3 family protein [Peptoniphilus sp.
oral taxon 836 str. F0141]
Length = 249
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 89/283 (31%), Gaps = 47/283 (16%)
Query: 41 RIRTTINGEVITDGD----ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+I +NG+ IT D I+ L+ +N + K ++ELI L Q+ ++G
Sbjct: 5 KILAEVNGKKITGEDYNIFINSINPKLREHLVNSDQNKEVIEELIHHELIYQDAIENG-- 62
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
E+F LD+ K+ L + + +
Sbjct: 63 -KDKE----------------EEFQKVLDQA-------KKSLLLNYTLGKL-----LSNI 93
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E EI K ++ +R + D K + + A+ S+
Sbjct: 94 EVTEKEIEDFYNNHKEHFTKDQTVRASHILVDDLKKAEE-IYNRIKDGADFSKEAKNNST 152
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
++ + G + +F++ + P TQ G I + +K
Sbjct: 153 CPSKE--------NGGDLGIFSRGQMVKEFEDACFNMEVGEVSKPVKTQFGYHIIKLVEK 204
Query: 276 RDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ ++ K ++ + + LR + I Y
Sbjct: 205 NKAQEMTLEESRDHIIEDIRRQKEQEIYKDKISSLREKSQIKY 247
>gi|66044996|ref|YP_234837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae B728a]
gi|63255703|gb|AAY36799.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae B728a]
Length = 627
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 57/402 (14%), Positives = 115/402 (28%), Gaps = 103/402 (25%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAADARFSFSDAALD 120
Query: 104 YF-----------------FVQHARNTGLSAEDFSSFLDK--------QGIG-------- 130
F Q R G S F L + G+
Sbjct: 121 QQLLQTPEFQVDGKFNADRFDQVIRQLGYSRLQFRQMLGQEMLIGQVRAGVAGSAFVTDA 180
Query: 131 --------------------------------------DNHFKQYLAIQSIWPDVV---K 149
D H K++++ + + D + K
Sbjct: 181 QVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIELKK 240
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ F K + ++ A QK + +L + N N + +I++ ++ R
Sbjct: 241 SSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-R 297
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
L +D L K S+ S G Y + P F+ L +++ + P T G
Sbjct: 298 LAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRTDFG 357
Query: 267 VEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
I + L +Q K +
Sbjct: 358 WHLIKLLGVEAPSVPSFASLKGKLTNDLKSQLVEQKFVEVTK 399
>gi|304439703|ref|ZP_07399603.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371809|gb|EFM25415.1| peptidyl-prolyl cis-trans isomerase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 261
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 85/286 (29%), Gaps = 57/286 (19%)
Query: 38 MSSRIRTTINGEVITDGDIS---------KRIALLKLQKINGELEKIAVQELIVETLKKQ 88
M+ I +N IT+ D++ R+ + V ELI + +
Sbjct: 11 MNKEILAKVNDREITNEDLNIFLSQLDPNTRMYF-----TQNNMMDQVVDELIYQEMIYM 65
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E + G+ D + V ++ + T L + L+ I D K Y
Sbjct: 66 EAIEKGMDKDEDFVK--VLEKTKETLLKSYALGKLLETVEITDEDLKNY----------- 112
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+K KN E +L V K IK+ +
Sbjct: 113 --------------YDNHKDNFKNNASVE--ASHILV--------EDESVAKEIKEKLNN 148
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGV 267
+++++ + G + + +F++ ++P TQ G
Sbjct: 149 GADFK---ELAKEYSNCPSKENGGNLGVFTKGQMVKEFEDAAFNMGVGEISDPVKTQFGY 205
Query: 268 EYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSN 311
I + +K D +A + K + V++L
Sbjct: 206 HIIKVTNKNDESVRTFEEAKPDIERLVRREKEKDLYKHTVERLYKK 251
>gi|289627508|ref|ZP_06460462.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649941|ref|ZP_06481284.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330868371|gb|EGH03080.1| periplasmic folding chaperone [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 627
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F++ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSSKGGDLGYAGKGVYDPAFEDSLYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKDKLTTDLKSQLVEQKFVEVTK 399
>gi|330878776|gb|EGH12925.1| periplasmic folding chaperone [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 627
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 93/274 (33%), Gaps = 29/274 (10%)
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT----FDSNTVNYFFVQHARNTGLS 116
++ + G Q L E L Q ++G+ V+ F + + T
Sbjct: 139 RFDQVIRQLGYSRMQFRQMLGQEMLIGQV--RAGVAGSAFVTDAQVD-AFARLEKQTR-D 194
Query: 117 AEDFSSFLDKQGIGD----------NHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEI 163
+ D + H K++++ + + D + K+ F K + ++
Sbjct: 195 FASLTQPADPSAVKVTDDEVKAHYDQHAKEFMSPEQVVLDYIELKKSSFFDKVTVKDEDL 254
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
A QK + +L + N N + ++++ ++ RL + L K
Sbjct: 255 QAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKVEEIQQ-RLAKGESFAALAKEF 311
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ S G + + P F+ L +++ + P T G I +
Sbjct: 312 SQDPGSSSKGGDLGFAGKGVYDPAFEEALYALNKDQVSQPVRTDFGWHLIKLLGVEAPSV 371
Query: 281 EI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+LK LS +E+ E K+L +A
Sbjct: 372 PTFASLKEKLSNDLKSQLVEQKFVEVTKQLEDSA 405
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 21/193 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE IT ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120
Query: 104 YFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+Q + SA+ F + + G F+Q L + + V+ +
Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQFRQMLGQEMLIGQ-VRAGVAGSAFVTD 179
Query: 161 MEIPANKQKMKNI 173
++ A + K
Sbjct: 180 AQVDAFARLEKQT 192
>gi|308172978|ref|YP_003919683.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens DSM 7]
gi|307605842|emb|CBI42213.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens DSM 7]
Length = 285
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 84/251 (33%), Gaps = 34/251 (13%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ + +L+ E + +K ++ ++ G + +S+ +
Sbjct: 44 NMKKTAGASVLTQLVQEKV---LAKKY--KVSDKEIDNKLKEYKTQLG---DQYSALKQQ 95
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
G +++ K + + + K++ + + + K K++ +L
Sbjct: 96 YG--EDYLKDQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRA--------SHIL-- 143
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ D K ++ + + + + + +SK + G + + + F
Sbjct: 144 VADKKTADEVEKKLKKGE------KFETLAKEYSTDSSKDNG---GDLGWFDKKSMDETF 194
Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--E 303
+ ++P T+ G I ++R + +K L + K+ + A
Sbjct: 195 SKAAFGLKVGQVSDPVKTKFGYHIIKKTEERGKYDD--MKKELKEEVLKQKLNDNSAVQA 252
Query: 304 YVKKLRSNAII 314
++K+ A +
Sbjct: 253 AIQKVMKKADV 263
>gi|128297|sp|P23119|NIFM_AZOCH RecName: Full=Protein nifM
gi|142394|gb|AAA22166.1| nifM [Azotobacter chroococcum]
Length = 293
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 87/232 (37%), Gaps = 11/232 (4%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--N 150
+G+ ++ + + Q A SAE LD QG+ + LA + V+
Sbjct: 59 AGVVIPASQIEEAWTQIANRYE-SAEALQQALDAQGLERVGMRAMLARELKVQAVLDCIC 117
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EES 208
+ + + ++ + + + R +L +I ++ +N + +A +
Sbjct: 118 AGLPEISDTDVSLYYFNHAEQFKVPARHKARHILVTINEDFPENTREAARTRIEAILKRL 177
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGV 267
R + + + K + + G ++ L+P+ L + +Q + + G
Sbjct: 178 RGKPERFAEQAAKHSECPTAMQGGLLGEVVPGTLYPELDACLFQMAQGQLSPVLESPIGF 237
Query: 268 EYI---AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK-LRSNAIIH 315
+ ++ R L E L L + + + ++ ++++ L+ NA +
Sbjct: 238 HVLFCESVSTARQLTLEEILPR-LRDRLQLRQRKAYQRKWLESLLQQNATLE 288
>gi|157825956|ref|YP_001493676.1| protein export protein prsA precursor [Rickettsia akari str.
Hartford]
gi|157799914|gb|ABV75168.1| protein export protein prsA precursor [Rickettsia akari str.
Hartford]
Length = 282
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 94/294 (31%), Gaps = 30/294 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +IF V ++S +A ++ T G + + I +K K L+ +
Sbjct: 4 LSVIFLSVSMLSGIVFADQDKVVATYKGGEVKESQI------MKEFKPQLNLQSGETIKN 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + + + I ++ + + A++ S+++F L+
Sbjct: 58 FDDFPPQDQEKLIKIYVNNLLLK---AEVAKSNITSSKEFQEKLENA-----------KN 103
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q +++ N + + NK + + +L ++ + K
Sbjct: 104 QLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---SQKEANDIKTK 160
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTN 259
K ++L +K S + IG L P+F+ N +
Sbjct: 161 LSKGGNFTKLAEELSLDKA----SASNGGVIGYIILNQPGQLVPEFENKAFALKVNEVSI 216
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L S A
Sbjct: 217 PVKTTFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEVLKKYISDLESKAD 268
>gi|310820639|ref|YP_003952997.1| peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1]
gi|309393711|gb|ADO71170.1| Peptidylprolyl cis-trans isomerase [Stigmatella aurantiaca DW4/3-1]
Length = 519
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 77/277 (27%), Gaps = 55/277 (19%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFL 124
L + +L+ L Q E+ GI + + ++ + E + L
Sbjct: 78 ARQSLPSQVMDQLVTRELLSQAAERHGINPSDDELRKLIHENADFHKDGQFNFEQYKRAL 137
Query: 125 DK-----QGIGDNHFKQYLAIQ----------SIWPDVVKNDFMLKYGNLEMEIPA---- 165
+ + ++ LA Q + D V+ + ++
Sbjct: 138 RDYYRTTEPKYEEELRRQLAAQKMLQVVNSGAVVSDDEVRARYEKDANQAKVVFARFLPT 197
Query: 166 ---------------NKQKMKNITVREY--------------LIRTVLFSIPDNKLQNQG 196
+K N + Y R +L + + Q
Sbjct: 198 MYAAQVPAPTPAQLEEFRKAHNDEISTYYESNRFMYQQAERAKARQILVKLAPDAAAQQK 257
Query: 197 FVQKRIKDAEESRLR-LPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQN-LLKK 252
K +A + KD + + S+ S G ++ + L P +
Sbjct: 258 AEAKSRAEALHKEVTEGGKDFATVARERSEDPGTKASGGDLGWVERASLEPTLAEAVFAL 317
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ N + P T+ G + + +K+ + +A
Sbjct: 318 APNGVSQPIETKLGWHVVKVEEKQAAQDKKLEEAAPE 354
>gi|228470588|ref|ZP_04055445.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas
uenonis 60-3]
gi|228307715|gb|EEK16691.1| peptidyl-prolyl cis-trans isomerase family protein [Porphyromonas
uenonis 60-3]
Length = 472
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 81/251 (32%), Gaps = 14/251 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ T+ E I +I + ++ Q + G + ++L V+ L + + I+
Sbjct: 44 DEVIWTVGDEPILKSEIENQKLYMRSQGMHLEGNPDCYLTEQLAVQMLFLNQAKIDSISV 103
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM---- 153
D+ V+ F + + + ++ ++ ++V+
Sbjct: 104 DNTKVDRFVDNFMESLVQQVGSRERLEEYFNRPYSSIREQQRTMAVNNEIVRQMQQKIIQ 163
Query: 154 ---LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + Q ++ + + ++ +E+ R
Sbjct: 164 GVTVTPSEIRSYYAQIPQDSLPYIPDAVEVQVLRITPEIELAAIDKIKEQLRGYSEDIRA 223
Query: 211 RLPKDCNKLEKFASKIH--DVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKG 266
+D + + + S+ V G+ ++ S L P+F ++ + T G
Sbjct: 224 -GQRDFSTIARLYSQDSRTSVRGGEYGFVARSSLEPEFAQVVFALSDTKQVSPIIRTATG 282
Query: 267 VEYIAICDKRD 277
+ + +KRD
Sbjct: 283 YHIVQLIEKRD 293
>gi|90410786|ref|ZP_01218801.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium
profundum 3TCK]
gi|90328417|gb|EAS44715.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium
profundum 3TCK]
Length = 623
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 65/189 (34%), Gaps = 28/189 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIA------LLKLQ 66
F + + ++ S +++I NG I+ + + R+ L
Sbjct: 23 FSFVFAGVGSYLAGGSQPAAAKI----NGTEISQNEFEQAYQNERNRMQSQLGDYFSTLL 78
Query: 67 KING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDF 120
+ + + +I + L +Q + G+ + + R+ + +
Sbjct: 79 GDPEYVKQFRQSVLDRMINDVLIEQRATELGLRISDEHIRKTITSMPEFQRDGKFDNDSY 138
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ L + G + F +Y+ + + F+ + + + ++ + ++ ++
Sbjct: 139 TMLLRRSGFTPDQFAEYMRTDML-----RTQFLTAIQGSDFALDSELTALRKLEAQQRVV 193
Query: 181 RTVLFSIPD 189
R++ + D
Sbjct: 194 RSLTLDLAD 202
>gi|104781017|ref|YP_607515.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas entomophila L48]
gi|95110004|emb|CAK14709.1| putative peptidyl-prolyl cis-trans isomerase D [Pseudomonas
entomophila L48]
Length = 619
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 82/223 (36%), Gaps = 29/223 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V + QHA+ ++ + Y+ ++ K+ F
Sbjct: 203 VKVSDEEVKAHYDQHAKEF-MTPDQVVI-------------DYI-------ELKKSAFFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + E+ A +K + +L + N + RI++ ++ RL +
Sbjct: 242 QVKVNDDELKALYEKEIANLGEQRHAAHILIEV--NDKTTDAQAKARIEEIQQ-RLEKGE 298
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D KL K S+ + G + P F++ L K +++ + P TQ G +
Sbjct: 299 DFAKLAKAFSQDPGSANAGGDLGFAGPGVYDPTFEDALYKLNKDQVSAPVRTQFGYHLVK 358
Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + D+ +LK L+ + ++E+ E K+L A
Sbjct: 359 LLGVQAPDVPSFASLKDKLTRELKTQQVEQRFVEATKQLEDAA 401
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 70/189 (37%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAV 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q E + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDEKMLREAALKGLIDRKLLLQGAEDAKFAFSEAALDQLIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + SAE F S + + G G F++ LA + + + + + ++
Sbjct: 121 QTPEFQVDGKFSAERFDSVIRQMGYGRMQFREMLAQEMLIGQL-RTGLAGSSFVTDKQVE 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|312142755|ref|YP_003994201.1| peptidil-prolyl cis-trans isomerase [Halanaerobium sp.
'sapolanicus']
gi|311903406|gb|ADQ13847.1| peptidil-prolyl cis-trans isomerase [Halanaerobium sp.
'sapolanicus']
Length = 251
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 26/121 (21%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIA---------------------VQEL 80
I +NGE ITD +++++ + +L + ++++ + L
Sbjct: 45 IVAEVNGEEITDQELAQQANVNQLLQEIAQIDQQLAQVLVDSESGNEVLDEFQKLKLDAL 104
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFF----VQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
I L Q+ E+ GI V+ + + LS EDF + L+ QG + +K
Sbjct: 105 IDNVLLSQQAEELGIELTDEEVDEIYQAQKESIKQQNDLSEEDFLAVLENQGFESEEEYK 164
Query: 136 Q 136
Q
Sbjct: 165 Q 165
>gi|224025969|ref|ZP_03644335.1| hypothetical protein BACCOPRO_02720 [Bacteroides coprophilus DSM
18228]
gi|224019205|gb|EEF77203.1| hypothetical protein BACCOPRO_02720 [Bacteroides coprophilus DSM
18228]
Length = 457
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 86/271 (31%), Gaps = 15/271 (5%)
Query: 40 SRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + E I D+ + A + ++ +G+ + +EL ++ L + E +T
Sbjct: 30 DEVVWVVGDEAILKSDVEDERLQAQYEGRRFDGDPYCVIPEELAIQKLYLHQAEIDSVTV 89
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK---NDFML 154
V + + ++ L +V+ +
Sbjct: 90 SEQAVLQEVETYTAWLIEQIGTKEKMEEYYNKTSTQIREMLRENMRNKQIVQEMQRKIVG 149
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E+ K+ ++ L + + I + ++ + E R+ K
Sbjct: 150 DIKLTPAEVRNYFSKLPADSIPYILPQVEVQIITLEPKVTEEEKERIKSELREFTDRINK 209
Query: 215 D---CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGV 267
+ L + S+ + G+ ++ L P+F N++ + + T+ G
Sbjct: 210 GETTFSTLARMYSEDPGSARQGGEYGFMGRGQLVPEFANVVFNLTDTKKISKVFETEFGF 269
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ +KR G+ ++ + + E
Sbjct: 270 HIAQLIEKR---GDRVSYRHILLKPRIDQKE 297
>gi|170727449|ref|YP_001761475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi
ATCC 51908]
gi|169812796|gb|ACA87380.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella woodyi
ATCC 51908]
Length = 619
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEAA-AATVNGEEISESALEQAY 59
Query: 59 ---RIALLKLQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R L + +++ ++ L+ E L Q + G+ +
Sbjct: 60 QSERARLEQQLGEMFEALAADDSYLASVKQSVLERLVAEKLLDQSATELGLRVSDEQIRT 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLE 160
+ + + + + L + G N F+ + +V + + E
Sbjct: 120 AIMTEPAFQTDGKFDNDRYQAILRQLGYQANSFRDMMRTDMTRRQLVASLVGSEFVLPSE 179
Query: 161 MEIPANKQKM 170
+ A Q
Sbjct: 180 ADYLAGIQGQ 189
>gi|158421935|ref|YP_001523227.1| PpiC-type peptidyl-prolyl cis-trans isomerase precursor
[Azorhizobium caulinodans ORS 571]
gi|158328824|dbj|BAF86309.1| PpiC-type peptidyl-prolyl cis-trans isomerase precursor
[Azorhizobium caulinodans ORS 571]
Length = 314
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 84/281 (29%), Gaps = 48/281 (17%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKI-AVQELIVETLKKQEIEKSGI 95
S + T+NG I +++ + L ++ G + + L TL Q + +
Sbjct: 49 SDPVVETVNGAPIRASELAIAEDDIGPGLPQVQGAARQEYILSFLTDMTLLAQAAQAQKL 108
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ A YL +++ ++ +
Sbjct: 109 DQSP--------EFAAKMN----------------------YLRTKALMETLMAAEAKKA 138
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
++ + E R +L + + A+ ++
Sbjct: 139 VTEDAKRKTYDEFVKQTKPETEVHARHILVDSEAKAKEIAAKAKAGADFAKLAKENSKDS 198
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
G Y + + P+F + K + ++P TQ G I + D
Sbjct: 199 AED------------GGDLGYFTKDQMVPEFADAAFKLDKGQVSDPVKTQFGWHVIKVED 246
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
KR I +S Q I K +++ V KLRS+A +
Sbjct: 247 KRQKP--IPTYEQVSDQIDQYLIRKAQSDLVTKLRSDAKVE 285
>gi|311106582|ref|YP_003979435.1| peptidyl-prolyl cis-trans isomerase [Achromobacter xylosoxidans A8]
gi|310761271|gb|ADP16720.1| peptidyl-prolyl cis-trans isomerase [Achromobacter xylosoxidans A8]
Length = 653
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 23/222 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKI 68
+++ + ++ F +V I Y S+ + T+NG+ +T + D + R L + ++
Sbjct: 10 RWMQFILLLLIVPSFFLVGIQGYDSFMRAEPELATVNGQPVTRAEFDQAHRNQLEQFRQR 69
Query: 69 NG-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTG 114
G L + + +LI + L + + T+ + N
Sbjct: 70 LGAQFDPAVIDTPALREGLLNQLINQRLLANVAVDNRFSVSDETLRNTIAAIPEVQDNGR 129
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
S E + L QG+ F+ L D+ + G ++
Sbjct: 130 FSPERYRQVLAAQGMSPTSFEAGLR-----RDLAVARVLEPVGQSARAPGEVVAALETAL 184
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPK 214
++ ++ F+ D + Q DA + +L++P+
Sbjct: 185 TQQRTVQLRRFAAADFRSQVSATPADIQAWYDANKQQLQIPE 226
>gi|163751873|ref|ZP_02159087.1| peptidyl-prolyl cis-trans isomerase D [Shewanella benthica KT99]
gi|161328223|gb|EDP99387.1| peptidyl-prolyl cis-trans isomerase D [Shewanella benthica KT99]
Length = 621
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 20/174 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + I V+ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREASQGVIAKSILVLVIFSFAFSGVSSYLGSSTEAA-AATVNGEEISESALEQAY 59
Query: 59 ---RIALLKLQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTV-N 103
R L + +++ ++ L+ E L Q + G+ + N
Sbjct: 60 QSERARLEQQLGEMFQALAADDTYLASVKQSVLERLVAEKLLDQSATELGLRVSDQQIKN 119
Query: 104 YFFVQHARNTGLSA--EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ A T + + + L + G N F+ + +V + +
Sbjct: 120 AIMTEPAFQTDGQFDNDRYLAILRQLGYQANTFRNMMRTDMTRRQLVASLVGSE 173
>gi|327441514|dbj|BAK17879.1| parvulin-like peptidyl-prolyl isomerase [Solibacillus silvestris
StLB046]
Length = 287
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 84/297 (28%), Gaps = 46/297 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
++ I + + I T IT +++ + L + V
Sbjct: 5 LIGITMTASFLMAACGNTDNEIVATTAYGDITKSGFYEQMKEI----AGTTLLEQVV--- 57
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + L Q + + + E F S L G + FK +
Sbjct: 58 IDKILTDQY------EVSDKEIEEQLETYIE---MYGESFESALATNGYTEETFKDTIRF 108
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q + K + + E R +L + Q + +
Sbjct: 109 QLL---------QQKAMEDVEVTEEEIETYYDQGKYELHTRHILVETEEEAQQLYEQISE 159
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
D E +D E + G +L SD+ F + + +
Sbjct: 160 -GSDFETIAKESSQDSETAE---------NGGNLGWLSISDMETTFADAAYALETGEVSE 209
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT---------PTKIEKHEAEYVKK 307
P + G E I + DKR++ + AL + T+ E EA +K+
Sbjct: 210 PVESTLGFEIIQLVDKREVK-DYALLEEQKEEIKKTLRERIVANTEWETVEARLLKE 265
>gi|26990197|ref|NP_745622.1| hypothetical protein PP_3485 [Pseudomonas putida KT2440]
gi|24985139|gb|AAN69086.1|AE016542_1 hypothetical protein PP_3485 [Pseudomonas putida KT2440]
Length = 213
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 19/197 (9%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVI---------TDGDISKRIALLKLQKING---ELEK 74
+ ++ S + + +NG I ++ + + + + G L
Sbjct: 6 LCLLLVLTSVSWADVPAARVNGVEIGLMRLERYFSEY-LDAQGRAVTSIRNPGLYKRLRD 64
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A+ ELI + L QE ++ GI V+ + G S F L + G +
Sbjct: 65 QALDELIDKELLWQEAQRQGIAVSDEQVSAQVGEIEAAFG-SPALFERRLAEAGFDRAQY 123
Query: 135 KQYLAIQSIWPD---VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+Y + ++ G +E AN+ +++ + ++
Sbjct: 124 TEYTRHEMAAQQVYALLSAVDAPSEGEVEAFFDANQDRLQGAQNQSDN--PLVIREHGLA 181
Query: 192 LQNQGFVQKRIKDAEES 208
L + +R A +S
Sbjct: 182 LARATLIGQREAQARQS 198
>gi|328552623|gb|AEB23115.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens TA208]
gi|328911027|gb|AEB62623.1| molecular chaperone lipoprotein [Bacillus amyloliquefaciens LL3]
Length = 285
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 97/302 (32%), Gaps = 42/302 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I + + + + + +T G++ +
Sbjct: 1 MKKIAIAAITATSVLALSACSSGDNDVIAKTDAGNVTKGELYTNM--------KKTAGAS 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +L+ E + +K ++ ++ G + +S+ + G +++ K
Sbjct: 53 VLTQLVQEKV---LAKKY--KVSDKEIDNKLKEYKTQLG---DQYSALKQQYG--EDYLK 102
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + K++ + + + K K++ +L + D K ++
Sbjct: 103 DQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRA--------SHIL--VADKKTADE 152
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254
+ + + + + +SK + G + + + F +
Sbjct: 153 VEKKLKKGE------KFETLAKEYSTDSSKDNG---GDLGWFDKKSMDETFSKAAFGLKV 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRSNA 312
++P T+ G I ++R + +K L + K+ + A ++K+ A
Sbjct: 204 GQVSDPVKTKFGYHIIKKTEERGKYDD--MKKELKEEVLKQKLNDNSAVQAAIQKVMKKA 261
Query: 313 II 314
+
Sbjct: 262 DV 263
>gi|260909467|ref|ZP_05916171.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472
str. F0295]
gi|260636392|gb|EEX54378.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472
str. F0295]
Length = 483
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 84/290 (28%), Gaps = 22/290 (7%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEI 90
++ + + E I D+ + A + K G + ++L V+ L +
Sbjct: 50 VPEASVVDEVIWVVGDEPILKSDVEAARLQAENEGHKFKGNPDCSIPEQLAVQKLFLHQA 109
Query: 91 EKSGITFDSNTVNYFFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ + ++ + S E + + +Q + +
Sbjct: 110 AIDSLEVSESEISQGIEEQINYWIQMVGSKEKLEEYRKQ---TITEMRQSMHDDYKNNRL 166
Query: 148 V---KNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ K + ++ + V + ++ P K + V+ +
Sbjct: 167 IAMMKEKLVSDVKVSPADVRKFFKDLPADSIPMVPTMVEVEIITQNPKVKTEEVNRVKDQ 226
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNT 257
+++ + + L + S+ + G+ + + P F + N
Sbjct: 227 LREYTDRVTKGETTFATLARLYSEDPGSARQGGELGFTGRAAFDPAFAAVAFNLTDPNKI 286
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ-NTPTKIEKHEAEYVK 306
+ T+ G I + DKR G+ ++ + N +
Sbjct: 287 SKIVETEFGYHIIQLIDKR---GDKVNVRHILLKPNVSQDDIDRSKARLD 333
>gi|54309794|ref|YP_130814.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium
profundum SS9]
gi|46914232|emb|CAG21012.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium
profundum SS9]
Length = 623
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 65/189 (34%), Gaps = 28/189 (14%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIA------LLKLQ 66
F + + ++ S +++I NG I+ D + R+ L
Sbjct: 23 FSFVFAGVGSYLAGGSQPAAAKI----NGTEISQNDFEQAYQNERNRMQSQLGDYFSTLL 78
Query: 67 KING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDF 120
+ + + +I + L +Q + G+ + + R+ + +
Sbjct: 79 GDPEYVKQFRQSVLDRMINDVLIEQRATELGLRISDEHIRKTITSMPEFQRDGQFDNDSY 138
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ L + G + F +Y+ + + F+ + + + ++ + ++ ++
Sbjct: 139 TMLLRRSGFTPDQFAEYMRTDML-----RTQFLTAIQGSDFTLDSELTALRKLEAQQRVV 193
Query: 181 RTVLFSIPD 189
R++ + D
Sbjct: 194 RSLTLDLAD 202
>gi|301154695|emb|CBW14158.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Haemophilus
parainfluenzae T3T1]
Length = 625
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 52/383 (13%), Positives = 121/383 (31%), Gaps = 93/383 (24%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGE--- 71
+ +L + ++ +S + + +NGE I+ D R + GE
Sbjct: 17 AIFALLPVSFLIGGMSGYLYGGNESFAAKVNGETISQQDFLNRYNQEFEARAQQEGESFL 76
Query: 72 -----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF--------------- 105
L + +Q L+ + L +Q ++ + + +
Sbjct: 77 AKTDSVEFVTALRQNLIQRLVDQELIRQYAKELKLGVSDDMIKRAIVSDPNLQSNGKFDN 136
Query: 106 --FVQHARNTGLSAEDFSSFLD--------KQGIGDNHF--------------------- 134
+ Q GL+++ +++ L + G+ D+ F
Sbjct: 137 ARYQQLLTQNGLTSDTYAAILRNALTLEQMQNGLADSEFVVPAQVKDSAQTFFQKRIARL 196
Query: 135 -----KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----------KMKNITVRE-- 177
+A Q + + +K + +L A Q K++ +T +
Sbjct: 197 ATLPLADEVAKQKVTEEEIKAYYDANAKSLVQPEQAKVQYIRVSANELGKLQPVTETQIA 256
Query: 178 --YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGK 233
Y F KL + ++ DA L+ D +L K S K+ G+
Sbjct: 257 QYYQENKAQFI--SQKLAHIQLATEKEADAVYQELQKGADFAELAKAKSVDKLSGAQGGE 314
Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LS 289
++ +++L F++ L + + P I + D+++ + + +
Sbjct: 315 LGWVKDNELPKNFEDAALLLNVGQYSTPVNVDGAYHIILVQDRKERTLDEVKEQIADSVR 374
Query: 290 AQNTPTKIEKHEAEYVKKLRSNA 312
++ + E +R+ A
Sbjct: 375 KNLAGSRFQAVEK----AVRAKA 393
>gi|51473757|ref|YP_067514.1| protein export protein PrsA precursor [Rickettsia typhi str.
Wilmington]
gi|51460069|gb|AAU04032.1| protein export protein PrsA precursor [Rickettsia typhi str.
Wilmington]
Length = 286
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 52/305 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------ 74
+ +IF V ++S ++ ++ T G + + I + +L +GE K
Sbjct: 8 LSVIFLSVSMLSSIAFCDQDKVVATYKGGEVKESQIMQEFK-PQLNLQSGETIKNFDDFP 66
Query: 75 -IAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++LI L K+E+ KS IT S L+ ++ + K I
Sbjct: 67 LQDQEKLIKIYVNNLLLKEEVAKSSIT-SSKEFQEKLEN--AKNQLAQQELLANYIKSNI 123
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
D F N ++ E + + +L
Sbjct: 124 TDKMFDDEY-----------NKYVDNLKGKE----------------QIKVAHILVKSQK 156
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-N 248
+ + K + + D + IG L P+F+
Sbjct: 157 EANTVKTKLSK-GGNFNKLAEEFSLDKATAS------NGGVIGYIILNQSGQLVPEFENK 209
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
N + P T G I + +K+ + I K + +Y+ L
Sbjct: 210 AFALKVNEVSTPVKTDFGWHIIKVLEKKPVP--IPTKKEAKVTIDNILAAEILKKYISDL 267
Query: 309 RSNAI 313
+ A
Sbjct: 268 EAKAD 272
>gi|254492046|ref|ZP_05105223.1| PPIC-type PPIASE domain protein [Methylophaga thiooxidans DMS010]
gi|224462743|gb|EEF79015.1| PPIC-type PPIASE domain protein [Methylophaga thiooxydans DMS010]
Length = 613
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 51/371 (13%), Positives = 112/371 (30%), Gaps = 96/371 (25%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------ 69
L + I F + + SY + A S + +NG+ IT ++ + + + Q N
Sbjct: 2 LIVGLISIPFALWGVNSYLTGA-SDVVVAEVNGKEITQAELQQSLQQYRDQMRNMMGEQF 60
Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAED 119
+++ + LI + L + EK G + ++ R+ AE
Sbjct: 61 DPAMFEGAMVKRNVLDGLIEQQLLRDANEKLGQRINDAEISQVIRTTPAFQRDGEFDAEY 120
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------------------------- 150
++ L + G ++ L + + +N
Sbjct: 121 YNMVLARVGYSPASYEAQLRADLMSQQLTQNIETTALATEKDVRQTLRLQEQRREIAYGV 180
Query: 151 ----DFMLKYGNLEMEIPANKQKMKN-----------------------ITVRE------ 177
+++ + + E+ ++ +TV E
Sbjct: 181 VPVQEYVEQVSVTDDEVQQLYDNHQSNYQSPEQLKLNYIELSVATISSTLTVTEDDLKQF 240
Query: 178 YLIRTVLFSIPDNKLQNQGFVQ------KRIKDAEESRLRLPKDCNKLEKFASKIHDVS- 230
Y F P + + ++ + +A +RL +D + L + S+ +
Sbjct: 241 YADNQSQFVGPQQRRASHILIEGDDNDAQTTIEAIATRLENGEDFSSLAEELSQDPGSAS 300
Query: 231 -IGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRDLGG------- 280
G + + P F+ + + + P T+ G I + D + G
Sbjct: 301 QGGDLGFFERDVMDPAFEEAAFALETIGDVSEPVKTEFGYHLIKLTDIKQPEGQEFSQVR 360
Query: 281 EIALKAYLSAQ 291
+ K Y Q
Sbjct: 361 DEVEKLYRRQQ 371
>gi|319900078|ref|YP_004159806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
helcogenes P 36-108]
gi|319415109|gb|ADV42220.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
helcogenes P 36-108]
Length = 455
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 109/306 (35%), Gaps = 43/306 (14%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS---SRIRTTINGEVITDGDISK-RI-ALLKLQK 67
+K ++ +++F + + + + + E I ++ + R+ AL + +K
Sbjct: 1 MKKCMSFKFVVLFALTLLAGSTVYGQDNVIDEVVWVVGDEAILKSEVEEARMSALYEGRK 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL---- 115
+ + + +E+ V+ L + I V N + +
Sbjct: 61 FDRDPYCVIPEEIAVQKLFLHQAALDSIEVAEAEVLQRVDYMTNMYISNIGSREKMEEYF 120
Query: 116 --SAEDFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQK 169
++ L ++G+ +Q L + + P V+ F + IP
Sbjct: 121 NKTSSQIRETLRDNAREGLKVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIP----- 175
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
T E I T+ IP ++++ V++R+++ + R+ + + L + S+
Sbjct: 176 ----TQVEVQIITLQPKIPQEEIED---VKRRLREYTD-RVNKGESFSMLARMYSEDRGS 227
Query: 230 SIGKAQYLLESD--LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
+I + L P + ++ + + ++ G I + +KR G+
Sbjct: 228 AIRGGEIDFSGRGMLDPAYASVAFNLQDPTKVSKIVESEYGFHIIQLIEKR---GDRIKT 284
Query: 286 AYLSAQ 291
++ +
Sbjct: 285 RHILLK 290
>gi|254504552|ref|ZP_05116703.1| PPIC-type PPIASE domain protein [Labrenzia alexandrii DFL-11]
gi|222440623|gb|EEE47302.1| PPIC-type PPIASE domain protein [Labrenzia alexandrii DFL-11]
Length = 282
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 92/295 (31%), Gaps = 50/295 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKING 70
++ + I + + S A + + VIT+ DI+ L +LQ+
Sbjct: 1 MRRPIKALAVSIMALTLGSASLSAAEPDDVVAKVGDAVITEADIAFAAQDLGQELQRFPA 60
Query: 71 EL-EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++ + +I L + G+ D + F L+
Sbjct: 61 AQWRQLLLDVMIDMELLALAAKNDGLDQDPD-------------------FKKQLE---- 97
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+L ++++ + + +++ +K+ + E R +L
Sbjct: 98 -------FLELRALRNAYLGQKINASITDADVKTAYDKEFAEFEGPEEINARHILVE--- 147
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN 248
K +A + L D +L K S + G Y + + P F+
Sbjct: 148 ---------DKAAAEALIAELDGGADFAELAKEKSTGPSGPNGGDLGYFAKGQMVPPFEE 198
Query: 249 L-LKKSQNNTTN-PYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299
+ T P TQ G I + DKR + ++A L Q + E
Sbjct: 199 AAFALEPGSFTKEPVETQFGWHIIKVEDKRRQEKPALDTVEANLRQQLARERYEA 253
>gi|56460109|ref|YP_155390.1| periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
loihiensis L2TR]
gi|56179119|gb|AAV81841.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
loihiensis L2TR]
Length = 622
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/392 (12%), Positives = 114/392 (29%), Gaps = 100/392 (25%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKINGE------ 71
++I+ + V + + +NGE I +D D + +LQ+ G+
Sbjct: 19 VLIILTFALAGVGGYITSDTEDAVAKVNGEEIPRSDYDRAYENERSRLQEQFGDMFSAIT 78
Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS- 122
L +++LI + L Q E +G+ V ++ +A F +
Sbjct: 79 SDPDYMRNLRSGVLEQLIEQELLVQYAEDNGMRVSPEQVKAAIRDISQ--FRTAGQFDND 136
Query: 123 ----FLDKQGIGDNHFKQYLAIQSIWPDVVKN---------------------------- 150
L G F + + +++
Sbjct: 137 VYLMALRNAGYSPEAFAKVMQQDMTRNQLLRGLSATAFVLEPEAIAFMRLQSQSRSGGFL 196
Query: 151 -----DFMLKYGNLEMEIPANKQKMKNITVRE---------------------------- 177
F + E +I Q+ +++ +
Sbjct: 197 VASNESFEEQVEIAEQDIENFYQQNQDMFRTQEKLSVAYVELSLAAVESEVEISDEEVRQ 256
Query: 178 -YLIRTVLFSIPDNKLQNQGFVQ------KRIKDAEESRLRLPKDCNKLEKFAS--KIHD 228
Y R +S + + + ++ K+ + + L+ D +++ + S
Sbjct: 257 YYDERQQQYSTEEERRVSHILIEFETDNAKKKAEEALAELKQGADFSEVAQTYSDDTFSA 316
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLGGE--IAL 284
G ++ + F + + + + ++ T G I + D R+ +
Sbjct: 317 EQGGDLGWIEAGMMDEDFDASVFELENVGDLSDVVETSFGYHIIKLTDLREGSVTPFNEV 376
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
K + Q K E Y +K + A I +
Sbjct: 377 KDEVRQQLLTEKAED---RYFEKQQKLAEISF 405
>gi|152974625|ref|YP_001374142.1| peptidylprolyl isomerase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023377|gb|ABS21147.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus cytotoxicus
NVH 391-98]
Length = 282
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 94/282 (33%), Gaps = 44/282 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
++ +++ + S +I T+ G D++K L++ G K ++ +
Sbjct: 4 AMLALAATSVIALSACGSSDKIATSKAG------DVTKDELYASLKQQGG---KQVLRNM 54
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
IVE + + D V+ + + + G + F + L +QGI + K +
Sbjct: 55 IVEKVFIK-----NYKVDDKDVDKKYDEFKKQYG---DQFDTLLKQQGIKEETLKTSVRA 106
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q + ++ + E + + + +L + + + + +
Sbjct: 107 QLA------QEKAIEKSITDEEAKKKYRD------KRVFAKHILVKDEETAKKVKEELGQ 154
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNT 257
K L K S+ G L L +F++ K ++
Sbjct: 155 ------------GKSFEDLAKQYSEDPGSKEKGGDLGELKPGTLVKEFEDAAFKMKKDEV 202
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ P + G I + D +D KA + + K++
Sbjct: 203 SEPVKSSFGYHIIKVTDIKDAKPFKEEKAAIKKEIAQQKLQD 244
>gi|282880885|ref|ZP_06289578.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1]
gi|281305267|gb|EFA97334.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1]
Length = 489
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 74/257 (28%), Gaps = 27/257 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKS 93
+ + E I D+ + +LQ K G + + + V+ L + E
Sbjct: 51 DEVIWVVGDEPIMKSDVE----MTRLQSEAEGVKFKGNPDYSIPEHIAVQKLFLHQAELD 106
Query: 94 GITFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ V + G SAE +G + + L +V+
Sbjct: 107 SVEIPEAQVTASIERQINRWIEMAGGSAERLE---AYRGQTISQMRSQLRDDFRNNLLVQ 163
Query: 150 N---DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
N + ++ A + + ++ + I + + +
Sbjct: 164 NMQEKLVQDVKVTPSDVRAYFKDLPADSIPFVPTEVEVEIITRKPKILPEEINRVKNELR 223
Query: 207 ESRLRL---PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTN 259
R+ L + S+ + G+ Y+ L P F N+ +
Sbjct: 224 NFTNRVTSGETSFATLARLYSEDPGSARQGGEMDYMGRGMLDPDFANVAFNLTDPKKISK 283
Query: 260 PYVTQKGVEYIAICDKR 276
T+ G I + DKR
Sbjct: 284 IVETEFGYHIIQLIDKR 300
>gi|189502175|ref|YP_001957892.1| hypothetical protein Aasi_0785 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497616|gb|ACE06163.1| hypothetical protein Aasi_0785 [Candidatus Amoebophilus asiaticus
5a2]
Length = 445
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/249 (9%), Positives = 82/249 (32%), Gaps = 14/249 (5%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITF 97
++ +++ + I ++ L + Q + ++ +++ + K I
Sbjct: 32 DKVIASVDDQPILQSELDAEYQLYQAQDNASKKPTKCQVLENMVINKILLANAAKKEINV 91
Query: 98 DSNTVNYF----FVQHARNTGLSAEDFSSFLDKQ-GIGDNHFKQYLAIQSIWPDVVKNDF 152
+ V+ + G + ++ K + ++ + Q +++
Sbjct: 92 KNGEVDRYLKYRMQAILEEVG-TEARLEQYIRKPIHVFKEELRKSIREQLTIEK-MRDSI 149
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RL 210
+ +E+ + ++ V + + + + + I++ R+
Sbjct: 150 IGNITISPIEVQSYFDQLPASDVPFFPATVEAYQLVLFPSIEEQEKKLVIENLASLKTRI 209
Query: 211 RLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGV 267
+ + L + S+ + G+ + +L ++ L + + P T+ G
Sbjct: 210 QAGESFAVLARQYSEDIGSASNGGELGFWRIGELDSSYEKAALALNPGEISEPVETRFGF 269
Query: 268 EYIAICDKR 276
I + +K+
Sbjct: 270 HIIQLIEKQ 278
>gi|167032914|ref|YP_001668145.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
GB-1]
gi|166859402|gb|ABY97809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas putida
GB-1]
Length = 623
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 27/185 (14%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V + QHA+ +S + I K+ + F
Sbjct: 203 VKVSEEEVKAHYDQHAKEF-MSPDQVV-------IDYIELKKSV-------------FFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + E+ A +K + +L + N + + R ++ E+ RL +
Sbjct: 242 QVKVTDEELKAQYEKEIANLAEQRHAAHILIEV--NDKVTEAQAKARAEEIEQ-RLAKGE 298
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIA 271
D L K S+ + G + P F++ L K Q + P T+ G I
Sbjct: 299 DFAALAKEFSQDPGSANNGGDLGFAGPGVYDPAFEDALYKLQDGQVSTPVRTEFGYHLIK 358
Query: 272 ICDKR 276
+ +
Sbjct: 359 LLGVQ 363
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + A S+ +NG+ I+ ++S+
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIVVLMALTGFEAIFQAATHSQDAAKVNGQTISQNELSQAA 60
Query: 61 ALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q E + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDPALLDDKLLREEALKGLISRKLLLQGAEDAKFAFSEAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + SA+ F + + G G F++ LA + + + + + ++
Sbjct: 121 QTPEFQVDGKFSADRFDQVIRQMGYGRMQFREMLAEEMLIGQL-RTGLAGSSFVTDQQVD 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|154247041|ref|YP_001417999.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthobacter
autotrophicus Py2]
gi|154161126|gb|ABS68342.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthobacter
autotrophicus Py2]
Length = 338
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 93/281 (33%), Gaps = 49/281 (17%)
Query: 40 SRIRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
+ T+NG I D+ A L Q + E+ + L TL + E +
Sbjct: 75 DTVVATVNGTPIRQSDVTIALEDIGAGLPPQLQGAQREEYVLSFLTDMTLLAKAAEAQKL 134
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ F+Q +A + +++
Sbjct: 135 DQSPD---------------------------------FQQRIA-------YARTKALME 154
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ A ++ K+ T E++ + + + ++ + + + +D
Sbjct: 155 TLMTQEAKKAVSEEAKHKTYDEFVKSA--PAEAEVRARHILVDDEAKAKEIAKKAKAGED 212
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
KL K SK G Y + + P+F K + ++P +Q G I + D
Sbjct: 213 FAKLAKDYSKDSAEDGGDLGYFTKDQMVPEFAEAAFKLDKGQVSDPVKSQFGWHVIKVED 272
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
KR + +S Q + K +A+ V KLR++A I
Sbjct: 273 KRQKP--VPTYDQVSDQVEQYLVRKAQADLVTKLRTDAKIE 311
>gi|168700601|ref|ZP_02732878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gemmata
obscuriglobus UQM 2246]
Length = 367
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 81/294 (27%), Gaps = 23/294 (7%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NG+ I + + + + Q + K + LI L + + T D V
Sbjct: 70 AAVVNGKPIPEVAVYRALRQFPEQHRDM-ARKEIMAHLIENALIDEYLTALKTTVDEKDV 128
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND---------FM 153
+ + +D++ L+ + + F+ + Q W V+ F
Sbjct: 129 EKLIADLKKELTEAKKDYAKELEAMMLTEAEFRSEVTAQMKWEKFVQQQGTDAALKQLFE 188
Query: 154 LKYGNLEMEIPANKQKMKNITVREY-------LIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + + E +R + ++ + +
Sbjct: 189 SSPDVFDGTMVRARHILMTPGTDEAKRKDADQKLRGIKQAVEQEAAKAVAALPATADAVA 248
Query: 207 ESRLRLPKDCNKLEKFASKIHDV----SIGKAQYLLE--SDLHPQFQNLLKKSQNNTTNP 260
+ + R+ K +A G + + + P + ++
Sbjct: 249 KEQARVSKTDEMFAAYAKGYSTCPSKKDGGDLNFFPRAGAMVEPFAKAAFALKPYQMSDV 308
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T+ G I + +R + + + + ++ A I
Sbjct: 309 VATEFGYHLILVTQRRQGTPKKFEDKGVKEDVQMLYAMRLRESVIAMMKPKAQI 362
>gi|124266954|ref|YP_001020958.1| putative exported isomerase [Methylibium petroleiphilum PM1]
gi|124259729|gb|ABM94723.1| putative exported isomerase [Methylibium petroleiphilum PM1]
Length = 272
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 22/205 (10%)
Query: 120 FSSFLDKQGIGDN-HFKQYL--AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV- 175
F+ +K+G+ +K + A QSI + DF K + E+ A K K
Sbjct: 79 FTQAAEKRGVAATPEYKAQMELARQSILIRELFADFQKKNPVTDAEVQAEYDKYKAQAGD 138
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGK 233
+EY +R +L D A ++++ + K +SK + G
Sbjct: 139 KEYRVRHILVETEDE------------AKALIAQIQGGASFEETAKKSSKDPGSAPNGGD 186
Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+ P+F N ++K + T P +Q G + + D RD + A + Q
Sbjct: 187 LDWAAPGSFVPEFSNAMVKLEKGKMTEAPIKSQYGFHILKLEDVRD--AQFPPLAEVKPQ 244
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIHY 316
++ + +L+S A Y
Sbjct: 245 IEQRLSQQKVGAFRDELKSKAKTDY 269
>gi|167841272|ref|ZP_02467956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
thailandensis MSMB43]
Length = 296
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 4/162 (2%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E++ ++ + R + + ++P N +R SR R
Sbjct: 122 SDAEIQAAYDRNLPAFMAPRALHVAQIYIAVPPNAEAATLDKARRQAADLASRARNGDFA 181
Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274
+ + + G ++ E + P+ + + P T G + + D
Sbjct: 182 ALAKANSQDHASAANGGDLGFVPEPLMLPEVRQAAGALKPGQVSAPIRTPAGFHVVKLID 241
Query: 275 KRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R K + A + +++ Y+ KL +NA I
Sbjct: 242 ARAAAPRPLADVKEQVRAMLRAQRTQQNAQAYLAKLTANAPI 283
>gi|330972584|gb|EGH72650.1| periplasmic folding chaperone [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 627
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/402 (14%), Positives = 115/402 (28%), Gaps = 103/402 (25%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGLIIALMAFTGIEAMFTATSNKQNAAEVNGEDISQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLSQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGATDAKFSFSDAALD 120
Query: 104 YF-----------------FVQHARNTGLSAEDFSSFLDK--------QGIG-------- 130
F Q R G S F L + G+
Sbjct: 121 QQLLQAPEFQVDGKFNADRFDQVIRQLGYSRLQFRQMLGQEMLIGQVRAGVAGSAFVTDA 180
Query: 131 --------------------------------------DNHFKQYLAIQSIWPDVV---K 149
D H K++++ + + D + K
Sbjct: 181 QVEAFARLEKQTRDFASLTLPADTSAVKVTDDEVKAHYDEHAKEFMSPEQVVLDYIELKK 240
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ F K + ++ A QK + +L + N N + +I++ ++ R
Sbjct: 241 SSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEIQQ-R 297
Query: 210 LRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKG 266
L +D L K S+ S G Y + P F+ L +++ + P T G
Sbjct: 298 LAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRTDFG 357
Query: 267 VEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
I + L +Q K +
Sbjct: 358 WHLIKLLGVEAPSVPSFASLKGKLTNDLKSQLVEQKFVEVTK 399
>gi|182679969|ref|YP_001834115.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182635852|gb|ACB96626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 303
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 55/168 (32%), Gaps = 14/168 (8%)
Query: 158 NLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAE--ESRLRLP 213
E E+ A K+ + R Y + + + P + A E +L
Sbjct: 118 PTEAEVRAAYDANKSALIAPRRYQLAQIFIAAPKIDQTKDDKTKDEKTSARLDELMKKLQ 177
Query: 214 KDCNKLEKFASKIHDVS-----IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGV 267
E A + D G+ +L E L P+ + + ++ TT P G
Sbjct: 178 GKSGDFEVLAREYSDAKAEAAKGGEIGWLAEPSLMPEIRQAVSGLTKGATTAPIRLNDGW 237
Query: 268 EYIAICDKRDLGGE----IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ I D R+ G E +K L+ Q ++ Y+ L
Sbjct: 238 HILHILDIREAGSEPLPFTEVKGPLAEQMRRQRLTNERQTYLTHLLKQ 285
>gi|78043454|ref|YP_359635.1| hypothetical protein CHY_0781 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995569|gb|ABB14468.1| hypothetical protein CHY_0781 [Carboxydothermus hydrogenoformans
Z-2901]
Length = 209
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 11/163 (6%)
Query: 15 LLTTYFVLIIFCIVP---IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
LL F + ++ ++ + INGE +T +++K I ++
Sbjct: 13 LLCGIFFALAGLLLSVKFFLNVNQKTYQPNVLVIINGEALTTSEVNKVIKNYRIAGSQAA 72
Query: 72 LE-KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAED--FSSFLDKQ 127
+ +LI E L QE ++ I + Q L S ++ +K+
Sbjct: 73 NRLDQILSDLIDEKLILQEAKRRKIDATREEIEARLKQL--KNHLPSLYQQIYTQMSEKE 130
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
K + IQ ++ +V+ + G E + K+K
Sbjct: 131 --YKEILKNRIIIQKLYTEVISSQKNKPTGEHEPLETSQKEKE 171
>gi|226314601|ref|YP_002774497.1| hypothetical protein BBR47_50160 [Brevibacillus brevis NBRC 100599]
gi|226097551|dbj|BAH45993.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 214
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 12/163 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGE 71
I +LT ++ ++ Y+SWA + T IT + +++K G
Sbjct: 6 ISMLTVAILVTGLAVLGF--YQSWAKGNDPVLVTAGDTSIT-----QNQLYGEMKKTYG- 57
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K + EL+ E L KQE + + +N + G S E F ++L G+ +
Sbjct: 58 --KQTIHELVAEALIKQEAKAQNVAVTQEDMNKEIDSMKKQVG-SPEAFQNYLKSMGMTE 114
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ L + ++ F + ++ NK ++ +
Sbjct: 115 AQLRDKLNVLMTRDKLLDKAFPVTEEQIKTYYDTNKAQLGSPA 157
>gi|52079482|ref|YP_078273.1| molecular chaperone PrsA [Bacillus licheniformis ATCC 14580]
gi|52784844|ref|YP_090673.1| hypothetical protein BLi01072 [Bacillus licheniformis ATCC 14580]
gi|319646731|ref|ZP_08000960.1| PrsA protein [Bacillus sp. BT1B_CT2]
gi|52002693|gb|AAU22635.1| molecular chaperone PrsA [Bacillus licheniformis ATCC 14580]
gi|52347346|gb|AAU39980.1| PrsA [Bacillus licheniformis ATCC 14580]
gi|317391319|gb|EFV72117.1| PrsA protein [Bacillus sp. BT1B_CT2]
Length = 286
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 91/301 (30%), Gaps = 41/301 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I + S + IT D+ + +
Sbjct: 1 MKKIAIAAITATSVLALSACSGGDSEVVAETKAGNITKEDLYQ--------TLKDNAGAD 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A+ L +Q++ ++ ++ ++ G + + +D++G ++ K
Sbjct: 53 ALN-----MLVQQKVLDDKYDVSDKEIDKKLNEYKKSMG---DQLNQLIDQKG--EDFVK 102
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + K++ + +++ K K + +L
Sbjct: 103 EQIKYELLMQKAAKDNIKVTDDDVKEYYDGLKGK--------IHLSHILVK--------- 145
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESD-LHPQF-QNLLKK 252
+K+ + E +L+ + L K S G ++ + D + F +
Sbjct: 146 ---EKKTAEEVEKKLKKGEKFEDLAKEYSTDGTAEKGGDLGWVGKDDNMDKDFVKAAFAL 202
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P +Q G I ++R ++ + Q + + KL +A
Sbjct: 203 KTGEISGPVKSQFGYHIIKKDEERGKYEDMKKELKKEVQEQKQNDQTELQSVIDKLVKDA 262
Query: 313 I 313
Sbjct: 263 D 263
>gi|242240288|ref|YP_002988469.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Dickeya dadantii
Ech703]
gi|242132345|gb|ACS86647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dickeya dadantii
Ech703]
Length = 626
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 24/189 (12%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLK 86
+NG+ I+ + + + + ++ +L K A+ +LI +TL
Sbjct: 42 AAKVNGQEISRAQLEQAVQNERNRQQEMLGENFSALAANEGYMQQLRKQALSQLIDDTLI 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q G+ V N E + + + + G+ + + Q L Q +
Sbjct: 102 DQFARNLGLNISDEQVKQAIFSVPAFQTNNRFDNEKYLAQVQQLGLTPDVYAQLLRKQLV 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+V+ G ++P + I ++ IRT + +
Sbjct: 162 TQQLVRG-----LGGSNFQLPQEIDNLVAIAAQDRTIRTATIDLDARAKTQTASDDEIQN 216
Query: 204 DAEESRLRL 212
++ R
Sbjct: 217 FYNQNSSRY 225
>gi|242277701|ref|YP_002989830.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
salexigens DSM 2638]
gi|242120595|gb|ACS78291.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
salexigens DSM 2638]
Length = 633
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 25/190 (13%)
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
I + F+ + + F+ I +Y+A +
Sbjct: 203 NIKISDKQIEDFY-------KANPDKFT-------IPARSVVKYIA-------FTPEELS 241
Query: 154 LKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ EI A + K +E R +L ++ +N ++ ++ +
Sbjct: 242 INETVTPEEIKAYYEANKETFQQEAQVNARHILITVDENASDKDVAAAEKKIKKVLAKAK 301
Query: 212 LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
+D K +K++ G+ + + F+ + + P T+ G
Sbjct: 302 SGQDFGKLAKKYSEGPSSSKGGELGWFGRGAMVKPFEEAAFALKKGEISEPVRTRFGWHL 361
Query: 270 IAICDKRDLG 279
I I D R+ G
Sbjct: 362 IKIDDVREAG 371
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 61/179 (34%), Gaps = 21/179 (11%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI------------SKRIALLKL 65
+ ++I I + + + +N + + + ++ L
Sbjct: 17 AFGIIIAVFIFAFGAGGFNGNTDPVIAYVNDQPVPTQEFMQVYRETAEALRAQNPNLDSD 76
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY------FFVQHARNTGLSAED 119
Q + E +K +++L+ + L + E EK G++ ++ ++Y F ++
Sbjct: 77 QLQSPEFKKAVLEQLVSQKLLEAEAEKLGLSVSNSELSYSISKIPAFADKDGKFDMNLYQ 136
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
+FL + + F+ + ++ + + M E + A +Y
Sbjct: 137 --AFLQSRAMSAATFENDMRNSALISKLQEYVTMP-VKPTEADARALFDSAAEKVQIDY 192
>gi|300691410|ref|YP_003752405.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia
solanacearum PSI07]
gi|299078470|emb|CBJ51122.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia
solanacearum PSI07]
Length = 637
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/396 (12%), Positives = 101/396 (25%), Gaps = 106/396 (26%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKLQKIN 69
L+ V F + Y + S + VIT ++ R+ L ++
Sbjct: 3 LVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDTRVREQTERLRQMLGAQ 62
Query: 70 GELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL------ 115
+ + + +I + + E + ++ + V Q L
Sbjct: 63 YDPRQFEGSQMRRDVLDGIIQQRVMVNEASRVNLSVADSKVRETIEQIPAVAQLRKPDGK 122
Query: 116 -SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFML--------KYGNLEME 162
+ + L QG+ F L + + +V F+ + + + E
Sbjct: 123 FDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSTAFVPKSLVDRLIEARDQQRE 182
Query: 163 IPANKQKMKNITVRE----------YLIRTVLFSIPDNKLQN------------------ 194
+ A K + + Y F++P+
Sbjct: 183 VQALLLKPADYAGKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIPVTPE 242
Query: 195 ---------------------------------QGFVQKRIKDAEESRLRLPKDCNKLEK 221
K AEE + K +
Sbjct: 243 QLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKTPGNFAE 302
Query: 222 FASKIHD-----VSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICD 274
A K G+ +L + P F+N L K + ++ + G I + +
Sbjct: 303 LAKKYSGDPGSAAQGGELGFLAKGATVPPFENALFALKQPGDISDVVESDFGFHIIKLEE 362
Query: 275 KRDLGGEIA------LKAYLSAQNTPTKIEKHEAEY 304
+ G + L+ + Q K + +
Sbjct: 363 VKGGGVQSLEAVKPELEREVRTQLANKKYTELADAF 398
>gi|319793857|ref|YP_004155497.1| ppic-type peptidyL-prolyl cis-trans isomerase [Variovorax paradoxus
EPS]
gi|315596320|gb|ADU37386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
EPS]
Length = 261
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 96/286 (33%), Gaps = 48/286 (16%)
Query: 35 SWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92
A ++ +NG+ + D+ + + + E++ +E++ + QE +K
Sbjct: 19 PMAALAQNAAIVNGKPVPKARMDVLAQQLAAAGRPVTPEMQSQLREEIVAREVFMQEAQK 78
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G+ + + N + AR L F + +
Sbjct: 79 QGLDANDDYKNQL--ELARQAILIRALFDN-----------------------------Y 107
Query: 153 MLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ ++ A K + +EY R +L D + ++K K + ++ +
Sbjct: 108 RKTNPVSDADVKAEYDKFVAANGGKEYKARHILVETEDQAKKIMADLKKGAKFEDIAKKQ 167
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEY 269
+ G + + P+F ++K + TT P TQ G
Sbjct: 168 SKDPG----------SGANGGDLDWANPASFVPEFSEAMIKLKKGETTPAPIKTQFGYHI 217
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D R ++ + Q T ++ +Y ++LR+ A +
Sbjct: 218 IRVDDIRQ--AQLPKLEEVKPQVTQQLQQQRLQKYQEELRAKAKVE 261
>gi|228924392|ref|ZP_04087629.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835272|gb|EEM80676.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 290
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 90/257 (35%), Gaps = 30/257 (11%)
Query: 63 LKLQKINGELEKIAVQELIVE-TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L ++ N EL++ A + ++ + L+K ++K + + + G ++F
Sbjct: 43 LTKEEFNKELKEKAGESVLQQVMLEKILLDKY--KVSDDETKKNVDELKKEMG---DNFK 97
Query: 122 SFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
S+L ++ + ++ K L Q + +K E EI KN +
Sbjct: 98 SYLTQKNVKNEDELKDKLKTQMAFEKAIKA------SITEKEI-------KNYYKPILKV 144
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L ++ ++ + S E SK +G+
Sbjct: 145 SHILVK-------DEKTAKEIKEKINNSEDFTTVAKEHSEDPGSKEKGGELGELNAFQMD 197
Query: 241 DLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ P+F+ + P + G I + +K++L K +S + +++
Sbjct: 198 RMDPKFKEATYNLETGQVSEPIKSSFGYHIIKMIEKKELKPFNQEKENISKELEAKRLKD 257
Query: 300 H--EAEYVKKLRSNAII 314
+ ++ K L A I
Sbjct: 258 QQWQQKFFKDLFKQADI 274
>gi|114570817|ref|YP_757497.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris
MCS10]
gi|114341279|gb|ABI66559.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Maricaulis maris
MCS10]
Length = 317
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 84/286 (29%), Gaps = 55/286 (19%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKI-------AVQELIVETLKKQEIEK 92
+ + +I D+ R AL + + + + ++ELI + L E +
Sbjct: 43 DPVVARVERTMIRRSDVE-REALAQDGEEASPVPAMGSAEFDRVLEELIDQRLLALEARR 101
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G+ L+ + + + +V+
Sbjct: 102 RGLHQSEE----------ARRRLALAE----------------ERILGNV----LVETVI 131
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ ++ +Q E R +L + + + + + AE +
Sbjct: 132 DDAVTDETIQRIYEEQVRLIPLGEEVRARHILVQTQEEAVAIKALIDQGRDFAELAVAMS 191
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
+LE G Y + P F + + + P+ T+ G +
Sbjct: 192 EDQATRLE----------GGDLGYFSREGILPAFGAVAFATPEGAVSEPFRTEFGWHLLT 241
Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ D+R +L+ ++ T ++E + LR A I
Sbjct: 242 VVDRRRQPPPSLESLRPNIARFYTFDQLEAL----IDGLRDQAEIE 283
>gi|116620335|ref|YP_822491.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|116223497|gb|ABJ82206.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
Length = 327
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 92/288 (31%), Gaps = 49/288 (17%)
Query: 41 RIRTTINGEVITDGDISKRI-ALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITF 97
R+ + +T G + + + A + Q++ NG +Q+LI + QE ++ +
Sbjct: 57 RVILQVGEIALTAGQLEQILEAYSEAQRVYVNGPGRPQFIQQLIRVLMLSQEGKRRKLDE 116
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
L+ GI NH ++ + + D + D++
Sbjct: 117 TDR----------YRNQLTY-------SAAGILSNHTEEDIRKKIKIDDAMLEDYL---- 155
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-----KLQNQGFVQKRIKDAEESRLRL 212
K + + R +L P + Q + + + A+E R ++
Sbjct: 156 -----------KAHPLDYMQVRARHILIRTPGSSLPLEPGQKELTDAEALTKAQELRAKI 204
Query: 213 PKDCNKLEKFASKIHDVS----IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGV 267
+ + + +D+S G + + P + + P T G
Sbjct: 205 VAGADFADVAKIESNDISTNTKGGDLGFFKRGQMAPSIEEAAFALKPGEISQPVKTSMGY 264
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + + + + L+ L + +YV L++ I
Sbjct: 265 TVIKVEEIKPVKSFEELRPDLERNLRN----ELTRKYVDDLKALTKIE 308
>gi|313607374|gb|EFR83765.1| foldase protein PrsA [Listeria monocytogenes FSL F2-208]
Length = 257
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 70/227 (30%), Gaps = 32/227 (14%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
V+ F ++ G + FS+ L + G+ + FK L +V+
Sbjct: 31 KVSDEDVDKKFNEYKSQYG---DQFSAVLAQSGLTEKSFKSQLKYNL----LVQKATEAN 83
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + + + + +NK + K + D
Sbjct: 84 TDTSD----KVLKDYYKTWQPDITVSHI-LVADENKAKEVEQKLKDGAKFADLAKEYSTD 138
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAI- 272
E + G+ + P F+ K++ + + P TQ G I +
Sbjct: 139 TATKE---------NDGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMD 189
Query: 273 ---CDKRDLGGEIALKA-YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+KA YL +Q T ++K +K+ A +
Sbjct: 190 KPATKTTFEKDKKAVKASYLESQLTTENMQKT----LKEEFKKANVE 232
>gi|300721987|ref|YP_003711267.1| peptidyl-prolyl cis/trans isomerase [Xenorhabdus nematophila ATCC
19061]
gi|297628484|emb|CBJ89049.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of
outer membrane proteins [Xenorhabdus nematophila ATCC
19061]
Length = 626
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 66/180 (36%), Gaps = 27/180 (15%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ + + + +++ F + + Y S S +NG+ I+ ++ +
Sbjct: 1 MMDNLRTAANGPVLKIVLALIILTFLLTGVTGYLSSESGSY-AAKVNGQTISRAELEQ-- 57
Query: 61 ALLK----LQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
A L+ LQ+ G+ + + ++ LI L +Q K G++ + V
Sbjct: 58 AFLQEKDVLQERLGDQFSALLSDEQQVRQIRRQSLDRLINTVLIEQYANKLGLSASDDQV 117
Query: 103 NYFFVQH------ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ +D+ + L + I +HF + + I +++ +
Sbjct: 118 AEEIRNTSFLQTDGKFDNKKYQDYLNMLARSNISPDHFAAQVRKELINRQLMQVLMGSEI 177
>gi|148268312|ref|YP_001247255.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus
aureus subsp. aureus JH9]
gi|147741381|gb|ABQ49679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Staphylococcus
aureus subsp. aureus JH9]
Length = 271
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+KQ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKQNLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K + + G I D E K L + K++K +
Sbjct: 217 EKALFKLKDGEVSEVVKSSFGYHIIKADKPTDFNSE---KQSLKEKLVDQKVQKIQN 270
>gi|49477885|ref|YP_036943.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49329441|gb|AAT60087.1| peptidylprolyl isomerase (protein export protein prsA) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 280
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKIVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G ++F+++++ G+ ++ K
Sbjct: 59 VEKVLNDKYK----------ATDEEVTKQIKELKTKMG---DNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K E EI K+ + +L
Sbjct: 106 EKLKLTFAFEKAIKA------TVTEKEI-------KDHYKPKLQASHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G + +F++ K
Sbjct: 145 EKTAKEIKE----KLNNGEDFAALAKRYSEDPGSKEKGGDLSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + K++L K + + +I+ + + + +
Sbjct: 201 EVGQVSEPIKSSFGYHIIKLTGKKELKPYEEEKVNIRKELEQQRIQDPQFHQQVTRDILK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|255534611|ref|YP_003094982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteriaceae
bacterium 3519-10]
gi|255340807|gb|ACU06920.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteriaceae
bacterium 3519-10]
Length = 467
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/309 (11%), Positives = 81/309 (26%), Gaps = 28/309 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L T F+L F + K+ + I + E+I + DI + + Q +
Sbjct: 22 LLTSFILTFFGVQTHAQLKTGDLVDGIAVVVGNEIILESDIEDQANYAQQQGAAVADKCE 81
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
V+ +I L E ++ + + + +K
Sbjct: 82 FVESIINNKLLIYEAKR------DTLIENRSESIKETANQKYAQILGQFPDEKTMLSTYK 135
Query: 136 QYLAIQSI-----------WPDVVKNDFMLKYGNLEMEIP---ANKQKMKNITVREYLIR 181
+ + + + K E+ Q E +
Sbjct: 136 FRTSYEMKNAIEKIDTDNYYGQMKFGRITEKADVTPNEVTDFFNTYQFQLPEVKDEVSLS 195
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE-- 239
+ + R+ + ++ ++ + G +
Sbjct: 196 QITMYPKLTDAHKDEII-ARLNKIKADIAAGESFESQARIYSEDPGSAATGGLYKNVARG 254
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ P L + + P ++ G I + K G++ ++ + P E
Sbjct: 255 KMVKPFEAAALNLQEGELSEPVESEFGYHLIQLVKK---SGKMYDARHILLKAEPNADEI 311
Query: 300 HEAEYVKKL 308
A K+L
Sbjct: 312 ASAR--KEL 318
>gi|320334162|ref|YP_004170873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
maricopensis DSM 21211]
gi|319755451|gb|ADV67208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
maricopensis DSM 21211]
Length = 331
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 78/247 (31%), Gaps = 36/247 (14%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG-IGD 131
++++ + Q SG+ D+ V+ + A+ ++ L+ G + +
Sbjct: 87 RPEILEQVARQRAVLQLAANSGLKVDTAKVDQSIEDLRKEYPADAD-YTDALEGSGYVSE 145
Query: 132 NHFKQYLA-IQS--IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+Q +A Q + D ++ F + ++K E + +L
Sbjct: 146 AALRQSIADAQLYRAYLDTIRGKFKFSDSVVNGYYLSHKADFTRPA--EACAKHILLK-- 201
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQF 246
+RL +D K+ S+ G L D P+F
Sbjct: 202 ----------DDATARTVAARLSKGEDFAKVAAEVSEDPGSKGQGGDLGCLAPGDTVPEF 251
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDK---------------RDLGGEIALKAYLSAQ 291
+ K NT TQ G + + + RD A + Y++AQ
Sbjct: 252 DAAVFKGPLNTVQTVKTQFGTHLVVVTKRTDAGLAPLAEAADQIRDTLANEAAQKYINAQ 311
Query: 292 NTPTKIE 298
K+E
Sbjct: 312 LVKVKVE 318
>gi|260663478|ref|ZP_05864368.1| peptidylprolyl isomerase [Lactobacillus fermentum 28-3-CHN]
gi|260552019|gb|EEX25072.1| peptidylprolyl isomerase [Lactobacillus fermentum 28-3-CHN]
Length = 325
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 40/239 (16%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T +G IT+ + + Q NG K +Q++I++ + + ++ G ++ V
Sbjct: 22 VATTSGGKITESEYYSSMK----QTSNG---KQVLQQMILDKVLE---KQYGSKVSTSEV 71
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
N + + + G S FS+ L ++G+ FKQ + + V+N L+ +
Sbjct: 72 NSEYNAYKKEYGSS---FSTVLSEEGLTAKSFKQQIRSNLLLKAAVRNYSTFSSSALKKQ 128
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K+ + E L+ ++ Q I + K+ KL K
Sbjct: 129 W---KKYEPKVQTAEILVG------------SKETAQSIIDTLNNTSGSKLKEFKKLAK- 172
Query: 223 ASKIHDVSIGKAQYLLES------DLHPQFQN---LLKKSQNNTTNPYVTQKGVEYIAI 272
SK D + +L + L ++ LK + TT P T G I +
Sbjct: 173 -SKSTDTTTKSNGGVLSAFDNTDTSLPSAYRKAAFALKTGE-YTTEPVKTDNGYYVIYM 229
>gi|88608000|ref|YP_506608.1| hypothetical protein NSE_0732 [Neorickettsia sennetsu str.
Miyayama]
gi|88600169|gb|ABD45637.1| hypothetical protein NSE_0732 [Neorickettsia sennetsu str.
Miyayama]
Length = 307
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 54/153 (35%), Gaps = 20/153 (13%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-KIAVQE 79
V+ + ++ +S S+++ + + +I++ D+ + + +L +++
Sbjct: 4 VICVVFLLSFLSLPSYSIEVKTAAMVGDVIISNQDVRNYQNFVVMLGEKSDLSYSAVLEQ 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH----FK 135
+I + Q ++ G+ F + L GI F+
Sbjct: 64 MIDLEVCYQYAKRVGLPFSDQKYDAAL---------------KHLRALGINHGAHMALFE 108
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
+YL Q +VV + + + A K+
Sbjct: 109 EYLKKQVFLSEVVDQIIRPRVRIDDSDFDAIKR 141
>gi|254785729|ref|YP_003073158.1| peptidyl-prolyl cis-trans isomerase [Teredinibacter turnerae T7901]
gi|237683903|gb|ACR11167.1| putative PPIC-type PPIASE domain protein, peptidyl-prolyl cis-trans
isomerase [Teredinibacter turnerae T7901]
Length = 624
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/383 (14%), Positives = 117/383 (30%), Gaps = 85/383 (22%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQ 66
+ ++ F ++ I + S +++ ++G IT ++S ++ LL Q
Sbjct: 15 IVSVIVILFFILPMVITGVGSSFLGSVAGTDAAVVDGRSITKKELSREIYMQKQRLLAQQ 74
Query: 67 K--------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGL 115
+ L + ++ L + EK G+ ++N + +
Sbjct: 75 GVDPSADYLKDENLAQPVLERLTRKAAVLAAAEKGGMAVSEKSINGAIVGQEEFKVDGKF 134
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------------------- 150
S++ + S L + G+ +K A + + + K
Sbjct: 135 SSQQYRSLLARVGLTPAAYKAATAEEMMLGQLNKGLELSSFVTEKEKSEIIAIINEKRSF 194
Query: 151 --------DFMLKYGNLEMEIPANKQ-----------------------KMKNITVREYL 179
D + EI A Q +TV E
Sbjct: 195 FTVKIPADDLADSIEVTDAEIAAYYQANEAEFREPEKLSVDYIELSVNSIAATVTVDEAD 254
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL------EKFASKIHDVS--- 230
+R+ ++ I E+S +L + KL A D +
Sbjct: 255 VRSQYEQEAESFDATPELTVAHILLEEDSSAKLTEVQAKLAAGDEFADVAKAYSDDAGSR 314
Query: 231 --IGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G+ L+ F++ + + + P T G +I + K+D+ + ++
Sbjct: 315 DQGGELGVLVAGAFPEAFESAARELGEGEVSGPVKTDSGTHFIKVL-KKDVPEVPSFESR 373
Query: 288 LSAQNTPTKIEKHEAEYVKKLRS 310
+A K+ K E Y+ ++
Sbjct: 374 KAAIERSLKVAKAEGIYLSEMEK 396
>gi|227515601|ref|ZP_03945650.1| peptidylprolyl isomerase [Lactobacillus fermentum ATCC 14931]
gi|227086031|gb|EEI21343.1| peptidylprolyl isomerase [Lactobacillus fermentum ATCC 14931]
Length = 313
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 40/239 (16%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T +G IT+ + + Q NG K +Q++I++ + + ++ G ++ V
Sbjct: 22 VATTSGGKITESEYYSSMK----QTSNG---KQVLQQMILDKVLE---KQYGSKVSTSEV 71
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
N + + + G S FS+ L ++G+ FKQ + + V+N L+ +
Sbjct: 72 NSEYNAYKKEYGSS---FSTVLSEEGLTAKSFKQQIRSNLLLKAAVRNYSTFSSSALKKQ 128
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K+ + E L+ ++ Q I + K+ KL K
Sbjct: 129 W---KKYEPKVQTAEILVG------------SKETAQSIIDTLNNTSGSKLKEFKKLAK- 172
Query: 223 ASKIHDVSIGKAQYLLES------DLHPQFQN---LLKKSQNNTTNPYVTQKGVEYIAI 272
SK D + +L + L ++ LK + TT P T G I +
Sbjct: 173 -SKSTDTTTKSNGGVLSAFDNTDTSLPSAYRKAAFALKTGE-YTTEPVKTDNGYYVIYM 229
>gi|153854234|ref|ZP_01995542.1| hypothetical protein DORLON_01534 [Dorea longicatena DSM 13814]
gi|149753283|gb|EDM63214.1| hypothetical protein DORLON_01534 [Dorea longicatena DSM 13814]
Length = 245
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 88/283 (31%), Gaps = 46/283 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKS 93
M +I T+ G IT+ ++ I L ++ + K ++LI K
Sbjct: 1 MEQKIIATVGGHQITEAEVEAFIHSLPREQQAYAAHPDFRKQCEEQLIA----VYAFAKY 56
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G + E+F + ++ ++ + Q +
Sbjct: 57 GEEEKIDE---------------TEEFKNVMENA-------RKDILAQMAMRKLFA---T 91
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + E++ K K + +L DN+ + + +
Sbjct: 92 VNVTDDEIKEYYEANKSKYSKGASVHAKHILV---DNEEKCTELLNAITSGEKVFE---- 144
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272
+ ++ ++ + G + +F++ + P TQ G I +
Sbjct: 145 ---DVAKESSTCPSGANGGDLGEFGRGQMVKEFEDAAFAAEVGHVVGPVKTQFGYHLIKV 201
Query: 273 CDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
DK++ G K + A+ + K E+ V +L+ +
Sbjct: 202 EDKKEAGESSLEEVKDQIRAELSQKKQEEAYRAKVDELKKKYM 244
>gi|269216505|ref|ZP_06160359.1| putative peptidylprolyl isomerase PrsA3 [Slackia exigua ATCC
700122]
gi|269130034|gb|EEZ61116.1| putative peptidylprolyl isomerase PrsA3 [Slackia exigua ATCC
700122]
Length = 424
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 93/313 (29%), Gaps = 44/313 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQK-----------------INGELEKIAVQEL 80
S + T+NG I + +S +A + +L K +
Sbjct: 46 TSGGVAATVNGTDIGENAVSSYVANFRNLNSLNEDTDWAQWMVDNGYTAEDLRKEVINYY 105
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARN------TGLSAED---FSSFLDKQGI-G 130
+ + L +Q E++ + D + V+ N L+A++ ++ L GI
Sbjct: 106 VSQELVRQAAEQNNVKVDEDAVDEQLNTMKMNYDSDGDGSLNADETASWNKALQAVGIAS 165
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
++ ++ L + ++ + + ++ Q +LF
Sbjct: 166 EDEYRTLLEM-YSLEASLQKAVVPDTAPSDEDMLQYAQMYATAYDGAKKSSHILF----- 219
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+Q Q+ + L + + G + + + ++ + L
Sbjct: 220 ASDDQATAQEVLDKINSGELDFAEAAKQYST--DTASAADGGNVGWDVLNSFVKEYTDAL 277
Query: 251 -KKSQNNTTNPYVTQKGVEYIAICDKRDLG------GEIALKAYLSAQNTPTKIEKHE-- 301
+ + ++ G+ I +I + S + + + K
Sbjct: 278 SGLGEGEVSGLVTSEYGIHIIKCTQVFKTPEEVTSVDQIPSEWLDSIKASLQQANKTSAY 337
Query: 302 AEYVKKLRSNAII 314
+ K +A I
Sbjct: 338 KAWFKDFYDSADI 350
>gi|254468807|ref|ZP_05082213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [beta proteobacterium
KB13]
gi|207087617|gb|EDZ64900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [beta proteobacterium
KB13]
Length = 627
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 13/138 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK----------I 68
+++ F + I SY + S+ ++N IT D + + +L+ +
Sbjct: 19 AIIVVPFALFGIDSYLNSMGSNVTVASVNNFEITAQDFQRSMMVLQERLDAEGQDRSILQ 78
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLD 125
+ E K + L+ L K ++K + ++ N S + + +
Sbjct: 79 SPEFRKSVIDSLVDSQLIKSAVDKYNFRISDDQLSTYIVGMPDFQENGKFSQDRYDQIVQ 138
Query: 126 KQGIGDNHFKQYLAIQSI 143
G+ +Q +
Sbjct: 139 YNGLTPKKLEQQIRGDMA 156
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 36/210 (17%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK-QYLAIQSIWPDVVKNDFM 153
I + + F+ + + F I + K +++ + +
Sbjct: 202 IKVTDDEIKEFYEA-------NTDSF--------IRPDQVKIEFVVYSV-------ANIV 239
Query: 154 LKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ E+ K E +LF + Q+ V+K + A
Sbjct: 240 PNVSVTDEEVKEFYEFNKQNYEGDEERSASHILFMA--DASQSDEEVEKVRQKASNVLKD 297
Query: 212 LPKDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265
+ KD NK E++A + + G + + +F+ ++ ++ T
Sbjct: 298 IKKDPNKFEEYAKDLSQDPESAKNGGSLGFFKRGVMVKEFEESAFTLNKGEISDLVRTDF 357
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
G I + D+ G+ + AQ
Sbjct: 358 GFHIIRL---DDVKGDQVSFKDVKAQVKGE 384
>gi|91205713|ref|YP_538068.1| protein export protein prsA precursor [Rickettsia bellii RML369-C]
gi|157826827|ref|YP_001495891.1| protein export protein prsA precursor [Rickettsia bellii OSU
85-389]
gi|122425481|sp|Q1RI35|PLP_RICBR RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl
cis-trans isomerase plp; AltName: Full=Rotamase plp;
Flags: Precursor
gi|91069257|gb|ABE04979.1| Protein export protein prsA precursor [Rickettsia bellii RML369-C]
gi|157802131|gb|ABV78854.1| Protein export protein prsA precursor [Rickettsia bellii OSU
85-389]
Length = 284
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 90/308 (29%), Gaps = 50/308 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA------LLKLQKING 70
+++ + + S S R+ T G + + I K + K
Sbjct: 1 MKKLSIVLLSVSMLSSIAFADNSDRVVATYTGGEVRESQIMKEFKPQLNLPSGETIKNFD 60
Query: 71 ELEKIAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ +LI L K+E+EKS IT +F L+
Sbjct: 61 DFPPQDQDKLIRIYVNNILLKKEVEKSNITSSK-------------------EFQEKLEN 101
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
Q ++++N + + NK + + +L
Sbjct: 102 A-----------KNQLAQKELLENYVKSNLTDKMFDDEYNKYVTSLKGKEQIKVAHILVK 150
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
++ + K K A+ ++L +K S + IG L P+F
Sbjct: 151 ---SEKEANDLKNKLNKGADFAKLAGESSLDKA----SATNGGVIGYILLNQPGQLVPEF 203
Query: 247 Q-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ N + P T G I + +K+ + I K + +Y+
Sbjct: 204 ENKAFALKVNEVSTPVKTDYGWHIIKVLEKKPVP--IPTKEEAKMTIDNVLAAEILKKYI 261
Query: 306 KKLRSNAI 313
L + A
Sbjct: 262 SDLEAKAD 269
>gi|229084254|ref|ZP_04216537.1| Foldase protein prsA 2 [Bacillus cereus Rock3-44]
gi|228699054|gb|EEL51756.1| Foldase protein prsA 2 [Bacillus cereus Rock3-44]
Length = 283
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 80/257 (31%), Gaps = 39/257 (15%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKS---GITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ +K + + L + + + V+ F + G + F + L
Sbjct: 39 KKDDFDKQLKERYGQDMLYEMMAQDIMTEKYKVSDDEVDKEFKKAKEQFG---DQFKTVL 95
Query: 125 DKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+ + ++ FK + + +K E ++ AN + E +
Sbjct: 96 ESNRLKDEDDFKDQIRFKLAMDKAIKQ------SVTEKDVKANYK-------PEIKASHI 142
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
L + D K N ++K++ + +L K S+ G Y
Sbjct: 143 L--VNDEKTAND--IKKQLDE--------GASFEELAKQHSQDPGSKEKGGDLGYFGPGK 190
Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ +F+ K + + P + G I + DK++L +K + ++
Sbjct: 191 MASEFEEAAYKLNVGEISKPIKSSHGYHIIKLTDKKELKPYDEVKDSIRKDLEEKRLADQ 250
Query: 301 E---AEYVKKLRSNAII 314
+ + A I
Sbjct: 251 TTGQKILLDEF-KKADI 266
>gi|253735279|ref|ZP_04869444.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus TCH130]
gi|253726686|gb|EES95415.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus aureus subsp.
aureus TCH130]
Length = 320
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 82/237 (34%), Gaps = 25/237 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ E L K +K + ++ + + G + F L +QG+ +
Sbjct: 52 KDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGK-DKFEKALQQQGLTAD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ L + +++ + +K + E++ + K +L + K
Sbjct: 111 KYKENLRTAAYHKELLSDK--IKISDSEIKEDSKK------------ASHILIKVKSKKS 156
Query: 193 QNQGFVQK-RIKDAEESRLRLPKDCNKLEKFASKIHDVSI-----GKAQYLLESDLHPQF 246
+G K + AEE + + KD +K + A K + G+ Y+L+ F
Sbjct: 157 DKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDF 216
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ L K + + G I D E K L + K++K+
Sbjct: 217 EKALFKLKDGEVSEVVKSSFGYHVIKADKPTDFNSE---KQSLKEKLVDQKVQKNPK 270
>gi|227524701|ref|ZP_03954750.1| peptidylprolyl isomerase [Lactobacillus hilgardii ATCC 8290]
gi|227088185|gb|EEI23497.1| peptidylprolyl isomerase [Lactobacillus hilgardii ATCC 8290]
Length = 293
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 97/288 (33%), Gaps = 45/288 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+I ++S+ A S+ T NG IT+ + +L +++ + +++
Sbjct: 5 LIVLAGVLMSFTLAACGSKSVATTNGGKITES--AYYSSLKGTSSGKQVFQQMILNKVLE 62
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
++ G + VN F ++ + G S F++ L + G+ + K +
Sbjct: 63 --------KQYGKKVKDSAVNKDFNKYKKQYGSS---FNAVLQQNGMTASQLKDSIRSNL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ V+ + ++ A K +TV + L+ +K
Sbjct: 112 LLQQAVR----DNTKFTDAQLKAQFKSYQPKVTVNQILVS-----------------KKS 150
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQFQN-LLKKSQ 254
+ +L+ K + L K S D + + + L F+ K
Sbjct: 151 TAETVIKQLKAGKSFSSLAKKYST--DTATKNKGGRISAFDNTNTSLDSNFKKAAFKLKN 208
Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
T P TQ G + I + + G ++ L Q ++ +
Sbjct: 209 GEYTKTPVKTQYGYQVIQMVNHPAKGTYKDHESELKTQLVDKRLADSD 256
>gi|153809076|ref|ZP_01961744.1| hypothetical protein BACCAC_03384 [Bacteroides caccae ATCC 43185]
gi|149128409|gb|EDM19628.1| hypothetical protein BACCAC_03384 [Bacteroides caccae ATCC 43185]
Length = 460
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 108/314 (34%), Gaps = 41/314 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGELE 73
L++ +V+Y + + + E I D+ + R+ AL ++ +G+
Sbjct: 7 FRFVVTLVLAVFANVVTYAQDNVVDEVVWVVGDEAILKSDVEEARMDALYNGRRFDGDPY 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAED 119
+ +E+ V+ L + + I + N + Q + ++
Sbjct: 67 CVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMLTNMYIQQIGSREKMEEYFNKTSAQ 126
Query: 120 FSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
L + G+ +Q L + + P V+ F + IP
Sbjct: 127 IRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIP----------- 175
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGK 233
+ ++ + P + V+KR++D + + D + L + S K + G+
Sbjct: 176 TQVEVQIITLQ-PKIPVAEIEDVKKRLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGGE 234
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL--S 289
++ + P + N+ + + ++ G I + +KR G+ ++
Sbjct: 235 CGFMGRGMMDPSYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR---GDRVNTRHILLR 291
Query: 290 AQNTPTKIEKHEAE 303
+ + ++ + A
Sbjct: 292 PKVSEKELTEACAR 305
>gi|322804319|emb|CBZ01869.1| foldase protein PrsA precursor [Clostridium botulinum H04402 065]
Length = 247
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 94/282 (33%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + I +NG+ ITD D+ I ++ + +ELI + +
Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ +A++ EDF L+ K+ L IQ +V+
Sbjct: 49 ---DFELSY-NYAKDMKFDETEDFKKQLEAT-------KKQLLIQIAVSNVLAR---ATV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E + + K + T R +L D++ + ++ + S
Sbjct: 95 SEEESKKYYEENKEEFRTQELITARHILV---DSEEEANSIYEEIKNGLDFS-------- 143
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
EK++ G + P+F+ +L+ + T TQ G I + +
Sbjct: 144 EAAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTEAIKTQFGYHLIIVDNI 203
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + +KA + + K + E+ + LR +
Sbjct: 204 KESMIKPFDEVKAMIDNKLLQEKQNQQYNEFTQNLRDKYTVE 245
>gi|219847928|ref|YP_002462361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aggregans DSM 9485]
gi|219542187|gb|ACL23925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aggregans DSM 9485]
Length = 302
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 66/229 (28%), Gaps = 19/229 (8%)
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ A +G + E + + + F+Q + + + +
Sbjct: 51 KRAIGDGIAN-ALASGQTREQIEQIVVENDLRRQIFEQMIQNELL--LYYARQHGIGVDP 107
Query: 159 LEMEIPANKQKMKNITVREYL--------IRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ ++ + + + E L + VL I N + + + D E S
Sbjct: 108 VALDAVVFNRISNDASPAEVLDQRSVLAREQIVLEIIARNTRADMAHARHILVDDEASAQ 167
Query: 211 RLPKDCNKLEKFAS--------KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
+ D FA+ + G + D P F+ + NT
Sbjct: 168 AILADLQGGANFATLAATRSRDTASAANGGDLGWATRGDFVPAFEEAIFTLPLNTPQIVK 227
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T G + + ++ + QN ++ + ++LR
Sbjct: 228 TDFGFHVVEVLERELQRPFDTFEQLRVRQNAGQFYQETFVPWYEELRRQ 276
>gi|262042477|ref|ZP_06015636.1| peptidylprolyl cis-trans isomerase D [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040181|gb|EEW41293.1| peptidylprolyl cis-trans isomerase D [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 638
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 34/279 (12%)
Query: 43 RTTINGEVITDGDIS-----KRIALLKLQKINGEL----------EKIAVQELIVETLKK 87
+NG+ I G +R + +L EL + + LI E+L
Sbjct: 57 AAKVNGQEIGRGQFENAVASERNRMQQLGDQFSELAANENYMKTMRQQVLNRLIDESLLD 116
Query: 88 QEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
Q + G++ V Q N + FS + + G+ + + Q L Q
Sbjct: 117 QYARELGLSISDEQVKQAIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLTT 176
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++ + +P ++ + ++ ++R ++ + ++
Sbjct: 177 QQLINA-----IAGTDFMLPGESDQLAALVSQQRVVREATINVNALAAKQTASDEEINAF 231
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264
++++ R + A + ES + Q+ + ++ T P +
Sbjct: 232 WQQNQARFMAPEQFRVSYIKM-------DAASMQESASDEEIQSWYDQHKDQFTQPQRNR 284
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
V I K + + L + T ++ +
Sbjct: 285 YSV----IQTKTEADAKAVLAELQKGADFATLAKEKSTD 319
>gi|310658175|ref|YP_003935896.1| ppic-type peptidyl-prolyl cis-trans isomerase [Clostridium
sticklandii DSM 519]
gi|308824953|emb|CBH20991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
sticklandii]
Length = 249
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 97/284 (34%), Gaps = 49/284 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ---KINGELEKIAV-QELIVETLKKQEIEKSGI 95
++ + IT+ D+ + L Q GE K A+ QEL+ + L E +S I
Sbjct: 5 EKVLAKVATHQITESDLEHMLKNLNPQIAANFQGEQGKQALLQELVNQKLFYLEALESSI 64
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ F + K+ Q +++ + +
Sbjct: 65 E-NDAKFQSEFEK-------------------------LKENFVTQYSIQNLINS---VS 95
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+E N+ K I+ ++ +L + D L + + ++ E+ +
Sbjct: 96 VTHEELEAYYNENKEGFISPQKVQASHIL--VSDVSLAEEVKGKLAQGESFEALAKEYSS 153
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
C E+ G E + P+F+ K + + P TQ G I + D
Sbjct: 154 CPSKER---------GGDLGMFGEGQMVPEFEEAAFKMAVGEISEPVETQFGFHIIKVTD 204
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEY---VKKLRSNAIIH 315
K++ G ++ + S EK A Y + L+S +
Sbjct: 205 KQE-SGLLSFEEVRSNLLRNMMAEKQGAIYQNHIADLKSKYNVE 247
>gi|228950070|ref|ZP_04112255.1| hypothetical protein bthur0007_61420 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809597|gb|EEM56033.1| hypothetical protein bthur0007_61420 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 299
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 28/227 (12%)
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG-DNHFKQ 136
Q + + + ++K ++ + G S F+ FL + G+ + K
Sbjct: 58 QRTLDDMITLTVLQK-KYKVSDGEIDDEIKRLKSEFGNS---FNDFLSQNGVNNEEQLKD 113
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + + + + + ++ A ++ K E + +L ++
Sbjct: 114 VIKLD----KLKQKLALEHLKIQDKDLKALYEQKK----PEIRVSHILV-------SDET 158
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ 254
+ + +D L K S+ G Y E D+ FQ+ +K +
Sbjct: 159 LAKDIKSKIDS-----GEDFGSLAKEFSQDIATKEKGGDIGYFKEGDMVQAFQDAARKLK 213
Query: 255 -NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ P T G I + D++ L +K L ++ K++++
Sbjct: 214 VGEVSQPVKTDFGYHVIKLLDEKKLLSFEQMKPQLESELISNKMDQN 260
>gi|311280662|ref|YP_003942893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter cloacae
SCF1]
gi|308749857|gb|ADO49609.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter cloacae
SCF1]
Length = 624
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 72/236 (30%), Gaps = 19/236 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQ 127
L + + LI E L Q + G+ V Q N + F+ + +
Sbjct: 86 TLRQQVLNRLIDEALLDQYAKHLGLAISDQQVKQAIFQTQAFQSNGKFDNDRFNGIVSQM 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ + + Q L Q ++ + +P +++ + ++ ++R ++
Sbjct: 146 GMTADQYAQALRNQLETQQLINA-----IVGTDFMLPGETEQLATLVSQQRIVREATINV 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ Q Q+ E+ + + + E+ Q
Sbjct: 201 DALAAKQQVSDQEISSYYEQHKNEFVSPEQFRVSYIKLDAAA-------MQETASDSDIQ 253
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + Q T P + V I K + + L A + ++ A+
Sbjct: 254 SYYDQHQEQFTQPERVRYSV----IQTKTEADAKAVLDALSKGADFAALAKEKSAD 305
>gi|254708930|ref|ZP_05170741.1| parvulin-like PPIase precursor [Brucella pinnipedialis B2/94]
gi|256030456|ref|ZP_05444070.1| parvulin-like PPIase precursor [Brucella pinnipedialis M292/94/1]
gi|261316430|ref|ZP_05955627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis B2/94]
gi|265987500|ref|ZP_06100057.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis M292/94/1]
gi|261295653|gb|EEX99149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis B2/94]
gi|264659697|gb|EEZ29958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis M292/94/1]
Length = 328
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/280 (18%), Positives = 91/280 (32%), Gaps = 47/280 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ TING+ IT G++ + L Q +E+ + LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALIDIKAMAGEAEKDKLD--- 117
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
++F ++ +L +++ + KN + K +
Sbjct: 118 ----------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKISDA 150
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
++ +K+ E R +L + +A +L L
Sbjct: 151 DVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKFEDL 198
Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKR 276
K +S S G Y E + P+F+ T P TQ G I + D+R
Sbjct: 199 AKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLEDRR 258
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ Q + + E VKKLR I Y
Sbjct: 259 TKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 296
>gi|187734680|ref|YP_001876792.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia
muciniphila ATCC BAA-835]
gi|187424732|gb|ACD04011.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Akkermansia
muciniphila ATCC BAA-835]
Length = 357
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/322 (12%), Positives = 102/322 (31%), Gaps = 31/322 (9%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI--------- 68
+ + + + S+RI + GE +T +S+R+ LK+ +
Sbjct: 30 GFLAGRMDAYLKPLPGPPGDNSARI-AEVYGEPVTANQLSRRMTELKMLRQPPVLDMEGG 88
Query: 69 ---------NGELEKIAVQELIVETLKKQEIEKSGITFD--SNTVNYFFVQHARNTGLSA 117
G+L A +LI +L + + + + + Q
Sbjct: 89 IKLTHELDIPGDLAPRARYDLIGSSLLRLKTSVNDLQLPNRNAEAARAVEQIRSRFDGDT 148
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
E + L Q + F++ +A + + + + ++ +++
Sbjct: 149 EQYLKTLHGQKLTQEQFQKKIAARLKQTEQLYRATAQAAEASDEDLKTYYNLIRDQLTPP 208
Query: 178 YL--IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGK 233
L R + + L + ++ + RL+ + ++L + S+ + G+
Sbjct: 209 DLRKTRHIFLA----TLNREEAQVRQTAETLLERLKAGESFSRLAREFSEDERSAPAGGE 264
Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
++ + L +N ++ G + + +A + ++
Sbjct: 265 LGWISPARAKETLGLALADVPDNRPVLLKSRWGWHLVEASPVKKGKTPSYEEALPALRDA 324
Query: 294 PTKIEKHEAE--YVKKLRSNAI 313
+ K +A Y+ L A
Sbjct: 325 ARSLRKAQAVGLYMDGLFEEAH 346
>gi|308270798|emb|CBX27408.1| hypothetical protein N47_H22300 [uncultured Desulfobacterium sp.]
Length = 632
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 95/357 (26%), Gaps = 98/357 (27%)
Query: 43 RTTINGEVIT--DGD------ISKRIALLKLQKINGELE-----KIAVQELIVETLKKQE 89
+NGEVIT + + + A L L+ K A+ +LIV+ L QE
Sbjct: 41 VAKVNGEVITVREYQEAYNNLVEQIRAKLGTNYNEETLKAFNFKKKALDDLIVKKLLVQE 100
Query: 90 IEKSGITFDSNTV-----------------NYFFVQHARNTGLSAEDF------------ 120
+K + + + + ++F
Sbjct: 101 AKKLKFRVTDDELVKLIGSIKAFQVDGVFNKKEYERVLSRNHTVPDEFEATVRESLIMER 160
Query: 121 -------------SSFLD--------------------KQGIGD-------------NHF 134
+ L+ GI +
Sbjct: 161 LISFITSSVKVSDNEALEWFNWKGASVNVDYVFFTPDKYNGINPSQKELNEYFDKNKESY 220
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEI----PANKQKMKNITVREYLIRTVLFSIPDN 190
+ ++ + + F+ + + E+ N K N E +L I +
Sbjct: 221 RTEKKVKVAYLLFSPDSFITQVKVDDNEVKEYYENNIDKFTNPETVE--ASHILCKIDEG 278
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDL-HPQFQN 248
K+ D ++ + + +K++ G + D+ P
Sbjct: 279 ANPAAVQAAKQKADNVFKMIKEGQPFEELAKKYSDCPSKADGGHLGAFGKKDMVEPFASK 338
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
Q + P +T+ G I + +K + ++ + + K +K +
Sbjct: 339 AFSMKQGEISEPVLTKFGWHIIKVEKVNKEKMLVLKEAESEIRKKLISEKAKKLAYD 395
>gi|307544940|ref|YP_003897419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata
DSM 2581]
gi|307216964|emb|CBV42234.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata
DSM 2581]
Length = 607
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 10/155 (6%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDISKRIALLKLQ-KINGE 71
+ +F +V + +NGE I + ++ + I ++ + E
Sbjct: 20 AVVVAMALFGAESLVGLLGGNDGDSV-AKVNGESIPRQQLELEVQRAIRSGQVPPEQERE 78
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNTGLSAEDFSSFLDKQ 127
L + LI E L Q E+ G+ + ++ V ++ S E F + L
Sbjct: 79 LRSQMLDSLISERLLTQYAEEGGLHLSESQIDQLIVNLPEFQDQDGKFSRELFRNRLSSA 138
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
G F+ L + + + ++ E
Sbjct: 139 GFTPLAFRDQLRADMKRRQLQQGLAVSEFSLESEE 173
>gi|227513558|ref|ZP_03943607.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577]
gi|227083431|gb|EEI18743.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577]
Length = 293
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 99/288 (34%), Gaps = 45/288 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+I ++S+ A S+ T NG IT+ + +L L+++ + +++
Sbjct: 5 LIVLAGVLMSFTLAACGSKSVATTNGGKITES--AYYSSLKGTSSGKQVLQQMILNKVLE 62
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
++ G + VN F ++ + G S F++ L + G+ + K +
Sbjct: 63 --------KQYGKKVKESAVNKDFNKYKKQYGSS---FNAVLQQNGMTASQLKDSIRSNL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ V+ + ++ A K +TV + L+ +K
Sbjct: 112 LLQQAVR----DNTKFTDAQLKAQFKSYQPKVTVNQILVS-----------------KKS 150
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQFQN-LLKKSQ 254
+ +L+ K + L K S D + + + L F+ K
Sbjct: 151 TAETVIKQLKAGKSFSSLAKKYST--DTATKNKGGRISAFDNTNTSLDSNFKKAAFKLKN 208
Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ T P TQ G + I + + G ++ L Q ++ +
Sbjct: 209 GDYTKTPVKTQYGYQVIQMVNHPAKGTYKDHESELKTQLVDKRLADSD 256
>gi|299066735|emb|CBJ37929.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia
solanacearum CMR15]
Length = 637
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/320 (10%), Positives = 93/320 (29%), Gaps = 45/320 (14%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKLQKIN 69
L+ V F + Y + S + VIT ++ R+ L ++
Sbjct: 3 LVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDTRVREQTERLRQMLGAQ 62
Query: 70 GELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL------ 115
+ + + +I + + E ++ ++ + V Q T L
Sbjct: 63 YDPRQFEGPQMRRDVLDGIIQQRVMVNEASRANLSVADSKVRETIEQIPAVTQLRKPDGK 122
Query: 116 -SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
+ + L QG+ + F + + + +V + F+ K + ++Q+
Sbjct: 123 FDTDAYIKLLAAQGMTPDQFDARVRSELVLQQIPQSIVSSAFVPKSLVDRLIEARDQQRE 182
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
++ +LF D + + + + + + + V
Sbjct: 183 ---------VQALLFKPADYAAEVTADDKAIQAYYDAHQQEF-----AVPEQVKAEYVVF 228
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI------AICDKRDLGGEIAL 284
G+ Q + ++ ++ + A +D + A
Sbjct: 229 SGEDMMKQIPVTPEQLKEYYDQNAARF-KTEEQRRAAHILIKLPDNAKPADKDAAKKRAE 287
Query: 285 KAYLSAQNTPTKIEKHEAEY 304
+ + +P + +Y
Sbjct: 288 EVLAEVRKSPGSFAELAKKY 307
Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 11/142 (7%)
Query: 174 TVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-- 230
T + +L +PDN K ++ +KR ++ + P +L K S +
Sbjct: 257 TEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKSPGSFAELAKKYSGDPGSAAQ 316
Query: 231 IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA----- 283
G+ +L + P F+N L K + ++ + G I + + + G +
Sbjct: 317 GGELGFLAKGATVPPFENALFALKQPGDISDVVESDFGFHIIKLEEVKGGGVQSLDAVKP 376
Query: 284 -LKAYLSAQNTPTKIEKHEAEY 304
L+ + Q K + +
Sbjct: 377 ELEREVRTQLANKKYTELADAF 398
>gi|148880128|sp|Q68WG0|PLP_RICTY RecName: Full=Parvulin-like PPIase; AltName: Full=Peptidyl-prolyl
cis-trans isomerase plp; AltName: Full=Rotamase plp;
Flags: Precursor
Length = 282
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 89/305 (29%), Gaps = 52/305 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------ 74
+ +IF V ++S ++ ++ T G + + I + +L +GE K
Sbjct: 4 LSVIFLSVSMLSSIAFCDQDKVVATYKGGEVKESQIMQEFK-PQLNLQSGETIKNFDDFP 62
Query: 75 -IAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++LI L K+E+ KS IT S L+ ++ + K I
Sbjct: 63 LQDQEKLIKIYVNNLLLKEEVAKSSIT-SSKEFQEKLEN--AKNQLAQQELLANYIKSNI 119
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
D F N ++ E + + +L
Sbjct: 120 TDKMFDDEY-----------NKYVDNLKGKE----------------QIKVAHILVKSQK 152
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-N 248
+ + K + + D + IG L P+F+
Sbjct: 153 EANTVKTKLSK-GGNFNKLAEEFSLDKATAS------NGGVIGYIILNQSGQLVPEFENK 205
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
N + P T G I + +K+ + I K + +Y+ L
Sbjct: 206 AFALKVNEVSTPVKTDFGWHIIKVLEKKPVP--IPTKKEAKVTIDNILAAEILKKYISDL 263
Query: 309 RSNAI 313
+ A
Sbjct: 264 EAKAD 268
>gi|71908519|ref|YP_286106.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas
aromatica RCB]
gi|71848140|gb|AAZ47636.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas
aromatica RCB]
Length = 263
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 94/306 (30%), Gaps = 48/306 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+ + + IVS + A ++ T+NG+ I+ + IA + Q E
Sbjct: 1 MFKLSRLAALLVAGAIVSAPALAADKAKAFATVNGQPISQTVYNAFIAEQQAQGAPDSPE 60
Query: 74 KI--AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+EL+ + QE +K G+ N ++ A+ L S ++ I D
Sbjct: 61 LQGAVKEELVRREILAQEAKKKGLDKAPNV--QGQIELAKQAVLIRAYLSDYVKAHPISD 118
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
K E E+ N N+ EY R VL D+
Sbjct: 119 AQLKA-----------------------EYELIKN-----NLGSTEYKARHVLVEKEDDA 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ K K +E ++ G+ + + F L
Sbjct: 151 KAIIAKLDKGEKFSELAKQSKDPGSKD-----------KGGELGWSSPNAYVKPFGEALG 199
Query: 252 K-SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K + T P + G I + D R + + Q ++ VK+LR
Sbjct: 200 KLKKGEYTKTPVKSDFGYHVIQLDDSRPMT--PPPFDQVKPQLQQRAGQQQVENLVKELR 257
Query: 310 SNAIIH 315
A +
Sbjct: 258 GKAKVD 263
>gi|330446589|ref|ZP_08310241.1| PPIC-type PPIASE domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490780|dbj|GAA04738.1| PPIC-type PPIASE domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 630
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 70/208 (33%), Gaps = 25/208 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M ++ + + +++ F + SY + + +N + I+ + +
Sbjct: 1 MMERLREGANSIWVKIILSLIILSFVFAGVGSYLASGNEQ-VAAKVNDKEISQREFEQAY 59
Query: 61 A-------------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
L + K + ++ + L +Q + G+ V
Sbjct: 60 QNQRNQMQQRLGDYFSTLMGNPEYVQQFRKSVLDRMVNDELIEQRATELGLGVSDAQVKQ 119
Query: 105 FFVQH-ARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ A + E ++ L + GI F + + + + F+ + +
Sbjct: 120 AIIEMPAFQVDGVFNNEQYNLTLRRAGISPEQFAESIRKDML-----RQQFLSALQSSDF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPD 189
+ +++ + +E ++RT+ ++ D
Sbjct: 175 ALNNEVDELRKLESQERVVRTLKLNLAD 202
>gi|237816303|ref|ZP_04595296.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus str. 2308 A]
gi|237788370|gb|EEP62585.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus str. 2308 A]
Length = 381
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 111 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 170
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 171 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 200
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 201 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 248
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 249 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 308
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 309 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 349
>gi|302872296|ref|YP_003840932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
obsidiansis OB47]
gi|302575155|gb|ADL42946.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
obsidiansis OB47]
Length = 331
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 107/306 (34%), Gaps = 37/306 (12%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE------------------LIV 82
++ +NGE +T + R LK I + + L
Sbjct: 27 KVVLEVNGEQVTKREYKIRFNTLKENAIQFSSRADILDQVFNGKTYRELLKDELFTILTE 86
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQH----ARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
E L Q+ + I A S F+ +L K G +NHF + L
Sbjct: 87 ELLCLQDARRRNIYLTKQEEEEIKKYIEELKANEEMRSY--FNQYLRKIGSDENHFYRDL 144
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
I + + K + EI KN ++ ++ + + +
Sbjct: 145 HKTRIINKLYSS-ITSKTTVSDSEIVNYYNTNKN----QFKKIKIMDIFLKVENEEEDVQ 199
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYL----LESDLHPQFQN-LLK 251
++ I + S L+ +D KL K ++ V I G Y E++ F+ + K
Sbjct: 200 KREIANKIVSELKKGEDFEKLVKKYTEDESVGITKGIIDYFRKGEKEAEYGSVFEEEVFK 259
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ +N T KG + + D++ + + K + ++ K ++ Y++ L+ +
Sbjct: 260 LAVGQVSNIIKTIKGYHIVKVLDEKYMPLDEV-KGEIQSKLMKQKKDQVFRLYIENLKKS 318
Query: 312 AIIHYY 317
+ I+ Y
Sbjct: 319 SKINVY 324
>gi|299783438|gb|ADJ41436.1| Peptidylprolyl isomerase [Lactobacillus fermentum CECT 5716]
Length = 330
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/238 (18%), Positives = 85/238 (35%), Gaps = 38/238 (15%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T +G IT+ + + Q NG K +Q++I++ + + ++ G ++ V
Sbjct: 27 VATTSGGKITESEYYSSMK----QTSNG---KQVLQQMILDKVLE---KQYGSKVSTSEV 76
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
N + + + G S FS+ L ++G+ FKQ + + V+N L+ +
Sbjct: 77 NSEYNAYKKEYGSS---FSTVLSEEGLTAKSFKQQIRSNLLLKAAVRNYSTFSSSALKKQ 133
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K+ + E L+ ++ Q I + K+ KL K
Sbjct: 134 W---KKYEPKVQTAEILVG------------SKETAQSIIDTLNNTSGSKLKEFKKLAK- 177
Query: 223 ASKIHDVSIGKAQYLLES------DLHPQFQN-LLKKSQNN-TTNPYVTQKGVEYIAI 272
SK D + +L + L ++ TT P T G I +
Sbjct: 178 -SKSTDTTTKSNGGVLSAFDNTDTSLPSAYRKAAFALKTGEYTTEPVKTDNGYYVIYM 234
>gi|194466674|ref|ZP_03072661.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus
reuteri 100-23]
gi|194453710|gb|EDX42607.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus
reuteri 100-23]
Length = 311
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 83/254 (32%), Gaps = 29/254 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T NG IT+ + + K +Q++I
Sbjct: 6 LIAIIAGAALMMPLAACGNKAVATTNGGKITESEYYSSMK-------QTSAGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + + ++ G VN + + G DF+++L Q + + KQ +
Sbjct: 59 LDKVLE---KQYGKEVSDKQVNAQYNTYKSEYG---SDFNAYLQSQNLTEKSLKQQIRSN 112
Query: 142 SIWPDVVKNDFMLKYGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ ++ + + + Q + + ++ + D+ + + F
Sbjct: 113 LLLTAAARHYSHITTKQINKQWTKYQPKVQTATILVGSKSDAEDIINQLNDSSNKYKTFK 172
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ + +S+ + D + KA + L K+ TT
Sbjct: 173 KLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAFKL-------------KTGEYTT 219
Query: 259 NPYVTQKGVEYIAI 272
P T G + I +
Sbjct: 220 TPVKTDDGYQVIYM 233
>gi|296162711|ref|ZP_06845496.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
Ch1-1]
gi|295887027|gb|EFG66860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
Ch1-1]
Length = 250
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 94/275 (34%), Gaps = 36/275 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
I+ EV+ D+S+ I LLKL L +++++ + L +K GIT ++ +
Sbjct: 4 IVRIDDEVV---DVSEFIRLLKLTGQFESL----IEQIVRDKLTVHAAKKQGITVSADEI 56
Query: 103 NYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
Q R GL A D + +LD + + F+ ++
Sbjct: 57 QQRADQFRRVRGLHRATDMNQYLDALNVSLDEFEAFITDGL------------------Y 98
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + +++Y L S + ++ V A+E L D +
Sbjct: 99 QEKMLDEIGNEAAIKDYFA---LNSPKFDAIEVSHIVLDSEGKAKEMISYLHDDPDSFAD 155
Query: 222 FASKIHDV----SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICD 274
A + + G +L L P + + + P+ + + E A+
Sbjct: 156 MAREHSIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTA 215
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K + + A + + + E+V + R
Sbjct: 216 KYPATLDADVAAEVRRLLRESWLIARAQEHVIEAR 250
>gi|301060821|ref|ZP_07201635.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2]
gi|300445070|gb|EFK09021.1| PPIC-type PPIASE domain protein [delta proteobacterium NaphS2]
Length = 635
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 35/302 (11%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTT----INGEVITDGDISKR 59
K+F + L T ++ ++ + I T ING D+ +
Sbjct: 80 KIFNLKQRALDSLITQRLMSQAATELGLAVTEEEIQKAIMTYPAFQING----QFDMRRY 135
Query: 60 IALLKLQK-INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN------ 112
ALL + E EL+ + LK+ I + ++ A
Sbjct: 136 QALLSANHMKPEDFEASITSELLDQKLKQFLFAFLNI--TDQEILEYYT-FANEKVKIGF 192
Query: 113 TGLSAEDFSSFL---------DKQGIGDNHFK--QYLAIQSIWPDVVKNDFMLKYGNLEM 161
EDF + + ++ + +A++ + ++ DF + E
Sbjct: 193 VEFKPEDFKKSVTIEDKAKLKEYFEKNKESYRVPEKIAVRYL--EIDPKDFEGEVEVTEK 250
Query: 162 EIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK- 218
EI + + ++ R +LF + + K+ + + R +D
Sbjct: 251 EIQSYYEYNSDRYSQPKQVKARHILFKFNKDDSEEVKNTVKKKAEKVLEKARKGEDFASL 310
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+K++ G Y ++ F+ + ++ T+ G I + D ++
Sbjct: 311 AKKYSEGPTKSKGGDLGYFKTGEMEKPFEEAAFALKKGEISDLVQTRFGYHIILVEDIKE 370
Query: 278 LG 279
G
Sbjct: 371 AG 372
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 16/117 (13%)
Query: 43 RTTINGEVIT--DGDISKRIALLKLQKINGE-----------LEKIAVQELIVETLKKQE 89
+NGE+I + + + R L+ Q + L++ A+ LI + L Q
Sbjct: 42 VAYVNGELINGPEYEKAYRDMLMSFQARYKDMWNDNLLKIFNLKQRALDSLITQRLMSQA 101
Query: 90 IEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ G+ + + N + + L + F+ + + +
Sbjct: 102 ATELGLAVTEEEIQKAIMTYPAFQINGQFDMRRYQALLSANHMKPEDFEASITSELL 158
>gi|319948816|ref|ZP_08022932.1| SurA domain-containing protein [Dietzia cinnamea P4]
gi|319437523|gb|EFV92527.1| SurA domain-containing protein [Dietzia cinnamea P4]
Length = 246
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 63/200 (31%), Gaps = 18/200 (9%)
Query: 43 RTTINGEVIT--------DGDISKRIALLKLQKINGE---LEKIAVQELIVETLKKQEIE 91
+NG I+ + + ++ + L+++ LI L QE
Sbjct: 52 VAEVNGTEISRDEFLSVFENQYQQMSMQAQMSGQPVDEAQLKELTTDGLIGTELLTQEAG 111
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
GI + A +S ++F + QG+ + Q ++ ++
Sbjct: 112 TRGIEVSDEEIQAELAVFAERNQVSTDEFVEAMGGQGLDRAAVLDQIDKQLRVQKLITDE 171
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ ++ E E+ A +++ +P + ++ + E +
Sbjct: 172 YG-EFEVTEAEVQAAYEQVAQQQAMSGGGEAGGGGLPPLEQVRGQAEEQVRAEQEAGAM- 229
Query: 212 LPKDCNKLEKFASKIHDVSI 231
+L + DV++
Sbjct: 230 -----EELSQKLRADADVTV 244
>gi|319654925|ref|ZP_08008999.1| hypothetical protein HMPREF1013_05621 [Bacillus sp. 2_A_57_CT2]
gi|317393350|gb|EFV74114.1| hypothetical protein HMPREF1013_05621 [Bacillus sp. 2_A_57_CT2]
Length = 288
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 84/258 (32%), Gaps = 26/258 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
++ VL+ + + +K + + G+ IT + ++ ++ + L
Sbjct: 8 MIIAGLVLLNLITLAFLLFKGDGSGEAV-AKVGGDKITR---QEWMSEMETKYGKSTLS- 62
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
ELI + + ++ EK G+ V+ + +F+ + ++ +
Sbjct: 63 ----ELIDQKVIEEAGEKYGVKVSEKAVDLELKMVKT---MYGGNFTDEM-----SEDKW 110
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ + I +++ D + ++ N + + Y I ++ +
Sbjct: 111 RRQIKNNLILEELLTADVSVSEEEMKSYYEQNSSQFQVPDT--YHISQIIVKTKE----- 163
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
++ +K+ +E + + + G E F+ +
Sbjct: 164 --EAEQTLKELDEGSSFSVLAMERSIDEFTASLGGNAGYVSEDDEHIPAEVFEQVKTLKP 221
Query: 255 NNTTNPYVTQKGVEYIAI 272
T P T+ G + +
Sbjct: 222 GKWTKPIKTENGYAVVML 239
>gi|302187980|ref|ZP_07264653.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
syringae 642]
Length = 627
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 69/217 (31%), Gaps = 33/217 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + +HA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDEHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N+ + +I++ ++ RL +
Sbjct: 246 KVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNEEQAKAKIEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G Y + P F+ L +++ + P T G I
Sbjct: 303 DFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
+ L +Q K +
Sbjct: 363 LLGVEAPSVPTFASLKGKLTNDLKSQLVEQKFVEVTK 399
>gi|23097999|ref|NP_691465.1| hypothetical protein OB0544 [Oceanobacillus iheyensis HTE831]
gi|22776223|dbj|BAC12500.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 242
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 10/147 (6%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--------ELEKIAVQELIVETLKKQEIEKSG 94
+NG + + +L+K L+ V L+ + L QE +G
Sbjct: 63 VVVVNGTEVNGTTYNAAYSLVKSMMHQSGQDTSDLEALKDQTVDFLVEQELMLQEANNAG 122
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I + + + F++ L++ + + +FK L + V+ +F +
Sbjct: 123 IEVTDKELEEELKAYKESAN--EGQFTTMLEQLNMTEENFKHQLRYDLTTMEYVEQEFEV 180
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIR 181
+ + E+E N+ ++ + L
Sbjct: 181 EVTDKEVEELYNQMTEQSEGEAQELSE 207
>gi|30262343|ref|NP_844720.1| peptidylprolyl isomerase [Bacillus anthracis str. Ames]
gi|47778036|ref|YP_018981.2| peptidylprolyl isomerase [Bacillus anthracis str. 'Ames Ancestor']
gi|30256974|gb|AAP26206.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. Ames]
gi|47551741|gb|AAT31456.2| peptidylprolyl isomerase PrsA [Bacillus anthracis str. 'Ames
Ancestor']
Length = 298
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G IT+ ++ L+ +
Sbjct: 12 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGES 67
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 68 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLK 114
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 115 NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--- 158
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 159 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 209
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 210 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 269
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 270 QVVNELLKDADI 281
>gi|332141514|ref|YP_004427252.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551536|gb|AEA98254.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 565
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 4/105 (3%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDK 126
+ K + LI E L +Q+ G+ + VQ E F + L +
Sbjct: 20 ADFRKNVLDRLIAEKLIQQQATNMGLRVSDEQIRETIVQMPEFQFGGQFDNERFQAILRQ 79
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG-NLEMEIPANKQKM 170
G F+ YL Q + + + E+E Q+
Sbjct: 80 NGFQVADFRDYLRTQMTQNQLAAALTNSSFALDGEVEQANALQRQ 124
>gi|330444318|ref|YP_004377304.1| hypothetical protein G5S_0644 [Chlamydophila pecorum E58]
gi|328807428|gb|AEB41601.1| conserved hypothetical protein [Chlamydophila pecorum E58]
Length = 359
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/312 (14%), Positives = 107/312 (34%), Gaps = 54/312 (17%)
Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKIN-------------GELEKIAVQE 79
A+ R+ ++ E V+T D+ +++ +L + + ++
Sbjct: 45 TGLAIHDRVLFKVDEENVVTTLDVIQKLNILFYTSYPHLIDSYPARSQYYSAMWPVVLES 104
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGD 131
++ E L + ++ + D TVN + ++ ED +++
Sbjct: 105 ILDEFLMYADAKEKKLDVDPTTVNQEIEKILGRDLTPFYSHFDMTPEDIVKVIERT---- 160
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
L Q + +V++ MLK G ++ ++ + V +Y + T+ +
Sbjct: 161 ------LTAQRVMGMMVRSKAMLKVTPGKIKEAYDKLAREAEKRFVWKYRVLTIKAATES 214
Query: 190 NKLQNQGFVQKRIKDAE--------ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
V R+ + + L ++F ++S Q LLE
Sbjct: 215 LASSIAEKVSTRLNETKCWDKERLLSLVLSQGGQFTCSDEFCRNDDELSESHKQELLEVA 274
Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEK 299
++ L P ++ G + + DK L+A + + ++ +
Sbjct: 275 YPEKWCGL----------PKASKSGYKLFVLVDKSVGSVAPLEELEAQIKQRLFASEAVE 324
Query: 300 HEAEYVKKLRSN 311
E +Y +KLR+
Sbjct: 325 LEKQYKEKLRAR 336
>gi|15893571|ref|NP_346920.1| peptidil-prolyl cis-trans isomerase [Clostridium acetobutylicum
ATCC 824]
gi|15023118|gb|AAK78260.1|AE007541_5 Peptidil-prolyl cis-trans isomerase [Clostridium acetobutylicum
ATCC 824]
gi|325507691|gb|ADZ19327.1| Peptidil-prolyl cis-trans isomerase [Clostridium acetobutylicum EA
2018]
Length = 247
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 87/275 (31%), Gaps = 55/275 (20%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET----LKKQEIEKS 93
M +++ +NG+ IT+ D++ I ++ L + L+ E L + + S
Sbjct: 1 MENKVLAVVNGQEITESDLNATINSFPEERRRQFLNPEGRKRLLDEIVSFELVYNDAKDS 60
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
GI V +++AR L+ F +
Sbjct: 61 GIE--EQEVVKAQIENARKQILTHASLDKI----------FSDIVVAD------------ 96
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+E ANK+ K+ + + +L ++ L K ++ +E +
Sbjct: 97 ---SEVEKYYEANKEMFKDPE--KVAAKHILVQTEEDAL-------KIREEIKEGK---- 140
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAI 272
+++S G + P+F+ + P TQ G I +
Sbjct: 141 TFEEAAAEYSSCPSKERGGDLGAFTRGQMVPEFEEAAFSQEIGEVGAPVKTQFGYHLIKV 200
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
K + ++ P+ + + +++
Sbjct: 201 EG----------KIEPAQRDFPSVKDAIKNRLLQE 225
>gi|325294382|ref|YP_004280896.1| hypothetical protein Dester_0180 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064830|gb|ADY72837.1| hypothetical protein Dester_0180 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 440
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 20/166 (12%)
Query: 1 MTSKVFTSLSDF---IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS 57
M SK+ ++ F + ++ FV IF + S + S T+NGE I + +
Sbjct: 1 MLSKIRKNMRAFSLPLWIVAASFVGTIFLVWGKGSLTGPSGSE--VATVNGEPIDLIEFN 58
Query: 58 KRIALL------------KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+ L + + E++ A+Q LI L +E +K GI V
Sbjct: 59 REYNQLTNQLQQQFGENYRKLFPDKEIKIAALQRLINRKLVLEEAKKEGIQVSDWAVAKR 118
Query: 106 FVQH---ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
++ S E + FL + F+ + + ++
Sbjct: 119 IRSFPFLQKDGKFSEELYKEFLKANRLSPKVFEDKIREDLLIEKIM 164
>gi|215485522|ref|YP_002327953.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
O127:H6 str. E2348/69]
gi|215263594|emb|CAS07924.1| peptidyl-prolyl cis-trans isomerase D (rotamase D) [Escherichia
coli O127:H6 str. E2348/69]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 79/289 (27%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 NLRQQVLNRLIDEALLDQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHF-----KQYLAIQSIWPDVVKNDF-------- 152
G++A+ ++ L Q G+ F LA VV+
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAA 205
Query: 153 ------------------------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ ++++ +Q + + ++ Y +
Sbjct: 206 KQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQ 265
Query: 189 DNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHP 244
+ + K +A+ L D L K S I + G +L ++ +
Sbjct: 266 PQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPD 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|213968838|ref|ZP_03396979.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv.
tomato T1]
gi|301384116|ref|ZP_07232534.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
tomato Max13]
gi|302059522|ref|ZP_07251063.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
tomato K40]
gi|302135027|ref|ZP_07261017.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213926441|gb|EEB59995.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv.
tomato T1]
Length = 627
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 77/223 (34%), Gaps = 29/223 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + ++++ ++ RL +
Sbjct: 246 KVTVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDDQAKAKVEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G + + P F+ L +++ + P T G I
Sbjct: 303 DFAALAKEFSQDPGSSSKGGDLGFAGKGVYDPAFEEALYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +LK LS +E+ E K+L +A
Sbjct: 363 LLGVEAPSVPTFASLKEKLSNDLKSQLVEQKFVEVTKQLEDSA 405
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 21/193 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE IT ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120
Query: 104 YFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+Q + SA+ F + + G F+Q L + + V+ +
Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQFRQMLGQEMLIGQ-VRAGVAGSAFVTD 179
Query: 161 MEIPANKQKMKNI 173
++ A + K
Sbjct: 180 AQVDAFARLEKQT 192
>gi|154148403|ref|YP_001406775.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381]
gi|153804412|gb|ABS51419.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381]
Length = 271
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 109/307 (35%), Gaps = 53/307 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK----LQKINGELEKIAVQ 78
I+F + +V+ S + + T+NG IT+ +I+ +A L + K+ ++K ++
Sbjct: 4 ILFSTLSLVAAVSLNAT--VFATVNGMDITEREIAPIVAGLGPNVDISKLPDNIKKEILE 61
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
I++ L +E + SG+ E F+ L+ L
Sbjct: 62 RSIMQQLLLKEAKDSGVA-------------------KGERFNRELE------------L 90
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
A + + + + + E +I A +K K K + + +L +
Sbjct: 91 AKEMLTIRLWQEEKAKNIKVAENDIKAFYDKNKAKFMQPAQIKAGHILVKT-------EA 143
Query: 197 FVQKRIKDAEESRL-RLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK- 252
+ I D + + L K+ S + G + E + F + K
Sbjct: 144 EAKTIINDLKNFKGDDLVKNFAITAAQKSLEPAARQTGGALGWFSEHQMVKPFYDAAKAL 203
Query: 253 SQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLR 309
+ + P TQ G I D +D +A + + K+++ + K LR
Sbjct: 204 KKGEISLKPVKTQFGYHVILKEDAKDAHQATFSEAKPTIENILKQEKLKETITKEAKDLR 263
Query: 310 SNAIIHY 316
+ A + Y
Sbjct: 264 AKAKVEY 270
>gi|253576879|ref|ZP_04854204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251843746|gb|EES71769.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 376
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 98/275 (35%), Gaps = 24/275 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRI------ALLKLQK 67
L T + + +S++ T G IT+ D +RI + + +
Sbjct: 6 LVTVLAFSVMAGCGKNASSGGKDTSKVIATYEGGEITENEFDREQRIVLALQPQMEQFMQ 65
Query: 68 INGELEKIAVQELIVETLKKQE---IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ + + QE+ E L+ + +++G + + F + L
Sbjct: 66 MEDFRQYLVKQEIAYEYLEAKADEKTKEAGKKKAEEQFDLMKSSYGEEN------FKNML 119
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
D Q + + FK Y+ I+ + + +++ E A KQ +VR L +
Sbjct: 120 DAQKVSEAEFKDYMV--RIYTVMEGERQKISEDDVKKEFEATKQDYTTASVRHIL---IN 174
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE-SDLH 243
F+ PD K + + K K+ + + ++++ G +E S+
Sbjct: 175 FTDPDGKERTEEETLKLAKEVKAKLDKGEDFAALAKQYSEDPGSKDNGGLYENVEVSNWV 234
Query: 244 PQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
F+ L + N +P T+ G I + + +
Sbjct: 235 EAFKQAALTQPLNQIGDPVKTEYGYHIIRVESRTE 269
>gi|226324373|ref|ZP_03799891.1| hypothetical protein COPCOM_02154 [Coprococcus comes ATCC 27758]
gi|225206821|gb|EEG89175.1| hypothetical protein COPCOM_02154 [Coprococcus comes ATCC 27758]
Length = 245
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 89/280 (31%), Gaps = 40/280 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + I G IT ++ IA L ++ ++ + + + + K G
Sbjct: 1 MEKTVEAVICGHEITSAEVDAFIASLPREQQVYASHPDFRKQCVDQLIAVYALAKYG--- 57
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ E F + L+ ++ + Q + + +
Sbjct: 58 EEEKLDE------------TEKFKAILENA-------RKDILAQMAIGKIFEGIIISDEE 98
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E + K +V + +L D++ + ++ + + +
Sbjct: 99 IREYFEANKARFAKGASV---HAKHILV---DSEDKCNKLLESIVSGGKAFE-------D 145
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
++ ++ + G + + +F++ + P TQ G I + DK+
Sbjct: 146 VAKESSTCPSGANGGDLGEFGKGQMVKEFEDAAFAAEIGHVVGPVKTQFGYHLIKVEDKK 205
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + + S + E + A+ V+ L+ +
Sbjct: 206 EAEDAKLDDVKEQIKSEIMQKKQQEAYTAK-VEALKKKYM 244
>gi|86130559|ref|ZP_01049159.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134]
gi|85819234|gb|EAQ40393.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134]
Length = 484
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 82/289 (28%), Gaps = 24/289 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK-----IAVQELIVETLKKQEIEKSG 94
+ + +I + DI L K G+ + L+ L + +
Sbjct: 62 DGVAGVVGEYLILESDID---KFLSDIKNQGQAASEVTPCQVMGNLLESKLLAHQAVQDS 118
Query: 95 ITFDSN----TVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ V+ + + G +F + + F + I +++
Sbjct: 119 LIVQDARVNSEVDQIIQRFSSQLGSEQKVVEFYKKDNMADLRAELFG--IRKDIILSELM 176
Query: 149 KNDFMLKYGNLEMEI----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + E+ + + E I ++ ++ + Q + +
Sbjct: 177 NDKIIETVDVTPDEVKTFFESIPEDQVPTVGVELEISRIVIEPKASEEERQKVIDRLKGF 236
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQFQNL-LKKSQNNTTNPYV 262
+ K + S G + + L +F+++ + P+
Sbjct: 237 RRDILENGSSFATKAVLYTQDPGSRSEGGLMVIDRNTPLVKEFRDVAFSLQDGEISEPFE 296
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T+ G + + R +I + L E+ + VK +R
Sbjct: 297 TEFGFHIVYVEKTRGERKDI--RHILLVPEIKEAQEEEAKDLVKLVRKR 343
>gi|300997370|ref|ZP_07181710.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1]
gi|300304189|gb|EFJ58709.1| PPIC-type PPIASE domain protein [Escherichia coli MS 200-1]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G ++ ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWVEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|237725280|ref|ZP_04555761.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D4]
gi|265754206|ref|ZP_06089395.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA]
gi|229436546|gb|EEO46623.1| peptidyl-prolyl cis-trans isomerase [Bacteroides dorei 5_1_36/D4]
gi|263234915|gb|EEZ20470.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA]
Length = 456
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 37/288 (12%)
Query: 14 KLLTTYF-VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKING 70
KL+ T L++ + Y + + + E I D+ + A + +K +G
Sbjct: 3 KLMCTKVYALVLMLFAAVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDG 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------S 116
+ I ++L ++ L + I + N+ Q + +
Sbjct: 63 DPYCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKT 122
Query: 117 AEDFSSFLD---KQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ L + G +Q + I P V+ F + IP
Sbjct: 123 STQIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIP-------- 174
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-- 230
+ ++ + P + V+K ++D E + L + S+
Sbjct: 175 ---TQVEVQIITME-PKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRR 230
Query: 231 IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
G+ ++ ++L P++ N+ + N + ++ G I + +KR
Sbjct: 231 GGELGFMGRAELVPEYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR 278
>gi|237752063|ref|ZP_04582543.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376630|gb|EEO26721.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 271
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 106/301 (35%), Gaps = 44/301 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQE 79
I+ V + A ++ +NG ITD DI+ + + ++ E + + +
Sbjct: 4 ILASSVIAFALLQGASFAKTYAEVNGADITDRDIATLMRAMPGVAFDQLPSEAKTQVINQ 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L ++ +K + +S S E+ + ++
Sbjct: 64 AIERKLLIEQAKKEKVQ-NSKEYKEAVA--------SVEEDL-----------MLEIWMR 103
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q +K + E+ N+ K K + +L + ++ +
Sbjct: 104 KQMD---------KVKVLDSEITKFYNENKSKFVQPETIKASHILVT-------SESEAK 147
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKKSQNN-- 256
I + +++ + + L + SK + G+ Y+ ++ + P+F N K Q
Sbjct: 148 AIIAELKKAGKNVAGKFDSLAREKSKDGSAQNGGELGYIAKNQVVPEFANAAFKLQKGAY 207
Query: 257 TTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
TT P +Q G I + DK+ G +K + K ++ + ++LR A I
Sbjct: 208 TTTPVKSQFGYHVILVEDKKPAGTIALKDIKGQIEQNLKLKKFQEEIKKEGEELRKKAKI 267
Query: 315 H 315
Sbjct: 268 E 268
>gi|157374684|ref|YP_001473284.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis
HAW-EB3]
gi|157317058|gb|ABV36156.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sediminis
HAW-EB3]
Length = 621
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 20/174 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSYLGSSTEAA-AATVNGEEISESALEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV-N 103
R L + + +++ ++ L+ E L Q G+ + N
Sbjct: 60 QNERARLEQQLGEMFAALSADERYLSSVKQSVLERLVAEKLLDQTATDLGLRVSDAQIKN 119
Query: 104 YFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ A T + + + L + G N F+ + +V + +
Sbjct: 120 AIMTEPAFQTDGVFDNDRYQAILRQLGYQANSFRDMMRTDMTRRQLVASLVGSE 173
>gi|91779615|ref|YP_554823.1| putative peptidyl-prolyl isomerase [Burkholderia xenovorans LB400]
gi|91692275|gb|ABE35473.1| putative peptidyl-prolyl isomerase [Burkholderia xenovorans LB400]
Length = 250
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 30/256 (11%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K+ G+ E + +++++ + L +K GIT ++ + Q R GL A D
Sbjct: 17 FIRLLKLTGQFESL-IEQIVRDKLTVHAAKKQGITVSADEIQQRADQFRRVRGLHRATDM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ +LD + + F+ ++ + + +++Y
Sbjct: 76 NQYLDALNVSLDEFEAFITDGL------------------YQEKMLDEIGNEAAIKDYFA 117
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQY 236
L S + ++ V A+E L D + A + + G
Sbjct: 118 ---LNSPKFDAIEVSHIVLDSEGKAKEMISYLHDDPDSFADMAREHSIADTREAGGVIGK 174
Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+L L P + + + P+ + + E A+ K + + A +
Sbjct: 175 VLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPATLDADVAAEVRRLLR 234
Query: 294 PTKIEKHEAEYVKKLR 309
+ + E+V + R
Sbjct: 235 ESWLIARAQEHVIEAR 250
>gi|330963316|gb|EGH63576.1| periplasmic folding chaperone [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 627
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 29/223 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + ++++ ++ RL +
Sbjct: 246 KVTVKDDDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKVEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
L K S+ S G + + P F+ L +++ + P T G I
Sbjct: 303 SFAALAKEFSQDPGSSSKGGDLGFAGKGVYDPAFEEALYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +LK LS +E+ E K+L +A
Sbjct: 363 LLGVEAPSVPTFASLKEKLSNDLKSQLVEQKFVEVTKQLEDSA 405
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 21/193 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE IT ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120
Query: 104 YFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+Q + SA+ F + + G F+Q L + + V+ +
Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQFRQMLGQEMLIGQ-VRAGVAGSAFVTD 179
Query: 161 MEIPANKQKMKNI 173
++ A + K
Sbjct: 180 AQVDAFARLEKQT 192
>gi|225628141|ref|ZP_03786176.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti str. Cudo]
gi|225616966|gb|EEH14013.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti str. Cudo]
Length = 381
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 111 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 170
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 171 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 200
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 201 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 248
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 249 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 308
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 309 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 349
>gi|323528886|ref|YP_004231038.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
gi|323385888|gb|ADX57978.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
Length = 250
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 90/253 (35%), Gaps = 24/253 (9%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K+ G+ E + +++++ + L +K GI ++ + Q R GL A D
Sbjct: 17 FIRLLKLTGQFESL-IEQIVRDKLTVHAAKKQGIVVTADEIQERADQFRRVRGLHRATDM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ +LD + + F+ ++ + K + E+ A + + ++
Sbjct: 76 NQYLDVLNVSLDEFEAFITDGL---------YQEKMLD-EVGNDAAVRDYFALNSPKFDA 125
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLE 239
V + D++ + + + D P + + S + G +L
Sbjct: 126 IEVSHIVLDSEGKAKEMISYLHDD--------PDSFADMAREHSIADTREAGGVIGKVLR 177
Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
L P + + + P+ + + E A+ K + + A + +
Sbjct: 178 GSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPATLDADVAAEVRRLLRESW 237
Query: 297 IEKHEAEYVKKLR 309
+ E+V + R
Sbjct: 238 LIARAQEHVIEAR 250
>gi|212690536|ref|ZP_03298664.1| hypothetical protein BACDOR_00018 [Bacteroides dorei DSM 17855]
gi|237708008|ref|ZP_04538489.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA]
gi|212666885|gb|EEB27457.1| hypothetical protein BACDOR_00018 [Bacteroides dorei DSM 17855]
gi|229457994|gb|EEO63715.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA]
Length = 456
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 37/288 (12%)
Query: 14 KLLTTYF-VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKING 70
KL+ T L++ + Y + + + E I D+ + A + +K +G
Sbjct: 3 KLMCTKVYALVLMLFAAVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDG 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------S 116
+ I ++L ++ L + I + N+ Q + +
Sbjct: 63 DPYCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKT 122
Query: 117 AEDFSSFLD---KQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ L + G +Q + I P V+ F + IP
Sbjct: 123 STQIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIP-------- 174
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-- 230
+ ++ + P + V+K ++D E + L + S+
Sbjct: 175 ---TQVEVQIITME-PKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRR 230
Query: 231 IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
G+ ++ ++L P++ N+ + N + ++ G I + +KR
Sbjct: 231 GGELGFMGRAELVPEYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR 278
>gi|260904425|ref|ZP_05912747.1| SurA-like protein [Brevibacterium linens BL2]
Length = 254
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 20/198 (10%)
Query: 41 RIRTTINGEVITDGDI-----------SKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
++ +NGE IT D + Q +L+ + L+ L QE
Sbjct: 57 KVVAEVNGEKITKDDFVPLYETQYQQMQMQSQQSGQQVDEKQLKTQTAENLVSTELLSQE 116
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
EK I V+ + A+++ +S +DF + + KQG+ + L Q ++K
Sbjct: 117 AEKRDIKVSDKDVDKGLEESAKSSQMSKKDFLAAMKKQGMDEKKVHAELKTQLAIEGLIK 176
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+++ + E A +Q +P + ++
Sbjct: 177 DEYGEFKASGEDIGQAYQQAKTQQEQMAQQSGQQAQEVPSLEEMRPQLEEQ--------- 227
Query: 210 LRLPKDCNKLEKFASKIH 227
++ K +KFA K+
Sbjct: 228 VKSQKSTEATQKFAKKLR 245
>gi|292490958|ref|YP_003526397.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
halophilus Nc4]
gi|291579553|gb|ADE14010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
halophilus Nc4]
Length = 250
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 26/250 (10%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
I+ EVIT A LK K+ G E++ ++E++ + LK ++ G++ ++ +
Sbjct: 4 IVRIDDEVITAD------AFLKTLKLTGRFEEL-IEEMVRDKLKVHAAKRQGVSLTTDEI 56
Query: 103 NYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
Q R GL A+D + FLD G+ + F+ ++ I+ ++ + + E
Sbjct: 57 QERADQFRRVYGLHRAKDMNQFLDAIGVSLDDFENFI-IEILYQEKIMAKVCSDDAIEEY 115
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+M + + ++ + F + L
Sbjct: 116 F------RMHSPKFESIELGHIVL--DSEGKAKEIFSLLEEEPELFPELAKEHSIADTRD 167
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLG 279
+ V G Q +ES + P+ + G E + K +
Sbjct: 168 HHGMVGKVLRGSLQTDIES-------KVFNAPVGEPLGPFASSDGSFFEIFQVTAKHEAK 220
Query: 280 GEIALKAYLS 289
+ K+ +
Sbjct: 221 LDEETKSEVR 230
>gi|158423053|ref|YP_001524345.1| putative peptidyl-prolyl cis-trans isomerase [Azorhizobium
caulinodans ORS 571]
gi|158329942|dbj|BAF87427.1| putative peptidyl-prolyl cis-trans isomerase [Azorhizobium
caulinodans ORS 571]
Length = 304
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 91/287 (31%), Gaps = 55/287 (19%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKI----AVQELIVETLKKQEIEKSGITFDS 99
++NG I+ I+ ++Q + A L+V L QE + G++ D
Sbjct: 45 VSVNGVAISRKAIAA-----EVQNAPAKTPAEGWFNATLALVVRELLLQEAHRLGLSADP 99
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
L+ G ++ +++ +
Sbjct: 100 R-----------------------LEADG----------RRETEEEALIRALLAQEVRTP 126
Query: 160 EMEIPANKQ-----KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E + A ++ + + ++ + +L + ++R + R P+
Sbjct: 127 EADEAALRRFYDNNRRRFLSAPLWEAEHILCAARREDAVAFPAARERAQTLAAVLARAPE 186
Query: 215 DCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
+L + + G + D P+F+ LK + + P T+ GV I +
Sbjct: 187 RFAELARAQSDCPSAGVGGSLGQIGPGDTTPEFEAALKALTPGVISEPVETRYGVHLIRV 246
Query: 273 CDKRDLGGEI----ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + G A++ ++A A+YV L A I
Sbjct: 247 --NRHVDGRTLPFEAVRDQIAAYLADHVTRAAHAQYVALLIGRADIQ 291
>gi|300930256|ref|ZP_07145669.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1]
gi|300461828|gb|EFK25321.1| PPIC-type PPIASE domain protein [Escherichia coli MS 187-1]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|320178277|gb|EFW53251.1| Peptidyl-prolyl cis-trans isomerase ppiD [Shigella boydii ATCC
9905]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|28870877|ref|NP_793496.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28854126|gb|AAO57191.1| peptidyl-prolyl cis-trans isomerase D, putative [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331019234|gb|EGH99290.1| periplasmic folding chaperone [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 627
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 77/223 (34%), Gaps = 29/223 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V + QHA+ +S E Y+ ++ K+ F
Sbjct: 207 VKVTDDEVKAHYDQHAKEF-MSPEQV-------------VLDYI-------ELKKSSFFD 245
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ A QK + +L + N N + ++++ ++ RL +
Sbjct: 246 KVTVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDDQAKAKVEEIQQ-RLAKGE 302
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D L K S+ S G + + P F+ L +++ + P T G I
Sbjct: 303 DFAALAKEFSQDPGSSSKGGDLGFAGKGVYDPAFEEALYALNKDQVSQPVRTDFGWHLIK 362
Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +LK LS +E+ E K+L +A
Sbjct: 363 LLGVEAPSVPTFASLKEKLSNDLKSQLVEQKFVEVTKQLEDSA 405
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 21/193 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + I + + + + +NGE IT ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGIIIALMAFTGIEAMFTATSNKQNAAEVNGEDITQNELSQAV 60
Query: 61 ALLKLQKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ + Q L + A++ LI L Q + +F ++
Sbjct: 61 DMQRRQLAQQLAQQLGKDFDPAMLDEKLLRESALKGLIDRKLLLQGAGDARFSFSDAALD 120
Query: 104 YFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+Q + SA+ F + + G F+Q L + + V+ +
Sbjct: 121 QQLLQTPEFQVDGKFSADRFDQVIRQLGYSRMQFRQMLGQEMLIGQ-VRAGVAGSAFVTD 179
Query: 161 MEIPANKQKMKNI 173
++ A + K
Sbjct: 180 AQVDAFARLEKQT 192
>gi|15597002|ref|NP_250496.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PAO1]
gi|107101237|ref|ZP_01365155.1| hypothetical protein PaerPA_01002270 [Pseudomonas aeruginosa PACS2]
gi|9947788|gb|AAG05194.1|AE004606_8 peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PAO1]
Length = 621
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 27/221 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + V F+ H ++ E + ++ + ++ K+ F +
Sbjct: 204 SVSDDEVKAFYEGHKSEF-MTPEQ------------------VVVEYV--ELKKSSFFDQ 242
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ A QK + +L + N + +I + + +
Sbjct: 243 VKVKQEDLEALYQKEIANLSEQRDAAHILIEV--NDKVGDEQAKAKIDEIKARLAKGEDF 300
Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273
++F+ I + G Y P F+ L Q + P T G I +
Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360
Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ ++ +LK L + +E+ E K L S+A
Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSA 401
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + S + +NG+ I+ ++ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + LQ++ + L++ A++ LI TL Q + F ++ +
Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + +A+ F + + F+Q L + + + + + E+
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQL-RAGLAGTGFVTDNELQ 179
Query: 165 ANKQKMKNI 173
+ + K
Sbjct: 180 SFARLEKQT 188
>gi|258649206|ref|ZP_05736675.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella tannerae
ATCC 51259]
gi|260850471|gb|EEX70340.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella tannerae
ATCC 51259]
Length = 452
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 90/289 (31%), Gaps = 18/289 (6%)
Query: 17 TTYFVLIIFCIVPIVSYK--SWAMSSRIRTTINGEVITDGDISK-RIALLKLQKINGELE 73
+LI+F + S + + + + I D+ + R+ +
Sbjct: 1 MRKVILILFGCWALCSQAQRPRNVVDEVIWVVGDDPIYLSDVEQARLYAESEGQALENPY 60
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--TGLSAEDFSSFLDKQGIG- 130
I +++ ++ L + E IT + + + +++ + + I
Sbjct: 61 CIIPEQIAIQKLYLHQAEIDSITVSEGDIIRAADEIINRYIQNIGSKEGVEAVMHKSISQ 120
Query: 131 -DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
FK+ + + K E+ + + ++ + + I
Sbjct: 121 LREDFKRSQRDRMRIQRE-QQRITEKVAITPAEVREYFKNLPADSLPLIPTQVEVEIITA 179
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKD---CNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ V++ R+ + L +F S+ S G+ Y+ L P
Sbjct: 180 QPQPTRAEVERIENKLRSFADRVNSGETEFSTLARFYSQDPGSSRNGGEMDYMGRGQLVP 239
Query: 245 QFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+F N+ + T+ G I + DKR G+ ++ +
Sbjct: 240 EFANVAFSLSDPKKVSKIVKTEFGYHIIQLVDKR---GDKVKVRHILLK 285
>gi|148547507|ref|YP_001267609.1| SurA domain-containing protein [Pseudomonas putida F1]
gi|148511565|gb|ABQ78425.1| SurA N-terminal domain [Pseudomonas putida F1]
Length = 213
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 19/197 (9%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVI---------TDGDISKRIALLKLQKING---ELEK 74
+ ++ S + + +NG I ++ + + + + G L
Sbjct: 6 LCLLLVLTSVSWADVPAARVNGVEIGLMRLERYFSEY-LDAQGRAVTSIRNPGLYKRLRD 64
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A+ ELI + L QE ++ GI V+ + G S F L + G +
Sbjct: 65 QALDELIDKELLWQEAQRQGIAVSDEHVSAQIGEIEAAFG-SPALFERRLAEAGFDRAQY 123
Query: 135 KQYLAIQSIWPD---VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+Y + ++ G +E AN+Q+++ + +
Sbjct: 124 TEYTRHEMAAQQVYALLSAVDAPSQGEVEAFYDANQQRLQGAQNQSDN--PSVIREHGLA 181
Query: 192 LQNQGFVQKRIKDAEES 208
L + +R A +S
Sbjct: 182 LARATLIGQREAQARQS 198
>gi|149378497|ref|ZP_01896176.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola
DG893]
gi|149357219|gb|EDM45762.1| Parvulin-like peptidyl-prolyl isomerase [Marinobacter algicola
DG893]
Length = 608
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/390 (12%), Positives = 105/390 (26%), Gaps = 89/390 (22%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------GDISKRIALLKLQ 66
I + +++ I + + T+NGE IT+ I + L +++
Sbjct: 12 IAKIIIGLLIVSLSIWGMDAIVGGFSGEPEVATVNGEDITEREFLRVVQIESQRRLSEME 71
Query: 67 KINGEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSA-- 117
+ L + + LI + + E G+ ++ Q + +
Sbjct: 72 NPDPSLLDEDQVRQDVLDALIQQKVMTLNAEDQGLELSDADIDSLITQMPQFQVDGTFNR 131
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
+ F S + G+G F++ + Q + ++ + + +
Sbjct: 132 DRFVSAVRNMGMGVAEFRETMRKQYVVNQ-IRAGISQSGVVTDENVAQLLRIQNQTRNFR 190
Query: 178 -----------------------YLIRTVLFSIPDNKLQN------QGFVQKRIKDAEES 208
Y F +P++ + + E+
Sbjct: 191 VTTLSADAVSDQVEVTDADVEAYYDENKEAFKLPESVDASYIVLSLAALAETIEISDEQL 250
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGK----------------------------------- 233
R + ++L + + + I
Sbjct: 251 RDYYEQRASELMREERRASHILIEDGENAEETMATIQERLAGGESFAALAEEFSVDTVSA 310
Query: 234 -----AQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
+ P F++ L + + P T GV I + D + E A
Sbjct: 311 EQGGDLGFAERGVYDPAFEDALFALEEGEVSEPVSTSFGVHLIKLEDVQKT--EAPPLAE 368
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN-AIIHY 316
L Q ++ E ++RS A + Y
Sbjct: 369 LEDQLRRELAQREATERFAEVRSELADLAY 398
>gi|194437396|ref|ZP_03069493.1| peptidylprolyl isomerase [Escherichia coli 101-1]
gi|253774568|ref|YP_003037399.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160511|ref|YP_003043619.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
B str. REL606]
gi|194423565|gb|EDX39555.1| peptidylprolyl isomerase [Escherichia coli 101-1]
gi|242376223|emb|CAQ30914.1| periplasmic folding helper protein [Escherichia coli BL21(DE3)]
gi|253325612|gb|ACT30214.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972412|gb|ACT38083.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
B str. REL606]
gi|253976622|gb|ACT42292.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
BL21(DE3)]
gi|323972295|gb|EGB67505.1| ppic-type ppiase domain-containing protein [Escherichia coli TA007]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|157803578|ref|YP_001492127.1| protein export protein PrsA precursor [Rickettsia canadensis str.
McKiel]
gi|157784841|gb|ABV73342.1| Protein export protein PrsA precursor [Rickettsia canadensis str.
McKiel]
Length = 282
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 91/304 (29%), Gaps = 50/304 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------RIALLKLQKINGELEK 74
+ +IF V ++S ++A ++ T G + + I K I + K +
Sbjct: 4 LSVIFLSVSMLSSIAFADKDKVVATYKGGEVKESQIMKEFKPQLNIQSGETIKSFDDFSL 63
Query: 75 IAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++LI L K+E+ KS IT +F L+
Sbjct: 64 QDQEKLIKIYVNNLLLKEEVAKSHITASK-------------------EFQEKLENA--- 101
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
Q +++ N + + NK + + +L +
Sbjct: 102 --------KNQLAQQELLANYIKSNITDKMFDDEYNKYVGNLKGKEQIKVAHILVK---S 150
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249
+ + K K ++L +K S + IG L P+F +
Sbjct: 151 QKEANEIKTKLSKGGNFTKLAEELSLDKA----SASNGGVIGDIILNQPGQLVPEFEKKA 206
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
N + P T G I + +K+ + I K +Y+ L
Sbjct: 207 FALKVNEVSTPVKTDFGWHIIKVLEKKPVP--IPTKEDAKVTIDNILAAAILKQYISDLE 264
Query: 310 SNAI 313
+ A
Sbjct: 265 AKAD 268
>gi|323963431|gb|EGB58993.1| ppic-type ppiase domain-containing protein [Escherichia coli H489]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|300903291|ref|ZP_07121219.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1]
gi|301301592|ref|ZP_07207727.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1]
gi|300404586|gb|EFJ88124.1| PPIC-type PPIASE domain protein [Escherichia coli MS 84-1]
gi|300843089|gb|EFK70849.1| PPIC-type PPIASE domain protein [Escherichia coli MS 124-1]
gi|315256269|gb|EFU36237.1| PPIC-type PPIASE domain protein [Escherichia coli MS 85-1]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|218781789|ref|YP_002433107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
gi|218763173|gb|ACL05639.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfatibacillum
alkenivorans AK-01]
Length = 624
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 46/131 (35%), Gaps = 2/131 (1%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKA 234
++ R +L S+ + + + + E++ + +D + ++F+ + G
Sbjct: 260 QQVHARHILISLAKDAPEEKAAEALKKAQEIEAKAKAGEDFAELAKEFSDGPTAKNGGDL 319
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ F++ + ++P T G I + + ++ + + S ++
Sbjct: 320 GSFPRGRMVKPFEDAAFALNAGEISDPVRTDFGFHIIKVEEIKEARTKELSEVEDSIRSK 379
Query: 294 PTKIEKHEAEY 304
+ Y
Sbjct: 380 LAADVALDEAY 390
>gi|309388964|gb|ADO76844.1| SurA domain protein [Halanaerobium praevalens DSM 2228]
Length = 425
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 76/232 (32%), Gaps = 26/232 (11%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----ISK 58
S++ L +++ F+ + ++ + +NG I+ + + +
Sbjct: 9 SRIIVYLVVIAFVISGGFMGYGAYLNNRGGGQAPNQGPAVIAEVNGMEISQQEYYSMLQQ 68
Query: 59 RIALLKLQKING-ELEKIAVQELIVETLKKQEIEKSGI--TFDSNTVNYFFVQHARNTGL 115
+ L ++ LI L + E+ I + V+ + +
Sbjct: 69 QAPNSSLSSSQIIPFRYQVLEALIERKLILAKAEEFDIQVEVSDSEVDENYNNILEQNEI 128
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
+ ++ + L +QG ++ + N + A Q + + V
Sbjct: 129 TDQELAETLAEQGSTIGELRENIK--------------DSLQNTKTLTEAINQGVGKVEV 174
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
+ I+ + N+ + + + + E S+ + KLE+ +S +
Sbjct: 175 SDQEIQKLY-----NQRYLKVETESKKTETENSKQKESDSEPKLEEVSSDLK 221
>gi|157159968|ref|YP_001457286.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
HS]
gi|312970538|ref|ZP_07784719.1| PPIC-type PPIASE domain protein [Escherichia coli 1827-70]
gi|157065648|gb|ABV04903.1| peptidylprolyl isomerase [Escherichia coli HS]
gi|310337187|gb|EFQ02325.1| PPIC-type PPIASE domain protein [Escherichia coli 1827-70]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQKISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|323191361|gb|EFZ76624.1| PPIC-type PPIASE domain protein [Escherichia coli RN587/1]
Length = 623
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|260773190|ref|ZP_05882106.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio metschnikovii CIP
69.14]
gi|260612329|gb|EEX37532.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio metschnikovii CIP
69.14]
Length = 619
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 52/150 (34%), Gaps = 12/150 (8%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FL 124
L + + +I + L +Q + G+ N V A SA F L
Sbjct: 85 ASLRRSVLDSMINDILIEQHAQSLGLRVSDNQVRQAI--IAMPEFQSAGQFDQNIYQSAL 142
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G + F +Y+ +V++ + E +P + + + + +RT+
Sbjct: 143 RRAGFTPDAFAEYMR-----RSLVRDQLVAALQTSEFTLPGEVEGLSALVAQARDVRTIT 197
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
D Q Q+ + +++ R +
Sbjct: 198 LPTTDFAKDVQLTDQEIEQYYQQNDDRYTR 227
>gi|171914423|ref|ZP_02929893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verrucomicrobium
spinosum DSM 4136]
Length = 299
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 99/287 (34%), Gaps = 18/287 (6%)
Query: 43 RTTINGEVITDGDISKRIALLK------LQ----KINGELEKIAVQELIVETLKKQEIEK 92
INGE I D I + +K LQ + + E +A L L +QE +
Sbjct: 2 ALIINGETIDDEIIEEEFRHIKGHYERALQVSCCERDPEFRGMAKDNLASRALLQQESRR 61
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ G E F + ++ + LA +++N +
Sbjct: 62 RFPEVSEGEAKARLEKLIEQAG-GEEQFYMSIGMPFKDESLLQDNLANGVRMDKMLQNVY 120
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ E +I A + + E IR S+ + +++ V + +++ E ++
Sbjct: 121 SPEPEPGEADIQAYYEANVKHFLSEEQIRVSHISLNLSGARSRAEVYQTMRELRE-QVLG 179
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D + L + D+S + + + +F+ + + + TQ G
Sbjct: 180 GADFDALAAEHNSNKDMSP-DLGWFKKGEFMEEFEAIAFSMRDGEISPVFTTQLGFHICR 238
Query: 272 ICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ D++ + +A A+ + E+++ L+ A I
Sbjct: 239 LTDRKAAVPKPLDEVREAV-RARILEEYRDGKFNEFLETLKGGAKIE 284
>gi|149372557|ref|ZP_01891669.1| putative exported peptidyl-prolyl cis-trans isomerase [unidentified
eubacterium SCB49]
gi|149354600|gb|EDM43164.1| putative exported peptidyl-prolyl cis-trans isomerase [unidentified
eubacterium SCB49]
Length = 490
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 90/289 (31%), Gaps = 24/289 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITF 97
+ + VI + DI LK Q I E + +L+ + L ++ I
Sbjct: 68 EGVTAVVGEYVIVEFDIDLSYQELKAQGIPVEEISRCQLMGKLMEDKLYAHHAKQDSIMV 127
Query: 98 DSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL----AIQSIWPDVVK 149
N + + G S E +++ K+ I + ++ L Q + ++ +
Sbjct: 128 SDNEITQQIDQQMEYMVSELG-SEEKVAAYYRKESISE--LRKELFEVNKTQKLAGEMQR 184
Query: 150 NDFMLKYGNLEMEIP----ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
+ + E+ + + I E + ++ + Q + + + +
Sbjct: 185 S-IIENVEVTPEEVRSFFYNIPEDERPIFSAEVEVAQLVVEPKITQESRQDAIDQ-LNEW 242
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKA--QYLLESDLHPQFQNL-LKKSQNNTTNPYV 262
L SK G S + +F++ + + P+
Sbjct: 243 RTDILENGSSFATKAVLYSKDGSAQKGGLIAGVRRNSPMAKEFKDQAFSLLEGEISEPFQ 302
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T+ G + + R +I + + ++ + + +R+
Sbjct: 303 TEFGFHILKVDKIRGQELDI-RHIIIFPEIKQETMDAAYKK-IDTVRAA 349
>gi|257125090|ref|YP_003163204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptotrichia
buccalis C-1013-b]
gi|257049029|gb|ACV38213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptotrichia
buccalis C-1013-b]
Length = 608
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 25/155 (16%)
Query: 41 RIRTTINGEVITDGDISKR----------------IALLKLQKINGELEKI--------A 76
+ T+NG I D + L ++ +G ++ +
Sbjct: 45 EVIATVNGIKIYRDDFERESYSLKNELNEITQQKIQQLAQVGTNSGNIKSVPDDLVNEYV 104
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q +I + + + GI + VN F + + + L ++F +L G + FKQ
Sbjct: 105 LQLIINKEILLSSAKNLGIKVSGSDVNKEFENYRKQSKLGKKEFGEYLRSVGYNVSSFKQ 164
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
+ Q I ++ E EI ++ K
Sbjct: 165 TIKDQKIIEK-MREKIFSNDKITEEEIKKAYERNK 198
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQ-YLLESDLHPQFQ 247
+ F + + E + + K SK + + G S L P+F
Sbjct: 379 QAGESDFEGAKKQADEIMKTTTKDNFAAKAKEFSKDPESAKNGGSLGETADLSQLVPEFA 438
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
N +K + + P TQ G I I K +A +++ TPT E + + +K
Sbjct: 439 NAVKNGKAGDIVGPIKTQFGYHIIYIQSKDPKNDNVAKVSHIL--ITPTISEASKQKVIK 496
Query: 307 KLRS-NAIIH 315
K+++ A I
Sbjct: 497 KVQNLKAEIE 506
>gi|82775652|ref|YP_401999.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella
dysenteriae Sd197]
gi|81239800|gb|ABB60510.1| putative protease maturation protein [Shigella dysenteriae Sd197]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|223934638|ref|ZP_03626558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514]
gi|223896593|gb|EEF63034.1| PpiC-type peptidyl-prolyl cis-trans isomerase [bacterium Ellin514]
Length = 325
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 75/240 (31%), Gaps = 28/240 (11%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ + G IT D+ + + LQ A+ EL+ + K E +G+ ++
Sbjct: 60 VVGVVQGVNITKDDL---LKDMWLQNAPA-----ALDELLRQRAVKCAAESAGVKITTDD 111
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+ + T S + + L H+++ + ++ M
Sbjct: 112 FQAKANEDIKRTHSS--NLNEMLQHHNTTPAHYQRICEGNMLLEAYIR--------QSIM 161
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LE 220
I A Y+ SIP K Q +K D +++R D K +
Sbjct: 162 TIDAKDYADWVKVRYIYIADAGYNSIPAKKEQTSIETKK-KADQILTKIRNGTDFAKLAD 220
Query: 221 KFASKIHDVS-----IGKAQYLLE--SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
+F +V G + + P F + K Q + P + G +
Sbjct: 221 EFTDSPENVVDGKKQGGYMGWRARSWTQFTPAFEAAVFKLKQGEVSEPIRSDFGYYLAKV 280
>gi|332098560|gb|EGJ03526.1| PPIC-type PPIASE domain protein [Shigella boydii 3594-74]
Length = 611
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 30 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 89
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 90 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 149
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 150 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 209
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 210 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 269
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 270 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 329
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 330 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 362
>gi|16128426|ref|NP_414975.1| periplasmic folding chaperone, has an inactive PPIase domain
[Escherichia coli str. K-12 substr. MG1655]
gi|26246452|ref|NP_752491.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
CFT073]
gi|74311016|ref|YP_309435.1| peptidyl-prolyl cis-trans isomerase [Shigella sonnei Ss046]
gi|82542929|ref|YP_406876.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella boydii
Sb227]
gi|89107311|ref|AP_001091.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K-12
substr. W3110]
gi|91209515|ref|YP_539501.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli UTI89]
gi|110640702|ref|YP_668430.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
536]
gi|117622701|ref|YP_851614.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
APEC O1]
gi|170021186|ref|YP_001726140.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
ATCC 8739]
gi|170080027|ref|YP_001729347.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
str. K-12 substr. DH10B]
gi|188496348|ref|ZP_03003618.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 53638]
gi|191173673|ref|ZP_03035197.1| peptidylprolyl isomerase [Escherichia coli F11]
gi|193067528|ref|ZP_03048495.1| peptidylprolyl isomerase [Escherichia coli E110019]
gi|218557351|ref|YP_002390264.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
S88]
gi|218688305|ref|YP_002396517.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli ED1a]
gi|218703725|ref|YP_002411244.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli UMN026]
gi|227884548|ref|ZP_04002353.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
83972]
gi|237707564|ref|ZP_04538045.1| peptidyl-prolyl cis-trans isomerase [Escherichia sp. 3_2_53FAA]
gi|238899729|ref|YP_002925525.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
BW2952]
gi|256023940|ref|ZP_05437805.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia sp.
4_1_40B]
gi|293403562|ref|ZP_06647653.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli FVEC1412]
gi|293408591|ref|ZP_06652430.1| conserved hypothetical protein [Escherichia coli B354]
gi|298379174|ref|ZP_06989055.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli FVEC1302]
gi|300900512|ref|ZP_07118679.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1]
gi|300918176|ref|ZP_07134783.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1]
gi|300947906|ref|ZP_07162054.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1]
gi|300958009|ref|ZP_07170173.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1]
gi|300988004|ref|ZP_07178484.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1]
gi|301025663|ref|ZP_07189181.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1]
gi|301330692|ref|ZP_07223294.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1]
gi|301647367|ref|ZP_07247179.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1]
gi|306813091|ref|ZP_07447284.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
NC101]
gi|307137086|ref|ZP_07496442.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
H736]
gi|307312181|ref|ZP_07591817.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli W]
gi|309794826|ref|ZP_07689247.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7]
gi|312964534|ref|ZP_07778790.1| PPIC-type PPIASE domain protein [Escherichia coli 2362-75]
gi|331640961|ref|ZP_08342096.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli H736]
gi|331651379|ref|ZP_08352404.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli M718]
gi|331656498|ref|ZP_08357460.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA206]
gi|331661822|ref|ZP_08362745.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA143]
gi|331681836|ref|ZP_08382469.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli H299]
gi|83288412|sp|P0ADY2|PPID_ECOL6 RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase
D; AltName: Full=Rotamase D
gi|83288413|sp|P0ADY1|PPID_ECOLI RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase
D; AltName: Full=Rotamase D
gi|26106850|gb|AAN79035.1|AE016756_218 Peptidyl-prolyl cis-trans isomerase D [Escherichia coli CFT073]
gi|1580712|dbj|BAA11645.1| YbaU [Escherichia coli W3110]
gi|1773125|gb|AAB40197.1| similar to H. influenzae HI1004 [Escherichia coli]
gi|1786645|gb|AAC73544.1| periplasmic folding chaperone, has an inactive PPIase domain
[Escherichia coli str. K-12 substr. MG1655]
gi|73854493|gb|AAZ87200.1| putative protease maturation protein [Shigella sonnei Ss046]
gi|76365131|gb|ABA42059.1| peptidyl-prolyl isomerase [Escherichia coli]
gi|81244340|gb|ABB65048.1| putative protease maturation protein [Shigella boydii Sb227]
gi|85674581|dbj|BAE76221.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli str. K12
substr. W3110]
gi|91071089|gb|ABE05970.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli UTI89]
gi|110342294|gb|ABG68531.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 536]
gi|115511825|gb|ABI99899.1| peptidyl-prolyl isomerase [Escherichia coli APEC O1]
gi|169756114|gb|ACA78813.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli
ATCC 8739]
gi|169887862|gb|ACB01569.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
str. K-12 substr. DH10B]
gi|188491547|gb|EDU66650.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 53638]
gi|190906031|gb|EDV65646.1| peptidylprolyl isomerase [Escherichia coli F11]
gi|192958940|gb|EDV89376.1| peptidylprolyl isomerase [Escherichia coli E110019]
gi|218364120|emb|CAR01785.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
S88]
gi|218425869|emb|CAR06675.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
ED1a]
gi|218430822|emb|CAR11696.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
UMN026]
gi|222032236|emb|CAP74975.1| Peptidyl-prolyl cis-trans isomerase D [Escherichia coli LF82]
gi|226898774|gb|EEH85033.1| peptidyl-prolyl cis-trans isomerase [Escherichia sp. 3_2_53FAA]
gi|227838634|gb|EEJ49100.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
83972]
gi|238861991|gb|ACR63989.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
BW2952]
gi|260450372|gb|ACX40794.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli
DH1]
gi|291429415|gb|EFF02435.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli FVEC1412]
gi|291471769|gb|EFF14252.1| conserved hypothetical protein [Escherichia coli B354]
gi|294490510|gb|ADE89266.1| peptidylprolyl isomerase [Escherichia coli IHE3034]
gi|298280287|gb|EFI21791.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli FVEC1302]
gi|299880017|gb|EFI88228.1| PPIC-type PPIASE domain protein [Escherichia coli MS 196-1]
gi|300315276|gb|EFJ65060.1| PPIC-type PPIASE domain protein [Escherichia coli MS 175-1]
gi|300355993|gb|EFJ71863.1| PPIC-type PPIASE domain protein [Escherichia coli MS 198-1]
gi|300407556|gb|EFJ91094.1| PPIC-type PPIASE domain protein [Escherichia coli MS 45-1]
gi|300414627|gb|EFJ97937.1| PPIC-type PPIASE domain protein [Escherichia coli MS 115-1]
gi|300452506|gb|EFK16126.1| PPIC-type PPIASE domain protein [Escherichia coli MS 116-1]
gi|300843353|gb|EFK71113.1| PPIC-type PPIASE domain protein [Escherichia coli MS 78-1]
gi|301074512|gb|EFK89318.1| PPIC-type PPIASE domain protein [Escherichia coli MS 146-1]
gi|305853854|gb|EFM54293.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
NC101]
gi|306907683|gb|EFN38185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli W]
gi|307552348|gb|ADN45123.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli ABU 83972]
gi|307628089|gb|ADN72393.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
UM146]
gi|308121479|gb|EFO58741.1| PPIC-type PPIASE domain protein [Escherichia coli MS 145-7]
gi|309700702|emb|CBI99998.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli ETEC
H10407]
gi|312290768|gb|EFR18645.1| PPIC-type PPIASE domain protein [Escherichia coli 2362-75]
gi|312945019|gb|ADR25846.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
O83:H1 str. NRG 857C]
gi|315059721|gb|ADT74048.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
W]
gi|315135123|dbj|BAJ42282.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli DH1]
gi|315289841|gb|EFU49231.1| PPIC-type PPIASE domain protein [Escherichia coli MS 110-3]
gi|315294225|gb|EFU53576.1| PPIC-type PPIASE domain protein [Escherichia coli MS 153-1]
gi|315299565|gb|EFU58813.1| PPIC-type PPIASE domain protein [Escherichia coli MS 16-3]
gi|315616618|gb|EFU97235.1| PPIC-type PPIASE domain protein [Escherichia coli 3431]
gi|320186071|gb|EFW60816.1| Peptidyl-prolyl cis-trans isomerase ppiD [Shigella flexneri CDC
796-83]
gi|320197085|gb|EFW71704.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli
WV_060327]
gi|323164242|gb|EFZ50049.1| PPIC-type PPIASE domain protein [Shigella sonnei 53G]
gi|323379714|gb|ADX51982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Escherichia coli
KO11]
gi|323938627|gb|EGB34876.1| ppic-type ppiase domain-containing protein [Escherichia coli E1520]
gi|323943248|gb|EGB39404.1| ppic-type ppiase domain-containing protein [Escherichia coli E482]
gi|323952947|gb|EGB48815.1| ppic-type ppiase domain-containing protein [Escherichia coli H252]
gi|323958634|gb|EGB54337.1| ppic-type ppiase domain-containing protein [Escherichia coli H263]
gi|324010072|gb|EGB79291.1| PPIC-type PPIASE domain protein [Escherichia coli MS 57-2]
gi|324010655|gb|EGB79874.1| PPIC-type PPIASE domain protein [Escherichia coli MS 60-1]
gi|324116929|gb|EGC10842.1| ppic-type ppiase domain-containing protein [Escherichia coli E1167]
gi|331037759|gb|EGI09979.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli H736]
gi|331051120|gb|EGI23172.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli M718]
gi|331054746|gb|EGI26755.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA206]
gi|331060244|gb|EGI32208.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA143]
gi|331081038|gb|EGI52203.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli H299]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|209917658|ref|YP_002291742.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
SE11]
gi|218553008|ref|YP_002385921.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli IAI1]
gi|293418512|ref|ZP_06660947.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B088]
gi|300818227|ref|ZP_07098438.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1]
gi|209910917|dbj|BAG75991.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE11]
gi|218359776|emb|CAQ97317.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
IAI1]
gi|291325040|gb|EFE64455.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B088]
gi|300529118|gb|EFK50180.1| PPIC-type PPIASE domain protein [Escherichia coli MS 107-1]
gi|323184728|gb|EFZ70099.1| PPIC-type PPIASE domain protein [Escherichia coli 1357]
gi|323945347|gb|EGB41403.1| ppic-type ppiase domain-containing protein [Escherichia coli H120]
gi|324016698|gb|EGB85917.1| PPIC-type PPIASE domain protein [Escherichia coli MS 117-3]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|254240198|ref|ZP_04933520.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa 2192]
gi|126193576|gb|EAZ57639.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa 2192]
Length = 621
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 27/221 (12%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + V F+ H ++ E + ++ + ++ K+ F +
Sbjct: 204 SVSDDEVKAFYEGHKSEF-MTPEQ------------------VVVEYV--ELKKSSFFDQ 242
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ ++ A QK + +L + N + +I + + +
Sbjct: 243 VKVKQEDLEALYQKEIANLSEQRDAAHILIEV--NDKVGDEQAKAKIDEIKARLAKGEDF 300
Query: 216 CNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273
++F+ I + G Y P F+ L Q + P T G I +
Sbjct: 301 AALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALKQGEVSAPVKTPYGYHLIKLL 360
Query: 274 DKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ ++ +LK L + +E+ E K L S+A
Sbjct: 361 GVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESSA 401
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + S + +NG+ I+ ++ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + LQ++ + L++ A++ LI TL Q + F ++ +
Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + +A+ F + + F+Q L + + + + + E+
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRMQFRQMLGQEMLIGQL-RAGLAGTGFVTDNELQ 179
Query: 165 ANKQKMKNI 173
+ + K
Sbjct: 180 SFARLEKQT 188
>gi|170759119|ref|YP_001785376.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A3
str. Loch Maree]
gi|169406108|gb|ACA54519.1| peptidil-prolyl isomerase family protein [Clostridium botulinum A3
str. Loch Maree]
Length = 247
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 94/282 (33%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + I +NG+ ITD D+ I ++ + +ELI + +
Sbjct: 1 MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIKQMI------------ 48
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ +A++ EDF L+ K+ L IQ +V+
Sbjct: 49 ---DFELSY-DYAKDMKFDETEDFKKQLEAT-------KKQLLIQIAVSNVLAR---ATV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E + + K + T R +L D++ + ++ + S
Sbjct: 95 SEEESKKYYEENKEEFRTQELITARHILV---DSEKEANNIYEEIKDGLDFS-------- 143
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
EK++ G + P+F+ +L+ + T TQ G I + +
Sbjct: 144 EAAEKYSKCPSKAQGGSLGTFTRGQMVPEFEKAVLEAEVDKVTEAIKTQFGYHLIIVDNI 203
Query: 276 RDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + +KA + + K + E+ + LR +
Sbjct: 204 KESMIKPFDEVKAMIDNKLLQEKQNEQYNEFTQNLRDKYTVE 245
>gi|325577782|ref|ZP_08148057.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae
ATCC 33392]
gi|325160527|gb|EGC72653.1| peptidyl-prolyl cis-trans isomerase [Haemophilus parainfluenzae
ATCC 33392]
Length = 625
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/383 (13%), Positives = 120/383 (31%), Gaps = 93/383 (24%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGE--- 71
+ ++ + ++ +S ++ + +NGE I+ D R + GE
Sbjct: 17 AIFALIPVSFLIGGMSGYLYSSNDSFAAKVNGETISQQDFLNRYNQEFEARAQQEGESFL 76
Query: 72 -----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF--------------- 105
L + +Q L+ + L +Q ++ + +
Sbjct: 77 AKTDSVEFVTALRQNLIQRLVDQELIRQYAKELKLGVSDEMIKRAIVSDPNLQSNGKFDN 136
Query: 106 --FVQHARNTGLSAEDFSSFLD--------KQGIGDNHF--------------------- 134
+ Q GL+++ +++ L + G+ D+ F
Sbjct: 137 VRYQQLLSQNGLTSDTYAAILRNALTLEQMQNGLADSEFVVPAQVKDNAQVFFQKRIARL 196
Query: 135 -----KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----------KMKNITVRE-- 177
+A Q + + +K + +L A Q K++ +T +
Sbjct: 197 ATLPLADEIAKQKVTDEEIKAYYDANAKSLVQPEQAKVQYIHVSANELGKLQPVTETQIA 256
Query: 178 --YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGK 233
Y F KL + ++ D+ L+ D +L K S K+ G+
Sbjct: 257 QYYQENKAQFI--SQKLAHIQLSTEKEADSVYQELKKGADFAELAKTKSLDKLSGAQGGE 314
Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LS 289
++ +++L F++ L + + P I + D+++ E + +
Sbjct: 315 LGWVKDNELPKNFEDAALLLNVGQYSTPVNVDGAYHIILVQDRKERTLEEVKEQIADTVR 374
Query: 290 AQNTPTKIEKHEAEYVKKLRSNA 312
++ + E +R A
Sbjct: 375 KNLAESRFQAVEK----AVREKA 393
>gi|194435312|ref|ZP_03067524.1| peptidylprolyl isomerase [Shigella dysenteriae 1012]
gi|194416444|gb|EDX32601.1| peptidylprolyl isomerase [Shigella dysenteriae 1012]
gi|332085739|gb|EGI90903.1| PPIC-type PPIASE domain protein [Shigella dysenteriae 155-74]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 92/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFAIPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPA--NKQ 168
G+ F LA VV+ N K E EI + +
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGF------VQKRIKDAEESRLRLPKDCNKLEKF 222
K +T ++ + + + Q + + + R R K E
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDGLNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|152974691|ref|YP_001374208.1| peptidylprolyl isomerase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023443|gb|ABS21213.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus cytotoxicus
NVH 391-98]
Length = 285
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 91/305 (29%), Gaps = 49/305 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T + + +S SS T IT GD K++ +
Sbjct: 4 KTLLIATLAIGTFTLSACGAQGSSDAIATSKFSTITKGDFEKQLK-----------SRYG 52
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
L + +K + VN F + G + F + L+ + ++ FK
Sbjct: 53 KDVLYEMMAQDIMTKKY--KVSNEAVNKEFKKAKEQFG---DQFKAVLESNRLKDEDDFK 107
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + K E +I AN + E +L N +
Sbjct: 108 NQIRFKLAMEQAI------KESITEKDIKANYK-------PEIKASHILV----NNEEKA 150
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
++K++ + +L K S+ G Y + P+F+ K
Sbjct: 151 NEIKKKLDE--------GASFEELAKQESEDPGSKEKGGDLGYFGPGKMAPEFEEAAYKL 202
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH---EAEYVKKLR 309
+ P + G I + DK++L +K + +I + + +
Sbjct: 203 KVGEISKPIKSSYGYHIIKLTDKKELKPYNEVKDSIRKNLEKERIADQAIHQKILLNEF- 261
Query: 310 SNAII 314
A I
Sbjct: 262 KKADI 266
>gi|332341805|gb|AEE55139.1| peptidyl-prolyl cis-trans isomerase PpiD [Escherichia coli UMNK88]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|309787033|ref|ZP_07681645.1| PPIC-type PPIASE domain protein [Shigella dysenteriae 1617]
gi|308924611|gb|EFP70106.1| PPIC-type PPIASE domain protein [Shigella dysenteriae 1617]
Length = 611
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 30 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 89
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 90 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 149
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 150 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 209
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 210 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 269
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 270 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 329
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 330 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 362
>gi|331671987|ref|ZP_08372783.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA280]
gi|320173739|gb|EFW48922.1| Peptidyl-prolyl cis-trans isomerase ppiD [Shigella dysenteriae CDC
74-1112]
gi|331070976|gb|EGI42335.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA280]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|256020413|ref|ZP_05434278.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella sp. D9]
gi|332281592|ref|ZP_08394005.1| conserved hypothetical protein [Shigella sp. D9]
gi|320201685|gb|EFW76261.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli EC4100B]
gi|332103944|gb|EGJ07290.1| conserved hypothetical protein [Shigella sp. D9]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|300820313|ref|ZP_07100465.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7]
gi|331666797|ref|ZP_08367671.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA271]
gi|331676113|ref|ZP_08376825.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli H591]
gi|300527098|gb|EFK48167.1| PPIC-type PPIASE domain protein [Escherichia coli MS 119-7]
gi|331066021|gb|EGI37905.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli TA271]
gi|331076171|gb|EGI47453.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli H591]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ ++A K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 374
>gi|303236822|ref|ZP_07323401.1| PPIC-type PPIASE domain protein [Prevotella disiens FB035-09AN]
gi|302482990|gb|EFL46006.1| PPIC-type PPIASE domain protein [Prevotella disiens FB035-09AN]
Length = 477
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 92/297 (30%), Gaps = 28/297 (9%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
+ FT + + LL+T V S + + ++ + E I D+
Sbjct: 12 LVCTAFTMMGVPVGLLSTSSYRPSTDTVKTESETADNVVDQVLWVVGDEPILKSDLE--- 68
Query: 61 ALLKLQKI------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-----H 109
+++LQ G ++++ V+ L + I + Q
Sbjct: 69 -MMRLQGEADGMKWKGNPNCAILEQIAVQKLFLHQAALDSINVTEAEITQGVEQQINAWI 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
A S E + Q +Q L +V+ G++++ ++
Sbjct: 128 AIPQIGSKEKLE---EYQHKSIAQIRQDLHDDFKNRQLVQRMQEKLVGDVKVSPAEVREY 184
Query: 170 MKN------ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
K + + ++ P + ++ +++D + ++ L +
Sbjct: 185 FKKLPVDSIPMIPTTVEVQLITQTPRIEPTEIERIKNQLRDYTDRVVKGETSFETLARLY 244
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
S+ + G+ ++ L P F + ++ G I + D+R
Sbjct: 245 SEDPGSARQGGELGFMGRGMLDPTFAAAAFNLTDPKKVSKVVESEFGYHIIQLIDRR 301
>gi|206578972|ref|YP_002240079.1| peptidylprolyl isomerase [Klebsiella pneumoniae 342]
gi|206568030|gb|ACI09806.1| peptidylprolyl isomerase [Klebsiella pneumoniae 342]
Length = 624
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 90/280 (32%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDISKRIAL--LKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I G +A ++Q+ G+ + + + LI E+L
Sbjct: 42 AAKVNGQEIGRGQFENAVASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + G++ V Q N + FS + + G+ + + Q L Q
Sbjct: 102 DQYARELGLSISDEQVKQAIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLT 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + +P ++ + ++ ++R ++ + ++
Sbjct: 162 TQQLINA-----IAGTDFMLPGESDQLAALVSQQRVVREATINVNTLAAKQTASDEEINA 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++++ R + A + ES + Q+ + ++ T P
Sbjct: 217 FWQQNQARFMAPEQFRVSYIKM-------DAASMQESASDEEIQSWYDQHKDQFTQPQRN 269
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ V I K + + L + T ++ +
Sbjct: 270 RYSV----IQTKTEADAKAVLAELQKGADFATLAKEKSTD 305
>gi|154685453|ref|YP_001420614.1| hypothetical protein RBAM_010190 [Bacillus amyloliquefaciens FZB42]
gi|154351304|gb|ABS73383.1| PrsA [Bacillus amyloliquefaciens FZB42]
Length = 283
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 97/302 (32%), Gaps = 43/302 (14%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +++ + + + + +T G++ +
Sbjct: 1 MKKIAIAAITATSVLALSACSSGDNDVIAKTDAGNVTKGELYTNM--------KKTAGAS 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +L+ E + +K ++ ++ G + +SS + G +++ K
Sbjct: 53 VLTQLVQEKV---LAKKY--KVTDKEIDTKLKEYKTQLG---DQYSSLKQQYG--EDYLK 102
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + K++ + + + K K++ +L + D K ++
Sbjct: 103 DQVKYELLAQKAAKDNIKVTDSDTKEYYDGLKGKIRA--------SHIL--VADKKTADE 152
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254
+ + + + + +SK + G + + + F +
Sbjct: 153 VEKKLKKGE------KFETLAKEYSTDSSKDNG---GDLGWFDKKSMDETFSKAAFGLKV 203
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRSNA 312
++P T+ G I ++R + +K L + K+ + A ++K+ A
Sbjct: 204 GQVSDPVKTKFGYHIIKKTEERGKYDD--MKKELKEEVLKQKLNDNSAVQAAIQKVMKKA 261
Query: 313 II 314
+
Sbjct: 262 DV 263
>gi|325526358|gb|EGD03958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
TJI49]
Length = 287
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 4/162 (2%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E++ ++ + R + + ++P N ++ SR R
Sbjct: 113 SDAEIQTVYDQNRAAFTAPRALHVAQIYIAVPPNADAATVDKARKQAADLASRARNGDFA 172
Query: 217 NKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274
+ + K + G ++ E L P + + P T G + + D
Sbjct: 173 ALAKANSQDKASAANGGDMGFVPEPMLVPAVRQAADALKPGQVSGPIQTPTGFHVVKLID 232
Query: 275 KRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R K + A + ++ Y+ KL NA I
Sbjct: 233 VRAAAPRPLADVKERVRAMLRAQRTQQGAQAYLAKLGGNAPI 274
>gi|295700334|ref|YP_003608227.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
gi|295439547|gb|ADG18716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
Length = 250
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 95/271 (35%), Gaps = 28/271 (10%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
I+ EV+ D+ + I LLKL L +++++ + L +K G+T ++ +
Sbjct: 4 IVRIDDEVV---DVDEFIRLLKLTGQFESL----IEQIVRDKLTVHAAKKQGVTVSADEI 56
Query: 103 NYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
Q R GL A D + +LD + + F+ ++ + K + ++
Sbjct: 57 QQRADQFRRVRGLHRAADMNHYLDALHVSLDEFEVFITDGL---------YQEKMLD-DI 106
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
A + + ++ V + D++ + + + D + + +
Sbjct: 107 GNDAAIRDYFALNSPKFDAIEVSHIVLDSEGKAKEMISYLHDDPDAFA-------DMARE 159
Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDL 278
+ S G +L L P + + + P+ + + E A+ K
Sbjct: 160 HSIADTRESGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPA 219
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + + + + E+V + R
Sbjct: 220 TLDADVATEIRRLLRESWLIARAQEHVIEAR 250
>gi|261418900|ref|YP_003252582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
Y412MC61]
gi|297531148|ref|YP_003672423.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
C56-T3]
gi|319765717|ref|YP_004131218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
Y412MC52]
gi|261375357|gb|ACX78100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
Y412MC61]
gi|297254400|gb|ADI27846.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
C56-T3]
gi|317110583|gb|ADU93075.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
Y412MC52]
Length = 281
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 97/305 (31%), Gaps = 45/305 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + + +S S S I T NG IT + + + K
Sbjct: 1 MKKWMMAAAVVSLMALSACSNDGSEAIVETKNGN-ITKDEFYNEM--------KERVGKS 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+++LI E + ++ + ++ + G + + + G
Sbjct: 52 VLRDLIDEKVLSKKYK-----VTDEEIDREIERIKEAYG---TQYDLAVQQNG------- 96
Query: 136 QYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + + + D+++ ++ E E+ K P + +
Sbjct: 97 EKVIREMVKLDLLRTKAAVEDIKVTEKELKEYYDNYK----------------PKIRASH 140
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LK 251
++ +++L +D KL K S+ + G + + +F+ K
Sbjct: 141 ILVKDEKTAKEVKAKLDKGEDFAKLAKEYSQDPGSASNGGDLGWFGPGKMVKEFEEAAYK 200
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRS 310
++P T G I + DK +K ++ + K++ V KL
Sbjct: 201 LKVGEVSDPVKTDYGYHIIKVTDKEKKKSFNEMKDEIAFEVKRNKLDPATMQSKVDKLVK 260
Query: 311 NAIIH 315
+A +
Sbjct: 261 DAGVE 265
>gi|218693904|ref|YP_002401571.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
55989]
gi|218350636|emb|CAU96328.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
55989]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|157156448|ref|YP_001461628.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
E24377A]
gi|157078478|gb|ABV18186.1| peptidylprolyl isomerase [Escherichia coli E24377A]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|319957104|ref|YP_004168367.1| ppic-type peptidyl-prolyl cis-trans isomerase [Nitratifractor
salsuginis DSM 16511]
gi|319419508|gb|ADV46618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitratifractor
salsuginis DSM 16511]
Length = 287
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 51/282 (18%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL---------E 73
++ + + +S + +NG IT +++ L+ N + +
Sbjct: 5 LLATALSFSMGATLLSASDVIAVVNGHKITKAEVNT---FLRQSMPNQPITYDMLDPKTK 61
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K + LI + + +K+G+ + + A+ L +
Sbjct: 62 KKVLDGLIETEILAEAAQKAGVEKNPEF--QQMLDMAK----------KKLMINAWAKDE 109
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK+ + E + K + K + R +L +
Sbjct: 110 FKKII-----------------VSESEAKEFYQKHQDKFTRPAQVHARHILVKSEKKAQE 152
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKK 252
++ +A + R +K ++ G Y + + P +
Sbjct: 153 IIDQLKGLKGEALQKRF-----IELAKKESTGPTGPKGGDLGYFGKDQMVLPFSKAAFAL 207
Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDLGG---EIALKAYLSA 290
++ T P TQ G I + DK+ + ++A
Sbjct: 208 NKGEITTKPVKTQFGWHVIYVEDKKPAQTIPFDAVKDRVIAA 249
>gi|331645617|ref|ZP_08346721.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli M605]
gi|331045779|gb|EGI17905.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Escherichia coli M605]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREAAIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|167766953|ref|ZP_02439006.1| hypothetical protein CLOSS21_01470 [Clostridium sp. SS2/1]
gi|167710928|gb|EDS21507.1| hypothetical protein CLOSS21_01470 [Clostridium sp. SS2/1]
Length = 247
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 86/279 (30%), Gaps = 46/279 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
I + GE IT D+ IA L ++ + + + + + K G
Sbjct: 4 QNILAVVAGEEITQKDLDALIAALPKEQQAYAGNEHFRNQCLEQIITVHLFAKLGEELKL 63
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
F A H K+ + Q + +K+ + +
Sbjct: 64 EETEAFADNLA----------------------HAKREILAQMALGEAMKDITVSEEEAK 101
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E Q M TV + +L D++ + Q ++K I + +
Sbjct: 102 EYYKANENQFMAGETV---HAKHILV---DDEDKCQEILEKIIGEETTFE-------DAA 148
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
++F++ G + +F++ + P TQ G I + DK+D
Sbjct: 149 KEFSTCPSKEKGGDLGAFGRGQMVKEFEDAAFAAEVGHVVGPVKTQFGYHLIKVEDKKDA 208
Query: 279 G-------GEIALKAYLSAQ---NTPTKIEKHEAEYVKK 307
+ L + KI + + +YV+K
Sbjct: 209 ETSVYEDVADTIKNIILQQKRNDVYGNKIAELKEKYVEK 247
>gi|149926466|ref|ZP_01914727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
gi|149824829|gb|EDM84043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
Length = 260
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 49/297 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-- 72
+L T V ++ A + +NG+ I + +A + +
Sbjct: 1 MLKTTLKATCLAAVLVLGTPVHAQN---AAVVNGQSIPSALVDFIMAEQEKRGQAASPEM 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
QELI + + KQE K G+ + + + + ++
Sbjct: 58 RATIRQELINQEVMKQEAVKKGLGSSPE------------VKYQVQMMNQAILANALRED 105
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K K + E+E A + K + E+ +L
Sbjct: 106 FYK-----------------NTKLTDKEVET-AYAEIAKMMGGSEFRASHILVEQEAEAK 147
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251
+ K K A+ ++ + KD + G + + P+F Q ++
Sbjct: 148 AIIDQLGKGGKFADIAKAK-SKDPGSAP---------NGGDLDWANPNSFVPEFSQAMVG 197
Query: 252 KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYV 305
+ T P +Q G I + D R + L + K E+++ + +
Sbjct: 198 LKKGEYTKTPVKSQFGYHVILLADTRQATPPKLEEIRPQLEQKMINDKWEEYQGKLL 254
>gi|327402946|ref|YP_004343784.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis
DSM 16823]
gi|327318454|gb|AEA42946.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fluviicola taffensis
DSM 16823]
Length = 459
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/312 (8%), Positives = 91/312 (29%), Gaps = 40/312 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIALLKLQKINGELEKIAV- 77
+ +F + + M ++ + ++ ++ ++ +L + + +++ +
Sbjct: 6 LISFLFTLAFTNVFAQPKMIDKVIGQVGDNIVLYSELEGQKQSLKQNSAVPESIDQCVLL 65
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG--IGDNHF- 134
++++ L + E I V+ + + D +G I F
Sbjct: 66 EQMLYNFLLVNQAELDSIQISDEQVDAEMEN---RLRVIENQMKNVKDDKGNPITIESFY 122
Query: 135 ---KQYLAIQS-------IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR--- 181
K + + + V+ ME+ + ++ +
Sbjct: 123 GKTKSQIKEEFRVTIKKRLQGQEVERGITADLDVSPMEVENFFNSIPKDSLPYINSQLSF 182
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEES---------RLRLPKDCNKLEKFASKIHDVSIG 232
+ P ++ QK+I + +S + ++ + G
Sbjct: 183 QQIAIFPKITKSDKEIAQKKIVEIRKSVVSGKMTMCAAAFSNSDDPGSAKNCGRYEATRG 242
Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQ 291
E+ + + T+ G ++ + D++ G + I +S +
Sbjct: 243 MMARTFEA-------TAYSLKVGEISEVFETEFGFHFMQLIDRK--GDDYIVSHILISPK 293
Query: 292 NTPTKIEKHEAE 303
+ ++
Sbjct: 294 FSLDSLDASSKR 305
>gi|288936830|ref|YP_003440889.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola
At-22]
gi|288891539|gb|ADC59857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Klebsiella variicola
At-22]
Length = 624
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 90/280 (32%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDISKRIAL--LKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I G +A ++Q+ G+ + + + LI E+L
Sbjct: 42 AAKVNGQEIGRGQFENAVASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + G++ V Q N + FS + + G+ + + Q L Q
Sbjct: 102 DQYARELGLSISDEQVKQAIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLT 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + +P ++ + ++ ++R ++ + ++
Sbjct: 162 TQQLINA-----IAGTDFMLPGESDQLAALVSQQRVVREATINVNALAAKQTASDEEINA 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++++ R + A + ES + Q+ + ++ T P
Sbjct: 217 FWQQNQARFMAPEQFRVSYIKM-------DAASMQESASDEEIQSWYDQHKDQFTQPQRN 269
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ V I K + + L + T ++ +
Sbjct: 270 RYSV----IQTKTEADAKAVLAELQKGADFATLAKEKSTD 305
>gi|114330677|ref|YP_746899.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
eutropha C91]
gi|114307691|gb|ABI58934.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
eutropha C91]
Length = 630
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 71/189 (37%), Gaps = 22/189 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKING 70
I + + L+ F + SY+ +S + +++GE I+ + + R L+ + G
Sbjct: 11 IVQIVLFIALLPFLFWGLESYQGMGSASDV-ASVDGEEISRQEYEQALRNQQENLRNMLG 69
Query: 71 E-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA---RNTGLS 116
E + ++ LI + L + E + G+ + + A + S
Sbjct: 70 ENFDASLLDSPQMRMAVLENLIQQKLLRHEAGRVGLAVLDSRLTAEIQNIALFHEDDKFS 129
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
E + L +QG+ F+ LA D+++ + + ++ +++
Sbjct: 130 YERYRELLQRQGMSPAMFEARLA-----GDLMRQQLLEGITGSVIVSKTVADRIASLSET 184
Query: 177 EYLIRTVLF 185
+Y I V
Sbjct: 185 KYEINRVTI 193
Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 20/184 (10%), Positives = 63/184 (34%), Gaps = 14/184 (7%)
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ + I+ + + + + + E++ ++ + + V E +L ++P +
Sbjct: 221 TLPERVRIEYVVLSLEELAKQEQISDEEIKKYFDEHQDEFGRVEERRASHILLTVPVDAT 280
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQ 247
+ AE+ ++ +D +K + A ++ + + G + + F+
Sbjct: 281 --EEQKAAIKAKAEQILEQVKQDPDKFPELAKELSEDPGSAKAGGDLGFFARGLMVKAFE 338
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG---EIAL---KAYLSAQNTPTKIEKH 300
+ + + P T G I + +D + + L Q + +
Sbjct: 339 DTAFEMQLDEIRGPVETPFGFHIIRLTAVKDANVAKFDEVKEGIRQTLQRQKAADRFGEL 398
Query: 301 EAEY 304
++
Sbjct: 399 SEDF 402
>gi|297569902|ref|YP_003691246.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio
alkaliphilus AHT2]
gi|296925817|gb|ADH86627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio
alkaliphilus AHT2]
Length = 630
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/368 (12%), Positives = 101/368 (27%), Gaps = 91/368 (24%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70
L+ V+II + V T+N + I+ + +R L Q +
Sbjct: 13 LIQAAVVIIILVFILWVPQMGGNGDPGTVATVNDQPISTREFQRRYNDLLGQYRDQFEGA 72
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAE 118
L + + +++ ETL Q K+G+ S + + N S +
Sbjct: 73 IPSELIEALGLREQVLSQMVQETLLLQSARKTGLPVSSEELQQAVQSMGEFTENGQFSLQ 132
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDV--------------VKNDFML---KYGNLEM 161
+ L + + F+ L + + V+ F + +
Sbjct: 133 LYRQILAASRLSVHEFEAGLRTDLLRRKILEHLMGFAQVSDQEVRERFHRDHDQVRLSYL 192
Query: 162 EIPANK-QKMKNITVRE------------------------------------------Y 178
+ A+ + ++ T E Y
Sbjct: 193 YLRADDFRAAQDPTSEEIEAYFAEKDHRYRTPPQVRIDYLLFPADDTEMTIEEEDLVAYY 252
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-------- 230
F P+ + ++ R EE+R R + +++ A + D
Sbjct: 253 EQNRDRFDTPEQRRARHILIRSRSDAPEETRARQRQQAETVQELAREGQDFRQLALLYSE 312
Query: 231 ------IGKAQYLLESD-LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
G + + L P + + ++ T G I + + ++
Sbjct: 313 DRSAEDGGDLGFFRRGEMLEPLEEAVFAMEPGEISDIVETSLGFHVIKLEEIQEPQTITL 372
Query: 284 LKAYLSAQ 291
+A +
Sbjct: 373 AEAEAEIR 380
>gi|167624682|ref|YP_001674976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
halifaxensis HAW-EB4]
gi|167354704|gb|ABZ77317.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
halifaxensis HAW-EB4]
Length = 621
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 20/167 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREGSQGVIAKSILVLVILSFAFTGVSSY-LGSSTEVAAATVNGEEISNSALEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R L + +++ ++ L+ ETL Q + G+ +
Sbjct: 60 QNERSRLEQQLGDMFATLSADDNYMQSVKQSVLERLVAETLLDQNAAELGLRVSDEQIKA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ + + + + L + G N F+ + +V
Sbjct: 120 AIMTEPAFQTDGRFDNDRYQAILRQLGYQANSFRDMMRTDMTRRQLV 166
>gi|307726909|ref|YP_003910122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
gi|307587434|gb|ADN60831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
Length = 250
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 94/271 (34%), Gaps = 28/271 (10%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
I+ EV+ D+++ I LLKL L +++++ + L +K GI ++ +
Sbjct: 4 IVRIDDEVV---DVAEFIRLLKLTGQFESL----IEQIVRDKLTVHAAKKQGIVVTADEI 56
Query: 103 NYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
Q R GL A D + +LD + + F+ ++ + K +
Sbjct: 57 QERADQFRRVRGLHRATDMNQYLDVLNVSLDEFEAFITDGL---------YQEKMLDQVG 107
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
A + + ++ V + D++ + + + D E + +
Sbjct: 108 N-EAAVRDYFALNSPKFDAIEVSHIVLDSEGKAKEMISYLRDDPESFA-------DMARE 159
Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDL 278
+ + G +L L P + + + P+ + + E A+ K
Sbjct: 160 HSIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPA 219
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + A + + + E+V + R
Sbjct: 220 TLDADVAAEVRRLLRESWLIARAQEHVIEAR 250
>gi|170681699|ref|YP_001742585.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
SMS-3-5]
gi|218698647|ref|YP_002406276.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli IAI39]
gi|300937058|ref|ZP_07151924.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1]
gi|301022565|ref|ZP_07186437.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1]
gi|170519417|gb|ACB17595.1| peptidylprolyl isomerase [Escherichia coli SMS-3-5]
gi|218368633|emb|CAR16372.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
IAI39]
gi|284920251|emb|CBG33310.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli 042]
gi|300397446|gb|EFJ80984.1| PPIC-type PPIASE domain protein [Escherichia coli MS 69-1]
gi|300457889|gb|EFK21382.1| PPIC-type PPIASE domain protein [Escherichia coli MS 21-1]
gi|323170528|gb|EFZ56178.1| PPIC-type PPIASE domain protein [Escherichia coli LT-68]
gi|323965128|gb|EGB60587.1| ppic-type ppiase domain-containing protein [Escherichia coli M863]
gi|327254769|gb|EGE66385.1| PPIC-type PPIASE domain protein [Escherichia coli STEC_7v]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ ++A K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 374
>gi|15606786|ref|NP_214166.1| hypothetical protein aq_1695 [Aquifex aeolicus VF5]
gi|2984018|gb|AAC07562.1| putative protein [Aquifex aeolicus VF5]
Length = 296
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 87/283 (30%), Gaps = 44/283 (15%)
Query: 40 SRIRTTINGEVITDGDIS-------KRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92
S+I ++G +T ++ KRI L K E ++I + + + + L +E +K
Sbjct: 17 SQIVAEVDGYKVTKEELDTLFHVFWKRITHLSSAKPTQEDKRIFLIDYVADLLILKEAKK 76
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
GI +N F ++ +K I VK +
Sbjct: 77 MGIEVSEKEINDFIRKYVGR---------KIKEKSVINA----------------VKAEI 111
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+++ ++ ++I Y F P + G K K+AE L
Sbjct: 112 LVEKLVDKLMKEQELNPSEDILRAYYEFYKREFYRPSSVKLL-GIYVKSKKEAERISQIL 170
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIA 271
+ DV + K + L + + S + P G
Sbjct: 171 KQG------EVPSTEDVKVSKPLWYSIPTLPKYIRRNFRTLSVGEVSKPIKINDGYLVFK 224
Query: 272 ICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
I DK+ + E A + E +++ ++
Sbjct: 225 ILDKKPAGFIPFERAKSLVKKMYLKEKRKEVF-KKWLSEVLKK 266
>gi|329113840|ref|ZP_08242611.1| Cell-binding factor 2 [Acetobacter pomorum DM001]
gi|326696850|gb|EGE48520.1| Cell-binding factor 2 [Acetobacter pomorum DM001]
Length = 260
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 82/278 (29%), Gaps = 50/278 (17%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGITFDS 99
T+NGE IT D+ + L Q + V +L + +K G+
Sbjct: 2 VATVNGEKITLSDVQTAMISLPPQMRQLPPNLIFPMLVNQLADQKAILITAQKEGLDKKP 61
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V A NT L S + + D+ KQY
Sbjct: 62 -ETQQMMVN-ASNTALQNAWLSEQVMPH-LNDDAIKQYY--------------------- 97
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
++ +E R +L + + ++K A+ +L +K
Sbjct: 98 ------DQNYAGKPAEKEVHARHILVKT---EAEANDVIKKLKAGADFGKLAAEVSTDKG 148
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKRD 277
+ G + ++D+ P F + + + P +Q G I + D R
Sbjct: 149 SAQQ------NGGDLGWFKKTDMIPAFSDAAFAMKKGEISSTPVKSQYGYHVIQVLDTR- 201
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + + +YV++ A
Sbjct: 202 -TDPVPTLDSVRDKIR----QALIQKYVREAVDKATNQ 234
>gi|281177612|dbj|BAI53942.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli SE15]
Length = 623
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREAAIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|317499572|ref|ZP_07957835.1| ppic-type ppiase domain-containing protein [Lachnospiraceae
bacterium 5_1_63FAA]
gi|291559696|emb|CBL38496.1| Parvulin-like peptidyl-prolyl isomerase [butyrate-producing
bacterium SSC/2]
gi|316893121|gb|EFV15340.1| ppic-type ppiase domain-containing protein [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 247
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 86/279 (30%), Gaps = 46/279 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
I + GE IT D+ IA L ++ + + + + + K G
Sbjct: 4 QNILAVVAGEEITQKDLDALIAALPKEQQAYAGNEHFRNQCLEQIITVHLFAKLGEELKL 63
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
F A H K+ + Q + +K+ + +
Sbjct: 64 EETEAFADNLA----------------------HAKREILAQMALGEAMKDITVSEDEAK 101
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E Q M TV + +L D++ + Q ++K I + +
Sbjct: 102 EYYKANENQFMAGETV---HAKHILV---DDEDKCQEILEKIIGEETTFE-------DAA 148
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
++F++ G + +F++ + P TQ G I + DK+D
Sbjct: 149 KEFSTCPSKEKGGDLGAFGRGQMVKEFEDAAFAAEVGHVVGPVKTQFGYHLIKVEDKKDA 208
Query: 279 G-------GEIALKAYLSAQ---NTPTKIEKHEAEYVKK 307
+ L + KI + + +YV+K
Sbjct: 209 ETSVYEDVADTIKNIILQQKRNDVYGNKIAELKEKYVEK 247
>gi|293413696|ref|ZP_06656345.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B185]
gi|291433754|gb|EFF06727.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli B185]
Length = 623
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRARYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKQKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|152968976|ref|YP_001334085.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238893390|ref|YP_002918124.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Klebsiella
pneumoniae NTUH-K2044]
gi|150953825|gb|ABR75855.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545706|dbj|BAH62057.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 624
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 90/280 (32%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDISKRIAL--LKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I G +A ++Q+ G+ + + + LI E+L
Sbjct: 42 AAKVNGQEIGRGQFENAVASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + G++ V Q N + FS + + G+ + + Q L Q
Sbjct: 102 DQYARELGLSISDEQVKQAIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLT 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + +P ++ + ++ ++R ++ + ++
Sbjct: 162 TQQLINA-----IAGTDFMLPGESDQLAALVSQQRVVREATINVNALAAKQTASDEEINA 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++++ R + A + ES + Q+ + ++ T P
Sbjct: 217 FWQQNQARFMAPEQFRVSYIKM-------DAASMQESASDEEIQSWYDQHKDQFTQPQRN 269
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ V I K + + L + T ++ +
Sbjct: 270 RYSV----IQTKTEADAKAVLAELQKGADFATLAKEKSTD 305
>gi|78356452|ref|YP_387901.1| peptidyl-prolyl cis-trans isomerse domain-containing protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218857|gb|ABB38206.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 629
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/360 (13%), Positives = 95/360 (26%), Gaps = 93/360 (25%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG----DISKRIALLKLQ----- 66
+ F LII V S + + IT + +++ L++ Q
Sbjct: 14 VKIAFGLIIIVFVFWGVGSMDNQPSNVVAKVGKTSITVNAFAREYEQQVELVRAQFPDVT 73
Query: 67 ---KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNTGLSAED 119
L+ + ++I E L Q+ EK G+ + + + E
Sbjct: 74 SEDLKQAGLKMRVLNQMISEVLLVQQAEKQGLEVSPAELKLRIAEIPVFNDADGNFDGER 133
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSI---------WPDVVKND------------------- 151
+ L QG ++ + + P V +
Sbjct: 134 YKQVLAAQGTTPGAYEDKIRRSMLAQKMRDFITMPAAVTAEEAKAMFLYSAERRSMDYVL 193
Query: 152 -----FMLKYGNLEMEIPA-NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR---- 201
++ + E +I A KQ ++N V + + P R
Sbjct: 194 FAAENYLDQVKPGEEQISAFYKQNIENYKVPPRVTLQYVMITPAALADGASVSDDRIAAY 253
Query: 202 ---------------------IKDAEESRLRLPKDCNKLEKF----------ASKIHDVS 230
+ DA S ++ K+ + A + S
Sbjct: 254 YEDNKESFRQEERVHARHILVLADAGASEEKVAAAEKKINELYERIRKGADFAKVAKEAS 313
Query: 231 IGK-------AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G + + P+F Q + T P TQ G I + +K +
Sbjct: 314 EGPSAPLGGDLGWFGRGQMVPEFEQAAFAAAAGQVTAPVRTQFGFHIIKVEEKENARIRT 373
>gi|313888943|ref|ZP_07822603.1| putative peptidylprolyl isomerase PrsA1 [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845116|gb|EFR32517.1| putative peptidylprolyl isomerase PrsA1 [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 249
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 49/280 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQELIVETLKKQEIEKSGI 95
++ +NG+ IT D + I L Q EL K V EL+ + L ++ + G+
Sbjct: 4 DKVLAEVNGKKITGVDYNLFIDSLNPQLKQYFGGEELNKDVVNELVYQALLYEDAMEKGM 63
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + V+ + + L L + D K++
Sbjct: 64 DKEDEFIQ--VVEKTKESMLKTYALGKLLATAEVKDEDIKKF------------------ 103
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E A KQ +L + + + + +K + L
Sbjct: 104 ---YEENKDAFKQGESA------DASHILV---EEEDKAREIYEKIKNGGDFEEL----- 146
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+++++ G + + +F++ + + T P TQ G I I
Sbjct: 147 ---AKEYSTCPSKEKGGNLGTFTKGQMVKEFEDAVFENEVGTITEPVKTQFGYHIIKINQ 203
Query: 275 K---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
K R+L + + Q K ++ + + +L+
Sbjct: 204 KNDARELSFDEVKDRIV-EQVRRQKEQEIYNKKITELKDK 242
>gi|323976074|gb|EGB71167.1| ppic-type ppiase domain-containing protein [Escherichia coli
TW10509]
Length = 623
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ ++A K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 374
>gi|268316323|ref|YP_003290042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
gi|262333857|gb|ACY47654.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
Length = 696
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/340 (11%), Positives = 92/340 (27%), Gaps = 69/340 (20%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGD----ISKRIALLKLQKINGE-------LEKIAVQEL 80
++ + +NG+ I+ + + ++ + Q + + L
Sbjct: 33 AFDVVGRTGDTIAEVNGDPISYQEYVRAVEAQMQAYQQQTGEAPTPQMSDLIREQVFNAL 92
Query: 81 IVETLKKQEIEKSGITFDSNT------------------------VNYFFVQ-------- 108
+ E L++Q +E+ GIT + VN +Q
Sbjct: 93 VEERLRQQAMERLGITVTDDEVVQMVLGDNPHPIIKAYFGDENGNVNRALLQNFIDNPAA 152
Query: 109 -----------HARNTGLSAEDFSSF---LDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
A E + Q + + + ++ L V +
Sbjct: 153 REDWIRLEEYLRAERARQKLEQLLLATVHVSDQEVEEEYRRRTLRAD---ARYVALRYAE 209
Query: 155 ----KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
E ++ + ++ R+ R V ++P N + +++ +
Sbjct: 210 VPDDSVTVTESDLRRYYNEHRDDFKRKRTYRVVYVALPKNPTAEDTL--QVLEELNRLKE 267
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVE 268
R + N A + A + + +L P +++ P V
Sbjct: 268 RFAQTENDSLFLARYASERPFTDAFFRRD-ELDPALGDVVFDDPQPGKVVGPVVAGGLAH 326
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ I R + ++ + E + L
Sbjct: 327 LVKIRAVRPSEETVIRARHILIRAPEGDAEARRQARQEAL 366
>gi|118477742|ref|YP_894893.1| peptidylprolyl isomerase [Bacillus thuringiensis str. Al Hakam]
gi|118416967|gb|ABK85386.1| protein export protein [Bacillus thuringiensis str. Al Hakam]
Length = 298
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 101/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G IT+ ++ L+ +
Sbjct: 12 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGES 67
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 68 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLK 114
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + + E ++ K+ E + +L
Sbjct: 115 NEDELKEKMKPEIAFEKAITA------TVTEKDV-------KDNYKPEMKVSHILVK--- 158
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 159 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 209
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + +K++L +K + +++ ++
Sbjct: 210 EAAYKLDAGQVSEPVKTTYGYHIIKVTNKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 269
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 270 QVVNELLKDADI 281
>gi|293606739|ref|ZP_06689092.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
gi|292814889|gb|EFF74017.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
Length = 352
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/156 (10%), Positives = 49/156 (31%), Gaps = 5/156 (3%)
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ +++ + K + +Y + + P +K+ + + D
Sbjct: 163 DADLQAAYERAKPQLAVPAQYHVSQIFLPAPLGDADAVAATRKQALELTKRAQAPKADFA 222
Query: 218 KLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274
L + S+ G ++ + L P+ + ++++ + P + G + +
Sbjct: 223 ALAQAHSRDETSRAQGGDIGFVPLAQLTPEMRPVIEQMKAGEVSAPVQSAAGFHILKLTA 282
Query: 275 KRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKL 308
R + + + E Y++ L
Sbjct: 283 LRPASVTPFEQVSPQLRTALRSQRQELAARAYMEGL 318
>gi|317492905|ref|ZP_07951329.1| ppic-type ppiase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316919027|gb|EFV40362.1| ppic-type ppiase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 627
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 20/164 (12%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE------- 71
++I+ ++ V S ++G+ I+ G + + + +LQ+ G+
Sbjct: 20 LIIVSFVLTGVGGYLTGGSGDYAAKVDGQEISRGQLEQAVQSERSRLQQQLGDQFSVLAG 79
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFS 121
L K A+ LI + L Q +K G+ V N +
Sbjct: 80 NEGYMKELRKQALNRLIDDMLLDQYAKKLGLGISDEQVKEAIWAMPYFQTNNQFDNAKYL 139
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
S + G+ +++ Q + Q +++ + L +E+ A
Sbjct: 140 SIIANMGLTPDNYAQLVRQQLTSQQLIQA-YTATGFTLPVEVEA 182
>gi|150020160|ref|YP_001305514.1| hypothetical protein Tmel_0255 [Thermosipho melanesiensis BI429]
gi|149792681|gb|ABR30129.1| hypothetical protein Tmel_0255 [Thermosipho melanesiensis BI429]
Length = 328
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/319 (13%), Positives = 94/319 (29%), Gaps = 52/319 (16%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVIT----------------DGDISKRIALLKLQKINGE 71
+ + S+ ++ +N EVIT I + L
Sbjct: 12 ISVFSFSEQLPATSTVAIVNEEVITLETLNSVADVQKLMVSISQIDQ-TFFNILSNTEEG 70
Query: 72 LE------KIAVQELIVETLKKQEIEKSGITFDSNT----VNYFFVQHARNTGLSAEDFS 121
++ + +++L+ + L Q EK V+ + R+ G+ E F+
Sbjct: 71 IKVILRYKRAILEQLVDKYLIVQFAEKYNARPSDEEVKQLVDEQLSNYLRDQGIDEETFN 130
Query: 122 SFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFM-----LKYGNLEMEIPANKQKMKNITV 175
+L+ + FK+ + + ++ ++N + E K K T
Sbjct: 131 FYLEYANMGSLEDFKKRMYLNTLVNLSIENLYKAVTKDATITVSEARDYYEKNIDKYATP 190
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+Y + + + + V+ RI E ++ K+ + F + +
Sbjct: 191 TQYDL----YLLKLSSDSVARDVKNRISGGESFE-KVAKELGIDKYFYEGLSEG------ 239
Query: 236 YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQ 291
+L + +K + P + G I R E +
Sbjct: 240 ----EELSQKLWMYIKNAPEGAILGPIDDKNGFYLFKILKIIPMRSKPFEEVKHDIIEEM 295
Query: 292 NTPTKIEKHEAEYVKKLRS 310
+ K K+ +
Sbjct: 296 LSSKKSTIWSEFIDKEFKK 314
>gi|46201262|ref|ZP_00208032.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magnetotacticum MS-1]
Length = 273
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 80/287 (27%), Gaps = 52/287 (18%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
+ + +NG I +++ Q + ++ I L ++ ++
Sbjct: 23 PAFAADTVVANVNGSDIKMSQLAE----FGRQMGPQAPYEAVLEVAINNQLVYEQAKRDK 78
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ D V + + L Q++ V+
Sbjct: 79 LDADP-EVKAALHR-------------------------VEIQLMAQALMQKKVRGAITE 112
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + + + E R +L ++ + + E ++ R
Sbjct: 113 EAVKARYDQAVKNFQPQE----EVHARHILVETEESARSIIADLNRGQDFGELAKSRSKD 168
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAI 272
G Y ++ + P+F + + P TQ G I +
Sbjct: 169 ----------TGSGAMGGDLGYFVQGAMVPEFSTVAFAMRPGEVSKTPVKTQFGYHVIKV 218
Query: 273 CDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
DKR + K ++ Q ++ + + V LR A I +
Sbjct: 219 EDKRMATIPPYDQAKPVIARQIA----DELQEKMVVDLRDKAKIKRF 261
>gi|297181233|gb|ADI17427.1| parvulin-like peptidyl-prolyl isomerase [uncultured
Rhodospirillales bacterium HF0070_31K06]
Length = 293
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 87/315 (27%), Gaps = 53/315 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSR-----IRTTINGEVITDGDISKRIALLKLQK 67
++ L V I+ + ++ R + T+NGE I G + + L +
Sbjct: 3 LRALPAVIVASAAFILSTGHLAAQSVRDRLAKDVVVATVNGEQILSGHLLQAFQNLPRKH 62
Query: 68 INGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L +++LI L H R LS + L
Sbjct: 63 RQRGLRAVYGELLEQLIENRL--------------------LTYHGRENNLSGDAEVKAL 102
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ + + ++ + ++++ + + E R +L
Sbjct: 103 ------VKEAEDQIVARVYLNRLISQ----SITDSKLKVRYEELVKNTPSHEEVRARHIL 152
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH- 243
S ++ ++ + + + G Y SD+
Sbjct: 153 VS-----------TEQEAQEVLKLLAGGQPFEEVAKTHSKDPAASRGGDLGYFRSSDMVK 201
Query: 244 PQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
P T+ P T+ G I + D+R + L Q +
Sbjct: 202 PFSAAAFAMKPGETSASPVKTEFGWHVIKVEDRRQSS--VPPFDRLRPQIARDLGRRIAI 259
Query: 303 EYVKKLRSNAIIHYY 317
E + R+ + I +
Sbjct: 260 EILNAARNGSEIQRF 274
>gi|170690702|ref|ZP_02881868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
graminis C4D1M]
gi|170143951|gb|EDT12113.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
graminis C4D1M]
Length = 250
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 83/254 (32%), Gaps = 26/254 (10%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K+ G+ E + +++++ + L +K GI ++ + Q R GL A D
Sbjct: 17 FIRLLKLTGQFESL-IEQIVRDKLTVHAAKKQGIVVTADDIQERADQFRRVRGLHRATDM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--KMKNITVREY 178
+ +LD + + F+ ++ + K + A K + +
Sbjct: 76 NQYLDVLNVSLDEFEAFITDGL---------YQEKMLDQVGNDAAVKDYFALNSPKFDAI 126
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ ++ K + R + + + + G +L
Sbjct: 127 EVSHIVL----------DSEGKAKEMISYLRDDPDSFADMAREHSIADTREAGGVIGKVL 176
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
L P + + + P+ + + E A+ K + + A + +
Sbjct: 177 RGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTAKYPATLDADVAAEVRRLLRES 236
Query: 296 KIEKHEAEYVKKLR 309
+ E+V + R
Sbjct: 237 WLIARAQEHVIEAR 250
>gi|114777815|ref|ZP_01452746.1| peptidyl-prolyl cis-trans isomerase D [Mariprofundus ferrooxydans
PV-1]
gi|114551806|gb|EAU54346.1| peptidyl-prolyl cis-trans isomerase D [Mariprofundus ferrooxydans
PV-1]
Length = 636
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 54/153 (35%), Gaps = 2/153 (1%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ E+ K+K + E + +L + +N + ++ +A ++R++
Sbjct: 245 VQVDESEVRKAFEKRKAEFSRPEERKAQHILIKVAENAPEAVRAAARKKIEAAQARIKAG 304
Query: 214 KDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
+D + + K S+ S G+ + + + F Q + + ++ T G I
Sbjct: 305 EDFSAVAKAVSEDGTASSGGELGWFKQGSMVTAFDQAVFAMDKGQVSDIVETPFGYHLIR 364
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ D R + K E Y
Sbjct: 365 LEDIRPAHEASYDDVKDGIRQDLVKARAAEEAY 397
>gi|157962498|ref|YP_001502532.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana
ATCC 700345]
gi|157847498|gb|ABV87997.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella pealeana
ATCC 700345]
Length = 621
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + T+NGE I++ + +
Sbjct: 1 MLEKIREGSQGVIAKSILILVILSFAFTGVSSY-LGSSTEVAAATVNGEEISNSALEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R L + +++ ++ L+ E L Q + G+ +
Sbjct: 60 QNERSRLEQQLGDMFATLSADDNYMQSVKQSVLERLVAEKLLDQNAAELGLRVSDEQIKA 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLE 160
+ + + + + L + G N F+ + I +V + E
Sbjct: 120 AIMSEPAFQTDGAFDNDRYQAILRQLGYQANSFRDMMRIDMTRRQLVATLVGSEFVLPSE 179
Query: 161 MEIPANKQKM 170
+ A+ Q
Sbjct: 180 AKYVADLQGQ 189
>gi|46446030|ref|YP_007395.1| hypothetical protein pc0396 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399671|emb|CAF23120.1| hypothetical protein pc0396 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 375
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/340 (15%), Positives = 113/340 (33%), Gaps = 43/340 (12%)
Query: 7 TSLSDFIKLLTTYFVLII-----FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
T + T++ L F +++RI ING+ I+ D+ K++
Sbjct: 22 TIFIASLSFFLTFYALEAIKSDDFLSSSRTEESKIFINNRILARINGKPISAYDLVKKMD 81
Query: 62 LLKLQKINGELE-------------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ ++ L K A+++LI + L + ++S + S V
Sbjct: 82 VTFYKQFPQYLSSTEARYQYYQFSWKYALEDLINKELILADAQESKVEVTSGDVRQEMEL 141
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
+ LDK G+ + + + ++ + + P+ +
Sbjct: 142 MFGPN------IIASLDKIGLSFEEASKIVQGDILLKRMIGAR--VNGKAIRQVTPSRVR 193
Query: 169 KM-----KNITVREYLI-RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE-- 220
K K+ I + +I D L+ + + + + KL+
Sbjct: 194 KSYEDFIKDPANIRLTIWNYKVLTIKDRNLKKSEEIAQAAYQLLRKGFSIEEVPAKLKEG 253
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVE------YIAIC 273
K + V++ K + E +L +Q +L + P+ + VE + +
Sbjct: 254 KLLGRKGKVTVSKVIHNNEKELSKSYQQILNPLDTGMYSLPFENKSRVEHTTVYRILFVQ 313
Query: 274 DKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSN 311
+K G + L + ++ Y+KKLR +
Sbjct: 314 EKIPGGYPSFKEMEPVLKERLLNQVADEETDLYLKKLREH 353
>gi|320107420|ref|YP_004183010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus
saanensis SP1PR4]
gi|319925941|gb|ADV83016.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus
saanensis SP1PR4]
Length = 661
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 85/270 (31%), Gaps = 28/270 (10%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG-----LSAEDFSS 122
+ EK +++ E + ++ +G+ + N V ++ +S ED
Sbjct: 159 TTADFEKEIKEDM--ERRRLRQFVTAGVNVNDNAVRSAYLLSGTKVKFDYAMISPEDVKK 216
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY---- 178
+ + + V + + +P K ++ + V+ Y
Sbjct: 217 NVTSTDSELQKYFNDNKARYA-KAVAEARKVTYVAVAADSLPGGKPQVSDAEVQSYYSQH 275
Query: 179 ----------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+R +L S+P K +++R + L K S
Sbjct: 276 ADQYKVEEQVRVRHILISVPPGADAKVDAAAKTKAQDLLTKIRAGGNFADLAKANSDDPG 335
Query: 229 --VSIGKAQYLLE-SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--I 282
+ G+ ++ + P FQ + T++ TQ G I +++D +
Sbjct: 336 SKGTGGELGWVKSNGQMVPAFQTAAMALKAGQTSDLVKTQFGYHIIQATERQDAHVKPLT 395
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + + K E +V L + A
Sbjct: 396 EVASQIRPMLEQQKAAAAEQSFVTALSNEA 425
>gi|323343304|ref|ZP_08083531.1| hypothetical protein HMPREF0663_10066 [Prevotella oralis ATCC
33269]
gi|323095123|gb|EFZ37697.1| hypothetical protein HMPREF0663_10066 [Prevotella oralis ATCC
33269]
Length = 475
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 89/297 (29%), Gaps = 54/297 (18%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV- 82
+F + + + A TI G+ +T + G ++K +V E +
Sbjct: 6 LFAAMLLFAGVVHAQVDPTIMTIGGQPVTRSEFEYSYN---KNNAEGVIDKKSVDEYVDL 62
Query: 83 ---ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY-L 138
LK E + + + F ++ +
Sbjct: 63 FVNYKLKVMAAEAAHLD-------------------TLSSFKQEFA-------TYRDQQI 96
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
I V+ + Y + + + +K +L IP Q +
Sbjct: 97 RPAMITNADVEAEAWRIYSQAQHRVDSMGGLVKPA--------HILIGIPQKASQAEQDA 148
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255
K+ D+ + L+ D +L K S + G+ ++ + +F + + +
Sbjct: 149 AKQRVDSIYNILKKDGDFAELAKKYSSDVASARNGGELPWIEKGQTLKEFDEKIFSMKKG 208
Query: 256 NTTNPYVTQKGVEYIAICDKRD------LGGEIAL---KAYLSAQNTPTKIEKHEAE 303
+ P++T G + + DK L +I + L + +++
Sbjct: 209 ELSKPFLTPAGYHIVILKDKGKFFPYDSLRADILKFIDQRGLRDEIINHRLDSLAKA 265
>gi|302876602|ref|YP_003845235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
gi|307687276|ref|ZP_07629722.1| peptidylprolyl isomerase [Clostridium cellulovorans 743B]
gi|302579459|gb|ADL53471.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
Length = 339
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 85/278 (30%), Gaps = 30/278 (10%)
Query: 9 LSDFIKLLTTYFVLIIF---CIVPIVSYKSWAMSSRIRTTINGEVITDGDI--------- 56
+ + KL+T + + I A + ++ + + IT G++
Sbjct: 1 MKNIKKLVTAVMLGTMIISVSACGIAEKTPAAKAKQVVAKVGEKKITRGEVDTAMQSYID 60
Query: 57 SKRIALLKLQKINGEL-------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
+ + + + E + ++ ++ L Q IE + + + + +N +
Sbjct: 61 EAKAKYGEKYETSKEAMKSINAQREAQLKNMVDTELMLQYIEDNNLEINMDEINSETDKE 120
Query: 110 ARNTGLSAED-----FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ L G FK+Y + + D K + E+
Sbjct: 121 IEKMKTDYGQGDEQKYIDVLKNAGFTPESFKEYTKNRKL-TDKAKEAIGKDITVSDEELA 179
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ + + I+ V + + N K I DA + ++ K S
Sbjct: 180 TSFN-EETFKTEKANIKHVQYILIKNDANEDKAKNKEIADAALAEIKGGLSFADAAKKYS 238
Query: 225 KIHDV--SIGKAQYLL-ESDLHPQF-QNLLKKSQNNTT 258
+ + G + +S L F + L + +
Sbjct: 239 EDSSTSQTGGYLGEVTDQSQLVEGFLKAALALNPGQVS 276
>gi|261855012|ref|YP_003262295.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus
neapolitanus c2]
gi|261835481|gb|ACX95248.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halothiobacillus
neapolitanus c2]
Length = 645
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 10/156 (6%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+K + ++E K +R +L S+P N + ++ A +R +
Sbjct: 245 VKVTDAQVEQAYANYVKKQEAQVVRTVRHILISVPKNA--DGAAIEAAKNKALAARAAIV 302
Query: 214 KDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
A + D G + + F+ + + + P TQ G
Sbjct: 303 SGKTSFADEARAVSDDPGSKNKGGDLGEVAPGQMVKPFEEAMDALKVGEVSEPVRTQFGW 362
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + ++ +I A + + E+ +
Sbjct: 363 HLIEVT--KESHPDIKPLADMRDKMVAEVQEQQVEK 396
>gi|218549891|ref|YP_002383682.1| peptidyl-prolyl cis-trans isomerase [Escherichia fergusonii ATCC
35469]
gi|218357432|emb|CAQ90071.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia
fergusonii ATCC 35469]
Length = 638
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/325 (12%), Positives = 96/325 (29%), Gaps = 82/325 (25%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I+ G ++Q+ G+ L + + LI E L
Sbjct: 57 AAKVNGQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 116
Query: 87 KQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + V F A + +++ L++ G+ + + Q L Q
Sbjct: 117 DQYSRDLKLGISDEQVKQAIFATPAFQVDGKFDNSRYNAILNQMGMSADQYAQALRNQLT 176
Query: 144 WPDVVKN---------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
++ +++ +++ A KQ++ + + Y +
Sbjct: 177 TQQLINGIAGTDFMLKGETDELAALVSQQRVVREATIDVNAKAEKQQVSDAEITSYYDQH 236
Query: 183 V-LFSIPDN-----KLQNQGFVQKRIKDAEE--------------SRLRLPKDCNKLEKF 222
F P+ + + +Q+ + DA+ R+R K E
Sbjct: 237 KNNFVTPEQFRVSYIMLDAANIQQPVSDADIQAYYDQHQDQFTQPQRVRYSIIQTKTENE 296
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L +S + ++ K + +
Sbjct: 297 AKAVLDALNNGGDFAELAKEKSADIISARNGGDLGWLEDSTTPQELKDAGLKDKGQLSGV 356
Query: 261 YVTQKGVEYIAICDKRDLGGEIALK 285
+ G + + D + + +
Sbjct: 357 IKSSVGFLVVRLDDVQPAKVKTLAE 381
>gi|193064188|ref|ZP_03045272.1| peptidylprolyl isomerase [Escherichia coli E22]
gi|194428997|ref|ZP_03061529.1| peptidylprolyl isomerase [Escherichia coli B171]
gi|260842642|ref|YP_003220420.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str.
12009]
gi|192929217|gb|EDV82827.1| peptidylprolyl isomerase [Escherichia coli E22]
gi|194412934|gb|EDX29224.1| peptidylprolyl isomerase [Escherichia coli B171]
gi|257757789|dbj|BAI29286.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O103:H2 str.
12009]
gi|323160448|gb|EFZ46396.1| PPIC-type PPIASE domain protein [Escherichia coli E128010]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNEGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|239637879|ref|ZP_04678840.1| foldase protein PrsA [Staphylococcus warneri L37603]
gi|239596442|gb|EEQ78978.1| foldase protein PrsA [Staphylococcus warneri L37603]
Length = 330
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/254 (17%), Positives = 91/254 (35%), Gaps = 33/254 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+ + + +I + IA+ +++ + K + D+ ++ + + G
Sbjct: 43 VEDVMKKIGKDQIASKSFSIALDKILADKYKDK--------VDTKDIDKDIKKEEKQYGG 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
E F S L +QG+ + +K + + +++ K + EI K K +
Sbjct: 95 K-EQFESVLKQQGMSMDEYKDQKRLSAYQKELLN----DKIKVSDKEI---KDNTKKAS- 145
Query: 176 REYLIRTVLFSIPDNKLQNQGFV-QKRIKDAEESRLRLPKDCNKLEKFASKIH-----DV 229
+L + +G +K + AEE + + KD +K + A K
Sbjct: 146 ------HILIKVKSKDSDKEGLSDKKAKQKAEEIQKEVSKDPSKFGEIAKKESMDKSTAK 199
Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G Y+ + + F + L K + T T G I + D E K+ L
Sbjct: 200 KDGSLGYVTKGQMMESFDKALFKLKEGEVTKVVKTDYGYHIIKADKETDFNSE---KSNL 256
Query: 289 SAQNTPTKIEKHEA 302
++ KI+K
Sbjct: 257 KSKILEQKIQKDPK 270
>gi|170767918|ref|ZP_02902371.1| peptidylprolyl isomerase [Escherichia albertii TW07627]
gi|170123406|gb|EDS92337.1| peptidylprolyl isomerase [Escherichia albertii TW07627]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/333 (12%), Positives = 93/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDRYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G+SA+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNSILNQMGMSADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQAVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + +++ K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQEQFTQPQRMRYSIIQTKTEDE 281
Query: 205 AEE--SRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ + L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLAELNKGGDFAALAKEKSADIISARNGGDMGWLEDATVPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDVQPAKVKSLDEVRDDIAAK 374
>gi|154502709|ref|ZP_02039769.1| hypothetical protein RUMGNA_00522 [Ruminococcus gnavus ATCC 29149]
gi|153796592|gb|EDN79012.1| hypothetical protein RUMGNA_00522 [Ruminococcus gnavus ATCC 29149]
Length = 246
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 85/279 (30%), Gaps = 42/279 (15%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +I + G I + D K + + ++ Q+ + + +
Sbjct: 1 MEQKIIAVVAGREIKESDFEKFLQNVPREQQAYLSNPQFRQQCLDQFVAL---------- 50
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ F + L E++ ++ K+ + Q +V+K+ + +
Sbjct: 51 ------HMFAELGGEMKLEETEEYQEMVENA-------KRDILAQMTMREVMKDAVVTEE 97
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+Q K TVR + +L D+K + +
Sbjct: 98 DVKNYYEEHKQQFTKGETVR---AKHIL---TDSKEKCDAILAAIQSG--------ETSF 143
Query: 217 NKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
K S G + + +F++ P TQ G I + +
Sbjct: 144 EDAAKEKSTCPSGAKGGDLGEFGKGQMVKEFEDAAFTAEIGAIVGPVQTQFGYHLIKVEE 203
Query: 275 KRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
K+D + +K + Q + K ++ VK+LR
Sbjct: 204 KKDAAVADFEEVKNSIRNQLLQQRQNKVYSDKVKELREK 242
>gi|300022454|ref|YP_003755065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524275|gb|ADJ22744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hyphomicrobium
denitrificans ATCC 51888]
Length = 292
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 83/291 (28%), Gaps = 55/291 (18%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
A + +++G VI+ I+ + + GE A + L++ L QE +
Sbjct: 24 PAAPLVTPQVSVDGIVISSKAIAAEVQ-NFPSRNPGEGWLAAARALVIRELLLQEARRLN 82
Query: 95 ITFDS-NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
I + V+ + +V+
Sbjct: 83 IVAEPKADVDG-------------------------REETVDD---------ALVRGLIE 108
Query: 154 LKYGNLEMEIPANKQKMKN-----ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + + + +N + Y +L + + ++R
Sbjct: 109 REVRVPVADEATSHRFYENNRRRFTSAALYEADHILIGARRDDDASYAAARERATSIAAV 168
Query: 209 RLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKG 266
P +L + S + G + D +F L+ + + P T+ G
Sbjct: 169 LATEPDQFAELARAWSACPSATLGGSLGQIAPGDTTEEFEAALVSLAPGEISGPVETRYG 228
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK-LRSNAIIHY 316
V I + ++R G + +A + Y+ +R A Y
Sbjct: 229 VHVIRL-NRRIEGNTLPFEAVR----------ERIEAYLDDHVRRQATAQY 268
>gi|239616790|ref|YP_002940112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia
TBF 19.5.1]
gi|239505621|gb|ACR79108.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia
TBF 19.5.1]
Length = 673
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/253 (9%), Positives = 81/253 (32%), Gaps = 19/253 (7%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
++ + + +LI + + +K I + +N + S E++ + +++
Sbjct: 111 DVRYMVLLDLIDQKILIYYAKKHNIYPTEDEINTRVEEIVSKYT-SDENYKAQIEQYYGS 169
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKY-GNLEMEIPANKQKMKNITVREY---LIRTVLFS 186
FK+ + +P V+K +++ ++ ++ K+ +Y +L +
Sbjct: 170 VEAFKEKVRKSI-FPSVLKEKVQNDVLKDVDQKLKTYFEENKDEIKNKYERVEASHILLT 228
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
++ + + + ++ + V G + +F
Sbjct: 229 -------SEASALELKNELLNGAINFSDAASEFS--IDRNSAVLGGSLGSFGHGQMVKEF 279
Query: 247 QN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAE 303
++ + P T+ G I + + + + + Q +
Sbjct: 280 EDAAFSATPGEIVGPVETKYGFHLIKV-ATKTVFDTFDELKSSSAYDQFKNDYESDEFKK 338
Query: 304 YVKKLRSNAIIHY 316
+ + ++N Y
Sbjct: 339 WFENYKNNEKFGY 351
>gi|229102919|ref|ZP_04233612.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28]
gi|228680505|gb|EEL34689.1| Foldase protein prsA 1 [Bacillus cereus Rock3-28]
Length = 293
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 103/313 (32%), Gaps = 50/313 (15%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
S+ +L L +++ + S + T+ G V T+ ++ LK +
Sbjct: 6 SEVFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELKQKYGE 61
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L ++ + + +++ K V + G ++F L+K G+
Sbjct: 62 STLYQMVLSKALLDKYK----------VSDEEVTKQVKEAKDKMG---DNFKETLEKIGL 108
Query: 130 -GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 109 KNEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK-- 153
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
K +K+ ++ +D L K S+ G+ +F
Sbjct: 154 ------DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEIAGFGPGQTVKEF 203
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + + P T G I + DK++L +K + +++ ++
Sbjct: 204 EEAAYKLNAGQVSEPVKTSYGYHIIKVTDKKELKPFEEVKDKIRKDLEQQRLQDTTGKWK 263
Query: 305 ---VKKLRSNAII 314
V L +A I
Sbjct: 264 QQVVNDLLKDADI 276
>gi|184155805|ref|YP_001844145.1| peptidylprolyl isomerase [Lactobacillus fermentum IFO 3956]
gi|183227149|dbj|BAG27665.1| peptidylprolyl isomerase [Lactobacillus fermentum IFO 3956]
Length = 330
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 85/238 (35%), Gaps = 38/238 (15%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
T +G IT+ + + Q NG K +Q++I++ + + ++ G ++ V
Sbjct: 27 VATTSGGKITESEYYSSMK----QTSNG---KQVLQQMILDKVLE---KQYGSKVSTSEV 76
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
N + + + G S FS+ L ++G+ FKQ + + V+N L+ +
Sbjct: 77 NSEYNAYKKEYGSS---FSTVLSEEGLTAKSFKQQIRSNLLLKAAVRNYSTFSSSALKKQ 133
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
K+ + E L+ ++ Q I + K+ KL K
Sbjct: 134 W---KKYEPKVQTAEILVG------------SKETAQSIIDTLNNTSGSKLKEFKKLAK- 177
Query: 223 ASKIHDVSIGKAQYLLES------DLHPQFQN-LLKKSQNN-TTNPYVTQKGVEYIAI 272
SK D + ++ + L ++ TT P T G I +
Sbjct: 178 -SKSTDTTTKSNGGVVSAFDNTDTSLPSAYRKAAFALKTGEYTTEPVKTDNGYYVIYM 234
>gi|163848606|ref|YP_001636650.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aurantiacus J-10-fl]
gi|222526541|ref|YP_002571012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp.
Y-400-fl]
gi|163669895|gb|ABY36261.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aurantiacus J-10-fl]
gi|222450420|gb|ACM54686.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp.
Y-400-fl]
Length = 302
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 68/228 (29%), Gaps = 15/228 (6%)
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ A +G + E + + + F+Q + + + ++ +
Sbjct: 51 KRAIGDGVAN-ALASGQTREQVEQIVVENDLRRQIFEQMIQNELLLQYARQHGIGIDPAA 109
Query: 159 LEMEIPANKQKMKNITVRE----YLIRTVLFSIPDNKLQNQGFVQKR--------IKDAE 206
L+ EI A + + L R + + + R A
Sbjct: 110 LDAEIAARLPADADPAEVQDLRNVLAREQIVFAVIARNTRADMARARHILVADEATAQAT 169
Query: 207 ESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQ 264
+ L+ D L S+ + G + + PQF+ + NT T
Sbjct: 170 LAELQAGADFATLAAQRSQDTGSAANGGDLGWTPRGEFVPQFEEAIFSLPLNTPQIVQTD 229
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
G + + ++ + + +N ++ + ++LR A
Sbjct: 230 FGFHIVEVLERESQRPFSSFDDLRTRRNASQFYQETFVPWYEELRRQA 277
>gi|330503121|ref|YP_004379990.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina NK-01]
gi|328917407|gb|AEB58238.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina NK-01]
Length = 615
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/392 (12%), Positives = 108/392 (27%), Gaps = 91/392 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I + ++++ + + + +NG+ IT ++++ +
Sbjct: 1 MLQNIRDNSRGWIAKIIIGLIVMLMAFTGFEAIVTGTSNRNNAADVNGDTITLNELNQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + LQ++ + L + +++ LI L Q + F +++ +
Sbjct: 61 EMQRRQLLQQLGRDFDASLLDEKLLREASLKGLIERKLLLQAANDAHFAFSQGSLDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQ---------YLAIQSIWPDVVKNDFMLK 155
Q + A F + + G F+Q L V
Sbjct: 121 QTPEFQVDGRFDASRFDQVIRQMGYTRLQFRQMLEEEMLIGQLRAGLGASSFVTEQEARA 180
Query: 156 YGNLEMEIP--ANKQKMKNITVREYL-----------------IRTVLFS---------- 186
+ NLE + A+ + E V+
Sbjct: 181 FANLERQTRDFASLTIKADPAAVELNDADVKAYYDEHASEFMSPEQVVLEYVELQKDSFF 240
Query: 187 -----------------IPDNKLQNQGFVQKRIKDAEESRLRL---------PKDCNKLE 220
I + Q Q D E +R ++ +D L
Sbjct: 241 DQVEVSDEDLKPLYESEIANLAEQRQAAHILIEGDDEAARSKIEEIKKRVDAGEDFAALA 300
Query: 221 KFASKIHDVSI--GKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR- 276
K S+ ++ G Y P F+ L Q + P ++ G I + +
Sbjct: 301 KEFSQDPGSAVDGGDLGYAGPGVYDPAFEKALYALQQGQVSEPVKSEFGWHLIKLLGVQA 360
Query: 277 ------DLGGEIALKAYLSAQNTPTKIEKHEA 302
D + + AQ +
Sbjct: 361 PEVPSFDSLKDKLAR-DFKAQQVEQHFVEATK 391
>gi|255528699|ref|ZP_05395439.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
carboxidivorans P7]
gi|296188773|ref|ZP_06857156.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Clostridium
carboxidivorans P7]
gi|255507609|gb|EET84109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
carboxidivorans P7]
gi|296046636|gb|EFG86087.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Clostridium
carboxidivorans P7]
Length = 248
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 91/282 (32%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +++ +NG+ IT D+ I ++ + ++L+ E +
Sbjct: 1 MDNKVLAVVNGKEITQVDLDSTIKRFPNERQGYLQTEAGKKQLLEEIISF---------- 50
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+A++ + + S ++ + K+ + Q+ V++ ++
Sbjct: 51 ------ELIYNYAKDNNMEND--SDYIAQ----LEMAKKEILTQTAIAKVMQ-QVSVEDK 97
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+E ANK+ K + +L + + + +
Sbjct: 98 EVEDYYNANKENFKEPET--VSAKHILVESEEKAKEVAEEINA-----------GTTFED 144
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+K++S G + P+F+ + P TQ G I + DK
Sbjct: 145 AAKKYSSCPSKEQGGNLGKFGRGQMVPEFEEAAFALEIGTLSAPVKTQFGYHLIKVEDKS 204
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYV---KKLRSNAIIH 315
+ + S +N + E+ +Y K+LR +
Sbjct: 205 KGAVKSFEEVKNSIKNKLLQ-ERQSFKYTQLNKELRQKYDVQ 245
>gi|228945944|ref|ZP_04108286.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228813692|gb|EEM59971.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 288
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G IT+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 58 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E +I K+ E + +L
Sbjct: 105 NEDELKEKMKPEIAFEKAIKA------TVTEKDI-------KDNYKPEMKVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 149 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 260 QVVNELLKDADI 271
>gi|229184548|ref|ZP_04311751.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1]
gi|228598959|gb|EEK56576.1| Foldase protein prsA 1 [Bacillus cereus BGSC 6E1]
Length = 288
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G IT+ ++ LK +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELKQKYGES 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 58 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 149 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 260 QVVNELLKDADI 271
>gi|330808576|ref|YP_004353038.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376684|gb|AEA68034.1| putative peptidylprolyl isomerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 74/212 (34%), Gaps = 29/212 (13%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ + + V ++ QHA+ ++ + I K+ F
Sbjct: 201 ASVKLTDDEVKAYYDQHAKEF-MTPDQVV-------IDYLELKK-------------ASF 239
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + ++ A QK + +L + N + + +I++ ++RL
Sbjct: 240 FDQVSVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKVTEAQAKAKIEEI-QARLAK 296
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEY 269
+ L K S+ + G Y P+F+ L +++ + P T G+
Sbjct: 297 GESFEALAKEFSQDPGSANNGGDLGYAGPGVYDPEFEKALYALNKDQVSAPVRTDFGLHL 356
Query: 270 IAICDKR--DLGGEIALKAYLSAQNTPTKIEK 299
I + ++ +LK L+ + ++E+
Sbjct: 357 IKLLGVEAPEVPTFASLKDKLTRELKTQQVEQ 388
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 63/189 (33%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + + + +S +NGE I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFKATTNSNEAAKVNGENISQNELSQAV 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L A++ LI L Q + F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLRDSALKGLIDRKLLLQGAHDAKFAFSEAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + S E F + + G F+Q LA + + + + + ++
Sbjct: 121 QTPEFQVDGKFSPERFDQVIRQLGYSRMQFRQMLAQEMLIGQL-RAGLAGSGFVTDAQVL 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
>gi|317504767|ref|ZP_07962726.1| peptidyl-prolyl cis-trans isomerase [Prevotella salivae DSM 15606]
gi|315664098|gb|EFV03806.1| peptidyl-prolyl cis-trans isomerase [Prevotella salivae DSM 15606]
Length = 480
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 22/254 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIAL---LKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + E I DI + + L ++ K G + +++ V+ L + I
Sbjct: 54 DEVEWVVGDEPIMKSDIEQ-MRLQGEIEGMKWGGNPDCRIPEQIAVQKLFLHQAILDSIE 112
Query: 97 FDSNTVNYFFVQHARNTGL---SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---KN 150
+ + Q L S + QG + + L ++ K
Sbjct: 113 VTESDIAQTVEQ---QINLWINSVGSKEKLEEYQGKSISQIRSDLHDDVKNSKMIQQMKR 169
Query: 151 DFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
M ++ + + ++ E + +L P ++ ++++
Sbjct: 170 KIMGNVSVTPADVRRYFKNLPEDSIPFIPTEVEV-EILVRKPRIPQSEINRIKDQLRNFT 228
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYV 262
+ + + L + S+ S G+ Y L P F ++ +
Sbjct: 229 DRVNKGETSFSTLARLYSEDPGTSRQGGEMDYTGRGTLDPAFASVAFNLTDPKKISKIVE 288
Query: 263 TQKGVEYIAICDKR 276
++ G I + DKR
Sbjct: 289 SEFGYHIIQLIDKR 302
>gi|228914927|ref|ZP_04078532.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228927396|ref|ZP_04090453.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228933628|ref|ZP_04096478.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826088|gb|EEM71871.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228832292|gb|EEM77872.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228844723|gb|EEM89769.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 288
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G IT+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 58 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 149 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 260 QVVNELLKDADI 271
>gi|187732708|ref|YP_001879152.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella boydii
CDC 3083-94]
gi|187429700|gb|ACD08974.1| peptidylprolyl isomerase [Shigella boydii CDC 3083-94]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 90/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIHPAKVKSLDEVRDDIAAK 374
>gi|282851249|ref|ZP_06260614.1| PPIC-type PPIASE domain protein [Lactobacillus gasseri 224-1]
gi|282557217|gb|EFB62814.1| PPIC-type PPIASE domain protein [Lactobacillus gasseri 224-1]
Length = 303
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 92/298 (30%), Gaps = 33/298 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ I + + T G IT+ ++ + Q L + +
Sbjct: 13 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYNKMK--ESQAGQSTLASM----I 66
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + L+ Q G V+ + ++ + G F S L++ G+ + FK L
Sbjct: 67 VSDALESQ----YGKEVTQKQVDKEYNKYKKQYG---SQFDSVLEQNGMTASTFKDNLKT 119
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ PA ++K E ++ +L +K + K
Sbjct: 120 NLL--------TEAALKHIKKITPAQEKKAWKNYQPEVTVQHILV----SKKSTAEDIIK 167
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
++KD + K K + +D A +S L F+ K T
Sbjct: 168 QLKDGGD----FKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGEITT 223
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
P TQ G I + G K + Q + E + + A +
Sbjct: 224 TPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQSVMRSVIATVLKRADV 281
>gi|104781925|ref|YP_608423.1| hypothetical protein PSEEN2850 [Pseudomonas entomophila L48]
gi|95110912|emb|CAK15628.1| conserved hypothetical protein; putative signal peptide
[Pseudomonas entomophila L48]
Length = 213
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 13/144 (9%)
Query: 33 YKSWAMSSRIRTTINGEVI---------TDGDISKRIALLKLQKIN--GELEKIAVQELI 81
+ +NG I T+ ++ A+ ++ N L + A+ ELI
Sbjct: 12 VTPAIFAEAPVARVNGVEIGALRLERYFTEYLQAQGRAVASIRNPNLYQRLREQALDELI 71
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ L QE + GI D V + G S F+ L+ G + F Y +
Sbjct: 72 DKELLWQEARRQGIAIDDEQVRARVAEVEAAFG-SPAVFARRLEDAGFDHDSFADYTRHE 130
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPA 165
+ EI A
Sbjct: 131 MA-AQEAFARLTVVEEPSAAEIAA 153
>gi|282891870|ref|ZP_06300349.1| hypothetical protein pah_c200o014 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498130|gb|EFB40470.1| hypothetical protein pah_c200o014 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 354
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/323 (14%), Positives = 114/323 (35%), Gaps = 42/323 (13%)
Query: 22 LIIFCIVPIVSYKSWAMSS--------RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+ +P+ + S S R+ T NG++IT D+ K++ ++ +
Sbjct: 15 AALSSTIPLAAEPSLFRSQPEKIHVNNRVLATTNGKIITVMDVMKKMDIVFYRNFPEYAS 74
Query: 74 KI-------------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ +Q+LI + L + E+ + + V + D
Sbjct: 75 SVPARLQFYQTNWSDVLQDLIDKELVMADAEEMKLPLTNGDVRQEMEEIFG------PDI 128
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDV----VKNDFMLKYGNLEMEIPANKQKMKNITVR 176
LD+ G+ + + I + V + ++ + +N+ +
Sbjct: 129 IHNLDRAGLTYDEAWNSIKGDIIIRRMLYYRVNTKAQAQATPQAIQTAYEQYAKENVRPK 188
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQ 235
E+ + + + + + +++ +++ + L+K+ I V++
Sbjct: 189 EWTYYMISVR-DEQDEKGAKIANQIYQQLQKTPVKIETLQDNLKKWLGDNIAQVNVSTKF 247
Query: 236 YLLESDLHPQFQNLLKK-SQNNTTNP-----YVTQKGVEYIAICDKRDLGGEIAL---KA 286
+E+++ + + +L S N + P T+ V + D + GG K
Sbjct: 248 SHMENEVSDENKQILATLSPGNYSKPIAQKSRATKSTVYRLFYLDSMNPGGAPPFDEVKD 307
Query: 287 YLSAQNTPTKIEKHEAEYVKKLR 309
+ + T I K A Y+++LR
Sbjct: 308 EIKSYLTDEAISKETASYLERLR 330
>gi|254690082|ref|ZP_05153336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
6 str. 870]
gi|256258335|ref|ZP_05463871.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
9 str. C68]
gi|260755622|ref|ZP_05867970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
6 str. 870]
gi|260884648|ref|ZP_05896262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
9 str. C68]
gi|297247182|ref|ZP_06930900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
5 str. B3196]
gi|260675730|gb|EEX62551.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
6 str. 870]
gi|260874176|gb|EEX81245.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
9 str. C68]
gi|297174351|gb|EFH33698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
5 str. B3196]
Length = 331
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMVGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|24111825|ref|NP_706335.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella flexneri
2a str. 301]
gi|30061943|ref|NP_836114.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Shigella flexneri
2a str. 2457T]
gi|24050617|gb|AAN42042.1| putative protease maturation protein [Shigella flexneri 2a str.
301]
gi|30040187|gb|AAP15920.1| putative protease maturation protein [Shigella flexneri 2a str.
2457T]
gi|281599781|gb|ADA72765.1| putative protease maturation protein [Shigella flexneri 2002017]
gi|332760732|gb|EGJ91020.1| PPIC-type PPIASE domain protein [Shigella flexneri 4343-70]
gi|332761539|gb|EGJ91821.1| PPIC-type PPIASE domain protein [Shigella flexneri 2747-71]
gi|332768363|gb|EGJ98547.1| PPIC-type PPIASE domain protein [Shigella flexneri 2930-71]
gi|333008057|gb|EGK27533.1| PPIC-type PPIASE domain protein [Shigella flexneri K-218]
gi|333021934|gb|EGK41182.1| PPIC-type PPIASE domain protein [Shigella flexneri K-304]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 92/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPA--NKQ 168
G+ F LA VV+ N K E EI + +
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGF------VQKRIKDAEESRLRLPKDCNKLEKF 222
K +T ++ + + + Q + + + R R K E
Sbjct: 222 KNNFMTPEQFRVSYIKLVAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|116619198|ref|YP_821354.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|116222360|gb|ABJ81069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
Length = 644
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/406 (10%), Positives = 114/406 (28%), Gaps = 102/406 (25%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSW----AMSSRIRTTINGEVITDGDISKRI 60
+F S +++L + ++ + ++ + S + I + IT ++ + I
Sbjct: 4 LFRSRDKMVRILLGALLGVVALSMLTYLVPNYNTGSSTSDVVVAEIGKDTITLPEMQRVI 63
Query: 61 -ALLKLQKINGEL----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---------- 105
A ++ +++ E+ V +++ E E E+ G V
Sbjct: 64 QATIRGRQLPTEILPTYIPQMVDQMVTERAMAMEAERLGYQVSDADVADSIRQMVPSLFP 123
Query: 106 ---------FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL------------------ 138
+ ++ + F + L +Q + + F+
Sbjct: 124 DGKFVGKETYAAMLAQQNMTIDQFEADLKRQ-VAISRFRDIAMEGTIVTPAEIEAAFKKK 182
Query: 139 --AIQSIWPDVVKNDFMLKYGNLEMEIP------------ANKQKMKNITVREYLIR--- 181
I+ W + + + + E+ K+ + +T E +
Sbjct: 183 NEKIKVEWVKLTADKYKGESQPSAQELQDFYKANVSRYTVPEKRNLTVLTADEAKMSASL 242
Query: 182 ---------------------------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+L + ++ ++ +++
Sbjct: 243 NITDADLQRVYDQNKEAFRTPERVKARHILLKTQGKPASEEAAIKA-KGESLLKQIKAGG 301
Query: 215 DCNKLEKFASKIHD--VSIGKAQ-YLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270
D KL K S+ V+ G ++ + +F + + ++ TQ G +
Sbjct: 302 DFAKLAKENSEDPGSAVNGGDLGDWITHGQMVAEFDKAIFALKPGEVSDLVKTQYGYHIV 361
Query: 271 AICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEYVKKLRS 310
K+D G + Q +++ L+
Sbjct: 362 QTLAKQDAGMRTFAEVKGDLATQYKKQRVSELMQQASDRAQAALQK 407
>gi|313646932|gb|EFS11389.1| PPIC-type PPIASE domain protein [Shigella flexneri 2a str. 2457T]
gi|332763740|gb|EGJ93978.1| PPIC-type PPIASE domain protein [Shigella flexneri K-671]
Length = 622
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 92/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 41 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 100
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 101 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 160
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPA--NKQ 168
G+ F LA VV+ N K E EI + +
Sbjct: 161 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 220
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGF------VQKRIKDAEESRLRLPKDCNKLEKF 222
K +T ++ + + + Q + + + R R K E
Sbjct: 221 KNNFMTPEQFRVSYIKLVAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 280
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L ++ + + +N K + +
Sbjct: 281 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 340
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 341 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 373
>gi|29349254|ref|NP_812757.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570400|ref|ZP_04847809.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6]
gi|29341162|gb|AAO78951.1| peptidyl-prolyl cis-trans isomerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840781|gb|EES68863.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_6]
Length = 514
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 93/292 (31%), Gaps = 45/292 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++ + + ++A + ING+ I + + +G
Sbjct: 6 LLLGWISLFGVLAFAQEDPVVMRINGKDIPRSEFEYSYR----RHADGN----------- 50
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
G+ + + + L E + G + + Q
Sbjct: 51 -----------GMKLSPKE----YAEFFIQSKLKVEAARAA------GLDTTSAFRKQQE 89
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + ++L ++ QKMK N+ + I+ + +P ++
Sbjct: 90 AYRTNLLRSYLLDDQEMDGNARILYQKMKENVRGGQVQIQQIYKYLPQTITSRHLQEEQA 149
Query: 202 IKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
D+ + + + D +L S + +++ +F+ ++ +
Sbjct: 150 RMDSIYQVIQNQPGVDFARLVDRFSDDK-----RCRWIESLQTTSEFEEAAFSLAKGEIS 204
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
P+ T +G+ + + D++++ + L + ++K V++L+
Sbjct: 205 KPFFTPEGIHILKVIDRKEVPAYEVVSDSLLNRLRRQPLDKGTEAIVEQLKK 256
>gi|110804469|ref|YP_687989.1| peptidyl-prolyl cis-trans isomerase [Shigella flexneri 5 str. 8401]
gi|110614017|gb|ABF02684.1| putative protease maturation protein [Shigella flexneri 5 str.
8401]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 92/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQIDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPA--NKQ 168
G+ F LA VV+ N K E EI + +
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGF------VQKRIKDAEESRLRLPKDCNKLEKF 222
K +T ++ + + + Q + + + R R K E
Sbjct: 222 KNNFMTPEQFRVSYIKLVAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|119471187|ref|ZP_01613719.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)
[Alteromonadales bacterium TW-7]
gi|119445843|gb|EAW27125.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)
[Alteromonadales bacterium TW-7]
Length = 633
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 66/199 (33%), Gaps = 21/199 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + + V++ F + I SY + +NG I+ + ++
Sbjct: 1 MLEKIREGSQGPVAKIILGAVILSFALAGIGSYLGQTTEQPV-AEVNGVKISQTEFNRAY 59
Query: 59 ---RIA--------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R ++ ++ + + L+ + L+ Q + G+ +TV
Sbjct: 60 QNERNRLEQQFGEYFTQIAADPNYMAQIRQGVIDRLVQQELQSQLAAELGLRVSDDTVRK 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ + + + + + + F++YL +V LE
Sbjct: 120 TILELPYFQLGDKFNNDRYLQVIRQMNFQPDTFREYLREDMTRSQLVSA-VAGTDFALES 178
Query: 162 EIPANKQKMKNITVREYLI 180
E+ + + +YL+
Sbjct: 179 ELKSAIALQQQTRSIDYLV 197
>gi|285808228|gb|ADC35762.1| peptidyl-prolyl [uncultured bacterium 293]
Length = 640
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 61/209 (29%), Gaps = 14/209 (6%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKIN 69
+L + I +P + E IT G+ +R AL +
Sbjct: 16 MLLAVVLAFILLYIPAFQAGPGGGPGEEVARVGQEKITAGEFDRAFSRQRDALREQGVDP 75
Query: 70 GELEK-----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARNTG--LSAEDFS 121
LE+ + LI L QE + G+ D V + + G + ++
Sbjct: 76 AMLEQLGVREEVLNGLIDGKLIVQEARRLGLAVDDEAVAAQIHREYQSRGGEFVGTDEIR 135
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
L QGI ++ + + Q + + + + ++ EY+
Sbjct: 136 RRLALQGISEDEKAEQVREQLLVQRLY-ALVTDGVHVSDQDAEKEFRRSSEKVKVEYVAV 194
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
++ + E R+
Sbjct: 195 DAAPFATRATATDEEVAARFQSRREAYRI 223
>gi|256059916|ref|ZP_05450102.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae
5K33]
gi|261323889|ref|ZP_05963086.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae
5K33]
gi|261299869|gb|EEY03366.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella neotomae
5K33]
Length = 328
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 54/280 (19%), Positives = 89/280 (31%), Gaps = 47/280 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ TING+ IT G++ + L Q +E+ + LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALIDIKAMAGEAEKDKLDQTK 120
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ FL ++ + + +FK + + I V+ +
Sbjct: 121 --------EFKDRM--------EFLCERALHNEYFKNAI-VDKISDADVRARY------- 156
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+K+ E R +L + +A +L L
Sbjct: 157 ------DKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKFEDL 198
Query: 220 EKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKR 276
K +S S G Y E + P+F+ T P TQ G I + D+R
Sbjct: 199 AKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLEDRR 258
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ Q + + E VKKLR I Y
Sbjct: 259 TKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 296
>gi|120599410|ref|YP_963984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
W3-18-1]
gi|146292594|ref|YP_001183018.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
putrefaciens CN-32]
gi|120559503|gb|ABM25430.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella sp.
W3-18-1]
gi|145564284|gb|ABP75219.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
putrefaciens CN-32]
gi|319425896|gb|ADV53970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
putrefaciens 200]
Length = 618
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 56/190 (29%), Gaps = 21/190 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ I V++ F + SY + + +NG+ IT ++ +
Sbjct: 1 MLEKIRDGSQGVIAKSILVLVILSFAFAGVSSY-LGSTTDVPAAEVNGDKITKAELEQAY 59
Query: 59 ---RIALLKLQ-----------KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R + + + +++ ++ L+ + L Q G+ +
Sbjct: 60 QSERSRMEQQLGEMFAALSADERYLESIKQSVLERLVADKLIDQAASTMGLRVSDEQIIT 119
Query: 105 FFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLE 160
+ E + + L + G F+ + + + + E
Sbjct: 120 AIKLEPAFQTDGKFDNERYQAILRQLGYQPQSFRNMMRVDMTRRQLTAALVGTEFVLPSE 179
Query: 161 MEIPANKQKM 170
+ A Q
Sbjct: 180 AKQLAELQGQ 189
>gi|229121887|ref|ZP_04251106.1| Foldase protein prsA 1 [Bacillus cereus 95/8201]
gi|228661536|gb|EEL17157.1| Foldase protein prsA 1 [Bacillus cereus 95/8201]
Length = 288
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G IT+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 58 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKVKMG---DNFKSTLEQVGLK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 149 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 260 QVVNELLKDADI 271
>gi|333008127|gb|EGK27602.1| PPIC-type PPIASE domain protein [Shigella flexneri VA-6]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/333 (13%), Positives = 92/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPA--NKQ 168
G+ F LA VV+ N K E EI + +
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGF------VQKRIKDAEESRLRLPKDCNKLEKF 222
K +T ++ + + + Q + + + R R K E
Sbjct: 222 KNNFMTPEQFRVSYIKLVAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|291281348|ref|YP_003498166.1| Peptidylprolyl isomerase [Escherichia coli O55:H7 str. CB9615]
gi|209743820|gb|ACI70217.1| putative protease maturation protein [Escherichia coli]
gi|290761221|gb|ADD55182.1| Peptidylprolyl isomerase [Escherichia coli O55:H7 str. CB9615]
gi|320661211|gb|EFX28642.1| periplasmic folding chaperone [Escherichia coli O55:H7 str. USDA
5905]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADLQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ ++A K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 374
>gi|86158923|ref|YP_465708.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85775434|gb|ABC82271.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 524
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/336 (11%), Positives = 87/336 (25%), Gaps = 68/336 (20%)
Query: 46 INGEVITDGDISKR----IALLKLQKINGELEK---------IAVQELIVETLKKQEIEK 92
+NG+ I+ D ++ + + Q G + A+ L+ L QE +
Sbjct: 51 VNGKSISAADFERQYENLLRFYQQQAGEGFTRELAAQLGLGRQAMGVLVDRELALQEARR 110
Query: 93 SGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
G+ V+ Q N E + + +F+ + ++ ++
Sbjct: 111 RGVVVTDREVSEAVHQMPAFQENGQFRYETYLEAVRANYGSPGNFEAAVRDDLLYQKILG 170
Query: 150 N----------------------------DF-----MLKYGNLEMEIPANKQKMKNITVR 176
F + + + A +
Sbjct: 171 ALVETVKVPATEVRAQWAASADRAALKFVRFPISAAQAEVKVSDADAKAFADREGARVEA 230
Query: 177 EY-------------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Y +R VL + ++ ++ D +R++ +D K+
Sbjct: 231 FYKENADRYDQKAKVHVRHVLARVAPGASADEEAAARKKIDEAAARVKKGEDFAKVAAAL 290
Query: 224 SKIHDV--SIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI---AICDKRD 277
S + G ++ E + L + P T G I + R
Sbjct: 291 SDDPNTKDRGGDLGFVSEGLADAAFAKAALALKAGQVSEPVRTPAGWHLIRAEEVVPARQ 350
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ E A + + E + A
Sbjct: 351 VTLEAARLDIARELVARDRAQALAREKAQAALDAAR 386
>gi|260866602|ref|YP_003233004.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str.
11128]
gi|257762958|dbj|BAI34453.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O111:H- str.
11128]
gi|323178290|gb|EFZ63868.1| PPIC-type PPIASE domain protein [Escherichia coli 1180]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSLYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKVVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|301054383|ref|YP_003792594.1| peptidylprolyl isomerase [Bacillus anthracis CI]
gi|300376552|gb|ADK05456.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI]
Length = 280
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 103/304 (33%), Gaps = 48/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+ + +S + S I TT +G I++ D +K+ LK L ++
Sbjct: 3 RKKIVIGSILMGMTLSLSACGSSDNIVTTKSGS-ISESDFNKK---LKENYGKQNLSEMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
V++++ + K V + G +F+++++ G+ ++ K
Sbjct: 59 VEKVLNDKYK----------ATDEEVTKQIKELKTKMG---NNFNTYMESNGVKNEDQLK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + +K E EI K+ + +L
Sbjct: 106 EKLKLTFAFEKAIKA------TVTEKEI-------KDHYKPKLQASHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
K IK+ +L +D L K S+ G + +F++ K
Sbjct: 145 EKTAKEIKE----KLNNGEDFAALAKQYSEDPGSKEKGGDLSEFGPGMMVKEFEDAAYKL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRS 310
+ + P + G I + K++L K + + +I+ + + + +
Sbjct: 201 EVGQVSEPIQSSFGYHIIKLTGKKELKPYEEEKVNIRKELEQQRIQDPQFHQQVTRDILK 260
Query: 311 NAII 314
NA I
Sbjct: 261 NADI 264
>gi|118594828|ref|ZP_01552175.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales
bacterium HTCC2181]
gi|118440606|gb|EAV47233.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales
bacterium HTCC2181]
Length = 627
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/395 (13%), Positives = 112/395 (28%), Gaps = 94/395 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ S + + ++I F + I SY S S+ +NG I+
Sbjct: 1 MLDKIRNSTDSKLAKVILAIIIIPFALFGIDSYLSSVGSNVYIAKVNGVDISAQQYQNTE 60
Query: 61 ALLKLQKINGEL----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFV 107
A+++ Q + +K + LI L Q I+K+G + ++
Sbjct: 61 AMIREQMTDPNTDPALFDSPEFKKAVLDNLISTELMNQSIDKNGFVISNEQLSSYIVGMP 120
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD------------------VVK 149
N S E + + + + + Q +V
Sbjct: 121 DFQENGKFSQERYDQIVQYNNLTPKKLEDRIRTQMATQQAKDSINRLIYVPNEITQPLVN 180
Query: 150 NDFMLK-YGNLEMEIPANKQKMKNI--------------------TVREYLIRTVLFSIP 188
+ + E+ + K+K+K E+LI +V +P
Sbjct: 181 LAYQKRDISLHEIRLDDYKKKIKPTDDEVKQFYDENTSNFIMPDRVKIEFLIYSVAGIVP 240
Query: 189 DNKLQNQGFVQ-----KRIKDAEESR--------------------------------LR 211
+ N+ Q K +A + R +
Sbjct: 241 TISVSNEEARQFFDANKGKFEANQQRRAKHILFAYQPGIDFEEKARIRDLAQTTLNEIKK 300
Query: 212 LPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
PK K S+ + + G + D+ F + + + + T+ G+
Sbjct: 301 SPKIFENKVKELSQDTESAKQGGDLGFFSRGDMVKPFADAVFGLKVDGLSGLVETEFGLH 360
Query: 269 YIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHE 301
I + D + + + ++++
Sbjct: 361 IIKLTDIKGEQVSFDKIKTQIKGELLYGKALDQYA 395
>gi|281423985|ref|ZP_06254898.1| peptidyl-prolyl cis-trans isomerase [Prevotella oris F0302]
gi|281401910|gb|EFB32741.1| peptidyl-prolyl cis-trans isomerase [Prevotella oris F0302]
Length = 477
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 88/262 (33%), Gaps = 46/262 (17%)
Query: 24 IFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE- 79
+ + ++ Y S A S + T+NG+ + + + G +++ +V+E
Sbjct: 7 VIISLAMLLYGSMAFSQSNDPVVMTVNGKPVLRSEFE---YAYRKNNSAGVIDRKSVEEY 63
Query: 80 ---LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
I LK + + + +T+ F + A Q
Sbjct: 64 AELFIDYKLKVEAALAAQL----DTLTSFKEEFAGCRD---------------------Q 98
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ I ++ + Y + ++ + +K +R +L + ++
Sbjct: 99 QIRPSLINDADIEAEARRIYTLTQHQVDSLGGMVK--------VRHILLGLGQRAPKSTE 150
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQF-QNLLKKS 253
K+ D+ L+ D +++ + S + G +L P+F +
Sbjct: 151 TEVKQRIDSIYKALKAGADFSEMARKYSDDKGSALAGGSLPWLQPGQTLPEFEAQAYRLK 210
Query: 254 QNNTTNPYVTQKGVEYIAICDK 275
+ + P+++ G I + DK
Sbjct: 211 KGEMSLPFLSPAGYHIILLEDK 232
>gi|52783929|ref|YP_089758.1| YacD [Bacillus licheniformis ATCC 14580]
gi|163119182|ref|YP_077358.2| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
licheniformis ATCC 14580]
gi|319648596|ref|ZP_08002810.1| YacD protein [Bacillus sp. BT1B_CT2]
gi|52346431|gb|AAU39065.1| YacD [Bacillus licheniformis ATCC 14580]
gi|145902685|gb|AAU21720.2| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
licheniformis ATCC 14580]
gi|317389363|gb|EFV70176.1| YacD protein [Bacillus sp. BT1B_CT2]
Length = 296
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 101/298 (33%), Gaps = 25/298 (8%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
++I ++ S + + + I IT + L ++ K ++++
Sbjct: 18 CIVIAYVLTKAQTASSSSAQEVIAHIGKNGITREE--------WLSEMEERYGKSTLEDM 69
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + + Q EK+ I + + F+ L ++SF + + + +K+ +
Sbjct: 70 INDRVVTQMAEKNKIKVSDDDIEREFL-------LIKAVYNSFYEDENTTEKEWKEQIKH 122
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ D ++ L+ NK K Y ++ ++ ++ ++
Sbjct: 123 NILLEELLTKDIVISDSELKSFYNKNKDLYKFDDS--YRLKHIVVK-------DKDEAEQ 173
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN-TTN 259
+K+ +E + + +G E+ + + +N
Sbjct: 174 VLKELKEGSSFEAAAAEHSTDRYTAPYGGDLGFVNDQHENVPAEYLEKAEQLKENQWVDE 233
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
P T +G I + +K + + + + VK L +A + ++
Sbjct: 234 PIKTSQGYAIIQLKEKLPGQAFTYSEVKNQIRRQIAMDQLGDKASVKTLWKDAKLSWF 291
>gi|332523128|ref|ZP_08399380.1| putative foldase protein PrsA [Streptococcus porcinus str.
Jelinkova 176]
gi|332314392|gb|EGJ27377.1| putative foldase protein PrsA [Streptococcus porcinus str.
Jelinkova 176]
Length = 313
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 32/271 (11%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
KL+T + L + S + S T+ G+ IT D K
Sbjct: 6 KLVTGFVTLASVMTLAACSSTN---DSTKVVTMKGDTITVTDFYKEAK-------TSTAA 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ LI+ + +QE G V + + A+ G S FS L + G+
Sbjct: 56 QQSMLSLIMSRVFEQE---YGKKVSDKKVEESYNKTAKQYGSS---FSDALGQAGLTTET 109
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+K+ + + ++ +K + AN +K E + ++
Sbjct: 110 YKKQIRTTML------VEYAVKQEAKKELTDANYKKAFENYSPEMTTQVIIM-------D 156
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
++ +K +++ + K + ++K D + A L SD+ L + +
Sbjct: 157 DEAKAKKVLEEVKAEGADFSKIAKENTVESAKKLDFTFDSAGTNLPSDVISAAGKLNEGA 216
Query: 254 QNNTTN---PYVTQKGVEYIAICDKRDLGGE 281
++ P QK + + K + +
Sbjct: 217 KSELITVMDPSTYQKKYYIVNMVKKAEKKAD 247
>gi|121997400|ref|YP_001002187.1| hypothetical protein Hhal_0599 [Halorhodospira halophila SL1]
gi|121588805|gb|ABM61385.1| conserved hypothetical protein [Halorhodospira halophila SL1]
Length = 524
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 51/173 (29%), Gaps = 16/173 (9%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M + + +I + F+ + F + Y + ++GE I I +
Sbjct: 1 MLQAIRDGIKGWIAWVIIGFIALPFIFMGGYEYFGGGQDDAVVARVDGEEIPRSQIDQAV 60
Query: 59 ---RIALLKLQKI--------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
R L ++ L + A+++LI E L + K G+ V
Sbjct: 61 ERQRAQLREMFGGDLPDGAFDGAALRREALEQLIDEQLLHAYVGKQGLRVTDQEVAQTIR 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
S + + L++ + ++ + + F
Sbjct: 121 GQEIFHEGGQFSRARYQTLLERNRLTPEDYEGLVRRDLKADQFQQAVFASSIS 173
>gi|207724194|ref|YP_002254592.1| peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum MolK2]
gi|206589405|emb|CAQ36367.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum
MolK2]
Length = 648
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/400 (12%), Positives = 103/400 (25%), Gaps = 106/400 (26%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKL 65
+ L+ V F + Y + S + VIT ++ R+ L ++
Sbjct: 10 RLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDARVREQTERLRQM 69
Query: 66 QKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-- 115
+ + + +I + + E ++ ++ V Q L
Sbjct: 70 LGGQYDPRQFEGPQMRRDVLDGIIQQRMMVNEASRTNLSVADTKVRETIEQIPAVAQLRK 129
Query: 116 -----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFML--------KYGN 158
+ + L QG+ F L + + +V + F+ + +
Sbjct: 130 PDGKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKSLVDRLIEARD 189
Query: 159 LEMEIPANKQKMKNITVRE----------YLIRTVLFSIPDNKLQN-------------- 194
+ E+ A K + + Y F++P+
Sbjct: 190 QQREVQALLLKPADYASKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIP 249
Query: 195 -------------------------------------QGFVQKRIKDAEESRLRLPKDCN 217
K AEE + K
Sbjct: 250 VTPEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKTPG 309
Query: 218 KLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
+ A K G+ +L + PQF + L K + ++ + G I
Sbjct: 310 NFAELAKKYSGDPGSAAQGGELGFLAKGATVPQFDSALFALKQPGDISDVVQSDFGFHII 369
Query: 271 AICDKRDLGGEIA------LKAYLSAQNTPTKIEKHEAEY 304
+ + + G + L+ + Q K + +
Sbjct: 370 KLEEVKGGGVQSLEAVKPELEREVRTQLANKKYTELADAF 409
>gi|222111223|ref|YP_002553487.1| ppic-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus
TPSY]
gi|221730667|gb|ACM33487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus
TPSY]
Length = 261
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 57/309 (18%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + + + + + + +NG+ + +R +LK Q
Sbjct: 1 MKKKLLSGLVAAAVLGTMALPVAAQNL-AIVNGKAVP----KERAEVLKQQVERSGRPVT 55
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
ELE +E+I + QE +K G+ + L
Sbjct: 56 PELENQIKEEVIAREIFMQEAQKRGLEGS--------ADYKAQMEL-------------- 93
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIP 188
A Q+I + DF + EI A K + +EY +L
Sbjct: 94 ---------ARQTILIRELFVDFQKNNAVTDAEIQAEYDKFVAANAGKEYKASHILV--- 141
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-Q 247
+ + + + + K + + + + G + S +F +
Sbjct: 142 EKEDEAKAIIASIKKGGKFEDIAKKQSKDPG-------SGARGGDLDWASPSSYVAEFTE 194
Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
L+K + T P +Q G I + D R+ ++ + Q ++ A++ +
Sbjct: 195 ALVKLEKGKMTQTPVKSQFGWHVIRLDDVRE--AQLPKLEEVKPQIAQQLQQQKLAKFQE 252
Query: 307 KLRSNAIIH 315
LR+ A +
Sbjct: 253 DLRAKAKVE 261
>gi|257066380|ref|YP_003152636.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus
prevotii DSM 20548]
gi|256798260|gb|ACV28915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaerococcus
prevotii DSM 20548]
Length = 249
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/274 (13%), Positives = 91/274 (33%), Gaps = 46/274 (16%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITFD 98
++ +NG+ I D+ + + ++ ++ + E KI E+I + + ++ G+ D
Sbjct: 7 KLLAEVNGKKIYTSDVYQLMNSIEDRERFNSEEGIKILADEMINQEILLKDAYDEGLDQD 66
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V + L ++ I D+ K+Y
Sbjct: 67 EEFVKEL--DLVKTNMLKNYAMHKIFEEVNINDDEIKKYYE------------------- 105
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+E + +L+ +++ +K + E + +
Sbjct: 106 ---------------ENKETINPPILYEASHILVKDLETAEKVRGEIE----KGLSFEDA 146
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+K++ + G + + +FQ L + + P +Q G I + +K +
Sbjct: 147 AKKYSIDPSKENGGSLGKFPKGVMVKEFQEGLDAIEVGEISAPVKSQFGYHLIKLTNKEN 206
Query: 278 LGGEIALKAYLSAQNTPTK-IEKHEAEYVKKLRS 310
+ E + +Q + K + Y++KL
Sbjct: 207 V--ETPKFEEIKSQVGQRLIMAKRQEAYLEKLGK 238
>gi|195936005|ref|ZP_03081387.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
O157:H7 str. EC4024]
Length = 608
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 27 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 86
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 87 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 146
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 147 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 206
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 207 KNNFMTPEQFRVSYIKLDAATMQQPVSDADLQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 266
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 267 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 326
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ ++A K
Sbjct: 327 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 359
>gi|15800171|ref|NP_286183.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
O157:H7 EDL933]
gi|15829749|ref|NP_308522.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
O157:H7 str. Sakai]
gi|168747883|ref|ZP_02772905.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4113]
gi|168754546|ref|ZP_02779553.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4401]
gi|168760404|ref|ZP_02785411.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4501]
gi|168768396|ref|ZP_02793403.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4486]
gi|168777137|ref|ZP_02802144.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4196]
gi|168778934|ref|ZP_02803941.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4076]
gi|168786292|ref|ZP_02811299.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC869]
gi|168798005|ref|ZP_02823012.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC508]
gi|208809217|ref|ZP_03251554.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4206]
gi|208815330|ref|ZP_03256509.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4045]
gi|208823220|ref|ZP_03263538.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4042]
gi|209395856|ref|YP_002269088.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4115]
gi|217325591|ref|ZP_03441675.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. TW14588]
gi|254791625|ref|YP_003076462.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7
str. TW14359]
gi|261223924|ref|ZP_05938205.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7
str. FRIK2000]
gi|261256362|ref|ZP_05948895.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7
str. FRIK966]
gi|12513303|gb|AAG54791.1|AE005223_6 putative protease maturation protein [Escherichia coli O157:H7 str.
EDL933]
gi|13359952|dbj|BAB33918.1| putative protease maturation protein [Escherichia coli O157:H7 str.
Sakai]
gi|187767557|gb|EDU31401.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4196]
gi|188017729|gb|EDU55851.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4113]
gi|189002976|gb|EDU71962.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4076]
gi|189357979|gb|EDU76398.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4401]
gi|189362425|gb|EDU80844.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4486]
gi|189369155|gb|EDU87571.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4501]
gi|189373538|gb|EDU91954.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC869]
gi|189379237|gb|EDU97653.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC508]
gi|208729018|gb|EDZ78619.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4206]
gi|208731978|gb|EDZ80666.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4045]
gi|208737413|gb|EDZ85097.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4042]
gi|209157256|gb|ACI34689.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. EC4115]
gi|209743814|gb|ACI70214.1| putative protease maturation protein [Escherichia coli]
gi|209743816|gb|ACI70215.1| putative protease maturation protein [Escherichia coli]
gi|209743818|gb|ACI70216.1| putative protease maturation protein [Escherichia coli]
gi|209743822|gb|ACI70218.1| putative protease maturation protein [Escherichia coli]
gi|217321812|gb|EEC30236.1| peptidylprolyl isomerase [Escherichia coli O157:H7 str. TW14588]
gi|254591025|gb|ACT70386.1| peptidyl-prolyl cis-trans isomerase D [Escherichia coli O157:H7
str. TW14359]
gi|320192857|gb|EFW67497.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli O157:H7
str. EC1212]
gi|320638436|gb|EFX08150.1| periplasmic folding chaperone [Escherichia coli O157:H7 str. G5101]
gi|320643817|gb|EFX12940.1| periplasmic folding chaperone [Escherichia coli O157:H- str.
493-89]
gi|320649168|gb|EFX17746.1| periplasmic folding chaperone [Escherichia coli O157:H- str. H
2687]
gi|320656061|gb|EFX23977.1| periplasmic folding chaperone [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320665187|gb|EFX32280.1| periplasmic folding chaperone [Escherichia coli O157:H7 str.
LSU-61]
gi|326341205|gb|EGD64997.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli O157:H7
str. 1044]
gi|326346020|gb|EGD69759.1| Peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli O157:H7
str. 1125]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADLQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ ++A K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDVAAK 374
>gi|39934430|ref|NP_946706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris CGA009]
gi|39648279|emb|CAE26799.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris CGA009]
Length = 347
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 60/158 (37%), Gaps = 5/158 (3%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ +++ + R++ + + +P ++ ++ K ++ + +L
Sbjct: 170 SDEDLQKVYEANRAAFAMPRQFELAQIY--VPLSRDADKAAEDAARKSVDDIQRKLKAPG 227
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDK 275
AS+ D + G +++E+ + P+ + +++ ++N + P G +I + D
Sbjct: 228 ADFSAIASEAGDANAGALGWVVENQIRPEIRTKVMELAKNAISEPIKLDDGWHFIKVLDT 287
Query: 276 RDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ ++ L Q + Y+ +L
Sbjct: 288 KAPYTRTLPEVRDGLVQQIRSERSAALRRAYLAELLKQ 325
>gi|17546434|ref|NP_519836.1| peptidyl-prolyl cis-trans isomerase transmembrane protein
[Ralstonia solanacearum GMI1000]
gi|17428732|emb|CAD15417.1| probable peptidyl-prolyl cis-trans isomerase transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 648
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/324 (10%), Positives = 92/324 (28%), Gaps = 45/324 (13%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKL 65
+ L+ V F + Y + S + VIT ++ R+ L ++
Sbjct: 10 RLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDTRVREQTERLRQM 69
Query: 66 QKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-- 115
+ + + +I + + E ++ ++ + V Q L
Sbjct: 70 LGAQYDPRQFEGPQMRRDVLDGIIQQRVMVNEASRANLSVADSKVRETIEQIPAVAQLRK 129
Query: 116 -----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPAN 166
+ + L QG+ F L + + +V + F+ K + +
Sbjct: 130 PDGKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKSLVDRLIEARD 189
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+Q+ ++ +LF D + + + + + +
Sbjct: 190 QQRE---------VQALLFKPADYAAKVTVDDKAIQAYYDAHQQEF-----AVLEQVKAE 235
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI------AICDKRDLGG 280
+ V G+ Q + ++ ++ + A +D
Sbjct: 236 YVVFSGEEMMKQIPVTPEQLKEYYDQNAARF-KTEEQRRAAHILIKLPDNAKPADKDAAK 294
Query: 281 EIALKAYLSAQNTPTKIEKHEAEY 304
+ A + + +P + +Y
Sbjct: 295 KRAEEVLAEVRKSPGSFAELAKKY 318
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 92/286 (32%), Gaps = 62/286 (21%)
Query: 53 DGDISKRIALLKLQKINGELEKIA------VQELIVETLKKQEIEK---------SGITF 97
D R L+ LQ+I + A V LI +++E++ + +T
Sbjct: 152 QFDARLRSELV-LQQIPQSIVSSAFVPKSLVDRLIEARDQQREVQALLFKPADYAAKVTV 210
Query: 98 DSNTVNYFFV----QHARNTGLSAEDFS----SFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
D + ++ + A + AE + + + K+Y
Sbjct: 211 DDKAIQAYYDAHQQEFAVLEQVKAEYVVFSGEEMMKQIPVTPEQLKEYY----------- 259
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEES 208
++ + T + +L +PDN K ++ +KR ++
Sbjct: 260 ----------------DQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAE 303
Query: 209 RLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQ 264
+ P +L K S + G+ +L + P F+N L K + ++ +
Sbjct: 304 VRKSPGSFAELAKKYSGDPGSAAQGGELGFLAKGATVPPFENALFALKQPGDISDVVESD 363
Query: 265 KGVEYIAICDKRDLGGEIA------LKAYLSAQNTPTKIEKHEAEY 304
G I + D + G + L+ + Q K + +
Sbjct: 364 FGFHIIKLEDVKGGGVQSLDAVKPELEREVRTQLANKKYTELADAF 409
>gi|110801593|ref|YP_697584.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Clostridium perfringens SM101]
gi|110682094|gb|ABG85464.1| PPIC-type PPIASE domain protein [Clostridium perfringens SM101]
Length = 248
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 92/280 (32%), Gaps = 44/280 (15%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M ++ T+ IT I + IA Q+ ++++ + +
Sbjct: 1 MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIAF---------- 50
Query: 98 DSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ A+ TGL E+F L+K F + L Q + + + +
Sbjct: 51 ------ELMSEFAKETGLDKTEEFKDQLNK-------FAKELLAQMVMKKTLSS---VTV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E + + K + + + +L ++ +K ++ +
Sbjct: 95 TDDEAKDFYEEHKENFVELETVTAKHILV-------ASEEDAKKVEEEIASGSITFE--- 144
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ K++S G + + P+F+ + P TQ G I + DK
Sbjct: 145 DAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKVEDK 204
Query: 276 RDLGGEIALKAYLSAQNTPTKIEK-HEAEYV---KKLRSN 311
+ + + Q I++ + +Y+ K+LR
Sbjct: 205 TE--AKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREK 242
>gi|119945205|ref|YP_942885.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas
ingrahamii 37]
gi|119863809|gb|ABM03286.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychromonas
ingrahamii 37]
Length = 631
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 19/181 (10%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLK---------- 64
V+I+ + VS + T+N E I+ + + R L +
Sbjct: 19 VVIILSFALAGVSSYLGGSGISVAVTVNDEEISKATVDQAYQNERTRLEQQYGEQFALLA 78
Query: 65 -LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDF 120
N ++ + A+Q +I E L Q I+ G+ V + + + E +
Sbjct: 79 STPNFNQKIRQQAMQTVISERLLTQAIKDMGLRIGDEQVKQEIRKMKEFQVDGNFNNEQY 138
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
S L + F Q + ++ ++ AN+ + + R +
Sbjct: 139 LSLLRRASYTPAQFSQSIKQDLARRQLLTMVLGSEFILPMEVQQANRLQAQKRVARVLTV 198
Query: 181 R 181
+
Sbjct: 199 K 199
>gi|333010902|gb|EGK30328.1| PPIC-type PPIASE domain protein [Shigella flexneri K-272]
gi|333020704|gb|EGK39964.1| PPIC-type PPIASE domain protein [Shigella flexneri K-227]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/333 (13%), Positives = 92/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATSAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPA--NKQ 168
G+ F LA VV+ N K E EI + +
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPATEQEIASYYEQN 221
Query: 169 KMKNITVREYLIRTVLFSI------------------------PDNKLQNQGFVQKRIKD 204
K +T ++ + + + + K +
Sbjct: 222 KNNFMTSEQFRVSYIKLVAAMMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|300703976|ref|YP_003745578.1| peptidyl-prolyl cis-trans isomerase (rotamase d) [Ralstonia
solanacearum CFBP2957]
gi|299071639|emb|CBJ42963.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Ralstonia
solanacearum CFBP2957]
Length = 649
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/400 (12%), Positives = 105/400 (26%), Gaps = 106/400 (26%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKL 65
+ L+ V F + Y + S + VIT ++ R+ L ++
Sbjct: 10 RLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDAVITTSELDARVREQTERLRQM 69
Query: 66 QKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-- 115
+ + + +I + + E ++ ++ + V Q L
Sbjct: 70 LGGQYDPRQFEGPQMRRDVLDGIIQQRVMANEASRTNLSIADSKVRETIEQIPAVAQLRK 129
Query: 116 -----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLK--------YGN 158
+ + L QG+ F + + + +V + F+ K +
Sbjct: 130 PDGKFDTDAYIKLLAAQGMTPEQFDARVRSELVLQQIPQSIVASAFVPKSLVDRLIDARD 189
Query: 159 LEMEIPANKQKMKNITVRE----------YLIRTVLFSIPDNKLQN-------------- 194
+ E+ A K + + Y F++P+
Sbjct: 190 QQREVQALLLKPADYVSKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIP 249
Query: 195 -------------------------------------QGFVQKRIKDAEESRLRLPKDCN 217
K AEE + K
Sbjct: 250 VTPEQLKEYYDQNVARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKAPG 309
Query: 218 KLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
+ A K G+ +L + PQF++ L K + ++ + G I
Sbjct: 310 NFAELAKKYSGDPGSAAQGGELGFLAKGATVPQFESALFALKQPGDISDVVQSDFGFHII 369
Query: 271 AICDKRDLGGEIA------LKAYLSAQNTPTKIEKHEAEY 304
+ + + G + L+ + Q K + +
Sbjct: 370 KLEEVKGGGVQSLEAVKPELEREVRTQLANKKYTELADAF 409
>gi|288800858|ref|ZP_06406315.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral
taxon 299 str. F0039]
gi|288332319|gb|EFC70800.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral
taxon 299 str. F0039]
Length = 463
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 100/307 (32%), Gaps = 38/307 (12%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKK 87
VS ++ + + E I D+ + + L+ K+NG+ + I ++L V+ L
Sbjct: 29 TVSVNPQSVIDEVIWVVGDEPILKSDVEAMRLQSELEGVKLNGDPDCIIPEQLAVQKLFL 88
Query: 88 QEIE--------KSGITFDSNTVNYFFVQHARNTGL------SAEDFSSFLDKQGIGDNH 133
+ + + +NY+ Q L S + +
Sbjct: 89 HQAAIDSINISESEISSEIEHQINYWIQQIGSKEKLEEYRRQSITQIRQQMH------DD 142
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEM--EIPANKQKMKNITVREYLIRTVLFSIPDNK 191
FK L IQ + +VK D + G++ E T E ++ +P
Sbjct: 143 FKNRLLIQEMKKKLVK-DIAVTPGDVRRYFESLPADSIPTIPTAVEV---EIITMLPRVS 198
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL 249
+ V+ +++ E + L + S+ + G+ Y P F +
Sbjct: 199 QEEIAKVKNELREYTERVTKGETSFATLARLYSEDPGSARQGGEMDYTGRGMFDPAFAAV 258
Query: 250 L--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA----E 303
+ T+ G I + DKR G ++ ++ L +I +
Sbjct: 259 AFNLTDPKKISKIVETEFGYHIIQLIDKR--GDKVKVRHILRKPVVSAEIVEATKVKMDS 316
Query: 304 YVKKLRS 310
+ LR
Sbjct: 317 LLADLRD 323
>gi|256556956|gb|ACU83578.1| parvulin-like peptidyl-prolyl isomerase [uncultured bacterium
HF130_AEPn_2]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 92/275 (33%), Gaps = 31/275 (11%)
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA---------- 110
++ + G Q L E L Q ++GI + + A
Sbjct: 135 RFDQVIRQLGYSRMQFRQMLTQEMLIGQL--RAGIAGSGFVTDQEVLNFARLEKQTRDFA 192
Query: 111 --------RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
L+ ++ ++ D+ + I + ++ K F + + E
Sbjct: 193 TVSVKADPAAVKLTDDEVKAYYDQHAKEFMT-PDQVVIDYL--ELKKASFFDQVTVNDDE 249
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ A +K + +L + N + + +I + ++RL + L K
Sbjct: 250 LQALYEKETANLAEQRRAAHILIEV--NDKVTEAQAKAKIDEV-QARLAKGESFEALAKE 306
Query: 223 ASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKR--D 277
S+ + G + P+F++ L +Q+ + P + G I + +
Sbjct: 307 FSQDPGSANNGGDLGFAGPGVYDPEFESALYGLNQDQVSAPVRSSFGWHLIKLLGVEAPE 366
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +LK L+ + ++E+ E K+L A
Sbjct: 367 VPSFASLKDKLTRELKTQQVEQRFVEATKQLEDAA 401
>gi|258405892|ref|YP_003198634.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfohalobium
retbaense DSM 5692]
gi|257798119|gb|ACV69056.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfohalobium
retbaense DSM 5692]
Length = 626
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 79/269 (29%), Gaps = 22/269 (8%)
Query: 60 IALLKLQKINGELEKIAVQELIVETL--KKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+L + N +L L K Q K + F +
Sbjct: 132 SRYEQLLRANQLTPAQFEADLTRSLLTNKIQRAVKLPASVSEAQAKDLFAFSQEKARMEY 191
Query: 118 EDFSSFLDKQGIGDN-------------HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
F+ D+ G+ N F++ ++ + + + EI
Sbjct: 192 ALFAWQ-DQPGLAPNEEAVKHYYQENQKQFQRPARMEMDYLLLTPEGLAAAQPVSDEEIK 250
Query: 165 A--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK- 221
A + E R +L +P+ Q + A RLR D +L +
Sbjct: 251 AYYEANPGEFERQEELKARHILIEVPEGADDQQVTEAREQAQALVERLRDGADLAELARE 310
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
++ G + ++ F+ ++P T G I + D++ G
Sbjct: 311 YSDGPSSAQGGDLGWFARGEMVEAFEAAAFALDTGEISDPVRTSFGFHVITVEDRKPSGT 370
Query: 281 E--IALKAYLSAQNTPTKIEKHEAEYVKK 307
+ ++ + + K + ++ + +
Sbjct: 371 QPFEEVQDEIRQEIGADKAAQKMSDLLDE 399
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 17/177 (9%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKINGE------- 71
F LII V + + + GE I D + ++ +
Sbjct: 18 FALIILVFVFWGVGNLGNDQATVVAEVQGEAILIRDFQQAYQRTVENLRRKQPDISREDF 77
Query: 72 ----LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNTGLSAEDFSSF 123
L++ + +LI L +E +K G+ + V + Q + +
Sbjct: 78 EQMQLKRQVLNDLITSQLLFREAKKLGLAVTAPEVRQYVQQMPVFQNADKQFDPSRYEQL 137
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L + F+ L + + + L E + + EY +
Sbjct: 138 LRANQLTPAQFEADLTRSLLTNKIQRA-VKLPASVSEAQAKDLFAFSQEKARMEYAL 193
>gi|288817631|ref|YP_003431978.1| hypothetical protein HTH_0310 [Hydrogenobacter thermophilus TK-6]
gi|288787030|dbj|BAI68777.1| hypothetical protein HTH_0310 [Hydrogenobacter thermophilus TK-6]
gi|308751229|gb|ADO44712.1| Formiminotransferase domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 444
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 60/329 (18%), Positives = 110/329 (33%), Gaps = 32/329 (9%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---RIALL 63
T L + + + F L +F + S + +NG IT D + R + +
Sbjct: 10 TLLVFIVTVASGAFFLWLFFTGSVRDITSVG--KKCVAEVNGSCITLRDYRRELLRFSNI 67
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDF 120
+ + + ++K ++ LI + L Q+ G V SA +
Sbjct: 68 QSRDLEEVIKKQVIENLITQELLYQKARSLGFYASDEEVVSVIKSDPTFQEGGVFSASKY 127
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYL 179
L + G+ ++ Y+ ++ E E N ++ + Y+
Sbjct: 128 KEMLARLGLEPGEYEDYIRRMLTVQKLL-ALVSNSVYLSEAEKNINLAVQSTLLSGKLYI 186
Query: 180 IRTVLFSIPDNKLQNQ--GFVQK-----RIKDAEESRLRLPKDCNKLEKFASKIHDV--S 230
I + Q + F +K R + + R+ KD K+E+ I +
Sbjct: 187 ITPSDVEVSYTPTQEEMMSFYEKNKELFRRPEKKLVRVWAEKDKAKVEEIYRAIKEGKQV 246
Query: 231 IGKAQYLLESD---LHPQFQNL---LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G +YLL D L + L + VT++G EY+ + R I
Sbjct: 247 QGYTEYLLPDDANRLPKGVSSEVSKLDQKDGIL----VTKEGDEYLIVYLYRVEPAGIRS 302
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ Q I+K +A LR A
Sbjct: 303 FEEVKEQIRSALIDKRKASL---LRDKAQ 328
>gi|237736222|ref|ZP_04566703.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium mortiferum ATCC
9817]
gi|229421775|gb|EEO36822.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium mortiferum ATCC
9817]
Length = 575
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 10/174 (5%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--------IALL 63
FI +T F+ + + S++ ++ ++G+ I+ D+ K L
Sbjct: 13 FIWFITILFIASSAMLAYMNMKSSYSRANVYAFKLDGDKISKIDVEKTKANLTQGYSRYL 72
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ +E IA ++I L + E+ + ++ VN + + G + E F
Sbjct: 73 GDKLDKDLIEVIAFDDIINRNLTLKIAEELNLKVPNSEVNAQYEAIENSVG-NKEQFKRM 131
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
L QG FK + + + E EI N + KN E
Sbjct: 132 LAVQGYTKKTFKNEIKNNMLIEKTFQ-KIQEGIVPTEEEIMNNYNENKNTLYSE 184
>gi|70731342|ref|YP_261083.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas fluorescens
Pf-5]
gi|68345641|gb|AAY93247.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas fluorescens
Pf-5]
Length = 623
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + + + ++ +NGE IT ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVALLALTGFDAIFKATTHNQDAAKVNGEEITQNELSQAV 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + Q + L + A++ LI L Q + S F ++ +
Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLREAALKGLIDRKLLLQGAQDSKFAFSEGALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + S E F + + G F+Q L + + V+ + ++
Sbjct: 121 QTPEFQVDGKFSPERFDQVIRQLGYTRLQFRQMLTQEMLIGQ-VRAGLAGSGFVTDAQVL 179
Query: 165 ANKQKMKNI 173
A + K
Sbjct: 180 AFARLEKQT 188
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 73/210 (34%), Gaps = 29/210 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + V ++ QHA+ ++ + Y+ ++ K F
Sbjct: 203 VKLTDDEVKAYYDQHAKEF-MTPDQVVI-------------DYI-------ELKKAAFFD 241
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + ++ A QK + +L + N N+ + +I++ ++RL +
Sbjct: 242 QVSVKDEDLQALYQKEIANLSEQRRAAHILIEV--NDKVNEAQAKAKIEEI-QARLAKGE 298
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
L K S+ + G + P F+ L +++ + P T G I
Sbjct: 299 SFEALAKEFSQDPGSASNGGDLGFAGPGVYDPTFEKALYALNKDQVSAPVRTGFGFHLIK 358
Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEK 299
+ ++ +LK L+ ++E+
Sbjct: 359 LLGVEAPEVPSFASLKGKLTRDLKTQQVEQ 388
>gi|260853664|ref|YP_003227555.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str.
11368]
gi|257752313|dbj|BAI23815.1| peptidyl-prolyl cis-trans isomerase [Escherichia coli O26:H11 str.
11368]
gi|323153478|gb|EFZ39732.1| PPIC-type PPIASE domain protein [Escherichia coli EPECa14]
Length = 623
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKVVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|256545093|ref|ZP_05472459.1| PPIC-type PPIASE domain protein [Anaerococcus vaginalis ATCC 51170]
gi|256399134|gb|EEU12745.1| PPIC-type PPIASE domain protein [Anaerococcus vaginalis ATCC 51170]
Length = 248
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 87/274 (31%), Gaps = 51/274 (18%)
Query: 42 IRTTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG+ I+ ++ ++ + ++Q L + ++ E L QE+ + D
Sbjct: 8 ILAEVNGKKISQKEV---VSFITQMQGGQQFLNPQGIHQITDE-LVNQEL----MYID-- 57
Query: 101 TVNYFFVQHARNTGLSA-EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
A L E+F+ L+ +N K Y +
Sbjct: 58 ---------ALENKLDEDEEFTKELEIT--KENMLKNYAMHKL----------FESIEVS 96
Query: 160 EMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ EI K + + Y +L ++ + + + +
Sbjct: 97 DEEIKNYYDNNKEVVKKPKSYRASHILV-------DDEESAKNILNEIND-----GLSFE 144
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
SK + G + + +F+ L K + + P TQ G I +
Sbjct: 145 DAANKYSKDNGSKNGDLGEFPKGTMVKEFEEALDKLGEGEISKPVKTQFGYHIIKLDHTH 204
Query: 277 DLGGEIALKAYLSAQNTPTKIE-KHEAEYVKKLR 309
D + + + T + K + +Y++K R
Sbjct: 205 DEY--LPEFDEIKDRIHDTLLMIKRQEKYLEKTR 236
>gi|315657935|ref|ZP_07910809.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus lugdunensis
M23590]
gi|315496971|gb|EFU85292.1| peptidyl-prolyl cis-trans isomerase [Staphylococcus lugdunensis
M23590]
Length = 322
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 25/218 (11%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K D+ ++ Q + G + F S L +QG+ + +KQ +
Sbjct: 71 KYKDKVDTKDIDDEIKQEQKKYGGK-DQFESTLKQQGMSLDDYKQQ-------KKLAAYQ 122
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRL 210
L +++ K K + +L + +G K+ K+ AEE +
Sbjct: 123 KQLLADKIKVSDKDVKDNSKKAS-------HILIKVKSKDSDKEGLSDKKAKEKAEEIQK 175
Query: 211 RLPKDCNKLEKFAS-----KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
++ KD +K + A G Y+++ + +F+ L + + T
Sbjct: 176 QVEKDPSKFGEIAKKESMDSSSAKKDGSLGYVIKGQIVDEFEKALFDLKEGKVSKVIKTD 235
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
G I + D E KA + + K++K+
Sbjct: 236 YGYHIIKADKESDFNSE---KANIKEKMIEQKVQKNPK 270
>gi|312112916|ref|YP_004010512.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodomicrobium
vannielii ATCC 17100]
gi|311218045|gb|ADP69413.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodomicrobium
vannielii ATCC 17100]
Length = 283
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 98/298 (32%), Gaps = 47/298 (15%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAV-Q 78
I ++++ + + +NG IT+ +I+ A + ++ + E + + +
Sbjct: 3 ARILLSAAVLAFGAQMAQAAPVARVNGTDITEAEIAFAEAEVGAEIAGLPAESRRRVLVE 62
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L+ L E K + + F + A L L + F +
Sbjct: 63 YLVEAHLFASEAAKDKLDAAKD-----FEERAAYYKL------RALR------DTFYEK- 104
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + + ++Q K E R +L + V
Sbjct: 105 ------------KVRDAITDAQAKAAYDEQIAKLKPEPEVRARHILVKTKEEA---ADLV 149
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNT 257
++ A+ + L +K A + G Y + + F++
Sbjct: 150 KQLKGGADFNEL--------AKKSADGPSANTGGDLGYFSKGQMVKVFEDTAFALQPGQI 201
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++P ++ G I + DKR+ + + Q + ++ E V+KLRS+A +
Sbjct: 202 SDPVQSEFGWHVIKVEDKRNRP--VPSFDEVKDQIVASLVQNQLRETVQKLRSSAKVE 257
>gi|325285384|ref|YP_004261174.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga lytica
DSM 7489]
gi|324320838|gb|ADY28303.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga lytica
DSM 7489]
Length = 475
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 104/286 (36%), Gaps = 18/286 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITF 97
+ + VI D DI K + L+ Q ++ + + + +L+ + L + + +
Sbjct: 52 DGVSAVVGDYVILDSDIEKTLIDLRSQGVSEDDITKCGLLGKLMEDRLYAHQAVQDSLLV 111
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLD------KQGIGDNHFKQYLAIQSIWPDVVKND 151
+ VN + ++ L ++ + ++ FK + + + ++
Sbjct: 112 SDDEVNATSERQIQSLVGQIGSMDKLLKYYKKDSQEALREDLFK--INKLRMLSEKMQQK 169
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ + E+ +K+ + + + I ++ QK I + R
Sbjct: 170 IIEEIEITPEEVRQFYKKIPKEERPVFGAQLEIAQIVKQPEASEEEKQKVIDKLNKIRED 229
Query: 212 L--PKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQK 265
+ K++ S + S G + E++ +F+++ + + P+ TQ
Sbjct: 230 VLVGGSSFKIKAIISSEDEGSRSNGGFYKIKKETNFVKEFKDVAFSLKEGEVSEPFETQF 289
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + + + ++ + + ++E+ E ++K+R
Sbjct: 290 GFHIIYLEKIKGQERD-VRHILMAPKISDERLEEARLE-LEKIRQR 333
>gi|161619861|ref|YP_001593748.1| chaperone surA precursor [Brucella canis ATCC 23365]
gi|254704953|ref|ZP_05166781.1| chaperone surA precursor [Brucella suis bv. 3 str. 686]
gi|260567571|ref|ZP_05838041.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4
str. 40]
gi|261755654|ref|ZP_05999363.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 3
str. 686]
gi|161336672|gb|ABX62977.1| Chaperone surA precursor [Brucella canis ATCC 23365]
gi|260157089|gb|EEW92169.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4
str. 40]
gi|261745407|gb|EEY33333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 3
str. 686]
Length = 331
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 90/282 (31%), Gaps = 48/282 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + ++ K + ++
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEEAEAIIKKLEGGAKSEDLAKASSTDGT 210
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICD 274
S G Y E + P+F+ T P TQ G I + D
Sbjct: 211 AS-----------SGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLED 259
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + Q + + E VKKLR I Y
Sbjct: 260 RRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|89052781|ref|YP_508232.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Jannaschia sp. CCS1]
gi|88862330|gb|ABD53207.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Jannaschia sp. CCS1]
Length = 301
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 91/277 (32%), Gaps = 44/277 (15%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ + T+NG IT + IA+ ++ E +++ + L L++ ++
Sbjct: 48 AETVMATVNGHDIT---VGHLIAMRQML--PAEYQQLPDEVLFEGMLEQLIQQQVLADVA 102
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V N +++ + + +A+ + + ++ + YG
Sbjct: 103 EANVTREMELLLEN------------EQRALMAATYMDDIAMAELGEEELQAAYDEAYGE 150
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+E EY +L + + Q + + A+ + L
Sbjct: 151 VEP-------------TVEYNAAHILV---EGEEDAQNLLTALGEGADFAEL-------- 186
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + G + E + P+F +++ ++P TQ G + + + R+
Sbjct: 187 AAENSIGPSGPNGGALGWFTEGMMVPEFEAAVMELEPGEVSSPVQTQFGWHVVLLNETRE 246
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ T + +++L + A I
Sbjct: 247 QAAPTLDDVRPELEETIRRGRVDAR--LEELMAEAEI 281
>gi|306842909|ref|ZP_07475545.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO2]
gi|306286932|gb|EFM58452.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO2]
Length = 331
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|291483469|dbj|BAI84544.1| molecular chaperone [Bacillus subtilis subsp. natto BEST195]
Length = 294
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 96/306 (31%), Gaps = 45/306 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I + + + + +T G++ + K L ++
Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNM---KKTAGASVLTQL 57
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K ++ ++ G + +++ + G K
Sbjct: 58 VQEKVLDKKYK----------VSDKEIDNKLKEYKTQLG---DQYTALEKQYG------K 98
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
YL Q + + + + EI + +K + +L + D K +
Sbjct: 99 DYLKEQVKYELLTQKAAKDNIKVTDDEIKEYWEGLKG----QIRASHIL--VADKKTAEE 152
Query: 196 GFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNL-LK 251
+ + + + D + G+ ++ + L F+ K
Sbjct: 153 IEKKLKKGEKFDALAKEYSTDTGSA---------TNGGELGWISKDNEQLDSTFRKAAFK 203
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLR 309
N ++P TQ G I ++R + +K L ++ K+ A E V+K+
Sbjct: 204 LKTNEVSDPVKTQFGYHIIKKTEERGKYDD--MKKELKSEVLEQKLNDSNAVQEAVQKVM 261
Query: 310 SNAIIH 315
A I
Sbjct: 262 KKADIE 267
>gi|288803875|ref|ZP_06409300.1| putative PPIC-type PPIASE domain protein [Prevotella melaninogenica
D18]
gi|288333640|gb|EFC72090.1| putative PPIC-type PPIASE domain protein [Prevotella melaninogenica
D18]
Length = 488
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 98/304 (32%), Gaps = 55/304 (18%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+K +T F +I+ ++ + ++ + TING+ ++ + G
Sbjct: 9 CVKRITMKFKVILSALLLSTTM-AYGQTDPTIMTINGQPVSRSEFEYSYN---KNNAEGV 64
Query: 72 LEKIAVQE----LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-FLDK 126
++K +V E I LK Q + + + F FL
Sbjct: 65 IDKKSVDEYVDLFINYKLKVQAALDAHLD-------------------TLSSFKKEFLSY 105
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ Q + I V+ + Y + ++ AN + +L
Sbjct: 106 RN-------QQVRPTFITDADVEAEGHKLYREAQQQVEANGGM--------WNCAHILIG 150
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHP 244
+ N + K++ D+ + LR D +L K S + + G+ +L + P
Sbjct: 151 LYQNADKEAAEAAKQLADSLYNALRGGADFAELAKKYSTDVNSAMNGGQLLHLQKGQTVP 210
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL---------SAQNTP 294
+F+ L + P ++ G I + + L+ + Q
Sbjct: 211 EFEKALFALKPGEISAPVLSPFGYHIIKMGGRESFPTYETLRPEIMQYIEMQGLREQIID 270
Query: 295 TKIE 298
K++
Sbjct: 271 QKLD 274
>gi|302344093|ref|YP_003808622.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus
baarsii DSM 2075]
gi|301640706|gb|ADK86028.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus
baarsii DSM 2075]
Length = 649
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/175 (9%), Positives = 51/175 (29%), Gaps = 16/175 (9%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---------- 70
++ + + ++ + + +N + I + +S+ + Q
Sbjct: 20 LIALAFALSFGLSPNFGSNPGVAMKVNDQPIMEDAVSELYGRMTEQARQQFGDNFDKLAP 79
Query: 71 --ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLD 125
L + A+ L+ L Q ++ G+ + + A + L
Sbjct: 80 MLNLRQQALYSLMDRLLLAQAAQRMGLGVSNRELASSIQDMAAFQVEGKFDMRLYQQRLA 139
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ + F+ + + + +++ Q+ + YL+
Sbjct: 140 ANRLTEERFENSVRADLLQGK-IAAMVGGSGQVTPLQVDQALQEALSRADAVYLL 193
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 28/266 (10%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT--FDSNTVNYFFVQHARNTG 114
+R+A +L + E A + L+ + G + V+ +
Sbjct: 135 QQRLAANRLTEERFENSVRA------DLLQGKIAAMVGGSGQVTPLQVDQALQEALSRAD 188
Query: 115 -----LSAEDFSSFLD-KQGIGDNHFKQY---------LAIQSIWPDVVKNDFMLKYGNL 159
+ ED + + H++ + L + + V
Sbjct: 189 AVYLLVKPEDLLDSVKVGEDEIAEHYESHKGLYMNPATLRVDYVALPVSAFRDKADVAED 248
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK- 218
E+ + E R +L + + Q K A + R +D K
Sbjct: 249 EIIDAYEMDWRQYSRPEEVRARHILIELAPEADEAQKAKAKAQALALLEKARAGEDFAKM 308
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRD 277
++++ G Y + F L+ K + T+ G + + DK+
Sbjct: 309 AKEYSKGPSADKGGDLGYFQRGQMVGPFDELVFKMTPGQI-EVVETEFGWHVVKLEDKK- 366
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAE 303
I + E+ +
Sbjct: 367 -KARIVPLEEARGEIKARLAEQQAKD 391
>gi|152986261|ref|YP_001348850.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PA7]
gi|150961419|gb|ABR83444.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas aeruginosa PA7]
Length = 621
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 8/181 (4%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + ++ + ++ K+ F + + ++ A QK + +L + N +
Sbjct: 225 EQVVVEYV--ELKKSSFFDQVKVKQEDLDALYQKEIANLSEQRDAAHILIEV--NDKTSD 280
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNLL-KKS 253
+ +I + + + ++F+ I + G Y P F+ L
Sbjct: 281 EQARAKIDEIKARLAKGEDFAALAKEFSQDIGSAATGGDLGYAGRGVYDPAFEEALYALK 340
Query: 254 QNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
Q + P T G I + + ++ +LK L + +E+ E K L S+
Sbjct: 341 QGEVSAPVKTPYGYHLIKLLGVQAPEVPSLESLKPKLEDELKKQMVEQRFVEATKDLESS 400
Query: 312 A 312
A
Sbjct: 401 A 401
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++++ + + S + +NG+ I+ ++ + +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIIVLLSLTGFDAIIRATDHSNVAAKVNGDDISLNEVQQAV 60
Query: 61 ALLK---LQKINGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ + LQ++ + L++ A++ LI TL Q + F ++ +
Sbjct: 61 DMQRRQLLQRLGKDFDPSMLDDKLLKEAALKGLIERTLLLQAAKDDKFAFSDQALDQLIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
Q + +A+ F + + F+Q L + + + + + E+
Sbjct: 121 QTPEFQVDGKFNADRFDQVIRQMNYSRLQFRQMLGQEMLIGQL-RAGLAGTGFVTDNELQ 179
Query: 165 ANKQKMKNI 173
+ + +
Sbjct: 180 SFARLERQT 188
>gi|330011537|ref|ZP_08307123.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. MS 92-3]
gi|328534154|gb|EGF60789.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. MS 92-3]
Length = 639
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 91/280 (32%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDISKRIAL--LKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I G +A ++Q+ G+ + + + LI E+L
Sbjct: 57 AAKVNGQEIGRGQFENAVASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLL 116
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + G++ V Q N + FS + + G+ + + Q L Q
Sbjct: 117 DQYARELGLSISDEQVKQAIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLT 176
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + +P ++ + ++ ++R ++ + ++
Sbjct: 177 TQQLINA-----IAGTDFMLPGESDQLAALVSQQRVVREATINVNALAAKQTASDEEINV 231
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++++ R + A + ES + Q+ + ++ T P +
Sbjct: 232 FWQQNQARFMAPEQFRVSYIKM-------DAASMQESASDDEIQSWYDQHKDQFTQPQRS 284
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ V I K + + L + T ++ +
Sbjct: 285 RYSV----IQTKTEADAKAVLAELQKGADFATLAKEKSTD 320
>gi|289550444|ref|YP_003471348.1| Foldase protein PrsA precursor [Staphylococcus lugdunensis
HKU09-01]
gi|289179976|gb|ADC87221.1| Foldase protein PrsA precursor [Staphylococcus lugdunensis
HKU09-01]
Length = 322
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 76/218 (34%), Gaps = 25/218 (11%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K D+ ++ Q + G + F S L +QG+ + +KQ +
Sbjct: 71 KYKDKVDTKDIDDEIKQEQKKYGGK-DQFESTLKQQGMSLDDYKQQ-------KKLAAYQ 122
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRL 210
L +++ K K + +L + +G K+ K+ AEE +
Sbjct: 123 KQLLADKIKVSDKDVKDNSKKAS-------HILIKVKSKDSDKEGLSDKKAKEKAEEIQK 175
Query: 211 RLPKDCNKLEKFAS-----KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
++ KD +K + A G Y+++ + +F+ L + + T
Sbjct: 176 QVEKDPSKFGEIAKKESMDSSSAKKDGSLGYVIKGQMVDEFEKALFDLKEGKVSKVIKTD 235
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
G I + D E KA + + K++K+
Sbjct: 236 YGYHIIKADKESDFNSE---KANIKEKMIEQKVQKNPK 270
>gi|114327287|ref|YP_744444.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
gi|114315461|gb|ABI61521.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
Length = 346
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 81/284 (28%), Gaps = 50/284 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGIT 96
S + +NG I GD+ L Q + I + +++ Q K G+
Sbjct: 86 STVVGRVNGADIHLGDLEDAARNLPEQMRQAPPQVIYPILLNQMLQREALVQAARKEGLD 145
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ A + +A D ++
Sbjct: 146 KKPD--------VAADMKRAANQTLQ----------------------NDYIREHVGPLL 175
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ + +K+ E R +L + ++ I + L+ D
Sbjct: 176 TDEALRKKFDKELAGKPGEEEVHARHILVPT-------EDEAKRIIAE-----LKAGGDF 223
Query: 217 NK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAIC 273
K ++ + + G + ++D+ P+F + N + P TQ G I
Sbjct: 224 AKIAKERSKDPGAANGGDLGFFKQADMVPEFSKAAFALKNNEVSPTPVHTQFGWHVIQTL 283
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ R + +A Q I+ + V A + +
Sbjct: 284 EHRRAPAQTFEQA--RDQLRQQVIQDGVKDLVTNAMKGAKVERF 325
>gi|88703271|ref|ZP_01100987.1| peptidyl-prolyl cis-trans isomerase D [Congregibacter litoralis
KT71]
gi|88701985|gb|EAQ99088.1| peptidyl-prolyl cis-trans isomerase D [Congregibacter litoralis
KT71]
Length = 622
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 17/171 (9%)
Query: 43 RTTINGEVITDGDISKRI-----ALLKLQKINGE--------LEKIAVQELIVETLKKQE 89
+NGE IT + + + LL + N + L + A++ LI + KQ
Sbjct: 42 VAEVNGEEITPFALQQEVSVQQRRLLSILGENADPALLDQAQLSQQALETLIQREIIKQA 101
Query: 90 IEKSGITFDS---NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+T + Q + S + F S L G F++ L+
Sbjct: 102 AADLELTTSDQALADIIGSMGQFQIDGQFSPDMFQSALASAGFTPALFRERLSEDVEIGQ 161
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + E+ Y+ ++ + ++ ++
Sbjct: 162 L-RAGIAGSDFTTAAELELASAIALEGRDVRYVSLPLIDFMASVEVSDEAV 211
>gi|324114668|gb|EGC08636.1| ppic-type ppiase domain-containing protein [Escherichia fergusonii
B253]
Length = 622
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/325 (12%), Positives = 96/325 (29%), Gaps = 82/325 (25%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I+ G ++Q+ G+ L + + LI E L
Sbjct: 41 AAKVNGQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 100
Query: 87 KQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + V F A + +++ L++ G+ + + Q L Q
Sbjct: 101 DQYSRDLKLGISDEQVKQAIFATPAFQVDGKFDNSRYNAILNQMGMSADQYAQALRNQLT 160
Query: 144 WPDVVKN---------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
++ +++ +++ A KQ++ + + Y +
Sbjct: 161 TQQLINGIAGTDFMLKGETDELAALVSQQRVVREATIDVNAKAEKQQVSDAEITSYYDQH 220
Query: 183 V-LFSIPDN-----KLQNQGFVQKRIKDAEE--------------SRLRLPKDCNKLEKF 222
F P+ + + +Q+ + DA+ R+R K E
Sbjct: 221 KNNFVTPEQFRVSYIMLDAANIQQPVSDADIQAYYDQHQDQFTQPQRVRYSIIQTKTENE 280
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L +S + ++ K + +
Sbjct: 281 AKAVLDALNNGGDFAELAKEKSADIISARNGGDLGWLEDSTTPQELKDAGLKDKGQLSGV 340
Query: 261 YVTQKGVEYIAICDKRDLGGEIALK 285
+ G + + D + + +
Sbjct: 341 IKSSVGFLVVRLDDVQPAKVKTLAE 365
>gi|269102133|ref|ZP_06154830.1| peptidyl-prolyl cis-trans isomerase PpiD [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268162031|gb|EEZ40527.1| peptidyl-prolyl cis-trans isomerase PpiD [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 565
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGI 129
+ ++ +I + L ++ + G+ + + + + E ++ L + GI
Sbjct: 23 RRSVLERMINDVLIQKRAHELGLRVSDQQIRDAIFAMPEFKVDGKFNNEQYNQLLRRSGI 82
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
F + L D+++ F+ + + +++ + +E +IRT+ ++ D
Sbjct: 83 TPEQFAESLR-----TDLLRQQFLGAIEGSDFALSGEVNELRMLESQERVIRTLTLNLAD 137
Query: 190 NKLQNQGFVQKRIKDA 205
+ + + + + A
Sbjct: 138 FTKKAEASITEEQEKA 153
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 81/259 (31%), Gaps = 36/259 (13%)
Query: 64 KLQKINGELEKIAVQELIVETLKKQ--------------EIEKSGITFDSNTVNYFFV-Q 108
+L + +G + + L + L++Q E+ + + V
Sbjct: 75 QLLRRSGITPEQFAESLRTDLLRQQFLGAIEGSDFALSGEVNELRMLESQERVIRTLTLN 134
Query: 109 HA-----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A ++ E +F ++ F + ++ + ++ + + +
Sbjct: 135 LADFTKKAEASITEEQEKAFYEQ---NPQQFTRPAQVKVSYVEITGDKLKDSIEVSDAQA 191
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
N+ K K T + + +L + K +A ++L+ + +L K
Sbjct: 192 YYNEHKDKFSTPEKRQVSHILIT-------GDSAASKEKAEAILAQLKDGANFAELAKKD 244
Query: 224 S--KIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
S K GK ++ + + P F++ + + + G I +
Sbjct: 245 SDDKFSAKDGGKLEWFEKGVMDPAFEDAAFALAKPGDLSGVVKSSFGYHIILLDGIEPAK 304
Query: 280 GEIAL--KAYLSAQNTPTK 296
+ KA + A K
Sbjct: 305 AKPFADVKAEIIADIKSQK 323
>gi|83859697|ref|ZP_00953217.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis
alexandrii HTCC2633]
gi|83852056|gb|EAP89910.1| peptidyl-prolyl cis-trans isomerase family protein [Oceanicaulis
alexandrii HTCC2633]
Length = 330
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 73/247 (29%), Gaps = 51/247 (20%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELE------KIAVQELIVETLKKQEIEK 92
S+I + +IT D+ + L L + L + + +LI + L E
Sbjct: 54 QSQIAARVGETIITVDDVRREAVSLGLTETPQALMPSDQVFRDTLSDLIDQRLLALEAVA 113
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+ D L+A + + + +V+N
Sbjct: 114 RDVQDDEE----------ARLRLAAAE----------------ERILGNI----LVENAI 143
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ +E+ +Q E R +L + + + +
Sbjct: 144 ASAVTDEAVELVYEEQSRLAPRTEEIRARHILVETREEADEVARLLAE------------ 191
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
D +L S+ S G Y + + P F + + + P+ T+ G
Sbjct: 192 GSDFGQLAAQVSRDLATRFSGGDLGYFTRTGILPGFAQVAFATDEGAVSAPFETEYGWHV 251
Query: 270 IAICDKR 276
+ + D+R
Sbjct: 252 LQVMDRR 258
>gi|306843392|ref|ZP_07475993.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO1]
gi|306276083|gb|EFM57783.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. BO1]
Length = 331
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFSRLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|325498268|gb|EGC96127.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia
fergusonii ECD227]
Length = 611
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/325 (12%), Positives = 96/325 (29%), Gaps = 82/325 (25%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I+ G ++Q+ G+ L + + LI E L
Sbjct: 30 AAKVNGQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 89
Query: 87 KQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + V F A + +++ L++ G+ + + Q L Q
Sbjct: 90 DQYSRDLKLGISDEQVKQAIFATPAFQVDGKFDNSRYNAILNQMGMSADQYAQALRNQLT 149
Query: 144 WPDVVKN---------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
++ +++ +++ A KQ++ + + Y +
Sbjct: 150 TQQLINGIAGTDFMLKGETDELAALVSQQRVVREATIDVNAKAEKQQVSDAEITSYYDQH 209
Query: 183 V-LFSIPDN-----KLQNQGFVQKRIKDAEE--------------SRLRLPKDCNKLEKF 222
F P+ + + +Q+ + DA+ R+R K E
Sbjct: 210 KNNFVTPEQFRVSYIMLDAANIQQPVSDADIQAYYDQHQDQFTQPQRVRYSIIQTKTENE 269
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L +S + ++ K + +
Sbjct: 270 AKAVLDALNNGGDFAELAKEKSADIISARNGGDLGWLEDSTTPQELKDAGLKDKGQLSGV 329
Query: 261 YVTQKGVEYIAICDKRDLGGEIALK 285
+ G + + D + + +
Sbjct: 330 IKSSVGFLVVRLDDVQPAKVKTLAE 354
>gi|300924168|ref|ZP_07140160.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1]
gi|301049648|ref|ZP_07196597.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1]
gi|300298585|gb|EFJ54970.1| PPIC-type PPIASE domain protein [Escherichia coli MS 185-1]
gi|300419621|gb|EFK02932.1| PPIC-type PPIASE domain protein [Escherichia coli MS 182-1]
Length = 623
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGGMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|303245476|ref|ZP_07331760.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302493325|gb|EFL53187.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 576
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/324 (14%), Positives = 95/324 (29%), Gaps = 40/324 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSW--------AMSSRIRTTINGEVITDGDISKR----- 59
++L F + C++ + + A + + G I D+ R
Sbjct: 1 MRLAAPSFRGLAVCLLVFFALSALLGGCGRDTAKEPGVVAMVGGAPIRLADVEARYDLGE 60
Query: 60 IALLKLQKINGELEKIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I L ++ E + A + ++IV L +QE+ + + + +
Sbjct: 61 IGLPEVDNPPVETLRAAYGKVLADMIVARLVRQELARRHESVTEAEIAAVEKRV--RADY 118
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--DFMLKYGNLEMEIPANKQKMKNI 173
+ F L ++ I +++ LA + + ++ E K
Sbjct: 119 PGDSFDRMLLEERIDLARWREMLADRLALEKFTREVLRLEVRVEVTEAADYYKKHIDAFT 178
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
T + V +K + E R +++
Sbjct: 179 TAPRMRLTRVQGRDGAAVKAALAAYRKSGRKLESLAGR---------------SGITVRD 223
Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQ- 291
A L E +L ++ LK + +T+ G I +R KAY +
Sbjct: 224 AV-LPEKNLPAPWREALKSLKEGEPTTILTEGGESLFCILQERLPAKVIDPAKAYARVEA 282
Query: 292 -NTPTKIEKHEAEYVKKLRSNAII 314
K K A ++ + I
Sbjct: 283 ILAGGKTAKAFAAWLAETLRTTKI 306
>gi|160947418|ref|ZP_02094585.1| hypothetical protein PEPMIC_01352 [Parvimonas micra ATCC 33270]
gi|158446552|gb|EDP23547.1| hypothetical protein PEPMIC_01352 [Parvimonas micra ATCC 33270]
Length = 247
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/291 (17%), Positives = 88/291 (30%), Gaps = 60/291 (20%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSG 94
M S++ +NG I + D+ + I L+ L N E +K +EL+ + L Q+
Sbjct: 1 MESKVMAIVNGVEILESDVDRFIELMGDRALPYKNPEGKKQLCEELVKQELIIQDCYNRK 60
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V ++ I HF L
Sbjct: 61 LNESEAFVKEI-------NEITRS----------ILAKHFLNELFGDI------------ 91
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ EI ++ KN+ Y + + + ++EE L K
Sbjct: 92 --KVSDEEIKKYYEENKNLFKSRYTFK----------------AKHILVESEEKADELKK 133
Query: 215 DCNKLEKF---ASKIH----DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
C E+F A K G + + +F+N + T P TQ G
Sbjct: 134 LCENGEEFEELAKKYSMCPSKEVGGDLGEFSQGQMVLEFENACIDARVGEITKPVKTQFG 193
Query: 267 VEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + K + +K + K + + + L +A I
Sbjct: 194 YHLIMLESKTEPEQLDLETVKDEIRKNIVKAKEQIAYVKKMDALMKDAKIE 244
>gi|295111179|emb|CBL27929.1| Parvulin-like peptidyl-prolyl isomerase [Synergistetes bacterium
SGP1]
Length = 303
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 85/289 (29%), Gaps = 42/289 (14%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
+++ + G IT+ D++ + + Q + Q ++ E +
Sbjct: 31 PKPTEENQVLARVEGREITEADVNAVLQSMGPQGMMMYGNPQGRQLILDEIVSM------ 84
Query: 94 GITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
Y F A L E F F+ + + Q + VK
Sbjct: 85 ----------YLFSLEAEKEKLDGEQDFIDFMAR-------VRTQSLAQRAMRNAVK--- 124
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+K E + ++ K + R +L + R++ ++
Sbjct: 125 DVKATEEEAQKFYDEHKDQFTQPERIHARHILI----SDDATSADTIARVQADLKAGASF 180
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL--LKKSQNNTTNPYVTQKGVEYI 270
+ +K + G + + P+F + K + + P + G I
Sbjct: 181 D---EEAKKLSLCPSAPQGGDLGEFTKEQMVPEFSDAAFALKEPGDVSEPVKSPFGWHII 237
Query: 271 AICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + ++ K + T + ++ V++L+ +
Sbjct: 238 RLEGRTPAQLIPFDDV--KDQILQDLTGQQQQERIKAKVEELKKAYKVE 284
>gi|239780227|gb|ACS15392.1| PpiC-type peptidyl-prolyl cis-trans isomerase [uncultured bacterium
FLS12]
Length = 306
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 100/299 (33%), Gaps = 31/299 (10%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELIVETLKK 87
+ + +NGE + + I ++ K ++ +A ++ L
Sbjct: 15 ENAMALVVNGERVEEARIENEARQIEANPELAVDEQDPDKRKEAVQAMAKDHVVTGVLIN 74
Query: 88 QEIEKSGITFDSNTVNYFFVQHARN--TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
QE+ + ++ + + F A+ + + + Q + K+ L ++
Sbjct: 75 QEVARRHMSIPPHELEAAFEAVAQQQDAKDKPPEQGGWDENQ---ADAVKKNLEMRMKID 131
Query: 146 DVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ E ++ A + K + ++ + D + ++ +K
Sbjct: 132 RLLDEVCRDVPEPTEEDVLACYEESKDRFAVPEMIHAAHIVKHVQDGNIMDRQAAYNEMK 191
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYV 262
D + + +L S D S G + +F++++ + +
Sbjct: 192 DI-ANEIDKGATFEELAARHSDCPD-SGGDLGVFPRGQMVQEFEDVVFALEVGQVSGIFS 249
Query: 263 TQKGVEYIAICDKRDLGG---EIALKAYLSA---QNTPTKIEKHEAEYVKKLRSNAIIH 315
+ G+ + ++R + A + T+I+ +V +L+++A+I
Sbjct: 250 SCFGLHIAKLYERRPRVDKSFDEVADEVRKACATELENTRIDA----FVDELKASAVIE 304
>gi|116630072|ref|YP_815244.1| peptidylprolyl isomerase [Lactobacillus gasseri ATCC 33323]
gi|238854106|ref|ZP_04644453.1| foldase protein PrsA 1 [Lactobacillus gasseri 202-4]
gi|311110302|ref|ZP_07711699.1| foldase protein PrsA 1 [Lactobacillus gasseri MV-22]
gi|116095654|gb|ABJ60806.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus gasseri ATCC
33323]
gi|238833182|gb|EEQ25472.1| foldase protein PrsA 1 [Lactobacillus gasseri 202-4]
gi|311065456|gb|EFQ45796.1| foldase protein PrsA 1 [Lactobacillus gasseri MV-22]
Length = 298
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 90/298 (30%), Gaps = 33/298 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ I + + T G IT+ ++ + Q L + +
Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYNKMK--ESQAGQSTLASM----I 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + L+ Q G V+ + ++ + G F S L++ G+ + FK L
Sbjct: 62 VSDALESQ----YGKEVTQKQVDKEYNKYKKQYG---SQFDSVLEQNGMTASTFKDNLKT 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ PA ++K E ++ +L K + +++
Sbjct: 115 NLL--------TEAALKHIKKITPAQEKKAWKNYQPEVTVQHILV---SKKSTAEDIIKQ 163
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
+ +L + K +D A +S L F+ K T
Sbjct: 164 LKDGGDFKKLAKKYSTDTATK-----NDAGKLPAFDSTDSTLDSSFKTAAFKLKTGEITT 218
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
P TQ G I + G K + Q + E + + A +
Sbjct: 219 TPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQSVMRSVIATVLKRADV 276
>gi|17986407|ref|NP_539041.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str.
16M]
gi|62290796|ref|YP_222589.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str.
9-941]
gi|82700707|ref|YP_415281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
biovar Abortus 2308]
gi|189025011|ref|YP_001935779.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus
S19]
gi|254696195|ref|ZP_05158023.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
2 str. 86/8/59]
gi|254731113|ref|ZP_05189691.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
4 str. 292]
gi|260546060|ref|ZP_05821800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus
NCTC 8038]
gi|260758847|ref|ZP_05871195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
4 str. 292]
gi|260760571|ref|ZP_05872914.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
2 str. 86/8/59]
gi|17982000|gb|AAL51305.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str.
16M]
gi|62196928|gb|AAX75228.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 1 str.
9-941]
gi|82616808|emb|CAJ11900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
biovar Abortus 2308]
gi|189020583|gb|ACD73305.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus
S19]
gi|260096167|gb|EEW80043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus
NCTC 8038]
gi|260669165|gb|EEX56105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
4 str. 292]
gi|260671003|gb|EEX57824.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
2 str. 86/8/59]
Length = 331
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|330991867|ref|ZP_08315816.1| Cell-binding factor 2 [Gluconacetobacter sp. SXCC-1]
gi|329760888|gb|EGG77383.1| Cell-binding factor 2 [Gluconacetobacter sp. SXCC-1]
Length = 305
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 87/268 (32%), Gaps = 50/268 (18%)
Query: 42 IRTTINGEVITDGDISKRIALL--KLQKINGEL-EKIAVQELIVETLKKQEIEKSGITFD 98
+ ++NG+ I D+ + +A + +L+K+ + I + +L+ + + K+G+
Sbjct: 50 VLASVNGQDIRLNDVRQAMASMPEQLRKLPDNIIVPILLNQLVDQRAIQIAAAKAGLDKQ 109
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ +Q + YL+ Q +
Sbjct: 110 PD--------------------VQQQMQQAAQNALQNAYLSAQVA----------PTLTD 139
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE--ESRLRLPKDC 216
++ ++ E R +L ++ + +++ A+ + +L D
Sbjct: 140 EAVKTYYDQNYANKPGAEEVHARHILVK---SEAEANDIIKQLKAGADFGQLATKLSTDP 196
Query: 217 NKLEKFASKIHDVSIGKAQYLLESD-LHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICD 274
++ + G + + D L + N+ + P TQ G I +
Sbjct: 197 GSAKQ--------NGGDLGWFKKGDMLPTFWDAASAMQPNSFSQTPVHTQYGWHVIQVLG 248
Query: 275 KRDLGGEI--ALKAYLSAQNTPTKIEKH 300
KR A++ + + ++K
Sbjct: 249 KRTAPTPTLDAMRDQIRQKLIQEGVQKA 276
>gi|290510114|ref|ZP_06549484.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. 1_1_55]
gi|289776830|gb|EFD84828.1| peptidyl-prolyl cis-trans isomerase D [Klebsiella sp. 1_1_55]
Length = 624
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 90/280 (32%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDISKRIA--LLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I G +A ++Q+ G+ + + + LI E+L
Sbjct: 42 AAKVNGQEIGRGQFENAVASERNRMQQQLGDQFSELAANENYMKTMRQQVLNRLIDESLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + G++ V Q N + FS + + G+ + + Q L Q
Sbjct: 102 DQYARELGLSISDEQVKQAIFQTQAFQTNGKFDNQRFSGIVAQMGMTTDQYAQALRNQLT 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + +P ++ + ++ ++R ++ + ++
Sbjct: 162 TQQLINA-----IAGTDFMLPGESDQLAALVSQQRVVREATINVNALAAKQTVSDEEINA 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++++ R + A + ES + Q+ + ++ T P
Sbjct: 217 FWQQNQARFMAPEQFRVSYIKM-------DAASMQESASDEEIQSWYDQHKDQFTQPQRN 269
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ V I K + + L + T ++ +
Sbjct: 270 RYSV----IQTKTEADAKAVLAELQKGADFATLAKEKSTD 305
>gi|283780046|ref|YP_003370801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi
DSM 6068]
gi|283438499|gb|ADB16941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pirellula staleyi
DSM 6068]
Length = 724
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 85/289 (29%), Gaps = 33/289 (11%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK 86
P + ++ +NGE IT D+ + + + G ++ ++ L
Sbjct: 129 TSPPTMVAPSKKTLQVMAVVNGEQITRTDLGR-----ECMRRFGN---EVLESMLNRQLI 180
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNHFKQYLAIQSIWP 145
I V+ + A GL + + L ++ G + ++ + Q I
Sbjct: 181 LDACAAQNIVITEQDVDDEVDRIANKFGLPRDRWLQLLREERGFSEQEYRTTVVWQMI-- 238
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ K E+ + VR +K + +
Sbjct: 239 -ALRRLVADKIQVTPEELKMAFESEFGPKVRA------RMIAVSSKEKADQVLAAAAAKP 291
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQK 265
E + C + V + + Q ++
Sbjct: 292 ESFGDLAKQYCEDPA--VASARGVI---PPIRMHTGDPTLEQIAFSLKPGELSSVIKVAN 346
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK--LRSNA 312
+ YI +C E + L+ Q+ P + E+ + +++ LR +A
Sbjct: 347 -LYYILLC------DEQVPRMVLAPQHIPAQQERLTDK-LRENKLRVSA 387
>gi|254718001|ref|ZP_05179812.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13]
gi|265982948|ref|ZP_06095683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13]
gi|306839780|ref|ZP_07472581.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NF 2653]
gi|264661540|gb|EEZ31801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. 83/13]
gi|306405135|gb|EFM61413.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NF 2653]
Length = 331
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQTAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFTEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|52143135|ref|YP_083692.1| peptidylprolyl isomerase [Bacillus cereus E33L]
gi|51976604|gb|AAU18154.1| protein export protein [Bacillus cereus E33L]
Length = 283
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 98/306 (32%), Gaps = 50/306 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L +++ + S + T+ G IT+ ++ L+ + L ++
Sbjct: 3 KKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGESTLYQMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
+ + +++ K + G ++F S L++ G+ ++ K
Sbjct: 59 LSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLKNEDELK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + +K E ++ K+ E + +L
Sbjct: 106 EKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILIK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
K +K+ ++ +D L K S+ G+ +F+ K
Sbjct: 145 EKTAKEVKE----KVSNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKL 200
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKL 308
+ P T G I + DK++L +K + +++ ++ V L
Sbjct: 201 DAGQVSEPVKTTYGYHIIKVTDKKELKPYDEVKDQIRKDLEQQRLQDTTGKWKQQVVNDL 260
Query: 309 RSNAII 314
+A I
Sbjct: 261 LKDADI 266
>gi|260219454|emb|CBA26299.1| Probable parvulin-type peptidyl-prolyl cis-trans isomerase
[Curvibacter putative symbiont of Hydra magnipapillata]
Length = 239
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 89/278 (32%), Gaps = 48/278 (17%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGEL--EKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG+ + I + + +E+I + QE + G+
Sbjct: 5 VAIVNGKAVPKTRIDALAQQVARSGRPVTPEMQGQLREEVIAREIFVQEAQARGLDASD- 63
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
++ L+ KQ + I+ ++ D F K +
Sbjct: 64 -------EYKNQLELT------------------KQSILIRELFGD-----FQKKNPVTD 93
Query: 161 MEIPANKQKMKNI-TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E A K + +EY R +L + + Q + + + K A+ L +
Sbjct: 94 EETKAEYDKFASANAGKEYRARHILV---EKEDQAKALIAQLKKGAKFEDLAKKNSKDPG 150
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTT-NPYVTQKGVEYIAICDKRD 277
+ G + S +F + L S+ T P TQ G I + D R+
Sbjct: 151 -------SGANGGDLDWANASSYVKEFSDALTGLSKGKMTDAPVKTQFGFHIIRLEDVRE 203
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + Q ++ A++ + LR+ A +
Sbjct: 204 --AQLPKYEDVKPQIAQQLQQQKLAKFQEDLRAKAKVE 239
>gi|254230430|ref|ZP_04923809.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sp. Ex25]
gi|151937031|gb|EDN55910.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sp. Ex25]
Length = 273
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 8/134 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q+ E G+ V Q N E + + L + G
Sbjct: 79 RKSVLDRMINDVLLDQQAEALGLRISDTQVRSMILDMPQFQSNGQFDQEIYQASLRRAGF 138
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + N E +P Q + + IRT+ + +
Sbjct: 139 SPDSFAEYMR-----RELVREQLLNALQNSEFILPGEVQAEGKLFTQTRDIRTIKIDLAE 193
Query: 190 NKLQNQGFVQKRIK 203
+ ++ +
Sbjct: 194 FAKNIELTDEEIQQ 207
>gi|187918726|ref|YP_001887757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
gi|187717164|gb|ACD18387.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
Length = 250
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 93/275 (33%), Gaps = 36/275 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
I+ EV+ D+++ I LLKL L +++++ + L +K GIT ++ +
Sbjct: 4 IVRIDDEVV---DVAEFIRLLKLTGQFESL----IEQIVRDKLTVHAAKKQGITVTADEI 56
Query: 103 NYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
Q R GL A D + +LD + + F+ ++
Sbjct: 57 QQRADQFRRVRGLHRATDMNQYLDALNVSLDEFEAFITDGL------------------Y 98
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + +++Y L S + ++ V A+E L D +
Sbjct: 99 QEKMLDEIGNEAAIKDYFA---LNSPKFDAIEVSHIVLDSEGKAKEMISYLHDDPDSFAD 155
Query: 222 FASKIHDV----SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICD 274
A + + G +L L P + + + P+ + + E A+
Sbjct: 156 MAREHSIADTREAGGVIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSADRSCFEIFAVTA 215
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K + + + + + E+V + R
Sbjct: 216 KYPATLDADVASEVRRLLREGWLISRAQEHVIEAR 250
>gi|282878157|ref|ZP_06286954.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310]
gi|281299735|gb|EFA92107.1| PPIC-type PPIASE domain protein [Prevotella buccalis ATCC 35310]
Length = 484
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 81/291 (27%), Gaps = 32/291 (10%)
Query: 40 SRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + E I D+ + A + K + +++ V+ L + E +
Sbjct: 50 DEVIWVVGDEPIMKSDVEMSRLQAEAEGIKFKRNPDFAIPEQIAVQKLFLHQAELDSVKV 109
Query: 98 DSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN--- 150
+ V + G S E +G + L +V++
Sbjct: 110 QESQVTANIERQINRWIEMAGGSVERLEQ---YRGQSIAQMRSQLRDDFRNNLLVQSMQE 166
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ ++ A + + ++ + I + + +
Sbjct: 167 KLVEDVKVTPSDVRAYFKNLPEDSIPFVPTEVEVEIITRTPRILPEEINRVKDELRNYTE 226
Query: 211 RLPKD---CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVT 263
R+ K L + S+ + G+ Y L P F N+ + T
Sbjct: 227 RVTKGETTFATLARLYSEDPGSARQGGEMDYTGRGMLDPAFANVAFNLTDPKKISKIVET 286
Query: 264 QKGVEYIAICDKR-------------DLGGEIALKAYLSAQNTPTKIEKHE 301
+ G I + DKR + E K + + T++ K
Sbjct: 287 EFGFHIIQLVDKRGDKIKVRHILIKPKVTDEEVNKTLMRLDSVATQLRKDS 337
>gi|157146942|ref|YP_001454261.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Citrobacter
koseri ATCC BAA-895]
gi|157084147|gb|ABV13825.1| hypothetical protein CKO_02719 [Citrobacter koseri ATCC BAA-895]
Length = 623
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 49/366 (13%), Positives = 105/366 (28%), Gaps = 82/366 (22%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE------- 71
++I+ I+ VS S+ +N + I+ ++Q+ G+
Sbjct: 20 IIIVSFILTGVSGYLIGGSNNYAAKVNDQEISRSQFENAFNSERNRMQQQLGDQYSELAA 79
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR------------- 111
L + + LI E L Q + ++ V A
Sbjct: 80 NEGYMKTLRQQVLNRLIDEALLDQYAHELKLSISDEQVKQAIFSTAAFQVDGKFDNNRYN 139
Query: 112 ----NTGLSAEDFSSFLDKQ--------GIGDNHF-----KQYLAIQSIWPDVVK----- 149
G++A+ ++ L Q G+ F LA VV+
Sbjct: 140 AIVNQMGMTADQYAQALRNQLTTQQLIAGVAGTDFMLKGETDELAALVAQQRVVREATID 199
Query: 150 -----------------------NDFML----KYGNLEMEIPANKQKMKNITVREYLIRT 182
N FM + ++++ A ++ + + ++ Y +
Sbjct: 200 VNALAAKQQATDQEVSSYYEQNKNRFMTPEQFRVSYIKLDAAAMQETVNDADIQSYYDQH 259
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLL 238
+ + K +A+ L D L K S I + G +L
Sbjct: 260 QDQFTQPQRNRYSVIQTKTEDEAKAVLDALNKGGDFAALAKEKSADIISARNGGDMGWLE 319
Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
++ + +N K + + + G + D + + +A + +
Sbjct: 320 DATTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDVQPAKVKPLSEARDDIAAKVKQEK 379
Query: 299 KHEAEY 304
+A Y
Sbjct: 380 ALDAYY 385
>gi|56419191|ref|YP_146509.1| post-translocation molecular chaperone [Geobacillus kaustophilus
HTA426]
gi|81675918|sp|Q5L289|PRSA_GEOKA RecName: Full=Foldase protein prsA; Flags: Precursor
gi|56379033|dbj|BAD74941.1| post-translocation molecular chaperone [Geobacillus kaustophilus
HTA426]
Length = 281
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 98/305 (32%), Gaps = 45/305 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + + +S S S I T NG IT + + + K
Sbjct: 1 MKKWMMAAAVVSLMALSACSNDGSEAIVETKNGN-ITKDEFYNEM--------KERVGKS 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+++LI E + ++ + ++ + G + + + G
Sbjct: 52 VLRDLIDEKVLSKKYK-----VTDEEIDREIERIKEAYG---TQYDLAVQQNG------- 96
Query: 136 QYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + + + D+++ ++ E E+ K P + +
Sbjct: 97 EKVIREMVKLDLLRTKAAVEDIKVTEKELKEYYDNYK----------------PKIRASH 140
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LK 251
++ +++L +D +KL K S+ + G + + +F+ K
Sbjct: 141 ILVKDEKTAKEVKAKLDKGEDFSKLAKEYSQDPGSASNGGDLGWFGPGKMVKEFEEAAYK 200
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRS 310
++P T G I + DK +K ++ + K++ V KL
Sbjct: 201 LKVGEVSDPVKTDYGYHIIKVTDKEKKKSFNEMKDEIAFEVKRNKLDPATMQSKVDKLVK 260
Query: 311 NAIIH 315
+A +
Sbjct: 261 DAGVE 265
>gi|254797079|ref|YP_003081917.1| hypothetical protein NRI_0706 [Neorickettsia risticii str.
Illinois]
gi|254590325|gb|ACT69687.1| conserved hypothetical protein [Neorickettsia risticii str.
Illinois]
Length = 307
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 54/153 (35%), Gaps = 20/153 (13%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-KIAVQE 79
V+ + ++ S S+++ + + +I++ D+ L+ + +L A+++
Sbjct: 4 VICVVFLLSFFSLPSYSIEVKTAAMVGDVIISNQDVHNYQNLVVMLGEKSDLSYSAALEQ 63
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH----FK 135
+I + Q ++ G+ F + L GI +
Sbjct: 64 MIDLEVCYQYAKRVGLPFSDQKYDAAL---------------KHLQALGINRGAHVGLLE 108
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
+YL Q +VV + + + A K+
Sbjct: 109 EYLKKQVFLSEVVDQIIRPRVRIDDSDFDAIKR 141
>gi|295688302|ref|YP_003591995.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis
ATCC 21756]
gi|295430205|gb|ADG09377.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter segnis
ATCC 21756]
Length = 329
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 96/292 (32%), Gaps = 49/292 (16%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVET 84
V+ K +NG+VI D+ + L I+ E+ + + E+I +
Sbjct: 39 VADKPPEPGDTAVARVNGQVIWASDVKREAVAQGLISEGEPLDISSEVFRQRLDEVIDQK 98
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L E K I D A+ ++ + +
Sbjct: 99 LLAAEAMKRKIDKDP---------MAQR-----------------RLAAARERILGDMLV 132
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
VV+ + ++ A +QK+ + E R ++ ++ + + +
Sbjct: 133 EGVVEKAVTE---DAIRKLYAEQQKLSKRS-EEIRARQIIV---GSQAEAESVKKLLATG 185
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVT 263
A L + + ++ +F + G Y + + LK +Q P+
Sbjct: 186 ASFDALAMERSTDQATRF-------NGGDLGYFTLDVMPEPYGVALKDAQKGALVGPFAA 238
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ G + + DKR + I L+A Q + ++KLR +A +
Sbjct: 239 EGGWVLVRVEDKR-VEEPITLEAA-RPQIVRFLTYDQVRDILEKLRGSAKVE 288
>gi|299142782|ref|ZP_07035911.1| ppic-type ppiase domain-containing protein [Prevotella oris C735]
gi|298575811|gb|EFI47688.1| ppic-type ppiase domain-containing protein [Prevotella oris C735]
Length = 477
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 85/265 (32%), Gaps = 41/265 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
V+I ++ S + + T+NG+ + + A K K
Sbjct: 3 KRKSVIISLAMLLCGSMAFSQSNDPVVMTVNGKPVLRSEFE--YAYRKNNSAGVIDRKSV 60
Query: 77 VQ--EL-IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ EL I LK + + + +T+ F + A
Sbjct: 61 AEYAELFIDYKLKVEAALAAQL----DTLTSFQEEFAGCRD------------------- 97
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
Q + I ++ + Y + ++ + +K +R +L + +
Sbjct: 98 --QQIRPSLINDADIEAEARRIYTLTQHQVDSLGGMVK--------VRHILLELGQRAPK 147
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQF-QNLL 250
+ K+ D+ L+ D +++ + S K + G +L P+F
Sbjct: 148 STETEVKQRIDSIYKALKAGADFSEMARKYSDDKGSASAGGSLPWLQPGQTLPEFEAQAY 207
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + + P+++ G I + DK
Sbjct: 208 RLKKGEMSLPFLSPAGYHIILLEDK 232
>gi|288929626|ref|ZP_06423470.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral
taxon 317 str. F0108]
gi|288329131|gb|EFC67718.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella sp. oral
taxon 317 str. F0108]
Length = 458
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 86/290 (29%), Gaps = 20/290 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQE 89
+ ++ + + E I D+ + A + K G + ++L ++ L +
Sbjct: 24 AVPESSVVDEVIWVVGDEPILKSDVEAARLQAENEGHKFKGNPDCSIPEQLALQKLFLHQ 83
Query: 90 IEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+ + ++ + S E + + + +Q +
Sbjct: 84 AAIDSLEVSESEISQGIEEQINYWIQLIGSKEKLEEYRKQ---TISEMRQAMHDDYKNNR 140
Query: 147 VV---KNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
++ K + ++ + V + ++ P K + ++
Sbjct: 141 LIAMMKEKLVSDVKVSPADVRKYFKDLPADSIPMVPTMVEVEIITQNPKVKTEEVNRIKD 200
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNN 256
++++ + + L + S+ + G+ + + P F + N
Sbjct: 201 QLREYTDRVTKGETTFATLARLYSEDPGSARQGGELGFTGRAAFDPAFAAVAFNLTDPNK 260
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ T+ G I + DKR G +I ++ L +
Sbjct: 261 ISKIVETEFGYHIIQLIDKR--GDKINVRHILLKPRIAQDDIDRSKARLD 308
>gi|227499598|ref|ZP_03929705.1| possible peptidylprolyl isomerase [Anaerococcus tetradius ATCC
35098]
gi|227218357|gb|EEI83611.1| possible peptidylprolyl isomerase [Anaerococcus tetradius ATCC
35098]
Length = 249
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 90/272 (33%), Gaps = 46/272 (16%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKI--NGELEKIAVQELIVETLKKQEIEKSGITFD 98
++ +NG+ I D+ + + ++ + + E I E+I + + + G D
Sbjct: 7 KLLAEVNGKKIYQEDVYQLMQNIEDNQRFNSEEGLHILADEMINQEILLADAYNEGYDKD 66
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ + +N L ++ + + KQY
Sbjct: 67 KEFVDEL--ELVKNNMLKNYAMHKIFEQVKLDEAEVKQY--------------------- 103
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
ANK+ + + Y +L + QK ++ + + +
Sbjct: 104 ----YEANKETLNPPVL--YEASHILV-------NDLAEAQKIKEEID----KGLEFAVA 146
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+K++ + G + + +FQ+ L + + P +Q G I + +K +
Sbjct: 147 AKKYSIDPSKANGGSLGKFPKGVMVKEFQDGLDSINIGEVSKPIKSQFGYHLIKLENKEN 206
Query: 278 LGGEIALKAYLSAQNTPTKI-EKHEAEYVKKL 308
+ + + Q + K + Y+ KL
Sbjct: 207 V--DTPSFDKIKDQVYQRLLMVKRQEAYLDKL 236
>gi|218710170|ref|YP_002417791.1| peptidyl-prolyl cis-trans isomerase D [Vibrio splendidus LGP32]
gi|218323189|emb|CAV19366.1| Peptidyl-prolyl cis-trans isomerase D [Vibrio splendidus LGP32]
Length = 621
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 56/162 (34%), Gaps = 15/162 (9%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FLDKQ 127
K + +I + L +Q+ E G+ + + ++ + +A F L +
Sbjct: 88 RKSVLDRMINDVLLEQQAESLGLRISDSQIRTMILEMPQ--FQTAGQFDQEVYQSALRRA 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G F +Y+ D+++N + E + + + IRTV S+
Sbjct: 146 GFSAESFAEYMR-----RDLMRNQLVTALQGSEFVLQGEIDIQSKLIAQTRDIRTVTLSV 200
Query: 188 PDNKL---QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
D +++ ++ + R + + +++
Sbjct: 201 ADLAKTIELTDEQIEQYYQENPAAYTRPEQAKVSYIELSAEA 242
>gi|91228613|ref|ZP_01262531.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 12G01]
gi|269965576|ref|ZP_06179690.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 40B]
gi|91187845|gb|EAS74159.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 12G01]
gi|269829801|gb|EEZ84036.1| peptidyl-prolyl cis-trans isomerse D [Vibrio alginolyticus 40B]
Length = 619
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q+ E G+ V Q N E + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDTQVRSMILDMPQFQSNGQFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + N E +P Q + + IRT+ + +
Sbjct: 148 SPDSFAEYMR-----RELVREQLLNALQNSEFILPGEVQAEGKLFTQTRDIRTIQIDLAE 202
Score = 42.7 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 92/284 (32%), Gaps = 34/284 (11%)
Query: 52 TDGDISKRIALLKLQKINGELEKIA---VQELIVETL--------------KKQEIEKSG 94
++G + I L++ + A +EL+ E L + E +
Sbjct: 129 SNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQNSEFILPGEVQAEGKLFT 188
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK--QYLAIQSIWPDVVKNDF 152
T D T+ + A+N L+ E+ + ++F + + + I
Sbjct: 189 QTRDIRTIQIDLAEFAKNIELTDEEIQEYYKA---NPDNFTRPEQVKVSYIELSAEALKE 245
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + E++ ++ K + + + +L + ++ Q + +
Sbjct: 246 QVNVSDAEVKKYYDEHLNKYSSEEQRRVAHILV-----EGDDEAKAQAILDELNAGADFA 300
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
K + F S + G ++ + P F+ K+ +T+ + G I
Sbjct: 301 TLAQEKSDDFGSAENG---GDLGWIERDVMDPAFEEAAFALKNPGDTSGLVKSDFGYHII 357
Query: 271 AICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + +D + + A + + + E +L A
Sbjct: 358 KLEELKDSVAKPFEEVAAEIKQEMVDQQAIDQFYELQNELERVA 401
>gi|221236099|ref|YP_002518536.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
gi|220965272|gb|ACL96628.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
Length = 323
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 49/305 (16%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGE 71
++I C V+ K +NG+VI D+ + L I+ E
Sbjct: 17 ACALMIASCGQNKVAEKPPEPGDTAVARVNGQVIWASDVKREAVAQGLISEGEPLDISSE 76
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + + E+I + L E K + D A+
Sbjct: 77 VFRQRLDEVIDQKLLAAEAVKRKLDKDP---------LAQR-----------------RL 110
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
++ + + VV+ + ++ A +QK+ + E R +L ++
Sbjct: 111 AAARERILGDMLVEGVVEKAVTE---DAIRKLYAEQQKLSKRS-EEIRARQILV---GSQ 163
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ + + A L + + ++ +F + G Y + + LK
Sbjct: 164 AEAESIKKLLATGASFDALAMERSTDQATRF-------NGGDLGYFTLDVMPEAYGAALK 216
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+Q P+ + G + + DKR I L+A Q + ++KLR
Sbjct: 217 DAQKGALIGPFAAEGGWVLVKVEDKR-TEEPITLEAA-RPQIIRFLTYDQVRDILEKLRG 274
Query: 311 NAIIH 315
+A +
Sbjct: 275 SAKVE 279
>gi|329962622|ref|ZP_08300570.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057]
gi|328529653|gb|EGF56551.1| PPIC-type PPIASE domain protein [Bacteroides fluxus YIT 12057]
Length = 523
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 57/321 (17%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISK 58
M SK+ T + + I+F + + A + ING+ + ++ + +
Sbjct: 1 MQSKMMT--------MVKSGLAILFLLSGLAVI---AQPDPVLMRINGKEVFRSEFEYAC 49
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
R KL + + + + LK E E +G+ +AE
Sbjct: 50 RQN-GKLADGVRKQRQDLLDWFVNFKLKVAEAEAAGLD-------------------TAE 89
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
F S LD K YL + V + + K + +
Sbjct: 90 VFRSRLDS--CRRQLVKSYLTDEETNERVARRFY-----------DKMKSGRRAG---QV 133
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ + S+P N + D+ L + + D L
Sbjct: 134 RVSHIYKSLPQNISGYTLRKVEAKMDSIYESLGKGATAAAFDAYVKDFSDDKTTFWVRWL 193
Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTK 296
+ +F+ + + P+ T +G+ + + +++ + + + + +
Sbjct: 194 --QMPAEFEEVAFDLQPGEISRPFFTPQGIHIVKVLERKAVPPFDEVKEEMIRCRTRRHG 251
Query: 297 IEKHEAEYVKKLRSNAIIHYY 317
++K V+KL+ Y+
Sbjct: 252 MDKGTEALVEKLKQ----EYH 268
>gi|325522151|gb|EGD00807.1| putative peptidylprolyl isomerase [Burkholderia sp. TJI49]
Length = 280
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 84/312 (26%), Gaps = 47/312 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIALLKLQKI 68
I +++ L C PI + + +N I D+ I Q +
Sbjct: 6 ISIVSALIALACACGAPIARAAGTKTETPLLPGVEAVVNDTPIARSDVDSMIEASG-QAV 64
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L A +ELI L +Q EK + + + + +
Sbjct: 65 TPALRAQAKRELIARQLLEQTAEK--------------ADYGSR-----PEVNRVVTRAR 105
Query: 129 IGDNH---FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+ + Q++ VK + + N EY +
Sbjct: 106 TVAATDLYVRDNVHPQAVTDAEVKARY--------------DHIVANAAQFEYRAEVIAV 151
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ P +++ ++ + ++ V+ G L P
Sbjct: 152 ADPAQMNTVIAALKQGAAFDTLAKQYNTTPNGGVAQWVELRTPVAEGSTGGLPT----PI 207
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAE 303
+ + P + + + +KR A K L Q ++ A
Sbjct: 208 AEAITSLQPGAVAGPIRIGNALAIVKLDEKRPTTVPTFDAAKKVLRQQLEAEAQQRAMAA 267
Query: 304 YVKKLRSNAIIH 315
V KL + A I
Sbjct: 268 LVDKLAAQATIQ 279
>gi|158319280|ref|YP_001511787.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
oremlandii OhILAs]
gi|158139479|gb|ABW17791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
oremlandii OhILAs]
Length = 249
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 90/284 (31%), Gaps = 51/284 (17%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKSGIT 96
++ T+ G IT D + L Q+ + +K VQEL+ + L E K+G+
Sbjct: 5 KVLATVGGREITQQDFDLLLGSLNPQQAMQFNSEAGKKQLVQELVNQELFLLEALKNGL- 63
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ F+Q A+ + Q +V+KN + +
Sbjct: 64 ----DKDEVFIQEAQRMH---------------------DNILKQYAMHNVLKNATVSEE 98
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKD 215
L Y T F P++ + V+ K E + +
Sbjct: 99 DMLNY----------------YNEHTDSFKEPESMQASHILVESEEKANEVLKEINEGLS 142
Query: 216 CNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAIC 273
+ K S + G + + P+F+N + P TQ G I
Sbjct: 143 FEEAAKKHSTCPSNAQGGDLGHFTRGRMVPEFENAAFDMEVGAVSAPVKTQFGYHIIKAV 202
Query: 274 DKRDLGGEIALKAYLS--AQNTPTKIEKHEAEYVKKLRSNAIIH 315
+K + + + + Q + K ++ V +L+ +
Sbjct: 203 NKVEESVKPFAEVKMQLNQQLSMMKQQELYLNKVDELKKEYEVQ 246
>gi|23502793|ref|NP_698920.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330]
gi|163843966|ref|YP_001628370.1| parvulin-like PPIase precursor [Brucella suis ATCC 23445]
gi|23348814|gb|AAN30835.1| peptidyl-prolyl cis-trans isomerase [Brucella suis 1330]
gi|163674689|gb|ABY38800.1| Parvulin-like PPIase precursor [Brucella suis ATCC 23445]
Length = 331
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|163788662|ref|ZP_02183107.1| putative exported peptidyl-prolyl cis-trans isomerase
[Flavobacteriales bacterium ALC-1]
gi|159875899|gb|EDP69958.1| putative exported peptidyl-prolyl cis-trans isomerase
[Flavobacteriales bacterium ALC-1]
Length = 484
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 87/291 (29%), Gaps = 24/291 (8%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGIT 96
+ + + ++ + D+ + IA L+ Q N G L+ L + + +
Sbjct: 58 ADGVAAVVGDFILLESDLDREIAQLEAQGANLEGVTRCELFGSLLEGKLYAHQAIQDSVL 117
Query: 97 FDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ---------YLAIQSI 143
+ + V T + + +K + + YLA++
Sbjct: 118 VNELYIQSQVEQRLQYLLAQTKRDMQYLLNIYNKD--SEEALRDEMFEITKNEYLALEM- 174
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
V + + + + + K I E + ++ + Q + K
Sbjct: 175 -QKKVTGEIEVTPEEVRQFFNSIPEDEKPIFGTELKLAEIVVIPEVTQAAKQAVIDKLKG 233
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLESDLHPQFQNL-LKKSQNNTTNP 260
+ K+ + G + + +F+ + + + P
Sbjct: 234 FKRDVEENGASFTTKVLFYTDDKPSKPNGGLYKLNRKQPRMVKEFREVAFSLQEGEISEP 293
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ T+ G I + R + L + T I+K + + ++R+
Sbjct: 294 FETEYGYHIILLEKIRGQQYD-VRHILLRPELTQDAIQKA-KDEIDEVRAK 342
>gi|221066302|ref|ZP_03542407.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni KF-1]
gi|220711325|gb|EED66693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni KF-1]
Length = 263
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 100/301 (33%), Gaps = 52/301 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE--KIAVQE 79
L ++ + + + S++ +NG+ + ++ A ++ E K+ E
Sbjct: 8 LARIVGATVLGFAALSASAQNVAIVNGKAVPMARVNALKAQIEASGQPVAPEMDKMIKDE 67
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+I + QE + G+ + + + A
Sbjct: 68 VIAREVFMQEANRRGLAASEA--------YKQQMDM-----------------------A 96
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q++ + DF K + E A K ++ +EY +L D
Sbjct: 97 RQTVLIRALFEDFQKKNPVTDAEAKAEYDKFVEANGGKEYKASHILVESED--------- 147
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255
A + ++ K + K SK G + ++ P+F + L+K +
Sbjct: 148 ---RAKAIIAEVKAGKKFEDIAKKESKDPGSGARGGDLDWANPNNYVPEFTEALIKLKKG 204
Query: 256 NTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P +Q G I + D+R E+ + Q T ++ ++ +LR +A I
Sbjct: 205 EMTDAPVKSQFGWHIIRMDDERQ--AEMPKFEDVKPQITQQLQQQKLQQFQDQLRKSAKI 262
Query: 315 H 315
Sbjct: 263 Q 263
>gi|332094597|gb|EGI99643.1| PPIC-type PPIASE domain protein [Shigella boydii 5216-82]
Length = 623
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 91/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETGELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|260432023|ref|ZP_05785994.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415851|gb|EEX09110.1| ppic-type ppiase domain protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 282
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 93/297 (31%), Gaps = 45/297 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
+ + + V+ +S + + +NG+ IT L + L Q+
Sbjct: 10 SLALAAVMALPVAAESQPSTDTVVARVNGDEIT---------LGHVIATAASLPPQ-YQQ 59
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
L E L + +E+ + + L E+ L Q
Sbjct: 60 LDDEVLYQFIVEQLIQQQLLSQEQEGLTRL---NALMLENEERSLKA----VQTVNQITD 112
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q D ++ + ++ + E E+ +L + + + + +
Sbjct: 113 AQVT-DDAIQAAYDAQFAEFQGE-------------DEFNASHILVATEEEAKEIKAQLD 158
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
AE ++ + ++ + G + + + P+F Q ++ + +
Sbjct: 159 DGADFAELAKEK-----------STGPSGPNGGALGWFGKGQMVPEFEQAVIGLEKGQVS 207
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+P TQ G + + DKR E A + + + ++ + +L +
Sbjct: 208 DPVQTQFGWHVVILNDKR--KSEAPELAEVRDELAQSVRQEAIQAKIDELTQAGNVE 262
>gi|300361160|ref|ZP_07057337.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus gasseri JV-V03]
gi|300353779|gb|EFJ69650.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus gasseri JV-V03]
Length = 298
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 90/298 (30%), Gaps = 33/298 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ I + + T G IT+ ++ + Q L + +
Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYNKMK--ESQAGQSTLASM----I 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + L+ Q G V+ + ++ + G F S L++ G+ + FK L
Sbjct: 62 VSDALESQ----YGKDVTQKQVDKEYNKYKKQYG---SQFDSVLEQNGMTASTFKDNLKT 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ PA ++K E ++ +L K + +++
Sbjct: 115 NLL--------TEAALKHIKKITPAQEKKAWKNYQPEVTVQHILV---SKKSTAEDIIKQ 163
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
+ +L + K +D A +S L F+ K T
Sbjct: 164 LKDGGDFKKLAKKYSTDTATK-----NDAGKLPAFDSTDSTLDSSFKTAAFKLKTGEITT 218
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
P TQ G I + G K + Q + E + + A +
Sbjct: 219 TPVKTQYGYHVIKMIKHPAKGTLKEHKKQIDNQIYQSMSEDQSVMRSVIATVLKRADV 276
>gi|37679292|ref|NP_933901.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016]
gi|37198035|dbj|BAC93872.1| parvulin-like peptidyl-prolyl isomerase [Vibrio vulnificus YJ016]
Length = 625
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q E G+ V + ++ + + + + L + G
Sbjct: 94 RKSVLDRMINDVLLDQHAESLGLRISDAQVRSMILAMPEFQQDGKFNQDVYQATLRRAGY 153
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ +++++ + E +P + + +RTV +I D
Sbjct: 154 SPDSFAEYMR-----RELIRSQLLDALQTSEFTLPGEVDAEGKLFTQTRDVRTVTLNIRD 208
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK 214
+ + K +E++ R +
Sbjct: 209 FADKVTLTEEDIQKYYDENKSRFTR 233
>gi|150003018|ref|YP_001297762.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC
8482]
gi|319642196|ref|ZP_07996856.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A]
gi|149931442|gb|ABR38140.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC
8482]
gi|317386182|gb|EFV67101.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_40A]
Length = 456
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 95/288 (32%), Gaps = 37/288 (12%)
Query: 14 KLLTTYF-VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKING 70
KL+ T L++ + Y + + + E I D+ + A + +K +G
Sbjct: 3 KLMCTKVYALMLMLFAVVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDG 62
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------S 116
+ I ++L ++ L + I + N+ Q + +
Sbjct: 63 DPYCIIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKT 122
Query: 117 AEDFSSFLD---KQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ L + G +Q + I P V+ F + IP
Sbjct: 123 STQIREMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIP-------- 174
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-- 230
+ ++ + P + V+K ++D E + L + S+
Sbjct: 175 ---TQVEVQIITME-PKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRR 230
Query: 231 IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
G+ ++ ++L P++ N+ + N + ++ G I + +KR
Sbjct: 231 GGELGFMGRAELVPEYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR 278
>gi|153005190|ref|YP_001379515.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
gi|152028763|gb|ABS26531.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
Length = 320
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 84/279 (30%), Gaps = 52/279 (18%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+ ++ ++ + E +K ++ LI L +E + G+ D V
Sbjct: 44 LDEQSPFIRARYSALERKKEFLENLIRFELLAREAQAKGLDKDP-EVQ------------ 90
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN---KQKMKN 172
K+ + +Q +V+ F + G + + +
Sbjct: 91 ----------------ETLKK-IMVQ----KLVRQAFDSEAGKPADDEARKYYDEHLDEF 129
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD---- 228
+ + V+F+ P + ++ PK+ A ++ D
Sbjct: 130 VKPERARVSAVIFAAPAGSPDRAAKAGQAKNALARLKVEGPKNPLAFSNLARELSDDPVT 189
Query: 229 -VSIGKAQYLLESDLHPQFQNLLKKSQ------NNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ G Y + +L Q L + + T +G + + R +
Sbjct: 190 KAAGGDLGYRTKEELSAQHSPELANAAFALREVGQESGVVETPRGFAILKL-GARQAPID 248
Query: 282 IAL---KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KA ++A+ K YVK LR A I +
Sbjct: 249 RPFDEVKAQIAARIGRESRTKEFDSYVKGLREKASIEIF 287
>gi|13472995|ref|NP_104562.1| cell binding factor 2 precursor [Mesorhizobium loti MAFF303099]
gi|14023743|dbj|BAB50348.1| mll3467 [Mesorhizobium loti MAFF303099]
Length = 303
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/328 (14%), Positives = 102/328 (31%), Gaps = 76/328 (23%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSS-----------RIRTTINGEVITDGDI----- 56
+ L F L C+ P+++ ++ + + T+NG+ +T+ D+
Sbjct: 10 LASLGLAFGLSALCLSPVMAQEAAPAAPAAPAAAPVDPNAVVATVNGQPLTEADLVLAEG 69
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+L + A+ I + + G+ D + R
Sbjct: 70 ELSQQFAQL--PPEQRRAAALSAAIEIRVMAAKAVTDGLDKDPD--------FQRRM--- 116
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+FL ++ + ++V+ + K + E+ +++ V
Sbjct: 117 -----AFLQQRALH--------------GEMVEKGVVNKVTDAEIRARYDQEIANTPPVN 157
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
E R +L + + +++ + +L + K + G +
Sbjct: 158 EVHARHILVKTKEEA---EAIIKQLDGGGDFQKLANEHTSDPSGK-------SNGGDLGW 207
Query: 237 LLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDKR-------DLGGEIALKAY 287
+ P+F + T P TQ G I + DKR D + A +A
Sbjct: 208 FGPGQMVPEFDKAAFALEVGKYTEQPVQTQFGWHVIKLEDKRAKQPPAFDDVKDQAKQAV 267
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + VK LR+ A +
Sbjct: 268 IRDKYFA---------LVKSLRAGAKVE 286
>gi|260467140|ref|ZP_05813318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
opportunistum WSM2075]
gi|259029064|gb|EEW30362.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
opportunistum WSM2075]
Length = 309
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 91/289 (31%), Gaps = 65/289 (22%)
Query: 41 RIRTTINGEVITDGDI-----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
+ T+NG+ +T+ D+ +L + A+ I + + +G+
Sbjct: 55 AVVATVNGQPLTEADLMLAEGELSQQFAQL--PPEQRRAAALSAAIEIRVMAAQAVTTGL 112
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
D + R +FL ++ + ++V+ + K
Sbjct: 113 DKDPD--------FQRRM--------AFLQQRALH--------------GEMVEKGVVAK 142
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+ +++ V E R +L + + +++ A+ +L
Sbjct: 143 VTDAEVRARYDQEIANTPPVNEVHARHILVKTKEEA---EAIIKQLDGGADFQKLANEHT 199
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
+ K S G + + P+F + T P +Q G I +
Sbjct: 200 SDPSGK-------TSGGDLGWFGPGQMVPEFDKAAFALEVGKYTEQPVQSQFGWHVIKLE 252
Query: 274 DKR-------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
DKR D + A +A + + VK LR+ A +
Sbjct: 253 DKRTKQPPAFDDVKDQAKQAVIRDKYFA---------LVKSLRAGAKVE 292
>gi|225853381|ref|YP_002733614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
ATCC 23457]
gi|254694570|ref|ZP_05156398.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
3 str. Tulya]
gi|254700583|ref|ZP_05162411.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5
str. 513]
gi|254707533|ref|ZP_05169361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis M163/99/10]
gi|254713643|ref|ZP_05175454.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M644/93/1]
gi|254716003|ref|ZP_05177814.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M13/05/1]
gi|256045546|ref|ZP_05448429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 1 str. Rev.1]
gi|256112274|ref|ZP_05453195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 3 str. Ether]
gi|256158440|ref|ZP_05456338.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M490/95/1]
gi|256253860|ref|ZP_05459396.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94]
gi|256263138|ref|ZP_05465670.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 2 str. 63/9]
gi|256370345|ref|YP_003107856.1| peptidyl-prolyl cis-trans isomerase [Brucella microti CCM 4915]
gi|260169365|ref|ZP_05756176.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|260562856|ref|ZP_05833342.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 1 str. 16M]
gi|261214896|ref|ZP_05929177.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
3 str. Tulya]
gi|261217772|ref|ZP_05932053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M13/05/1]
gi|261220998|ref|ZP_05935279.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94]
gi|261315013|ref|ZP_05954210.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis M163/99/10]
gi|261321380|ref|ZP_05960577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M644/93/1]
gi|261751092|ref|ZP_05994801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5
str. 513]
gi|261758885|ref|ZP_06002594.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|265991973|ref|ZP_06104530.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 1 str. Rev.1]
gi|265993706|ref|ZP_06106263.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 3 str. Ether]
gi|265996958|ref|ZP_06109515.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M490/95/1]
gi|294851184|ref|ZP_06791857.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL
07-0026]
gi|225641746|gb|ACO01660.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
ATCC 23457]
gi|256000508|gb|ACU48907.1| peptidyl-prolyl cis-trans isomerase [Brucella microti CCM 4915]
gi|260152872|gb|EEW87964.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 1 str. 16M]
gi|260916503|gb|EEX83364.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella abortus bv.
3 str. Tulya]
gi|260919582|gb|EEX86235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti B1/94]
gi|260922861|gb|EEX89429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M13/05/1]
gi|261294070|gb|EEX97566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M644/93/1]
gi|261304039|gb|EEY07536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis M163/99/10]
gi|261738869|gb|EEY26865.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|261740845|gb|EEY28771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 5
str. 513]
gi|262551426|gb|EEZ07416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella ceti
M490/95/1]
gi|262764687|gb|EEZ10608.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 3 str. Ether]
gi|263003039|gb|EEZ15332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 1 str. Rev.1]
gi|263093040|gb|EEZ17190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
bv. 2 str. 63/9]
gi|294819773|gb|EFG36772.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL
07-0026]
gi|326409944|gb|ADZ67009.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
M28]
gi|326539657|gb|ADZ87872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brucella melitensis
M5-90]
Length = 331
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|121594044|ref|YP_985940.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
gi|120606124|gb|ABM41864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
Length = 261
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 57/309 (18%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ + + + + + + +NG+ + +R +LK Q
Sbjct: 1 MKKKLLSGLVAAAVLGTMALPVAAQNL-AIVNGKAVP----KERAEVLKQQVERSGRPVT 55
Query: 71 -ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
ELE +E+I + QE +K G+ + L
Sbjct: 56 PELENQIKEEVIAREIFMQEAQKRGLEGS--------ADYKAQMEL-------------- 93
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIP 188
A Q+I + DF + EI A K + +EY +L
Sbjct: 94 ---------ARQTILIRELFVDFQKNNAVTDAEIQAEYDKFVAANAGKEYKASHILV--- 141
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-Q 247
+ + + + + K + + + + G + S +F +
Sbjct: 142 EKEDEAKAIIASIKKGGKFEDIAKKQSKDPG-------SGTRGGDLDWASPSSYVAEFTE 194
Query: 248 NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
L+K + T P +Q G I + D R+ ++ + Q ++ A++ +
Sbjct: 195 ALVKLEKGKMTQTPVKSQFGWHVIRLDDVRE--AQLPKLEEVKPQIAQQLQQQKLAKFQE 252
Query: 307 KLRSNAIIH 315
LR+ A +
Sbjct: 253 DLRAKAKVE 261
>gi|294507423|ref|YP_003571481.1| peptidyl-prolyl cis-trans isomerase D [Salinibacter ruber M8]
gi|294343751|emb|CBH24529.1| Putative peptidyl-prolyl cis-trans isomerase D [Salinibacter ruber
M8]
Length = 691
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/336 (10%), Positives = 94/336 (27%), Gaps = 59/336 (17%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELI 81
+ + ++R T+NG I + D + + + + ++ + + A +++
Sbjct: 34 FSAMNQTNRNVATVNGNPIQNEDYQRILKRQRQRFQQQMGGDMNPQMESRVRERAYNQVV 93
Query: 82 VETLKKQEIEKSGITFDSNTVNYFF----------VQHARNTGLSAEDFSSFLDK----- 126
+ L +QE+++ GI+ + V Q A +TG +
Sbjct: 94 NQELLQQEMKRLGISVTDSEVEAMVFGENPHPVIRRQFADSTGQINYQLLQNMASNPEAR 153
Query: 127 -QGIGDNHFKQYLAIQSIWPDVVK--------------NDFMLKYGNLEMEIPANKQKMK 171
Q I F + Q +V+ + + +
Sbjct: 154 TQWIKLEEFLRRQRRQQKMSSLVQSTIQVSEADIKDYYRRQNSSASAQYVALRYARVSDD 213
Query: 172 NITVREYLIR------------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ITV E +R ++ + + A +
Sbjct: 214 SITVTESDLRDYYDNNREAYKREKTVTLQYATTSKEATAEDSSGIAGDLAGLRADFATTE 273
Query: 220 EKFASKIHDVSIGK--AQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDK 275
+++ S + Y ++ + + + S P + + D
Sbjct: 274 NDSLFLLNNASDQDFSSAYRTPDQMNARVADSVYASPEPGRIVGPVFGGGQAHLLKVRDT 333
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
R + ++ + E ++ +R +
Sbjct: 334 RPAENDFLHARHILLKTDQADSEVAGR--LRAIRDS 367
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 37/161 (22%), Gaps = 9/161 (5%)
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
S +DFSS + + S++ + + +
Sbjct: 281 NNASDQDFSSAYR----TPDQMNARV-ADSVYASPEPGRIVGPVFGGGQAHLLKVRDTRP 335
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
R +L + G ++ E +++ G
Sbjct: 336 AENDFLHARHILLKTDQADSEVAGRLRAIRDSLEAGAAFF---AEMARRYSDDGSASDGG 392
Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272
+ + F++ P ++ G I +
Sbjct: 393 DLGWFARGSMVDAFEDAAFGAEPGTLVGPVRSEFGYHLIRV 433
>gi|163850906|ref|YP_001638949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
extorquens PA1]
gi|163662511|gb|ABY29878.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
extorquens PA1]
Length = 300
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 44/279 (15%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ +NG+ IT D++ A + G E L+ + + ++ +S
Sbjct: 47 ETVVARVNGQAITAADLAI-AAEDPALSLPGVDEGAKQNLLVDYMVDLKVGAQA---AES 102
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
V +F L F+ L + K +
Sbjct: 103 AEVGDA------------PEFKRKLAY-------FRDKLLLDDYLEREAKKAVTPEAAKA 143
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E K + E R +L +++ +K +R++ +D K+
Sbjct: 144 LYEQTVKSMKPEE----EVRARHILV-------ESEDEAKKI-----AARVKGGEDFAKI 187
Query: 220 EKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
SK G + + + F + K + ++P TQ G + + +KR
Sbjct: 188 AGEVSKDPGSKTEGGDLGWFSQERMVKPFADAAFKMTPGQVSDPVKTQFGWHVLRVEEKR 247
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + Q K + + + KLR A +
Sbjct: 248 TKP--VPTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284
>gi|308271060|emb|CBX27670.1| hypothetical protein N47_H24920 [uncultured Desulfobacterium sp.]
Length = 185
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKKQEIEK 92
+NG I D ++ + + Q N +++K ++++I L QE K
Sbjct: 14 IAVVNGVGIKKEDFTRELFAFEEQYANRGEKPDEKALSDMKKKVLEKMIETELLYQESVK 73
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
+G + +TV+ F + +A++F+ L + + + K + + +F
Sbjct: 74 NGFKVEDSTVDEQFNKFKGQFK-NADEFNKELARVKLTEASLKNQIRQVMTIQQYINKEF 132
Query: 153 MLKYGNLEMEI 163
+ K + EI
Sbjct: 133 VEKIKISDEEI 143
>gi|27363507|ref|NP_759035.1| peptidyl-prolyl cis-trans isomerase ppiD [Vibrio vulnificus CMCP6]
gi|27359623|gb|AAO08562.1| Peptidyl-prolyl cis-trans isomerase ppiD [Vibrio vulnificus CMCP6]
Length = 619
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q E G+ V + ++ + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQHAESLGLRISDAQVRSMILAMPEFQQDGKFNQDVYQATLRRAGY 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ +++++ + E +P + + +RTV +I D
Sbjct: 148 SPDSFAEYMR-----RELIRSQLLDALQTSEFTLPGEVDAEGKLFTQTRDVRTVTLNIRD 202
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK 214
+ + K +E++ R +
Sbjct: 203 FADKVTLTEEDIQKYYDENKSRFTR 227
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 70/230 (30%), Gaps = 17/230 (7%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E + T D TV A L+ ED + D+ + + + I
Sbjct: 183 EGKLFTQTRDVRTVTLNIRDFADKVTLTEEDIQKYYDENKSRF-TRPEQVKVSYIELAAD 241
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + E++ + K + + + +L + +Q Q + +
Sbjct: 242 SLKQQITISDDEVKQYYQEHLDKYSSEEQRRVAHILI-----EGDDQAKAQAILDELNAG 296
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKG 266
K + F S + G+ ++ + P F+ + + T + G
Sbjct: 297 ADFATLAQEKSDDFGSADNG---GELGWIERDVMDPAFEEAAFALKNVGDVTGLVKSDFG 353
Query: 267 VEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
I + + ++ ++A + + + K E +L A
Sbjct: 354 YHIIKLEELKEPVVKPFSDVAAQ--IKQEMIDQKAVDQFYELQSELEKVA 401
>gi|189220090|ref|YP_001940730.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum
infernorum V4]
gi|189186948|gb|ACD84133.1| Parvulin-like peptidyl-prolyl isomerase [Methylacidiphilum
infernorum V4]
Length = 283
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 99/289 (34%), Gaps = 44/289 (15%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQE 89
+ S S ++ +NG I + + + K + + + A+ L+ + + QE
Sbjct: 29 LYSQGDLVESDQLLAIVNGVEIRKSYVLAELKKAGIVKPDSQAIQNALASLVQQEILYQE 88
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K + + + R + + + + + Q ++
Sbjct: 89 AMKLEMEKS-KELLRAQEEFNRKA------LTELVVQ---------KKIRSQPPSEGELR 132
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ Q +K++ EY IR ++ L+ V +R+K E
Sbjct: 133 LRYS--------------QLLKSLPKEEYKIRHIVLPTRRKALE----VMERLKKGENFS 174
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVE 268
L +E + D G+ + ++ L +L++K P ++ G E
Sbjct: 175 L------LAMESLEKQTAD-RGGELGWQNKATLVLSAYSLIQKLKPGQVGGPILSSMGWE 227
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
I + R L + L Q +++ +YV++L +++ + +
Sbjct: 228 LIELLAVRPL--RVPSYEELKPQLIQQIEQENLKKYVQELIASSRVQIF 274
>gi|16127297|ref|NP_421861.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter
crescentus CB15]
gi|13424717|gb|AAK25029.1| peptidyl-prolyl cis-trans isomerase family protein [Caulobacter
crescentus CB15]
Length = 314
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 49/305 (16%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGE 71
++I C V+ K +NG+VI D+ + L I+ E
Sbjct: 8 ACALMIASCGQNKVAEKPPEPGDTAVARVNGQVIWASDVKREAVAQGLISEGEPLDISSE 67
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + + E+I + L E K + D A+
Sbjct: 68 VFRQRLDEVIDQKLLAAEAVKRKLDKDP---------LAQR-----------------RL 101
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
++ + + VV+ + ++ A +QK+ + E R +L ++
Sbjct: 102 AAARERILGDMLVEGVVEKAVTE---DAIRKLYAEQQKLSKRS-EEIRARQILV---GSQ 154
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ + + A L + + ++ +F + G Y + + LK
Sbjct: 155 AEAESIKKLLATGASFDALAMERSTDQATRF-------NGGDLGYFTLDVMPEAYGAALK 207
Query: 252 KSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+Q P+ + G + + DKR I L+A Q + ++KLR
Sbjct: 208 DAQKGALIGPFAAEGGWVLVKVEDKR-TEEPITLEAA-RPQIIRFLTYDQVRDILEKLRG 265
Query: 311 NAIIH 315
+A +
Sbjct: 266 SAKVE 270
>gi|319762261|ref|YP_004126198.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans BC]
gi|330825811|ref|YP_004389114.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans K601]
gi|317116822|gb|ADU99310.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans BC]
gi|329311183|gb|AEB85598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans K601]
Length = 261
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 84/240 (35%), Gaps = 26/240 (10%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYL--A 139
E LK+Q +E++G N + E F K+G+ G +K + A
Sbjct: 41 EALKQQ-VERAGRPVTPEMENQIKEEVVAR-----EIFMQEAQKRGLEGTADYKTQMELA 94
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q+I + DF + EI A K + +EY +L
Sbjct: 95 RQTILIRELFVDFQKNNPVTDAEIQAEYDKFVAANAGKEYKASHILV-----------AK 143
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQF-QNLLKKSQNN 256
+ K S + K + +K + G + P+F + L+K +
Sbjct: 144 EDEAKSIIASIKKGAKFEDIAKKQSKDPGSGARGGDLDWANPGSYVPEFTEALVKLEKGK 203
Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T P +Q G I + D RD ++ + Q ++ A++ + LR+ A +
Sbjct: 204 MTQTPVKSQFGWHVIRLDDVRD--AQLPKLDEVKPQIAQQLQQQKLAKFQEDLRAKAKVE 261
>gi|172064761|ref|YP_001812411.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
gi|171998246|gb|ACB69162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
Length = 282
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 84/308 (27%), Gaps = 47/308 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
+ L I C+ + S + T+NG IT ++ + + Q ++ +
Sbjct: 12 ASALYLGIACVAQAQTPASSTSPVGVVATVNGTAITQAEVDTVLRASR-QPDTPQVRQAI 70
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK- 135
+LI L +Q EK+ V Q A+ + + + + D K
Sbjct: 71 KNQLIARVLIQQAAEKANYG-SKPEVQTAM-QVAKANAETQLYLKDNVKPEPVTDAQIKA 128
Query: 136 --QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK--NITVREYLIRTVLFSIPDNK 191
+ + ++K + A + K + R+Y I
Sbjct: 129 RYDEIVASLGKDEYKPRLIVVKDAATAATVLAELKAGKPFDGLARQYSIAP--------- 179
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
R E + + + + L L
Sbjct: 180 --------SRDAGGELPWVSFKTPAAEGKT------------------AGLPVAIAQALD 213
Query: 252 KSQNNTTNPY--VTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKK 307
K P + + KR +A + Q +EK A++V
Sbjct: 214 KLPVGAVTPESIAVDNARAIVKLDAKRPTQVPTFNQAQATIHQQLEALALEKASAQFVGG 273
Query: 308 LRSNAIIH 315
L NA I
Sbjct: 274 LLKNATIQ 281
>gi|85058653|ref|YP_454355.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Sodalis
glossinidius str. 'morsitans']
gi|84779173|dbj|BAE73950.1| peptidyl-prolyl cis-trans isomerase D [Sodalis glossinidius str.
'morsitans']
Length = 617
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 16/124 (12%)
Query: 43 RTTINGEVITDGDISKRIA-------------LLKLQKINGELEKIAVQELIVETLKKQE 89
+NG+ I+ + + + +L G + + + +LI ETL Q
Sbjct: 42 AAKVNGQQISRSQLEQAVQNERNRQQEAMGEQFSQLAANEGYMRQQVLSQLIDETLLDQY 101
Query: 90 IEKSGITFDSNTVNYF-FVQHARNT--GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+K G+ + + F A T F S + G+ + + + Q +
Sbjct: 102 ADKLGLAISDDQIKQAIFAILAFRTEDKFDNAKFRSLIGNMGLSPDQYATLMRKQLLTQQ 161
Query: 147 VVKN 150
+++
Sbjct: 162 LIQG 165
>gi|260366277|ref|ZP_05778733.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
K5030]
gi|308114046|gb|EFO51586.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
K5030]
Length = 555
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 8/134 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + +I + L Q+ E G+ V ++ + + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDAQVRSMILEMPQFQSNGQFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + + E +P Q + + IRTV + +
Sbjct: 148 SPDSFAEYMR-----RELVREQLLTALQSSEFTLPGEVQSQGKLFTQTRDIRTVTIDLAE 202
Query: 190 NKLQNQGFVQKRIK 203
+ + ++
Sbjct: 203 FAKKVELTDEEIQA 216
>gi|320156965|ref|YP_004189344.1| peptidyl-prolyl cis-trans isomerase ppiD [Vibrio vulnificus
MO6-24/O]
gi|319932277|gb|ADV87141.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio vulnificus
MO6-24/O]
Length = 619
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q E G+ V + ++ + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQHAESLGLRISDAQVRSMILAMPEFQQDGKFNQDVYQATLRRAGY 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ +++++ + E +P + + +RTV +I D
Sbjct: 148 SPDSFAEYMR-----RELIRSQLLDALQTSEFTLPGEVDAEGKLFTQTRDVRTVTLNIRD 202
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK 214
+ + K +E++ R +
Sbjct: 203 FADKVTLTEEDIQKYYDENKSRFTR 227
Score = 36.6 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 70/230 (30%), Gaps = 17/230 (7%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E + T D TV A L+ ED + D+ + + + I
Sbjct: 183 EGKLFTQTRDVRTVTLNIRDFADKVTLTEEDIQKYYDENKSRF-TRPEQVKVSYIELAAD 241
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + E++ + K + + + +L + +Q Q + +
Sbjct: 242 SLKQQITISDDEVKQYYQEHLDKYSSEEQRRVAHILI-----EGDDQAKAQAILDELNAG 296
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKG 266
K + F S + G+ ++ + P F+ + + T + G
Sbjct: 297 ADFAALAQEKSDDFGSADNG---GELGWIERDVMDPAFEEAAFALKNVGDVTGLVKSDFG 353
Query: 267 VEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
I + + ++ ++A + + + K E +L A
Sbjct: 354 YHIIKLEELKEPVVKPFSDVAAQ--IKQEMIDQKAVDQFYELQSELEKVA 401
>gi|71907562|ref|YP_285149.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas
aromatica RCB]
gi|71847183|gb|AAZ46679.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dechloromonas
aromatica RCB]
Length = 628
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 18/192 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLII--FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RI 60
+F ++ + +++ + LI F + SY A S +I IT + R
Sbjct: 1 MFDAVRNNKRIVQVFLALITLPFAFFGVDSYMRSAGSGGDVASIGDIKITQQQFQQTLRE 60
Query: 61 ALLKLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FF 106
+L+ G E + + +LI + L E K ++ ++ +
Sbjct: 61 QQERLRTQLGAQFDAKMLDNPEARRAILDDLINQRLLLVEASKKHMSVSNDAIRQTIGAI 120
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ S E + + L QG+ F+ L + +
Sbjct: 121 EAFKVDGKFSTERYEAALRAQGMSPTGFEAQLRQDLTLQQLASAVGQSGLVARSVSDRLL 180
Query: 167 KQKMKNITVREY 178
+ + V EY
Sbjct: 181 SLQTEKREVMEY 192
>gi|86130561|ref|ZP_01049161.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134]
gi|85819236|gb|EAQ40395.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134]
Length = 643
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 84/293 (28%), Gaps = 51/293 (17%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQE 79
+F + + + S + +N + +T D K +AL+ + +
Sbjct: 4 LFIVCFFMPFVSLGQ-QEVLLKVNNDEVTTADFVRVYEKNLALI--NDTEENSPEQYLDL 60
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I LK QE + G+ +K+ +A
Sbjct: 61 FIDYKLKVQEAYRKGLH---------------------------------NKASYKKEIA 87
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + D++ + + + KN E R +L + + L
Sbjct: 88 ---SYRTQLGKDYLNDVQVTDKLVEEAYNRTKN----ELRARHILVRVRPDALPKDTLAA 140
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
R+ +D + S+ + G + + F+N ++ N
Sbjct: 141 FNKLLEARKRIVAGEDFAFIASKYSEDPSAKQNGGDLGWFKAFKMVYPFENAAYTTKVNE 200
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ P+ T G + R G A++ E +K++R
Sbjct: 201 VSQPFRTSFGYHIVQPTASRIAQG-SVQVAHIMIALKQKDSSIIAEEKIKEVR 252
>gi|84387739|ref|ZP_00990755.1| peptidyl-prolyl cis-trans isomerse D [Vibrio splendidus 12B01]
gi|84377422|gb|EAP94289.1| peptidyl-prolyl cis-trans isomerse D [Vibrio splendidus 12B01]
Length = 621
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 56/162 (34%), Gaps = 15/162 (9%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FLDKQ 127
K + +I + L +Q+ E G+ + + ++ + +A F L +
Sbjct: 88 RKSVLDRMINDVLLEQQAESLGLRISDSQIRTMILEMPQ--FQTAGQFDQEVYQSALRRA 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G F +Y+ D+++N + E + + + IRTV S+
Sbjct: 146 GFSAESFAEYMR-----RDLMRNQLVTALQGSEFVLQGEIDTQSKLIAQTRDIRTVTLSV 200
Query: 188 PD---NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
D +++ + ++ R + + +++
Sbjct: 201 ADLAKGIELTDEQIEQYYSENPQAYTRPEQAKVSYIELSAEA 242
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 67/238 (28%), Gaps = 22/238 (9%)
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I K + D TV A+ L+ E + + + +
Sbjct: 180 IDTQSKLIAQTR-----DIRTVTLSVADLAKGIELTDEQIEQYYSE---NPQAYTRPEQA 231
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + ++ + + E Q+ K T + + +L + ++
Sbjct: 232 KVSYIELSAEALKSQLEVSDEEAQKYYQEHLDKYSTEEQRKVSHILV-----QGDDEAKA 286
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NN 256
Q + + K + F S G ++ + P F++ + +
Sbjct: 287 QSILDELNAGADFATLAEEKSDDFGSAD---VGGDLGWIERDVMDPAFEDAAFALENIGD 343
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
TT + G I + + + + + A + + E +L A
Sbjct: 344 TTGLVKSDFGYHIIKLDEVKASQAQPYTEVAAEIKQELLDQHAVDQFYEQQTELEKVA 401
>gi|86148518|ref|ZP_01066806.1| peptidyl-prolyl cis-trans isomerse D [Vibrio sp. MED222]
gi|85833709|gb|EAQ51879.1| peptidyl-prolyl cis-trans isomerse D [Vibrio sp. MED222]
Length = 621
Score = 52.7 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 56/162 (34%), Gaps = 15/162 (9%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FLDKQ 127
K + +I + L +Q+ E G+ + + ++ + +A F L +
Sbjct: 88 RKSVLDRMINDVLLEQQAESLGLRISDSQIRTMILEMPQ--FQTAGQFDQEVYQSALRRA 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G F +Y+ D+++N + E + + + IRTV S+
Sbjct: 146 GFSAESFAEYMR-----RDLMRNQLVTALQGSEFVLQGEIDIQSKLIAQTRDIRTVTLSV 200
Query: 188 PD---NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
D N ++ ++ + R + + +++
Sbjct: 201 ADLAKNIELTDEQIELYYQENPAAYTRPEQAKVSYIELSAEA 242
>gi|295111546|emb|CBL28296.1| SurA N-terminal domain. [Synergistetes bacterium SGP1]
Length = 368
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 85/289 (29%), Gaps = 29/289 (10%)
Query: 43 RTTINGEVITDGDISKRIALL----KLQKING----ELEKIAVQELIVETLKKQEIEKSG 94
++G + ++ R+ L+ + + + + ++E + E++K+
Sbjct: 50 VAAVDGRPLMRSELENRLRAYLENSGLRNAASLDLPAVYQAVLDQYVLERQLESEVKKAD 109
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I +A + + E F + L++QGI +K+ LA Q ++
Sbjct: 110 IAISDADAEQAMKAYADSAFPTREAFYAALERQGISSAEYKKSLARQLAVQQLLHMAVGD 169
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E +K+ LF P DAE R +L
Sbjct: 170 -VTVSEDEAVKFYDSIKD----------QLFRTPAGVNLQVARFGA-SADAEALRAKLQA 217
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ------FQNLLKKSQNNTTNPYVTQKGVE 268
+ ++ + + L L + + G
Sbjct: 218 GTDWVQATSGDALASMDVLSVTREPLFLPESAFESGVLAELASLDVGAVSPVFSPASGDF 277
Query: 269 YIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAEYVKKLRSNAII 314
+A+ +R + + A + + +Y L + A +
Sbjct: 278 SVAVKTERVSESVRPYEDVSSDVRAFLRSQEERRKLNDYEAALMAKAEV 326
>gi|261749107|ref|YP_003256792.1| putative exported peptidyl-prolyl cis-trans isomerase
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497199|gb|ACX83649.1| putative exported peptidyl-prolyl cis-trans isomerase
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 421
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 107/316 (33%), Gaps = 37/316 (11%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQK 67
+ F KL F +++ I+ + + S+ + I E++ D ++ L
Sbjct: 3 NIFFKLKQECFFILLMLIIFCIPFPSFTFEKIGGMTAVIGDEILLDSEVKH-----YLNS 57
Query: 68 INGELEKIAVQELIVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ LI+ L +K + D+ + + ++F+S K
Sbjct: 58 NKKITPCKGLENLIIHKLILYHAKKDPSLQIDNQEIQSKKEEF-------LKEFNSNFSK 110
Query: 127 QGIGDNHFKQYLAI-QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVL 184
+ + Q I K ++ E++ NK+K K I ++ + ++
Sbjct: 111 -NFSLEELTEKIKNNQYIEKFYQKMKEDIEISPEEVKYFFNKEKEKLPIIPKKICVSYMI 169
Query: 185 FSIPDNKLQNQ---GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
S +K + F++K K+ + K E ++S I + +
Sbjct: 170 LSPKFSKEHREKIVNFLKKIKKEIHSDKDFSMKAILLSEDYSSAFKGGLINGVKKK---N 226
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ +F+ ++ + + P+ T G + + KR + + K +
Sbjct: 227 ISKEFERIVFSLEEKQISEPFETDLGFHLVKLEKKRGEEID------IRHILIQPKYTE- 279
Query: 301 EAEYVKKLRSNAIIHY 316
++LR Y
Sbjct: 280 -----EELRKAKSFAY 290
>gi|212550918|ref|YP_002309235.1| peptidyl-prolyl cis-trans isomerase SurA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549156|dbj|BAG83824.1| peptidyl-prolyl cis-trans isomerase SurA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 480
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/321 (14%), Positives = 114/321 (35%), Gaps = 42/321 (13%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIAL-LKLQKINGE 71
K + + VL + I + + + TI EVI D+ R+ + + Q I G+
Sbjct: 26 KFIHSIIVLTLVSSGLINAQSNV--IDEVVWTIGNEVILRSDVENVRLQMQINNQYIEGD 83
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG--- 128
+ ++L ++ L ++ + I + V+ ++ + +D+ G
Sbjct: 84 PYCVIPEQLAIQKLYLRQAKLDSINIPESQVSQ----------MTESWINHLIDQIGSKE 133
Query: 129 -----------IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP----ANKQKMKNI 173
+ KQ + Q ++N + +I Q
Sbjct: 134 KVEEYCGKPISVLREEKKQAIREQ-GMIQAMQNKLVSGVKVTPSDIRNFYNQIPQDSLPF 192
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--I 231
+ + P L+ +++++K+ E K+ + L + S+ + +
Sbjct: 193 IPTTVEVEIITLK-PLVTLEEINNIKQKLKEYIELVTSGQKEFSTLARLYSEDINSAMKG 251
Query: 232 GKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G+ ++ +S L P+F + + + T+ G I + +K+ G+ ++
Sbjct: 252 GELNFVCKSSLSPEFAAVAFELSNPKKVSRIVETEYGYHIIQLIEKK---GDRINVRHIL 308
Query: 290 AQNTPTKIEKHEAEY-VKKLR 309
+ TK E + Y + +R
Sbjct: 309 LKPHATKEELAKVSYRLDSIR 329
>gi|83745917|ref|ZP_00942974.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551]
gi|207743054|ref|YP_002259446.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum
IPO1609]
gi|83727607|gb|EAP74728.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia solanacearum UW551]
gi|206594451|emb|CAQ61378.1| peptidyl-prolyl cis-trans isomerase protein [Ralstonia solanacearum
IPO1609]
Length = 648
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/400 (12%), Positives = 105/400 (26%), Gaps = 106/400 (26%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKL 65
+ L+ V F + Y + S + VIT ++ R+ L ++
Sbjct: 10 RLMFLVLLILVFPSFVFFGVQGYSRFMDGSHDAAKVGDTVITTSELDARVREQTERLRQM 69
Query: 66 QKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-- 115
+ + + +I + + E ++ ++ V Q L
Sbjct: 70 LGGQYDPRQFEGPQMRRDVLDGIIQQRMMVNEASRTNLSVADTKVRETIEQIPAVAQLRK 129
Query: 116 -----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFML--------KYGN 158
+ + L QG+ F L + + +V + F+ + +
Sbjct: 130 PDGKFDTDAYIKLLAAQGMTPEQFDARLRSELVLQQIPQSIVSSAFVPKSLVDRLIEARD 189
Query: 159 LEMEIPANKQKMKNITVRE----------YLIRTVLFSIPDNKLQN-------------- 194
+ E+ A K + + Y F++P+
Sbjct: 190 QQREVQALLLKPADYASKVAVDDKAIQAYYDAHQQEFAVPEQVKAEYVVFSGEDMMKQIP 249
Query: 195 -------------------------------------QGFVQKRIKDAEESRLRLPKDCN 217
K AEE + K
Sbjct: 250 VTPEQLKEYYDQNAARFKTEEQRRAAHILIKLPDNAKPADKDAAKKRAEEVLAEVRKTPG 309
Query: 218 KLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
+ A K + G+ +L + PQF++ L K + ++ + G I
Sbjct: 310 NFAELAKKYSEDPGSAAQGGELGFLAKGATVPQFESALFALKQPGDISDVVQSDFGFHVI 369
Query: 271 AICDKRDLGGEIA------LKAYLSAQNTPTKIEKHEAEY 304
+ + + G + L+ + Q K + +
Sbjct: 370 KLEEVKGGGVQSLEAVKPELEREVRTQLANKKYTELADAF 409
>gi|148558977|ref|YP_001259765.1| peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC 25840]
gi|148370234|gb|ABQ60213.1| peptidyl-prolyl cis-trans isomerase [Brucella ovis ATCC 25840]
Length = 331
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 50/283 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGIT 96
S++ TING+ IT G++ + L Q +E+ A+ LI E EK +
Sbjct: 61 SKVLATINGKDITVGEVDQAAGDLDPQFARLPVEQRRLAALAALIDIKAMAGEAEKDKLD 120
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++F ++ +L +++ + KN + K
Sbjct: 121 -------------------QTKEFKDRME-----------FLRERALHNEYFKNAIVDKI 150
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++ +K+ E R +L + +A +L
Sbjct: 151 SDADVRARYDKEIAAMPPQVEVRARHILVKTKEE------------AEAIIKKLEGGAKF 198
Query: 217 NKLEKFASKI-HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAIC 273
L K +S S G Y E + P+F+ T P TQ G I +
Sbjct: 199 EDLAKASSTDGTASSGGDLGYFSEGQMVPEFEKAAFALKPGEYTKEPVQTQFGYHVIQLE 258
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D+R + Q + + E VKKLR I Y
Sbjct: 259 DRRTKQ--PPAYDQVKDQIRSIIMRERYIETVKKLRDGLKIDY 299
>gi|85705703|ref|ZP_01036800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp. 217]
gi|85669693|gb|EAQ24557.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp. 217]
Length = 304
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 85/304 (27%), Gaps = 51/304 (16%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD-ISKRIALLKL--QKING 70
L +T ++ + + + + T+ G IT G ++ R AL + Q
Sbjct: 25 TLFSTTILVTGLALTSPATAQDTPSPETVMATVGGTDITLGHMLAVRAALPEQFDQTPPD 84
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L +++LI + L Q V+ N
Sbjct: 85 ALFSGVLEQLIQQELLVQA--------HDGEVSRAAALRLENER---------------- 120
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ LA VV D + + Q+ + EY +L
Sbjct: 121 ----RAVLAADVA-EGVVNADMTEERLQAAYDAQYAGQEDQ----TEYKAAHILV----- 166
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HPQFQNL 249
+ + QK + + E ++ ++ S G + + + F +
Sbjct: 167 --ETEEEAQKLVAELEGGA----NFAALAQEHSTGPSGPSGGDLGWFGDGVMVPEFFAAV 220
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + P TQ G I + + R E + T ++ + R
Sbjct: 221 AALEVGDVSAPLQTQFGWHVIQLNETR--VKERPTLDAVREDLANTLRRDAFNAFMTE-R 277
Query: 310 SNAI 313
A
Sbjct: 278 EAAT 281
>gi|227889497|ref|ZP_04007302.1| peptidylprolyl isomerase [Lactobacillus johnsonii ATCC 33200]
gi|227849975|gb|EEJ60061.1| peptidylprolyl isomerase [Lactobacillus johnsonii ATCC 33200]
Length = 298
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 86/288 (29%), Gaps = 41/288 (14%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ I + + T G IT+ ++ + Q L + +
Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYDKMK--ESQAGQSTLASM----I 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + L+ Q G V+ + ++ + G F S L++ G+ + FK L
Sbjct: 62 VSDALESQ----YGKDVTQKQVDKEYNKYKKQYG---SQFDSVLEQNGMTASTFKDNLKT 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ PA ++K E ++ +L +K V K
Sbjct: 115 NLL--------TEAALKHIKKITPAQEKKAWKSYQPEITVQHILV----SKKSTAEDVIK 162
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
+++D + K K + +D A +S L F+ K T
Sbjct: 163 QLQDGGD----FKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGEITT 218
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QNTPTKIEKHEAE 303
P TQ G I + K Q + +
Sbjct: 219 TPVKTQYGYHVIKMIK-------HPAKGTFKEHKKQIDNQIYQSMSED 259
>gi|83816153|ref|YP_445540.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855]
gi|83757547|gb|ABC45660.1| peptidylprolyl cis-trans isomerase [Salinibacter ruber DSM 13855]
Length = 691
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/336 (10%), Positives = 94/336 (27%), Gaps = 59/336 (17%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----------KINGELEKIAVQELI 81
+ + ++R T+NG I + D + + + + ++ + + A +++
Sbjct: 34 FSAMNQTNRNVATVNGNPIQNEDYQRILKRQRQRFQQQMGGDMNPQMESRVRERAYNQVV 93
Query: 82 VETLKKQEIEKSGITFDSNTVNYFF----------VQHARNTGLSAEDFSSFLDK----- 126
+ L +QE+++ GI+ + V Q A +TG +
Sbjct: 94 NQELLQQEMKRLGISVTDSEVEAMVFGENPHPVIRRQFADSTGQINYQLLQNMASNPEAR 153
Query: 127 -QGIGDNHFKQYLAIQSIWPDVVK--------------NDFMLKYGNLEMEIPANKQKMK 171
Q I F + Q +V+ + + +
Sbjct: 154 TQWIKLEEFLRRQRRQQKMSSLVQSTIQVSEADIKDYYRRQNSSASAQYVALRYARVSDD 213
Query: 172 NITVREYLIR------------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ITV E +R ++ + + A +
Sbjct: 214 SITVTESDLRDYYDNNREAYKREKTVTLQYATTSKEATAEDSSGIAGDLAGLRADFATTE 273
Query: 220 EKFASKIHDVSIGK--AQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDK 275
+++ S + Y ++ + + + S P + + D
Sbjct: 274 NDSLFLLNNASDQDFSSAYRTPDQMNARVADSVYASPEPGRIVGPVFGGGQAHLLKVRDT 333
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
R + ++ + E ++ +R +
Sbjct: 334 RPAENDFLHARHILLKTDQADSEVAGR--LRAIRDS 367
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 37/161 (22%), Gaps = 9/161 (5%)
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
S +DFSS + + S++ + + +
Sbjct: 281 NNASDQDFSSAYR----TPDQMNARV-ADSVYASPEPGRIVGPVFGGGQAHLLKVRDTRP 335
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
R +L + G ++ E +++ G
Sbjct: 336 AENDFLHARHILLKTDQADSEVAGRLRAIRDSLEAGAASF---AEMARRYSDDGSASDGG 392
Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272
+ + F++ P ++ G I +
Sbjct: 393 DLGWFARGSMVDAFEDAAFGAEPGTLVGPVRSEFGYHLIRV 433
>gi|42519550|ref|NP_965480.1| peptidylprolyl isomerase [Lactobacillus johnsonii NCC 533]
gi|46396699|sp|P60750|PRSA1_LACJO RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|41583839|gb|AAS09446.1| protease maturation protein precursor [Lactobacillus johnsonii NCC
533]
gi|329667789|gb|AEB93737.1| protease maturation protein precursor [Lactobacillus johnsonii DPC
6026]
Length = 298
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 86/288 (29%), Gaps = 41/288 (14%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ I + + T G IT+ ++ + Q L + +
Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYDKMK--ESQAGQSTLASM----I 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + L+ Q G V+ + ++ + G F S L++ G+ + FK L
Sbjct: 62 VSDALESQ----YGKDVTQKQVDKEYNKYKKQYG---SQFDSVLEQNGMTASTFKDNLKT 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ PA ++K E ++ +L +K V K
Sbjct: 115 NLL--------TEAALKHIKKITPAQEKKAWKNYQPEVTVQHILV----SKKSTAEDVIK 162
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
+++D + K K + +D A +S L F+ K T
Sbjct: 163 QLQDGGD----FKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGEITT 218
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QNTPTKIEKHEAE 303
P TQ G I + K Q + +
Sbjct: 219 TPVKTQYGYHVIKMIK-------HPAKGTFKEHKKQIDNQIYQSMSED 259
>gi|330910235|gb|EGH38745.1| peptidyl-prolyl cis-trans isomerase ppiD [Escherichia coli AA86]
Length = 623
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/333 (12%), Positives = 90/333 (27%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + V + G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHF-----KQYLAIQSIWPDVVKNDF------------------------ 152
G+ F LA VV+
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVAQQRVVREAAIDVNALAAKQPVTEQEIASYYEQN 221
Query: 153 --------MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ +Q + + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I + G +L ++ + + +N K +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLAGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D + ++ +IA K
Sbjct: 342 IKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAK 374
>gi|330684763|gb|EGG96458.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis VCU121]
Length = 330
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 33/254 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+ + + +I + IA+ +++ + K + D+ ++ + + G
Sbjct: 43 VEDVMKKIGKDQIASKSFSIALDKILADKYKDK--------VDTKDIDKDIKKEEKQYGG 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
E F S L +QG+ + +K + + +++ K + EI K K +
Sbjct: 95 K-EQFESVLKQQGMSMDDYKDQKRLSAYQKELLN----DKIKVSDKEI---KDNTKKAS- 145
Query: 176 REYLIRTVLFSIPDNKLQNQGFV-QKRIKDAEESRLRLPKDCNKLEKFAS-----KIHDV 229
+L + +G +K + AEE + + KD +K + A K
Sbjct: 146 ------HILIKVKSKDSDKEGLSDKKAKQKAEEIQKEVSKDPSKFGEIAKKESMDKSSAK 199
Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G Y+ + + F + L K + + T G I + D E K+ L
Sbjct: 200 KDGSLGYVTKGQMMESFDKALFKLKEGEVSKVVKTDYGYHIIKADKETDFNSE---KSNL 256
Query: 289 SAQNTPTKIEKHEA 302
++ KI+K
Sbjct: 257 KSKILEQKIQKDPK 270
>gi|269961041|ref|ZP_06175410.1| peptidyl-prolyl cis-trans isomerse D [Vibrio harveyi 1DA3]
gi|269834260|gb|EEZ88350.1| peptidyl-prolyl cis-trans isomerse D [Vibrio harveyi 1DA3]
Length = 619
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 46/133 (34%), Gaps = 8/133 (6%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + +I + L Q+ E G+ V + + + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDAQVRSMILDMPQFQSNGQFDQDIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + E +P Q + + +RT+ + +
Sbjct: 148 SPDSFAEYMR-----RELVREQLLNALQTSEFTLPGEVQAEGKLFTQTRDVRTITIDLNE 202
Query: 190 NKLQNQGFVQKRI 202
+ ++
Sbjct: 203 FAKKVDLTDEEIQ 215
>gi|256847527|ref|ZP_05552973.1| peptidylprolyl isomerase [Lactobacillus coleohominis 101-4-CHN]
gi|256716191|gb|EEU31166.1| peptidylprolyl isomerase [Lactobacillus coleohominis 101-4-CHN]
Length = 307
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 78/270 (28%), Gaps = 24/270 (8%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92
A ++ T +G IT + + N K +Q++I++ + + ++
Sbjct: 2 MPLAACGNKAVATTSGGKITQDEYYSSMK-------NTSQGKAVLQQMILDKVLQ---KQ 51
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G VN + + G S FS+ L +Q + + FK + +
Sbjct: 52 YGKEVSKADVNKEYNSYKSQYGSS---FSAVLQQQNLTEKTFKDQIK----------SRL 98
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+L+ +NK K E + T + Q + +
Sbjct: 99 LLEAAVRHYSTFSNKAINKQWKKYEPKVETAEILVGSEDDAKDIISQLDSTSGNKYKKFK 158
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIA 271
+K ++K + S + T P T G + I
Sbjct: 159 KLAKSKSTDTSNKSTGGIVPAFDNTSTSVDSAYKKAAFALKTGEYTKEPVKTDNGYQVIY 218
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ G + A A L + +
Sbjct: 219 MVKHPAKGAKSAHIADLKTKIVQQNMNNQS 248
>gi|296445269|ref|ZP_06887228.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus
trichosporium OB3b]
gi|296257224|gb|EFH04292.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylosinus
trichosporium OB3b]
Length = 335
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 86/282 (30%), Gaps = 37/282 (13%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-----IAVQELIVETLKKQEIEK 92
S + + IT + + L ++ ++ AV+ ++ E + QE
Sbjct: 64 TSDDVVAHVGATDITTSQLRAYVEALGAREQAAIAKEPGLLSQAVRAMLNERVVLQEALA 123
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
V Q + S+L + +
Sbjct: 124 KKWDQQPK-VAAQLEQLRERALV-----ESYLQSVSVPPADY------------------ 159
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
E++ + + + R++ + + P + + K+ + + +L+
Sbjct: 160 ---PSEEELQKAYDANRSSFVVPRQFQLGHIFVQSPKDADRATEDKAKKTLEDIQRKLKS 216
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271
D + K S+ D G+ +L E + P+ + ++ + + P G ++
Sbjct: 217 GADFAAVAKAQSEAKD--GGELGWLAEGQIRPEIRTRVMGLVKGAVSEPIQLDDGWHFVK 274
Query: 272 ICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRSN 311
+ D + +A L+ Q + YV +L
Sbjct: 275 LIDTKASTTRPLAEAREQLAQQMRVERAGLLRRAYVAELVKR 316
>gi|218897287|ref|YP_002445698.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus G9842]
gi|228900906|ref|ZP_04065121.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
gi|218542209|gb|ACK94603.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus G9842]
gi|228858832|gb|EEN03277.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
Length = 293
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K IK+ ++ +
Sbjct: 131 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + ++E ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDLEQQRLEDTTGKWKQQVVNDLLKDANI 276
>gi|134094865|ref|YP_001099940.1| putative peptidyl-prolyl cis-trans isomerase (NifM related)
[Herminiimonas arsenicoxydans]
gi|133738768|emb|CAL61815.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Herminiimonas arsenicoxydans]
Length = 248
Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 51/278 (18%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
++NG I D I + L + G K +V EL++ T+ E ++ GI
Sbjct: 3 VSVNGIEIPDAAIEQ---ELPHHQHAGNPLKQSVHELVLRTVLLHEADRLGI-------- 51
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
G GD+ I++++ V+ +
Sbjct: 52 -----------------------AGAGDDG-----RIEALFAQEVR---VPDADEAACAT 80
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + R +LF + + + E R+ + +++
Sbjct: 81 FYRNQPQRFTSGELVEARHILFQVTPSVPLE-LLRETGEAVLAELRVHPERFAELAREYS 139
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGE 281
+ G L P+F+ L+ + + + T+ G+ + + R + GE
Sbjct: 140 NCASGTVGGNLGQLTRGQTVPEFEALVFRLPEGELADRLLETRFGLHIVQV--LRRVAGE 197
Query: 282 I----ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A+KA ++ + ++ +Y++ L A I
Sbjct: 198 VVPLEAVKAQIADHLSRQAWQRAVHQYLQILVGRADIQ 235
>gi|298528165|ref|ZP_07015569.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511817|gb|EFI35719.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 312
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 108/312 (34%), Gaps = 35/312 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA---LLKLQKINGELEKI 75
+ ++F V + + T+NG+ I ++ + + +L++I
Sbjct: 6 FVTALVFLAVLAWGCSPDSPEEGVVATVNGQPIYLDEVESGYDADYFKWSRGVPPDLKEI 65
Query: 76 ------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQ 127
+ +L+V+ L +QE+ SG D V + R D F L ++
Sbjct: 66 KSSYGRVLLDLVVQKLIEQELNSSGHAVDPGEV----AKIEREIRQDYPDGGFEEVLIEE 121
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL-FS 186
I ++ + +W K + ++ +EY + F
Sbjct: 122 HIDLEFWRASILKDLMWDKFKKEVLRPRISLDVEDV------------KEYYHYHIEDFY 169
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
IP+ + +D + L ++ + + K V++G+ + ++ L
Sbjct: 170 IPE--RIVFLHLSSGKEDKLQEVLDTFQESEDISRIREKYPQVNVGEYEMRVD-RLPLGL 226
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEA 302
Q+ L + + ++G+ Y + + D++D + Y + K+ K
Sbjct: 227 QDELTGLQKGEKSQIQKNRQGLYYRVMVMDRKDSKLLKPHQVYDIIEENLVQEKMHKVFY 286
Query: 303 EYVKKLRSNAII 314
+++ + I
Sbjct: 287 NWLETTVDESDI 298
>gi|88811164|ref|ZP_01126420.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis
Nb-231]
gi|88791703|gb|EAR22814.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis
Nb-231]
Length = 250
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 71/234 (30%), Gaps = 24/234 (10%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-FLDKQGIGDNHFK 135
++EL+ E L +++GI + F Q R GL + FL + G+ + F+
Sbjct: 30 IEELVSEKLTVHAAKRAGINITLEEIQERFDQIRRVEGLHRAKDTQEFLQQLGVSLDDFE 89
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
Y++ + K + + E E I ++
Sbjct: 90 AYIS-----DTLYKEKMLEEVRRDEAIQEYFSLNSPKFEGIE--ISHIVVD--------- 133
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQF-QNLLKK 252
+ + ++ P +L + S D + G +L +L + +
Sbjct: 134 --SENKAREILSLAEEEPDMFAELAREHSLDDDTKHNGGLVGKVLRGELQDEIEAKVFNA 191
Query: 253 SQNNTTNPYVTQKG--VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
S P+ T E + + + + + +E E+
Sbjct: 192 SAGELLGPFQTPDELFYEIFKVEARHPAILDTETEKEVRRLVYRAWLEARAQEH 245
>gi|328473322|gb|EGF44170.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
10329]
Length = 619
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 8/134 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + +I + L Q+ E G+ V ++ + + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDAQVRSMILEMPQFQSNGQFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + + E +P Q + + IRTV + +
Sbjct: 148 SPDSFAEYMR-----RELVREQLLTALQSSEFTLPGEVQSQGKLFTQTRDIRTVTIDLAE 202
Query: 190 NKLQNQGFVQKRIK 203
+ + ++
Sbjct: 203 FAKKVELTDEEIQA 216
>gi|294775653|ref|ZP_06741161.1| putative D-tyrosyl-tRNA(Tyr) deacylase [Bacteroides vulgatus PC510]
gi|294450497|gb|EFG18989.1| putative D-tyrosyl-tRNA(Tyr) deacylase [Bacteroides vulgatus PC510]
Length = 452
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 93/284 (32%), Gaps = 36/284 (12%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEK 74
T + L++ + Y + + + E I D+ + A + +K +G+
Sbjct: 3 TKVYALMLMLFAVVSVYGQDNVIDEVVWVVGDEAILKSDVENERLNAQYEGRKFDGDPYC 62
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAEDF 120
I ++L ++ L + I + N+ Q + ++
Sbjct: 63 IIPEQLAIQKLFLHQAAIDSIEVSEQEIISDVERRTNWLIDQIGSKEKVEEYYNKTSTQI 122
Query: 121 SSFLD---KQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
L + G +Q + I P V+ F + IP
Sbjct: 123 REMLRENIRDGKTVQKMQQQIVGDIKITPAEVRRYFKDLPQDSIPFIP-----------T 171
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKA 234
+ ++ + P + V+K ++D E + L + S+ G+
Sbjct: 172 QVEVQIITME-PKIPQEEIERVKKTLRDYTERVTSGEIAFSTLARLYSEDEGSRRRGGEL 230
Query: 235 QYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
++ ++L P++ N+ + N + ++ G I + +KR
Sbjct: 231 GFMGRAELVPEYANVAFNLQDPNKVSKIVESEFGFHIIQLIEKR 274
>gi|42781422|ref|NP_978669.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987]
gi|42737344|gb|AAS41277.1| protein export protein prsA [Bacillus cereus ATCC 10987]
Length = 283
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G ++F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 121 --TVTEKDV-------KDNYKPELKVSHILVK--------DEKTAKEVKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 220 VTDKKELKPFDEVKDDIRKDLEQQRLQDTTGKWKQQVVNDLLKDADI 266
>gi|28897695|ref|NP_797300.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus RIMD
2210633]
gi|260878350|ref|ZP_05890705.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
AN-5034]
gi|260898294|ref|ZP_05906790.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
Peru-466]
gi|260901515|ref|ZP_05909910.1| SurA N-terminal domain protein [Vibrio parahaemolyticus AQ4037]
gi|28805908|dbj|BAC59184.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus RIMD
2210633]
gi|308088424|gb|EFO38119.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
Peru-466]
gi|308092760|gb|EFO42455.1| peptidyl-prolyl cis-trans isomerase D [Vibrio parahaemolyticus
AN-5034]
gi|308110873|gb|EFO48413.1| SurA N-terminal domain protein [Vibrio parahaemolyticus AQ4037]
Length = 619
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 8/134 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + +I + L Q+ E G+ V ++ + + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDAQVRSMILEMPQFQSNGQFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + + E +P Q + + IRTV + +
Sbjct: 148 SPDSFAEYMR-----RELVREQLLTALQSSEFTLPGEVQSQGKLFTQTRDIRTVTIDLAE 202
Query: 190 NKLQNQGFVQKRIK 203
+ + ++
Sbjct: 203 FAKKVELTDEEIQA 216
>gi|239826178|ref|YP_002948802.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
WCH70]
gi|259534743|sp|C5D6L9|PRSA_GEOSW RecName: Full=Foldase protein prsA; Flags: Precursor
gi|239806471|gb|ACS23536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
WCH70]
Length = 276
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 97/302 (32%), Gaps = 47/302 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + ++ V +S + S I T +G IT + + + K
Sbjct: 1 MRKWMIVAAVAAVFGLSACNNGDSEVIVKTKDGN-ITKEEFYNEM--------KARVGKE 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+++L+ E + ++ + ++ + + + + G + +
Sbjct: 52 VIRDLVHEKVLSKKYK-----VTDKEIDKEIENLKE---MYGTQYDLVVQQNG--EKAIR 101
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + M + E+ + K P + +
Sbjct: 102 DMVKLDL----LRQKAAMEDIKVTDKELKDYYKNYK----------------PKIRASHI 141
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
++ + +++L +D KL K S+ + G + + +F++ K
Sbjct: 142 LVKDEKTAEEIKTKLDKGEDFAKLAKQYSQDPGSAPNGGDLGWFGPGKMVKEFEDAAYKL 201
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-----SAQNTPTKIEKHEAEYVKK 307
++P T G I + DK + +K + ++ P K++ + +K
Sbjct: 202 KVGQVSDPVKTDYGYHIIKVTDKEEKKPFNEMKEEIEFEVKQSKLDPAKVQSKVEKLIKD 261
Query: 308 LR 309
+
Sbjct: 262 AK 263
>gi|282855468|ref|ZP_06264788.1| foldase protein PrsA [Pyramidobacter piscolens W5455]
gi|282586694|gb|EFB91942.1| foldase protein PrsA [Pyramidobacter piscolens W5455]
Length = 303
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 73/284 (25%), Gaps = 36/284 (12%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKING----ELEKIAVQELIVETLKKQEIEKS 93
++ T+ GE IT D+ + ++ Q+ E + + LI + + +
Sbjct: 26 ADKKVLATVAGETITQADLDQAMSGFDPQQRAAYASPEGQAQLLDNLIDFKVFARSGREQ 85
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ + + LD+ G
Sbjct: 86 KLQNSPK-YKEAMANLEQRLLFTLAT-EKILDEAGKTPAT-------------------- 123
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ--GFVQKRIKDAEESRLR 211
+ + +K+ + +L N +K + +
Sbjct: 124 --DQDAQKYYDEHKEIFQVPAAIR--ASHILIRADKNMPAKDQKAAQEKAADLIRDIKAG 179
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEY 269
+ + ++ G Y + + P+F+ + T P T G
Sbjct: 180 KTTFEDAAKNNSADGTRSRGGDLGYFSKGQMVPEFEKAAFALKKGEMTAKPVKTDFGYHV 239
Query: 270 IAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSN 311
I D RD + + A K K + LR+
Sbjct: 240 IKATDSRDASIRPFAEVKEDIKADLVRQKQVKAIQDERDALRAR 283
>gi|45658751|ref|YP_002837.1| hypothetical protein LIC12922 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45601995|gb|AAS71474.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 362
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 45/319 (14%), Positives = 106/319 (33%), Gaps = 19/319 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDIS-KRIALLKLQKI----- 68
L F+ +F + + A S +R+ T+ I++ D+ +LQK
Sbjct: 26 LKNRFLTGMFVFLFFLRSTHAAESLNRVIATVGTVSISELDLDDATEKYNRLQKHLKHED 85
Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLD- 125
+ LI + E+ I + V+ + G++ + F ++
Sbjct: 86 YRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMET 145
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+ + L Q +++ + E EI + + K+ E R +
Sbjct: 146 SSGMPFELWVTELPYQIKKGQLLQLKIAVP-PPNEQEIRSWYNQNKDKVGFEIRYRIISI 204
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLH 243
+ ++ +Q + + K + + +S L P + + + +++ DL+
Sbjct: 205 APENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLY 264
Query: 244 PQFQNLLK----KSQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ + + ++ + I KR E L+ + K E
Sbjct: 265 KYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRPTPMEN-LRGGIQNILYRDKEE 323
Query: 299 KHEAEYVKKLRSNAIIHYY 317
++K+ R+ I +
Sbjct: 324 DTFHRWLKESRAEIPIQIF 342
>gi|319781324|ref|YP_004140800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317167212|gb|ADV10750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 305
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 91/289 (31%), Gaps = 65/289 (22%)
Query: 41 RIRTTINGEVITDGDI-----SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
++ T+NG+ +T+ D+ +L + A+ I + + +G+
Sbjct: 51 KVIATVNGQPLTEADLVLAEGELSQQFAQL--PPEQRRAAALSAAIEIRVMAAQAVTTGL 108
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
D + R +FL ++ + ++V+ + K
Sbjct: 109 DKDPD--------FQRRM--------AFLQQRALH--------------GEMVEKGVVDK 138
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+ +++ E R +L + + +++ A+ +L
Sbjct: 139 VTDAEVRARYDQEIANTPPTNELHARHILVKTKEEA---EAIIKQLDGGADFQKLANEHT 195
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT-NPYVTQKGVEYIAIC 273
+ K S G + + P+F + T P TQ G I +
Sbjct: 196 SDPSGK-------TSGGDLGWFGPGQMVPEFDKAASALEVGKYTEQPVQTQFGWHVIKLE 248
Query: 274 DKR-------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
DKR D + A +A + + VK LR+ A +
Sbjct: 249 DKRTKQPPAFDDVKDQAKQAVIRDKYFA---------LVKSLRAGAKVE 288
>gi|313498575|gb|ADR59941.1| SurA domain-containing protein [Pseudomonas putida BIRD-1]
Length = 213
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 21/199 (10%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVI---------TDGDISKRIALLKLQKING---EL 72
C++ +++ SWA +NG I ++ + + + + G L
Sbjct: 6 LCLLLVLTRASWA--DVPAARVNGVEIGLMRLERYFSEY-LDAQGRAVTSIRNPGLYKRL 62
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
A+ ELI + L QE ++ GI V+ + G S F L + G
Sbjct: 63 RDQALDELIDKELLWQEAQRQGIAVSDEQVSAQVGEIEAAFG-SPALFERRLAEAGFDRA 121
Query: 133 HFKQYLAIQSIWPD---VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ +Y + ++ G +E AN+++++ + +
Sbjct: 122 QYTEYTRHEMAAQQVYALLSAVDAPSQGEVEAFYDANQERLQGAQNQSDN--PSVIREHG 179
Query: 190 NKLQNQGFVQKRIKDAEES 208
L + +R A +S
Sbjct: 180 LALARAALIGQREAQARQS 198
>gi|322379060|ref|ZP_08053463.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter suis
HS1]
gi|321148552|gb|EFX43049.1| putative peptidyl-prolyl cis-trans isomerase [Helicobacter suis
HS1]
Length = 267
Score = 52.3 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 46/276 (16%)
Query: 51 ITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
IT+ D I +R K+ E +K +++ I L ++E +K +
Sbjct: 21 ITENDFDVIKQRNPNFDFNKLKPEQKKALLEQAINNLLIEREAKKEKLDDT--------A 72
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ A+ +K+ L ++ W + + + K E ++
Sbjct: 73 EFAKRM------------------AGYKKQLLVEI-WAKH-QAEAIGKEDIPEDQLRKYY 112
Query: 168 QKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Q K +E R +L + + + K + R+ K+ + S
Sbjct: 113 QDNKTQFVQQEAKARHILVKTEADAKRVISELNK------TPKTRIEKEFIDIANRESID 166
Query: 227 HDV----SIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGG 280
+ + G ++ + P+F N + + T P T+ G I + K +
Sbjct: 167 PNTKNSKNGGDLGKFQKNQMAPEFSNAVFALKPGSYTKTPVKTEFGYHVIYLMSKNEPKT 226
Query: 281 EI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ + + +++ ++KLR N I
Sbjct: 227 PTFEQARQTIIGILKEHQFQEYVKGELEKLRKNVRI 262
>gi|303243162|ref|ZP_07329598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio
cellulolyticus CD2]
gi|302589297|gb|EFL59109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acetivibrio
cellulolyticus CD2]
Length = 461
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 29/266 (10%)
Query: 65 LQKINGELEKIAVQELIVETLKKQE--IEKSGITFDSNTVNYFFVQH-ARNTGLSAEDFS 121
LQK + E + + +LI E + + KS + VN + ++ A S E +
Sbjct: 83 LQKTDEERNDMFLDQLI-EKVVMDDYFANKSNVKVSDEEVNAYVAKYVAPRYSGSEEQ-T 140
Query: 122 SFLDKQGIG-----DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
++ G N K YL Q + + E ++ K+ +
Sbjct: 141 TYFQSMGFANEEDMKNTIKDYLLKQQV---YYAAATKAGLTLTDKERKDAYEEHKSY-NK 196
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ +R +L +I D + + Q + + + ++L+ + L K S D +
Sbjct: 197 KVDLRNILVAINDKRTKEQA---QELANTVYTKLKNGESFEALAKQYS--DDSESKENGG 251
Query: 237 LLESDLHPQFQN-----LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
++ L + + K P KG E + I + + S
Sbjct: 252 QKKNVLPGNNETDYDNAVFKAEAGQLLEPIYLAKGYEIVKI---EKVTDFYHPEEEYSQT 308
Query: 292 NTPTKI--EKHEAEYVKKLRSNAIIH 315
K E+ + ++ + I
Sbjct: 309 VLVEKFLNSDKYKEWFESIKKDYQIE 334
>gi|196033913|ref|ZP_03101324.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus W]
gi|195993593|gb|EDX57550.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus W]
Length = 283
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 50/306 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L +++ + S + T+ G IT+ ++ L+ + L ++
Sbjct: 3 KKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGESTLYQMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
+ + +++ K + G ++F S L++ G+ ++ K
Sbjct: 59 LSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLKNEDELK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + +K E +I K+ E + +L
Sbjct: 106 EKMKPEIAFEKAIKA------TVTEKDI-------KDNYKPEMKVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
K +K+ ++ +D L K S+ G+ +F+ K
Sbjct: 145 EKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKL 200
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKL 308
+ P T G I + DK++L +K + +++ ++ V +L
Sbjct: 201 DAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNEL 260
Query: 309 RSNAII 314
+A I
Sbjct: 261 LKDADI 266
>gi|330836446|ref|YP_004411087.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
coccoides DSM 17374]
gi|329748349|gb|AEC01705.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
coccoides DSM 17374]
Length = 354
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/346 (12%), Positives = 98/346 (28%), Gaps = 50/346 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN---GEVITDGDISKRIALLKLQKINGEL 72
+ +F+++ + + + A+ S+ +N VIT ++ ++ +
Sbjct: 6 VRKFFIMVSIAVCAAGTLAA-AVISQPAAVVNLTKNTVITTEQLNAKVKEYQEAAATAGT 64
Query: 73 EK----IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR------NTGLSAEDFSS 122
++ +I + L Q + GI V+ V + L+ F
Sbjct: 65 AAPDALRVLEIMINDELVMQGSARDGIVITDAQVSQLVVDQKQTLEQQYGVTLTDAQFQQ 124
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN------KQKMKNITVR 176
+ Q F++ L Q + V+ ++ +++ + +
Sbjct: 125 AVTAQFGSMEAFRKALKEQLLVDTYVRKAKSDVIAQVKQPTDTEISSFFRQRRSEFFSPE 184
Query: 177 EYLIRTVLFSIPDNK------LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+ V + N+ + + L K + A+
Sbjct: 185 SIRLSHVFIPFAEGTDAQKTNDANKATLISLVSSIRSGSLTFEKAVQDYSQDAASRQ--L 242
Query: 231 IGKAQYLLE------SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG---- 279
G +L + L F + +N + G + D
Sbjct: 243 GGSIGWLTADNSDVVASLGQGFYDAAFALEVGQISNVVESASGYHILKSVSHLDAKMLGL 302
Query: 280 GEIA-----------LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ ++ YL AQN T ++ LRS A I
Sbjct: 303 DDTINPETTVTVREYIRQYLLAQNQQTAYVNAVNALIQDLRSLANI 348
>gi|229139028|ref|ZP_04267605.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26]
gi|228644383|gb|EEL00638.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST26]
Length = 288
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 102/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G V T+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 58 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQLGLK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 149 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFE 199
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQ 259
Query: 305 --VKKLRSNAII 314
V +L +A I
Sbjct: 260 QVVNELLKDADI 271
>gi|311748699|ref|ZP_07722484.1| putative PPIC-type PPIASE domain protein [Algoriphagus sp. PR1]
gi|126577231|gb|EAZ81479.1| putative PPIC-type PPIASE domain protein [Algoriphagus sp. PR1]
Length = 666
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 29/221 (13%)
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV-------------VKNDFMLKYG 157
+TG+S ++F L++ I K A++ + +K +++K
Sbjct: 62 SSTGMSRDEFEENLNQF-INYK-LKVREAVELGMDESQEFLMEFESYKENLKAPYLIKNS 119
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E E+ +M+ + +LF P N Q R+ + ++ D N
Sbjct: 120 LEEGELRKAYSRMQEV----VRASHILFQFPPNASQEDSLSVLRMALKVKDQIENGGDIN 175
Query: 218 KLEKFASKIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
+L S+ + G Y + F++ ++P +T G I + D
Sbjct: 176 ELALEYSEDPSAKQNKGDLGYFTALQMVQPFEDAAFSLQAGQVSDPVMTNFGYHIIKVLD 235
Query: 275 KRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
KR G+ + E R A I
Sbjct: 236 KRPNPGQVRVSHILVRIDADDPNAEDLAR------RKVADI 270
Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K + + +L I + + ++++ D + + K S+ S
Sbjct: 236 KRPNPGQVRVSHILVRIDADDPNAEDLARRKVADIYTEIQKENTVWENIVKNYSEDPASS 295
Query: 231 --IGKAQYLLESDLHPQFQ-NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
G + + P+F+ ++ + P T+ G + + DK+ + L+
Sbjct: 296 QNGGMLPWFSVGSMIPEFEMAAFSLTEIGEVSPPVKTKYGYHILRLEDKKPIDSFEDLEE 355
Query: 287 YLSAQNT 293
+ ++
Sbjct: 356 SIRSRIM 362
>gi|146310569|ref|YP_001175643.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Enterobacter sp.
638]
gi|145317445|gb|ABP59592.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterobacter sp.
638]
Length = 624
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 55/355 (15%), Positives = 103/355 (29%), Gaps = 90/355 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGE------- 71
++I+ I+ VS SS +NG+ I+ G A ++Q+ G+
Sbjct: 20 IIILSFILTGVSGYLIGGSSNYAAEVNGQEISRGQFENAFAGERNRMQQQLGDQFSELAA 79
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FV 107
L + V LI E L Q ++ G+ + V +
Sbjct: 80 NEGYMKTLRQQTVNRLIDEALLDQYAKRLGLGISDDQVKKAIFSTQAFQTNGKFDNTRYN 139
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDN----------HFK---QYLAIQSIWPDVVKN---- 150
G++A+ ++ L Q K LA VV+
Sbjct: 140 AIVNQMGMTADQYAQALRNQLTSQQLINAVVGTDFMLKGETDELAALVSQQRVVRAATID 199
Query: 151 --DFMLKYGNLEMEIPA-NKQKMKNITVRE-------------------------YLIRT 182
K + E+ A +Q N T E Y +
Sbjct: 200 VNALAAKQQASDEEVKAYYEQNKNNFTAPEQFRVSYIKLDAATMPETASDSDIQSYYDQH 259
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQYLL 238
+ + K DA+ L K + +K D+ + G +L
Sbjct: 260 QDQFTQAQRNRYSVIQTKTEADAKAVVDELAKGADFATVAKAKSTDIISAKNGGDMGWLE 319
Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
++ + +N K + + + G + + D + ++ +IA K
Sbjct: 320 DATTPEELKNAGLKEKGQLSGVIKSSVGFLVVRLDDIQPAKTKPLAEVRDDIAAK 374
>gi|89100557|ref|ZP_01173417.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911]
gi|89084744|gb|EAR63885.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911]
Length = 293
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 21/231 (9%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
A+ L+ + + + E +K +T + + G E F + L++ G+ +
Sbjct: 58 EALDALVTDKIIEMEAKKEKVTISNKEKEEELKNLKESYG-GEEGFKAALEQSGVTEAGI 116
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + +++ LK ++ NK + + +L
Sbjct: 117 AEDIEKYLKTEKLLEPRIDLKEDEIKAYFEENKD--QFAQQEQVKASHILV--------E 166
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-S 253
K +K + + AS + S G+ Y + ++ F+ +
Sbjct: 167 DEATAKEVKSKLDKGEEFADLAKEYSTDAS--NAESGGELGYFGKGEMEAAFEEAAFELK 224
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL-------GGEIALKAYLSAQNTPTKI 297
N + P T G I + DK++ E A KA +
Sbjct: 225 ANEISGPVKTDYGYHIIKVEDKKEAKEAVYEDSKEAAKKALFDERMQTEYY 275
>gi|196043445|ref|ZP_03110683.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB108]
gi|225864299|ref|YP_002749677.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB102]
gi|196025754|gb|EDX64423.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB108]
gi|225788486|gb|ACO28703.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB102]
Length = 283
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 50/306 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L +++ + S + T+ G IT+ ++ LK + L ++
Sbjct: 3 KKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELKQKYGESTLYQMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
+ + +++ K + G ++F S L++ G+ ++ K
Sbjct: 59 LSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLKNEDELK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + +K E ++ K+ E + +L
Sbjct: 106 EKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
K +K+ ++ +D L K S+ G+ +F+ K
Sbjct: 145 EKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKL 200
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKL 308
+ P T G I + DK++L +K + +++ ++ V +L
Sbjct: 201 DAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNEL 260
Query: 309 RSNAII 314
+A I
Sbjct: 261 LKDADI 266
>gi|149928383|ref|ZP_01916623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
gi|149822918|gb|EDM82164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Limnobacter sp.
MED105]
Length = 633
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/387 (9%), Positives = 106/387 (27%), Gaps = 95/387 (24%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKIN 69
++ + F+ F + + Y + + + + I+ + + R + + + +
Sbjct: 10 IMQFVLLLFIAPAFALFGLEGYNTVSADANALAIVGDYPISQEEFDQVKRERIEEARAQS 69
Query: 70 GE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---------- 108
GE + + + L+++ L +Q ++K +T + +
Sbjct: 70 GENFDPKVFESPEINRQLLDTLVLQYLLQQSVQKQYLTASDKALAEDIARTPLFQVDGKF 129
Query: 109 --------HARNT------------GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
A GL+ + + K L + VV
Sbjct: 130 DLETYKRELAARGLTPTQHEANVRFGLARNQVLDPVLRASFFPETLKTQLDDVQLAGRVV 189
Query: 149 KND------FMLKYGNLEMEIPA------------------------------------- 165
+ ++ + ++ A
Sbjct: 190 RVKNIDLAPYLANVSITDEQVAAFYETNKAQFMAPQKADVEYVVLSPDTIKSKIEVSDAD 249
Query: 166 -----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ K + T E R +L K E + K +
Sbjct: 250 IAAYYEQNKARFSTPEERRARHILLDAEKEGASADDLKAAAEKVLAELKANPSKFAELAK 309
Query: 221 KFASKIHDVS-IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR-- 276
+++ + G + + + P+F Q + + + + +Q G + + + R
Sbjct: 310 QYSIDPGSANQGGDLGFFGKGAMVPEFEQAVFSQKKGELSGLVKSQFGYHIVEVTEIRGG 369
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAE 303
++ +K ++ + K+ A+
Sbjct: 370 EVQALEDVKTQIADEIKNQKMTAQFAD 396
>gi|293605682|ref|ZP_06688060.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
gi|292815920|gb|EFF75023.1| peptidyl-prolyl cis-trans isomerase [Achromobacter piechaudii ATCC
43553]
Length = 684
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 61/182 (33%), Gaps = 16/182 (8%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKI 68
+++L+ ++ F +V I Y S+ T+ G+ I+ + D + R L ++++
Sbjct: 40 RWMQLILLLLIVPSFFLVGIQGYDSFMRKEPELATVAGQPISRAEFDQAHRNQLEQMRQR 99
Query: 69 NGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTG 114
G L + + +LI + L + T+ + N
Sbjct: 100 QGARFDPAVSDTPALREGLLNQLINQRLLANVAVDNRFNVSDETLRNTIAAIPEVQDNGR 159
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
S E + L QG+ F+ L V+ E+ + T
Sbjct: 160 FSPERYRQVLAAQGMSPTSFEAGLRRDLAVGRVLDPVGQSARAPAEVVASLESALTQQRT 219
Query: 175 VR 176
V+
Sbjct: 220 VQ 221
>gi|332293065|ref|YP_004431674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter
diaphorus 4H-3-7-5]
gi|332171151|gb|AEE20406.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter
diaphorus 4H-3-7-5]
Length = 483
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 82/290 (28%), Gaps = 26/290 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEK----IAVQELIVETLKKQEIEKSGI 95
+ + +I + DI + +L+++++ + L+ L + + I
Sbjct: 61 DGVAGVVGDYLILESDIDQ--SLIEIKQRGQASADITSCQVLGSLLENKLLTHQAVQDSI 118
Query: 96 TFDSN----TVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ V+ + A G +F + F + +I D +
Sbjct: 119 VVQDSRVNSEVDQMVQRFASQLGSEQKVVEFYRKESMADLRAELF--SIRKNNILSDRMN 176
Query: 150 NDFMLKYGNLEMEI----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR---I 202
+ EI E I ++ + + Q + +
Sbjct: 177 QKIVESVDVTPDEIKTFFNRIPADELPTFGVELEIARIVIEPKATEEERQKVIDRLKGFR 236
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
+D E+ + D + L +F+++ + P+
Sbjct: 237 RDILENGSSFATKAVLYTDDGASRPDGGLMVIDRKTP--LVKEFRDVAFSLQDGEISEPF 294
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T+ G + + + +I + L E+ + V K+R
Sbjct: 295 ETEFGFHIVTVEKTKGERKDI--RHILLVPEIKEAQEEEAKDLVNKVRKR 342
>gi|268319932|ref|YP_003293588.1| peptidylprolyl isomerase [Lactobacillus johnsonii FI9785]
gi|262398307|emb|CAX67321.1| peptidylprolyl isomerase [Lactobacillus johnsonii FI9785]
Length = 298
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 87/285 (30%), Gaps = 35/285 (12%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ I + + T G IT+ ++ + Q L + +
Sbjct: 8 AATVLAFAGIALSATACSGGKAVVTYKGGKITESQYYDKMK--ESQAGQSTLASM----I 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ + L+ Q G V+ + ++ + G F S L++ G+ + FK L
Sbjct: 62 VSDALESQ----YGKDVTQKQVDKEYNKYKKQYG---SQFDSVLEQNGMTASTFKDNLKT 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +++ PA ++K E ++ +L +K V K
Sbjct: 115 NLL--------TEAALKHIKKITPAQEKKAWKSYQPEVTVQHILV----SKKSTAEDVIK 162
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNT-T 258
+++D + K K + +D A +S L F+ K T
Sbjct: 163 QLQDGGD----FKKLAKKYSTDTATKNDAGKLPAFDSTDSTLDSSFKTAAFKLKTGEITT 218
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
P TQ G I + + + Q + +
Sbjct: 219 TPVKTQYGYHVIKM--IKHPAKGTLKEH--KKQIDNQIYQSMSED 259
>gi|182417449|ref|ZP_02948776.1| peptidil-prolyl cis-trans isomerase [Clostridium butyricum 5521]
gi|237665664|ref|ZP_04525652.1| peptidil-prolyl isomerase family protein [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182378618|gb|EDT76145.1| peptidil-prolyl cis-trans isomerase [Clostridium butyricum 5521]
gi|237658611|gb|EEP56163.1| peptidil-prolyl isomerase family protein [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 252
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 68/238 (28%), Gaps = 38/238 (15%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ ING+ IT+ D+ I+ ++++ + +
Sbjct: 5 VLAIINGKEITEFDVENIISQYSEADQKSVNTDNGREKILDQLVSC-------------- 50
Query: 102 VNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
A++ L ++F + ++ + Q E
Sbjct: 51 --ELMYNFAQDEKLEETDEFK-------VRIEEARKDILTQMGISK---AAGKESINENE 98
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
N K K I ++ +L ++Q + E +++ K
Sbjct: 99 ALDYYNSNKEKFIIGEMVSVKHILV-------ESQEEAYNVKNEIENNQISFSDAALKYS 151
Query: 221 KFASKIHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
S ++ S+G L + N T+P T+ G I + D RD
Sbjct: 152 MCPSNMNGGSLGTFGRGKLTASFEEA---AFNAKINILTDPVETEFGFHIILVEDFRD 206
>gi|320540341|ref|ZP_08039993.1| putative peptidyl-prolyl cis-trans isomerase (rotamase D) [Serratia
symbiotica str. Tucson]
gi|320029661|gb|EFW11688.1| putative peptidyl-prolyl cis-trans isomerase (rotamase D) [Serratia
symbiotica str. Tucson]
Length = 628
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 24/158 (15%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+VI + + + ++Q+ G+ + + + +LI L
Sbjct: 42 AAKVNGQVIERAQLEQVFQSERQRMQQQLGDQFSVLAGNEGYMQRMRQQVLSQLIDNMLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q +K G++ + + + + L G + F Q + Q
Sbjct: 102 AQYAKKLGLSVSDEQIKNAIRKTPYFQTDGQFDNAKYLDLLGSMGYTVDDFAQSMRQQ-- 159
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+V +G +PA Q M + +++ +R
Sbjct: 160 ---LVNQQVTQAFGESGFMLPAESQAMAALLLQQRNVR 194
>gi|49185187|ref|YP_028439.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne]
gi|49479990|ref|YP_036442.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|165870489|ref|ZP_02215143.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0488]
gi|167633046|ref|ZP_02391372.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0442]
gi|167639670|ref|ZP_02397940.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0193]
gi|170687085|ref|ZP_02878304.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0465]
gi|170706725|ref|ZP_02897184.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0389]
gi|177649682|ref|ZP_02932684.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0174]
gi|190565511|ref|ZP_03018431.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis Tsiankovskii-I]
gi|196040038|ref|ZP_03107341.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus NVH0597-99]
gi|218903473|ref|YP_002451307.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH820]
gi|227814851|ref|YP_002814860.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. CDC 684]
gi|229604551|ref|YP_002866676.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0248]
gi|254684916|ref|ZP_05148776.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066]
gi|254722324|ref|ZP_05184112.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055]
gi|254737363|ref|ZP_05195067.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North
America USA6153]
gi|254743452|ref|ZP_05201137.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B]
gi|254751679|ref|ZP_05203716.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum]
gi|254760198|ref|ZP_05212222.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94]
gi|301053856|ref|YP_003792067.1| peptidylprolyl isomerase [Bacillus anthracis CI]
gi|46396831|sp|Q81QT1|PRSA3_BACAN RecName: Full=Foldase protein prsA 3; Flags: Precursor
gi|49179114|gb|AAT54490.1| protein export protein prsA [Bacillus anthracis str. Sterne]
gi|49331546|gb|AAT62192.1| protein export protein prsA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164713644|gb|EDR19167.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0488]
gi|167512379|gb|EDR87755.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0193]
gi|167531858|gb|EDR94523.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0442]
gi|170128456|gb|EDS97324.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0389]
gi|170669136|gb|EDT19880.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0465]
gi|172084756|gb|EDT69814.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0174]
gi|190563538|gb|EDV17503.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis Tsiankovskii-I]
gi|196029297|gb|EDX67901.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus NVH0597-99]
gi|218538215|gb|ACK90613.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH820]
gi|227007172|gb|ACP16915.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. CDC 684]
gi|229268959|gb|ACQ50596.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0248]
gi|300376025|gb|ADK04929.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str. CI]
Length = 283
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 99/306 (32%), Gaps = 50/306 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L +++ + S + T+ G IT+ ++ L+ + L ++
Sbjct: 3 KKKLFLGTIISCVVLALSACGSSDNVVTSKVGN-ITEKEL---SKELRQKYGESTLYQMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
+ + +++ K + G ++F S L++ G+ ++ K
Sbjct: 59 LSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLKNEDELK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + +K E ++ K+ E + +L
Sbjct: 106 EKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
K +K+ ++ +D L K S+ G+ +F+ K
Sbjct: 145 EKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKL 200
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKL 308
+ P T G I + DK++L +K + +++ ++ V +L
Sbjct: 201 DAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNEL 260
Query: 309 RSNAII 314
+A I
Sbjct: 261 LKDADI 266
>gi|262394811|ref|YP_003286665.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. Ex25]
gi|262338405|gb|ACY52200.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. Ex25]
Length = 619
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 8/134 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q+ E G+ V Q N E + + L + G
Sbjct: 88 RKSVLDRMINDVLLDQQAEALGLRISDTQVRSMILDMPQFQSNGQFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ ++V+ + N E +P Q + + IRT+ + +
Sbjct: 148 SPDSFAEYMR-----RELVREQLLNALQNSEFILPGEVQAEGKLFTQTRDIRTIKIDLAE 202
Query: 190 NKLQNQGFVQKRIK 203
+ ++ +
Sbjct: 203 FAKNIELTDEEIQQ 216
Score = 42.7 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 92/284 (32%), Gaps = 34/284 (11%)
Query: 52 TDGDISKRIALLKLQKINGELEKIA---VQELIVETL--------------KKQEIEKSG 94
++G + I L++ + A +EL+ E L + E +
Sbjct: 129 SNGQFDQEIYQASLRRAGFSPDSFAEYMRRELVREQLLNALQNSEFILPGEVQAEGKLFT 188
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK--QYLAIQSIWPDVVKNDF 152
T D T+ + A+N L+ E+ + ++F + + + I
Sbjct: 189 QTRDIRTIKIDLAEFAKNIELTDEEIQQYYKA---NPDNFTRPEQVKVAYIELSAEALKE 245
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + E++ ++ K + + + +L + ++ Q + +
Sbjct: 246 QVNVSDAEVKKYYDEHLNKYSSEEQRRVAHILV-----EGDDEAKAQAILDELNAGADFA 300
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
K + F S + G ++ + P F+ K+ +T+ + G I
Sbjct: 301 TLAQEKSDDFGSAENG---GDLGWIERDVMDPAFEEAAFALKNPGDTSGLVKSDFGYHII 357
Query: 271 AICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + +D + + A + + + E +L A
Sbjct: 358 KLEELKDSVAKPFEEVAAEIKQEMVDQQAVDQFYELQSELERVA 401
>gi|254499150|ref|ZP_05111837.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254351629|gb|EET10477.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 624
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 85/221 (38%), Gaps = 24/221 (10%)
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV-----KNDFMLKY 156
V + ++ +S E + + + H K+++A + + D V +K
Sbjct: 189 VTISAARFEKDAHVSPEAIADYYKQ------HQKEFMAPEQVSLDYVLLSMNNIKKHIKI 242
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ +++ N+ + +T ++ + +LF+ P++ +++ + + K A+++ L KD
Sbjct: 243 SDDDIKRFYNENQNNYLTPAQWQVAHILFATPEDVSKDE--LDQIQKKADDAYAALQKDP 300
Query: 217 NKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEY 269
+ EK + + D G ++ + +L + P T+ G E
Sbjct: 301 AQFEKLVTTLSDDKLSVAEKGALPWITAGQ--NDYDKILSNLTKPGEISAPEKTKHGYEI 358
Query: 270 IAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
+ + + + + + Q + A +++L
Sbjct: 359 FKLIAYKPVTMKSLAEVETTIKEQLLAEMAQTQYAHALEQL 399
Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 55/154 (35%), Gaps = 11/154 (7%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDIS- 57
M K+ + + L + I F + + Y ++ + T+NGE +T+ +I+
Sbjct: 1 MLQKLNERIQGVVAWLVVILIGITFTLFGVDYYFQSHQTTNSKVTVNGEPLTEQAFEINY 60
Query: 58 KRIALLK-----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+R ++ + +L+ + +++ + Q +G N N +
Sbjct: 61 RRARGMQDIAQMTAEDEKKLQNQVLDQMVTNEVMVQAAHTNGFNVSLNQANAAILNIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ S+E + L F+ + +
Sbjct: 121 QEDGHFSSEKYQQALSAALFTQLSFQNEVKQGML 154
>gi|94985701|ref|YP_605065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
geothermalis DSM 11300]
gi|94555982|gb|ABF45896.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
geothermalis DSM 11300]
Length = 635
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 89/292 (30%), Gaps = 22/292 (7%)
Query: 38 MSSRIRTTINGEVITDGDISK-RIALLKLQKING-----ELEKIAVQELIVETLKKQEIE 91
+ +NG+ +T ++ R + L +L+ V + + L Q +
Sbjct: 33 QAGTPALKVNGQTVTAEELEAIRRSFPALAGFESGPLADDLKTYVVAQKARQVLLIQAAK 92
Query: 92 KSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
I VN + + L+ + ++ L G+ D F+Q + Q K+
Sbjct: 93 D--IKVSRADVNAEVQKVRQANNLTDNKAWTDALQSAGLTDATFRQQVRDQLAVQR--KS 148
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTV-LFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + + + A + + R V + ++K + + +++ A+ ++
Sbjct: 149 EEIQQAAPPATDAEARLYYELHPESFQSDARIVGREIVVNDKAKAEALLKQVRGGADFAQ 208
Query: 210 LRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267
L E+ + + + D + T+ +
Sbjct: 209 LARQNSSEFAERGGALGPLENGRPRPVARVALPD--EVAAAAFALTGGGVTDVIASGGKF 266
Query: 268 EYIAICD----KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + + A + K + +++ L + I
Sbjct: 267 YIVKVEQYLPPQTKPFADAKADAVTA--VNRQKKDAAVEQWLTNLERDVKIE 316
>gi|228958588|ref|ZP_04120307.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228801099|gb|EEM47997.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 293
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ KN E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KNNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|313890790|ref|ZP_07824415.1| putative foldase protein PrsA [Streptococcus pseudoporcinus SPIN
20026]
gi|313120891|gb|EFR44005.1| putative foldase protein PrsA [Streptococcus pseudoporcinus SPIN
20026]
Length = 313
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/229 (17%), Positives = 79/229 (34%), Gaps = 29/229 (12%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
KL+T + L + S + S T+ G+ IT D K
Sbjct: 6 KLVTGFVTLASVVTLAACSSTN---DSTKVVTMKGDTITVTDFYKEAK-------TSTAA 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ LI+ + +QE G V + + A+ G S FS L + G+
Sbjct: 56 QQSMLSLIMSRVFEQE---YGKKVSDKKVEESYNKTAQQYGSS---FSEALGQAGLTTET 109
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+K+ + + ++ +K + AN +K E + ++
Sbjct: 110 YKKQIRTTML------VEYAVKQEAKKELTEANYKKAFESYSPEMTTQVIIM-------D 156
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
++ +K +++ + K + + K D + A L SD+
Sbjct: 157 DEAKAKKVLEEVKAEGADFSKIAKENTVESGKKIDFTFDSAGTDLPSDV 205
>gi|171058611|ref|YP_001790960.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
gi|170776056|gb|ACB34195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
Length = 637
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/395 (12%), Positives = 109/395 (27%), Gaps = 98/395 (24%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ ++ ++ F +V I Y ++ S+ I+G IT + D + R + +++
Sbjct: 9 NRLLQFGLALVIVPSFLVVGIQGYDQFSASNEAVANIDGRAITQTEWDAAHRQQVERVRA 68
Query: 68 I----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTG 114
+ +++ + +L+ E + +K + + F Q A
Sbjct: 69 QMPGVDAKLLDSPAIKQKVLDDLVRERVMLVAAQKLLLAPTDQRLQRLFATDPQFASLRN 128
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV-------------VKND---------- 151
L+ +G+ F Q L + V V
Sbjct: 129 ADGSVRKDLLEARGMTSEQFAQQLRQEFALRQVSLGLAGSALASPAVTARAMDSFFQQRE 188
Query: 152 ----------FMLKYGNLEMEIPANKQKMKNITVRE----YLIRTVLFSIPDNKLQNQ-- 195
++ K + E A +N + + V+ +P
Sbjct: 189 VQVALFPAKDYLSKVSASDAEQQAYYDDPRNAAQFQSPETVSVEYVVLDLPAVTAGINVN 248
Query: 196 --------GFVQKRIKDAEESRLR----------------------------LPKDCNKL 219
R + +E R R + K+
Sbjct: 249 EDDLRKYYDENAARYEQPQERRARHILVKLDADASDDAKAKAREKAAALLAEVQKNRAAF 308
Query: 220 EKFASKIHD-----VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAIC 273
A + D G ++ + F++ + + T+ G+ I +
Sbjct: 309 ADLARRQSDDPGSAAQGGDLDWIARGAMVKPFEDAVFGLKKGELGGIVETEFGLHVIEVT 368
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
D R GGE A + + ++ + +L
Sbjct: 369 DTR--GGEKRAFANVRGELEAEVRKQLAQKRYAEL 401
>gi|51244848|ref|YP_064732.1| peptidyl-prolyl cis-trans isomerase D [Desulfotalea psychrophila
LSv54]
gi|50875885|emb|CAG35725.1| related to peptidyl-prolyl cis-trans isomerase D [Desulfotalea
psychrophila LSv54]
Length = 634
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 39/125 (31%), Gaps = 2/125 (1%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYL 237
R +LF + + Q + + + + +D + +F+ G +
Sbjct: 273 HARHILFVVSPGDSDEKQQAQLKKAENVLKKAQADEDFAQLARQFSEGPSKSEGGDLGFF 332
Query: 238 LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+++ P F + + + + T G I + ++ + K + +
Sbjct: 333 ARAEMIPPFADAVFTLKNGDISGIVKTNFGYHIIKLEGIQEAKTKSLDKVREQIALSLQQ 392
Query: 297 IEKHE 301
+
Sbjct: 393 DQAKA 397
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 18/142 (12%)
Query: 40 SRIRTTINGEVITDGDISKR--IALLKLQKING-----------ELEKIAVQELIVETLK 86
S +NGE I+ + A +L G L+ V L+ + L
Sbjct: 42 SEAAIVVNGEEISLQQFQQAYDQAFQQLSDQFGGKVPKGMADALGLKDQVVNRLVQQELL 101
Query: 87 KQEIEKSGITFDSNTVN---YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+Q ++ G+ + + Q ++ + ++S L + + F+ + +
Sbjct: 102 RQGGKQMGVQLSAVEIQHAIQAMPQFHKDGAFDVKSYNSILAANRLSPSKFEANIRHDML 161
Query: 144 WPDVVKN--DFMLKYGNLEMEI 163
+ +F + E+E
Sbjct: 162 AEKTARAINEFSAHASDFEIEE 183
>gi|83815316|ref|YP_446773.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Salinibacter ruber DSM 13855]
gi|83756710|gb|ABC44823.1| PPIC-type PPIASE domain protein [Salinibacter ruber DSM 13855]
Length = 342
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/274 (11%), Positives = 86/274 (31%), Gaps = 19/274 (6%)
Query: 54 GDISKRIALLKL--QKINGELEKIAVQELIVETLKKQ----EIEKSGITFDSNTVNYFFV 107
R+++ + + + + + ++LI ++ E + + D VN
Sbjct: 68 YQQQVRMSMKRQAPSQQSEDQMQETHRQLIRGFARQHALRGEAKAQNLEVDPTQVNARLE 127
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ + S E F L + + + + LA Q + + ++ A
Sbjct: 128 KLKQRYE-SEEQFQKQLARNNMTVDSVRSLLADQFRQQQLQRQMAENYEEPSSDDVTAYS 186
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQN--QGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K + I + +L +N ++ + + +++ + +
Sbjct: 187 EKNRRIRA-----QHILIKAGENAPESEVDSARKAAAALVDSAKMEDVDFAELARRHSQG 241
Query: 226 IHDVSIGKAQYLLESDLHPQFQN---LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G + + +F L S + P T+ G I + + +
Sbjct: 242 PSAQKGGDLGFFTRDRMVDKFAEAAYALSDSGDVAPEPVRTRFGFHVIRLTNAGEPMDTT 301
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKK--LRSNAII 314
+ ++ + +E ++ +R+N I
Sbjct: 302 KARKQMTKERRQQAVEDQINALLEDATVRTNPDI 335
>gi|292490923|ref|YP_003526362.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
halophilus Nc4]
gi|291579518|gb|ADE13975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
halophilus Nc4]
Length = 637
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 91/280 (32%), Gaps = 25/280 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE---LEKIAVQELIVE--TLKKQEIE-KS 93
R + +N + +T R+ L L + L A Q+ + + L+ QE E
Sbjct: 134 QRYESVLNSQGLTTAAYEARLRLSLLSEQLASTLHLSAFATQQEMEDIARLRHQEREIGY 193
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK--QYLAIQSIWPDVVKND 151
GI S + +S E+ + ++ + F+ + +A+ +
Sbjct: 194 GIVPSSKFRDAI--------QISDEELRQYYEEH---PDEFRTPERVAVDYLRLTAKSLA 242
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ + + K + T + +L +P + + RL+
Sbjct: 243 TDIPVDEQTLRDLYAESKDQFGTPEQRRASHILVQVPQGGDDAARQAAREKAEEALRRLQ 302
Query: 212 LPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGV 267
+ ++ K S+ + G + + P F+ + + + P +++ G
Sbjct: 303 QGEPFEEVAKEVSEDPGSAQQGGDLGFFGRGVMDPAFEEAAFSLEKVGDLSEPVLSKFGY 362
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
I + + GE + + ++ E+ +
Sbjct: 363 HIIQLTGIQR--GEAPSFEEVREELAQKYRQQLAEEHFYE 400
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 41/274 (14%)
Query: 40 SRIRTTINGEVITDGDIS-------KRIALLKLQKINGE------LEKIAVQELIVETLK 86
+ ++NGE IT + +++ L + + E ++ ++ LI + L
Sbjct: 39 EALAASVNGEEITTREFRAAFQRYTQQLRFLMREGFSEEMLDDPATKQRVLEGLIEQRLV 98
Query: 87 KQEIEKSGITFDSNTV------NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
+ G+ + + N F + S L+ QG+ ++ L +
Sbjct: 99 LDAAGELGLGMSDSELSKVIHNNEAFQDETGQFDFQRYE--SVLNSQGLTTAAYEARLRL 156
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + + + + +R I + + F
Sbjct: 157 SLLSEQLASTLHLSAFATQQEMEDIAR------------LRHQEREIGYGIVPSSKFRDA 204
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH---PQFQNLLKKSQNNT 257
EE R + ++ D + L +D+ ++L +S++
Sbjct: 205 IQISDEELRQYYEEHPDEFRTPERVAVD-YLRLTAKSLATDIPVDEQTLRDLYAESKDQF 263
Query: 258 TNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
P ++ + + GG+ A + +
Sbjct: 264 GTPEQ-RRASHILV---QVPQGGDDAARQAAREK 293
>gi|220916557|ref|YP_002491861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954411|gb|ACL64795.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 523
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/336 (13%), Positives = 85/336 (25%), Gaps = 68/336 (20%)
Query: 46 INGEVITDGDISKR----IALLKLQKINGELEK---------IAVQELIVETLKKQEIEK 92
+NG+ I+ D ++ + + Q G + A+ L L QE +
Sbjct: 51 VNGKSISAADFERQYENLLRFYQQQAGEGFTRELAAQLGLGRQALGVLEDRELALQEARR 110
Query: 93 SGITFDSNTVNYFFVQH----------------ARNTG-LSAEDFSSFLDKQ-------G 128
G+ V+ Q A S +F + + G
Sbjct: 111 RGVVVTDREVSEAVHQMPAFQENGQFRYETYLEAVRANYGSPGNFEAAVRDDLLYQKILG 170
Query: 129 IGDNHFK---QYLAIQSIWP------DVVK---NDFMLKYGNLEMEIPANKQKMKNITVR 176
K + Q V+ + + E A K
Sbjct: 171 ALVETVKVPATEVRAQWAASADRASLQFVRFPVAAAQAEVKVPDAEAKAFADKEGARVEA 230
Query: 177 EY-------------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Y +R VL + ++ ++ D +R++ +D K+
Sbjct: 231 FYKENADRYDQRAKAHVRHVLARVAPGASADEEAAARKKIDEAAARVKKGEDFAKVAAAL 290
Query: 224 SKIHDV--SIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI---AICDKRD 277
S + G ++ E + L + P T G I + R
Sbjct: 291 SDDPNTKDRGGDLGFVSEGLADAAFAKAALALKAGEVSEPVRTPAGWHLIRADEVVPARK 350
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ E A + + E + A
Sbjct: 351 VTLEAARLDIARELLARDRAQALAREKAQAALDAAR 386
>gi|285017392|ref|YP_003375103.1| peptidylprolyl isomerase (rotamase d) protein [Xanthomonas
albilineans GPE PC73]
gi|283472610|emb|CBA15115.1| probable peptidylprolyl isomerase (rotamase d) protein [Xanthomonas
albilineans]
Length = 661
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/320 (10%), Positives = 90/320 (28%), Gaps = 85/320 (26%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQ 127
+ ++ + +LI E + K E++G+ +V + N E + L
Sbjct: 103 DNKRKVLDQLIDEQVVKLAAEQAGVVIGDASVRDYIASIPAFQNNGKFDPERYRLALA-S 161
Query: 128 GIGDNH-------FKQYLAIQSIWPDVVKNDFMLK---------YGNLEMEIPANKQKMK 171
G + L I ++++ F K G A +M
Sbjct: 162 GTPPRTPAMFQQLVRDALQQSVIPTGLMESAFGSKQETERLMKMLGETRDVELAMLPEMP 221
Query: 172 NITVREYLIRTVLF------------------------SIPDNKLQNQGFVQKRIKDAE- 206
T + + +P +K ++ ++KR ++ +
Sbjct: 222 ADTAPVSDAQVQQWYDTHTSDFKQPETVSIEYVELNAAKLPASKPADEATLRKRYEEEKA 281
Query: 207 ---------ESRLRLPKDCNKLEKFASKIHDV---------------------------- 229
S + + + + A++ V
Sbjct: 282 RFVEPDQRLASHILISAGKDAASQKAAEAKAVKLAAEAKRPGADFAALARANSDDPGSKN 341
Query: 230 SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ G ++ + + F++ L P ++ G I + + + G+ + +
Sbjct: 342 AGGDLGWVEKGVMVKPFEDALFAMKPGEIVGPVKSEFGYHVIQLREVKGGKGKSFEQ--V 399
Query: 289 SAQNTPTKIEKHEAEYVKKL 308
Q +++ + + L
Sbjct: 400 RDQLASEQLQADNEKALSAL 419
>gi|294827708|ref|NP_710856.2| hypothetical protein LA_0675 [Leptospira interrogans serovar Lai
str. 56601]
gi|293385551|gb|AAN47874.2| hypothetical protein LA_0675 [Leptospira interrogans serovar Lai
str. 56601]
Length = 344
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/319 (14%), Positives = 106/319 (33%), Gaps = 19/319 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDIS-KRIALLKLQKI----- 68
L F+ +F + + A S +R+ T+ I++ D+ +LQK
Sbjct: 8 LKNRFLTGMFVFLFFLRSTHAAESLNRVIATVGTVSISELDLDDATEKYNRLQKHLKHED 67
Query: 69 -NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLD- 125
+ LI + E+ I + V+ + G++ + F ++
Sbjct: 68 YRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMET 127
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
G+ + L Q +++ + E EI + + K+ E R +
Sbjct: 128 SSGMPFELWVTELPYQIKKGQLLQLKIAVPP-PNEQEIRSWYNQNKDKVGFEIRYRIISI 186
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLH 243
+ ++ +Q + + K + + +S L P + + + +++ DL+
Sbjct: 187 APENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLY 246
Query: 244 PQFQNLLK----KSQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ + + ++ + I KR E L+ + K E
Sbjct: 247 KYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRPTPMEN-LRGGIQNILYRDKEE 305
Query: 299 KHEAEYVKKLRSNAIIHYY 317
++K+ R+ I +
Sbjct: 306 DTFHRWLKESRAEIPIQIF 324
>gi|188586655|ref|YP_001918200.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351342|gb|ACB85612.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 232
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 14/146 (9%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQKING------ 70
VLI + + + + +N + + + D+ + + L++++++ G
Sbjct: 4 KKVVLIALSALLLFVLTACGNDDEVVAIVNDQELKEEDLDRFKQQLIQMRQLYGMPVDEE 63
Query: 71 ------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
EL+K AV+E++ ET+ Q+ E+ GIT D V S E L
Sbjct: 64 DEEQMDELQKEAVEEMVTETVLLQKAEEEGITVDEELVENELEAIENQFE-SDEQMEEAL 122
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKN 150
D G+ + + + +++
Sbjct: 123 DMYGLTSEDLESEIRNSYMIEELITG 148
>gi|186475780|ref|YP_001857250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
gi|184192239|gb|ACC70204.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
Length = 642
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/312 (9%), Positives = 98/312 (31%), Gaps = 35/312 (11%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + +L V I ++ + S ++NG IT + D + R +
Sbjct: 5 FRNHQRLMMFMLILVILPGLGFVGIQGFRGFFDESANVASVNGHKITRGEFDNAWRQQMD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF-----V 107
+ +++ G E K + LI + + E ++ +T + + +
Sbjct: 65 RARQMLGAQFDAKMFDTPERRKDMLDGLIQQRVLADETQRLHLTVSDDALRRALLADPVI 124
Query: 108 QHARNTGLSAE--DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+N S + + L QGI + +++ + + + +
Sbjct: 125 GSLKNPDGSIDVNKYKELLAMQGITPDQYQEQVRYSMSMQQLPAAITQTSFTPKTL---- 180
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
Q + + ++ ++ + F + + + Q + + R ++
Sbjct: 181 -AQHLTELAEQQREVQGLAFRAKEYESKVQPTDAQIQAYYDAHRDDFATPATATIQYL-V 238
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ ++ A +++L + + + ++ + + + K +
Sbjct: 239 LSPATLAAAANPSDAELKKYYDDNIAHFRTPGEV-------RASHILIVAPKDASSADKE 291
Query: 284 LKAYLSAQNTPT 295
+ +
Sbjct: 292 KAKQKAREVLAQ 303
>gi|65319635|ref|ZP_00392594.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus
anthracis str. A2012]
Length = 283
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 50/306 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
L +++ + S + + G IT+ ++ L+ + L ++
Sbjct: 3 KKKLFLGTIISCVVLALSACGSSDNVVXSKVGN-ITEKEL---SKELRQKYGESTLYQMV 58
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFK 135
+ + +++ K + G ++F S L++ G+ ++ K
Sbjct: 59 LSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLKNEDELK 105
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + +K E ++ K+ E + +L
Sbjct: 106 EKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--------D 144
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
K +K+ ++ +D L K S+ G+ +F+ K
Sbjct: 145 EKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKL 200
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKL 308
+ P T G I + DK++L +K + +++ ++ V +L
Sbjct: 201 DAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNEL 260
Query: 309 RSNAII 314
+A I
Sbjct: 261 LKDADI 266
>gi|160898739|ref|YP_001564321.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans
SPH-1]
gi|160364323|gb|ABX35936.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans
SPH-1]
Length = 261
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 96/308 (31%), Gaps = 64/308 (20%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEK 74
+L ++S + + S++ +NG+ + R LK Q ELE
Sbjct: 5 LLTSLVTAAVLSTAALSASAQNIAVVNGKAVP----KARAEALKQQIEQSGRPVTPELEG 60
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+E+I + QE K + +
Sbjct: 61 QIKEEVIAREIFMQEANKRSLANSEA---------------------------------Y 87
Query: 135 KQYL--AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNK 191
KQ + A Q+I + DF K + E A K + +EY +L D
Sbjct: 88 KQQMELARQTILIRALFEDFQKKNPVTDAEAKAEYDKAVAANSGKEYKASHILVESED-- 145
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQN- 248
A + ++ K + K SK G + + P+F
Sbjct: 146 ----------RAKAIIAEIKAGKKFEDIAKKESKDPGSGARGGDLDWANPGNYVPEFSEA 195
Query: 249 LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
L+K + T P TQ G I + D R E+ + Q ++ A++ +
Sbjct: 196 LIKLEKGGMTQEPVKTQFGYHIIRLDDARQ--AELPKFEEVKPQIVQQLQQQKLAQFQES 253
Query: 308 LRSNAIIH 315
LR A I
Sbjct: 254 LREKAKIQ 261
>gi|315453564|ref|YP_004073834.1| major antigenic peptide PEB3\Peptidyl-prolylcis-transisomerase C
[Helicobacter felis ATCC 49179]
gi|315132616|emb|CBY83244.1| major antigenic peptide PEB3\Peptidyl-prolylcis-transisomerase C
[Helicobacter felis ATCC 49179]
Length = 291
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 96/309 (31%), Gaps = 41/309 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD---ISKRIALLKLQKINGE 71
+L + + + +N IT+ D + +R + +
Sbjct: 7 ILAGLLGFGVLGATTLATVTFTGKKGGKSEVVN---ITESDFDVLKQRNPNFNFNNLQDK 63
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + + + I L ++E +K + +F S L
Sbjct: 64 QKMVLLDQAISNLLIEREAKKENLEDSP-------------------EFKSNLAS----- 99
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-ITVREYLIRTVLFSIPDN 190
+K+ L ++ +W + + + K E ++ K+ +E R +L +
Sbjct: 100 --YKKQLLVE-VWVKH-RAEIIGKEQIPEDQLKQYYDTNKDRFVQQEAQARHILVKTEAD 155
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNL 249
+ + K K E + + ++ + G +S + P+F + +
Sbjct: 156 ARRIISELNKVPKTKVEHEFIKIANRDSIDPNTKNTKN--GGDLGKFQKSQMTPEFSKAV 213
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ T P T+ G + + K K + + +++ ++
Sbjct: 214 FELRPGTYTKTPVKTEFGYHVVYLMHKSQPVTPTFAQAKQSIIGILKEQQFQEYVKGELE 273
Query: 307 KLRSNAIIH 315
KLR ++
Sbjct: 274 KLRKQVVVD 282
>gi|138894238|ref|YP_001124691.1| protein export protein prsA [Geobacillus thermodenitrificans
NG80-2]
gi|196251144|ref|ZP_03149822.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
G11MC16]
gi|226712005|sp|A4IKU2|PRSA_GEOTN RecName: Full=Foldase protein prsA; Flags: Precursor
gi|134265751|gb|ABO65946.1| Protein export protein prsA [Geobacillus thermodenitrificans
NG80-2]
gi|196209342|gb|EDY04123.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
G11MC16]
Length = 278
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 98/304 (32%), Gaps = 45/304 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + + +S + S + T NG IT + + + K
Sbjct: 1 MKKWMMATAVVSLMALSACNNGDSEAVVETKNG-AITKDEFYNEM--------KERVGKT 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+++LI E + ++ + ++ + G + + + G
Sbjct: 52 VLRDLIDEKVLSKKYK-----VTDEEIDREIERIKEAYG---TQYDLAVQQNG------- 96
Query: 136 QYLAIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + + I D+++ ++ + E+ K P + +
Sbjct: 97 EKVIREMIKLDLLRAKAAIEDIKVTDKELKEYYDNYK----------------PKVRASH 140
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LK 251
++ +++L +D KL K S+ + G + + +F+ K
Sbjct: 141 ILVEDEKTAKEVKAKLDKGEDFAKLAKEYSQDPGSASNGGDLGWFGAGKMVKEFEEAAYK 200
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRS 310
++P T G I + DK +K ++ + +K++ V KL
Sbjct: 201 LKVGEVSDPIKTDYGYHIIKVTDKEKKKTFDKMKEEITFEVKRSKLDPSTMQSKVDKLVK 260
Query: 311 NAII 314
+A +
Sbjct: 261 DANV 264
>gi|218529730|ref|YP_002420546.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
chloromethanicum CM4]
gi|240138037|ref|YP_002962509.1| putative cell-binding factor 2 precursor (Major antigen peb4A),
cbf2 [Methylobacterium extorquens AM1]
gi|218522033|gb|ACK82618.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
chloromethanicum CM4]
gi|240008006|gb|ACS39232.1| putative cell-binding factor 2 precursor (Major antigen peb4A),
cbf2 [Methylobacterium extorquens AM1]
Length = 300
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 86/280 (30%), Gaps = 46/280 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ +NG+ IT D++ A + G E L+ + + ++
Sbjct: 47 ETVVARVNGQAITAADLAI-AAEDPALSLPGVDEGAKQNLLVDYMVDLKVGAQA------ 99
Query: 100 NTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
A + + A +F L F+ L + K +
Sbjct: 100 ----------AESAKVGDAPEFKRKLAY-------FRDKLLLDDYLEREAKKAVTPEAAK 142
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E K + E R +L +++ +K +R++ +D K
Sbjct: 143 ALYEQTVKSMKPEE----EVRARHILV-------ESEDEAKKI-----AARVKGGEDFAK 186
Query: 219 LEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ SK G + + + F + K + ++P TQ G + + +K
Sbjct: 187 IAGEVSKDPGSKTEGGDLGWFSQERMVKPFADAAFKMTPGQVSDPVKTQFGWHVLRVEEK 246
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + + Q K + + + KLR A +
Sbjct: 247 RTKP--VPTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284
>gi|314936106|ref|ZP_07843453.1| foldase protein PrsA [Staphylococcus hominis subsp. hominis C80]
gi|313654725|gb|EFS18470.1| foldase protein PrsA [Staphylococcus hominis subsp. hominis C80]
Length = 329
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 23/239 (9%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L K +K D+ ++ + + G + F S L +QG+ + +K+ +
Sbjct: 74 LNKILADKYKDKVDTKRIDDDIKKEEKQYGGK-DQFESMLKQQGMTLDDYKEQKRL---- 128
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
K K + EI K K + +L + + + +K
Sbjct: 129 SAYQKQLLNDKIKVSDKEI---KDDTKKAS-------HILIKVKSDSDKEGLSDKKAKAK 178
Query: 205 AEESRLRLPKDCNKLEKFAS-----KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
AE+ + + K+ NK ++ A G Y+++ + +F + L K + +
Sbjct: 179 AEKIQKEVEKNPNKFDELAKKESMDSASAKKGGSLGYVIKGQMVDKFDKALFKLKEGQIS 238
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ T+ G I + D + + LK + Q + Y K L + Y
Sbjct: 239 DIVKTEYGYHIIKANKEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAY-KDLLKEYNVDY 296
>gi|262276274|ref|ZP_06054083.1| peptidyl-prolyl cis-trans isomerase PpiD [Grimontia hollisae CIP
101886]
gi|262220082|gb|EEY71398.1| peptidyl-prolyl cis-trans isomerase PpiD [Grimontia hollisae CIP
101886]
Length = 630
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/234 (9%), Positives = 74/234 (31%), Gaps = 26/234 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M ++ ++ + ++ F + Y + T+ E I+ +
Sbjct: 1 MMERLREGVNSIAVKIILGLIIFSFVFAGVGGYLASGSVQP-AATVGNEEISRNQFEQAY 59
Query: 61 A-------------LLKLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+L L + ++ ++ ++L QE + G+ + +
Sbjct: 60 QNERALMQAQAGDFFSQLLSDPNYLAQFRFNVLERMVNQSLLDQEAQNLGLRVSDDQIKQ 119
Query: 105 FFVQHARNTGLSA----EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ G + + + + L + G+ + F Y+ + +V + E
Sbjct: 120 TIREMPAFRGATGLFDNDLYLASLRRNGLTPDQFADYVRQDLVREQLVNA-----LISSE 174
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + + + + +RT+ + D + +++ E++ +
Sbjct: 175 FALKGELEALHKLEGQTRTVRTLTLPLADFAEKADITAEQKTAYYEQNPAEFVR 228
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 28/213 (13%)
Query: 106 FVQHARNTGLSAEDFSSFLDKQG---IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
A ++AE +++ ++ + FK + ++ G E E
Sbjct: 201 LADFAEKADITAEQKTAYYEQNPAEFVRPEQFK------IAYVELSGEGIADVAGVTEDE 254
Query: 163 IPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
A K T + + ++ Q K +A S L D +L
Sbjct: 255 AKAYYEANKASYGTAEQRKVSHIMI-------QGDDNAAKEKAEAVLSELNAGADFAELA 307
Query: 221 KFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKR 276
K S G+ + + + P F+ ++ + T + G I + D +
Sbjct: 308 KTRSDDTFSAEQGGQLDWFDKGVMDPAFEEAAFALNNKGDITGVVQSDFGFHIIKLDDVK 367
Query: 277 DLGGEIALK------AYLSAQNTPTKIEKHEAE 303
+ + A L Q+ K E
Sbjct: 368 PSDAKPFAQVRDDIMAQLKQQHAVEKFYALSNE 400
>gi|229109756|ref|ZP_04239342.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
gi|229144911|ref|ZP_04273308.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|229150538|ref|ZP_04278754.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|228633031|gb|EEK89644.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|228638633|gb|EEK95066.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|228673797|gb|EEL29055.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
Length = 293
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ KN E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KNNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|229030040|ref|ZP_04186105.1| Foldase protein prsA 1 [Bacillus cereus AH1271]
gi|228731301|gb|EEL82218.1| Foldase protein prsA 1 [Bacillus cereus AH1271]
Length = 288
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G ++F S L++ G+ ++ K+ + + + +
Sbjct: 73 KVSDEEAKKQVEEAKEKMG---DNFKSTLEQVGLKNEDELKEKMKPEIAFEKAI------ 123
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K E ++ K E + +L K +K+ ++ +
Sbjct: 124 KETVTEKDV-------KENYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 164
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 165 DFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAFKLDAGQVSEPVKTTYGYHIIK 224
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 225 VTDKKELKPFDEVKDQIRKDLEQQRLQDTTGKWKQQVVNDLLKDADI 271
>gi|332532266|ref|ZP_08408147.1| peptidyl-prolyl cis-trans isomerase PpiD [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038364|gb|EGI74809.1| peptidyl-prolyl cis-trans isomerase PpiD [Pseudoalteromonas
haloplanktis ANT/505]
Length = 633
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 21/199 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + + V++ F + I SY + +NG I+ D ++
Sbjct: 1 MLEKIREGSQGPVAKIILGAVILSFALAGIGSYLGQTTEQPV-AEVNGIKISQTDFNRAY 59
Query: 59 ---RIA--------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R ++ ++ + V L+ + L+ Q G+ +V
Sbjct: 60 QNERSRLEQQFGEYFTQIAADPNYMAQIRQGVVDRLVQQELQSQLAADLGLRVSDESVRK 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ + + + + + + F++YL VV LE
Sbjct: 120 TILELPYFQIGEKFNNDRYLQVIRQMNFQPDAFREYLRKDMTRSQVVSA-VAGTDFALES 178
Query: 162 EIPANKQKMKNITVREYLI 180
E+ + + +Y++
Sbjct: 179 ELKSAIALQQQTRSIDYVV 197
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 44/237 (18%)
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF---LDKQGIGDNHFKQY 137
I + +E + + V+ ++ +A LS E S L I
Sbjct: 193 IDYVVVNKEALAANVEVSDQEVSDYYDLNASQF-LSPELISVSYIELKAADINVE----- 246
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ +++ + K + + + + +L
Sbjct: 247 -----------------SVTDDDVKAYYEQNKAQYVEPEKRRVSHILI-----DNSEDDD 284
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKK--S 253
K +A ++L D +L + +S + G +++ + P F++ +
Sbjct: 285 AAKEKANALHAQLEQGADFAELAQSSSDDIVSGEMGGDLEWIERDVMDPAFEDAAFALEN 344
Query: 254 QNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALKAYLSAQNTPTKIEKHEA 302
+ + ++ ++ G I + D + D+ ++ + A+ EK
Sbjct: 345 KGDISDVVTSEFGYHIIKLTDIQPQQVKAYDDVKADLRAELE-QAEKIDAFYEKQTE 400
>gi|148261232|ref|YP_001235359.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum
JF-5]
gi|146402913|gb|ABQ31440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum
JF-5]
Length = 311
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 52/287 (18%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSG 94
+ ++G I D++K L Q N ++ + + L+ E + K+G
Sbjct: 52 QKDTVVAIVDGHDIHLSDVAKAAQDLPPQLQNAPPQELFPVLLNRLVDERALLVKARKAG 111
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
D A +A+ + YL +V+
Sbjct: 112 TAKDPK--------VAAEMKAAADQALE------------RAYLRA------LVEPKLTD 145
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
++ A+ K K E R +L + + K K
Sbjct: 146 AA--VKAYYDAHYVKAKQPE--EVKARQILVKTQQEAEKIIAQLGK-----------GAK 190
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAI 272
+K++ + G+ + + ++ F + T P +Q G I
Sbjct: 191 FSALAKKYSIDPGAKNGGELGWFTKDEMVKPFADAAFALKPGTYTKTPVHSQFGWHVIES 250
Query: 273 CDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KR+ K + Q T + ++ R I +
Sbjct: 251 QGKREKPVPPLADVKDQIRQQITNKAVTAA----LEDARKGLDIKLF 293
>gi|312864592|ref|ZP_07724823.1| putative foldase protein PrsA [Streptococcus downei F0415]
gi|311099719|gb|EFQ57932.1| putative foldase protein PrsA [Streptococcus downei F0415]
Length = 357
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62
SK+F SL F+ + I + + S + ++ G+ IT D+ R
Sbjct: 43 SKIFRSLLVFV------LAMAIGGVGTYLYMNSRPSEKTVLASMKGKEITVADLYNR--- 93
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
QK N ++ ++ ++ + L+ +K G + VN + + A+ G +FSS
Sbjct: 94 ---QKGNQATKEALLETILSDILE----DKYGKKVSQDEVNKQYQESAQKAG---SNFSS 143
Query: 123 FLDKQGIGDNHFKQYLAIQSI 143
LD+ G + +K + +Q +
Sbjct: 144 MLDQYGYTQDSYKNLIRLQLL 164
>gi|228475889|ref|ZP_04060599.1| foldase protein PrsA [Staphylococcus hominis SK119]
gi|228270044|gb|EEK11514.1| foldase protein PrsA [Staphylococcus hominis SK119]
Length = 319
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 23/239 (9%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L K +K D+ ++ + + G + F S L +QG+ + +K+ +
Sbjct: 64 LNKILADKYKDKVDTKRIDDDIKKEEKQYGGK-DQFESMLKQQGMTLDDYKEQKRL---- 118
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
K K + EI K K + +L + + + +K
Sbjct: 119 SAYQKQLLNDKIKVSDKEI---KDDTKKAS-------HILIKVKSDSDKEGLSDKKAKAK 168
Query: 205 AEESRLRLPKDCNKLEKFAS-----KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
AE+ + + K+ NK ++ A G Y+++ + +F + L K + +
Sbjct: 169 AEKIQKEVEKNPNKFDELAKKESMDSASAKKGGSLGYVIKGQMVDKFDKALFKLKEGQIS 228
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ T+ G I + D + + LK + Q + Y K L + Y
Sbjct: 229 DIVKTEYGYHIIKANKEDDFNKQKSQLKTKIIEQKVQKNPKLLTNAY-KDLLKEYNVDY 286
>gi|148264907|ref|YP_001231613.1| hypothetical protein Gura_2867 [Geobacter uraniireducens Rf4]
gi|146398407|gb|ABQ27040.1| hypothetical protein Gura_2867 [Geobacter uraniireducens Rf4]
Length = 525
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 59/166 (35%), Gaps = 21/166 (12%)
Query: 43 RTTINGEVITDGDISK---RIALLKLQ----------KINGELEKIAVQELIVETLKKQE 89
+NG I+ + K R+ + Q + ++K A++ LI L +E
Sbjct: 45 AAKVNGTKISFDEYQKNYYRMKGIYEQIYGRSMTPEMEKQLGIKKTALESLIDNALILKE 104
Query: 90 IEKSGITFDSNTVNYFFVQHARNTG---LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
++ GI + + ++ + + + ++ L I +F++ + +
Sbjct: 105 AKRLGIDVNRDEISAEIAKMPAFQKDGVFNFDQYTQMLKANRITPQNFEESMEEDMLVKK 164
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ + + ++ +K + + + + FS + K
Sbjct: 165 -TREKIKERATVSDQDLLQAFKKQND----KIDLSFIAFSPAEVKG 205
Score = 36.9 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 4/128 (3%)
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQFQN 248
K+ + + K AEE+ +L K + G + +DL
Sbjct: 390 QKVAEEKARELAKKKAEEALAQLTKGSAVKLQETGSFGYAPTGVVPRIGTSADLMEAAFA 449
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
L + T P+ + + + + K L P K ++ ++K
Sbjct: 450 LTTAAPAAKT-PFKVGNSWYAVKLKQRTEANTADFQKSKEQLKQALLPKKQQETLDNWLK 508
Query: 307 KLRSNAII 314
+L+S A I
Sbjct: 509 ELKSKAKI 516
>gi|126734461|ref|ZP_01750208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
CCS2]
gi|126717327|gb|EBA14191.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
CCS2]
Length = 280
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/308 (12%), Positives = 87/308 (28%), Gaps = 56/308 (18%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAM---SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+L L + ++S ++A + + T+ IT G+I IA +L +
Sbjct: 1 MLKHVTFLGATAMATVLSTGAFAQDVTAETVVATVGDTEITMGEII--IARTQLPPQYAQ 58
Query: 72 LEKIAV-QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
L A+ L+ + +++Q + + G+
Sbjct: 59 LPADALFNGLVDQLIQQQLLAD--------------------------------EADGVS 86
Query: 131 DN---HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
I DV+ + +++ + + ++E+ +L
Sbjct: 87 AQIEYTLSNERRA-LIAADVITSIADNAVTEADVQTAYDARFENAEEIQEFNAAHLLVET 145
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ + RI + + ++ + G + + P F+
Sbjct: 146 EE----EAIAAKARIDEGAAFA-------DVARDVSTGPTGPNGGNLGWFGPGAMVPTFE 194
Query: 248 N-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + P+ TQ G + + R L Q E +
Sbjct: 195 EAVMGLDVGGVSEPFETQFGWHVATLLETRVQP--RPTIDDLRPQIAQELQEAAITARLD 252
Query: 307 KLRSNAII 314
+L I
Sbjct: 253 ELAEAQTI 260
>gi|148977892|ref|ZP_01814445.1| peptidyl-prolyl cis-trans isomerse D [Vibrionales bacterium SWAT-3]
gi|145962838|gb|EDK28110.1| peptidyl-prolyl cis-trans isomerse D [Vibrionales bacterium SWAT-3]
Length = 621
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FLDKQ 127
K + +I + L +Q+ E G+ + + ++ + +A F L +
Sbjct: 88 RKSVLDRMINDVLLEQQAESLGLRISDSQIRTMILEMPQ--FQTAGQFDQEVYQAALRRA 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G F +Y+ D+++N + E + + + IRTV S+
Sbjct: 146 GFSAESFAEYMR-----RDLMRNQLVTALQGSEFVLQGEIDTQSKLIAQTRDIRTVTLSV 200
Query: 188 PDNKLQNQGFVQKRIK 203
D + ++ +
Sbjct: 201 ADLAKDVELTDEQIEQ 216
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 67/236 (28%), Gaps = 18/236 (7%)
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I K + D TV A++ L+ E + + + + +
Sbjct: 180 IDTQSKLIAQTR-----DIRTVTLSVADLAKDVELTDEQIEQYYTENPLAY-TRPEQAKV 233
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
I L+ + E + + K T + + +L + ++ Q
Sbjct: 234 SYIELSAEALKSQLEVSDEEAQKYYQEHLDKYSTAEQRKVSHILV-----EGDDEAKAQS 288
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTT 258
+ + K + F S G ++ + P F++ Q +TT
Sbjct: 289 ILDELNAGTDFATLAEEKSDDFGSAD---VGGDLGWIERDVMDPAFEDAAFALQNVGDTT 345
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ G I + + + + + A + + E +L A
Sbjct: 346 GLVKSDFGYHIIKLDELKAPESQPYAEVAAEIKQELLDQHAVDQFYEMQTELEKVA 401
>gi|90579274|ref|ZP_01235084.1| putative peptidyl-prolyl cis-trans isomerase D [Vibrio angustum
S14]
gi|90440107|gb|EAS65288.1| putative peptidyl-prolyl cis-trans isomerase D [Vibrio angustum
S14]
Length = 630
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 77/233 (33%), Gaps = 25/233 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M ++ + + ++ F + SY + + +N + I+ +
Sbjct: 1 MMERLREGANSIWVKIILSLIIFSFVFAGVGSYLAGGNEQ-VAAKVNDKEISQRAFEQAY 59
Query: 61 A-------------LLKLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNY 104
L +++ ++ ++ + L +Q + G+ V
Sbjct: 60 QNQRNQMQQRLGDYFSTLMGDPAYVQQFRNSVLERMVNDELIEQRATELGLGVSDAQVKQ 119
Query: 105 FFVQH-ARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V A + E ++ L + GI F + + + + F+ +
Sbjct: 120 AIVAMPAFQVDGVFNNEQYNLTLRRAGISPEQFAESIRKDML-----RQQFLSALEGSDF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ +++ + +E ++RT+ ++ D + ++ E+++ + +
Sbjct: 175 ALNNELNELRKLESQERVVRTLKLNLADFTDKVTVTDEEAKAYYEKNKTQFTR 227
>gi|114563758|ref|YP_751271.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
frigidimarina NCIMB 400]
gi|114335051|gb|ABI72433.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
frigidimarina NCIMB 400]
Length = 625
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 58/190 (30%), Gaps = 21/190 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + V++ F + SY + + +NG+ I ++ +
Sbjct: 1 MLEKIREGSQGIVAKTILVLVILSFAFAGVSSY-LGSNTGVPAAVVNGDEIGANELEQAF 59
Query: 59 ---RIA--------LLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R L + +++ + LI + L Q K G+ +
Sbjct: 60 QNERSRIEQQLGEMFTALAADDSYMNGIKQGVLDRLIADKLIDQAANKLGLRVSDEQIKK 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK-YGNLE 160
++ + E + + L + G F+ + + ++ + + E
Sbjct: 120 AIIEEPAFQTDGQFDNERYLAVLRQLGYQTTSFRNMMRVDMTRRQLLNALVGSEFVLDGE 179
Query: 161 MEIPANKQKM 170
+ A Q
Sbjct: 180 AKQLAEVQGQ 189
>gi|229196551|ref|ZP_04323295.1| Foldase protein prsA 1 [Bacillus cereus m1293]
gi|228586907|gb|EEK44981.1| Foldase protein prsA 1 [Bacillus cereus m1293]
Length = 288
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 101/313 (32%), Gaps = 52/313 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G V T+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L ++ + + +++ K +E +K V + N + E L
Sbjct: 58 TLYQMVLSKALLDKYKVSDEEAKK--------KVEEAKDKMGENFKATLEQLG--LK--- 104
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 -NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK-- 148
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
K +K+ ++ +D L K S+ G+ +F
Sbjct: 149 ------DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEF 198
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + P T G I + DK++L +K + +++ ++
Sbjct: 199 EEAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWK 258
Query: 305 ---VKKLRSNAII 314
V +L +A I
Sbjct: 259 QQVVNELLKDADI 271
>gi|326791007|ref|YP_004308828.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
lentocellum DSM 5427]
gi|326541771|gb|ADZ83630.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
lentocellum DSM 5427]
Length = 246
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 77/239 (32%), Gaps = 44/239 (18%)
Query: 38 MSSRIRTTINGEVITD---GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
M +++ ++G I D+ + I +Q + E +K V EL+++ L + K G
Sbjct: 1 MENKVLAVVDGRAIKQSDLYDLLRSIGQNAMQFQSEEGQKQLVDELVMQELLYSDAIKHG 60
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ E+F++ L++ + L Q ++++
Sbjct: 61 LD-------------------KEEEFTAALEQ-------MTKSLLKQYAMGKLLESVTAS 94
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E Q + + +L + + + ++ + AE
Sbjct: 95 DEEVKEYYETHQGQFKSDEAAK---ANHILVATLEEAEKVAEEIKAGLSFAEA------- 144
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272
+K+++ G + P+F+ S + P TQ G I +
Sbjct: 145 ----AKKYSTCPSASQGGALGEFTRGRMVPEFETAAFAMSPGEISAPVQTQFGYHIIEL 199
>gi|295401098|ref|ZP_06811072.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|312112126|ref|YP_003990442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
Y4.1MC1]
gi|294976891|gb|EFG52495.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217227|gb|ADP75831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacillus sp.
Y4.1MC1]
Length = 278
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 98/307 (31%), Gaps = 49/307 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + + V +S S S I T +G+ IT + + + K
Sbjct: 1 MKKWMIAAAVASVFALSACSNGDSEVIVKTKDGD-ITKEEFYNEM--------KARVGKE 51
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+++L+ E + ++ + ++ + + + + G + +
Sbjct: 52 VIRDLVHEKVLSKKYK-----VTDKEIDKEIENL---KDMYGVQYDLVVQQNG--EKAIR 101
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + D + L+ K K++ +L + +
Sbjct: 102 DMVKLDLLRQKAAMEDIKVTDKELKDYYENYKPKIRA--------SHILVKDEKTAKEIK 153
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKK 252
+ K +D KL K S+ + G + + + +F++ K
Sbjct: 154 AKLDK------------GEDFAKLAKQYSQDPGSASNGGDLGWFGQGKMVKEFEDAAYKL 201
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-----SAQNTPTKIEKHEAEYVKK 307
++P T+ G I + DK + +K + ++ P K++ + VK
Sbjct: 202 KVGEISDPVKTEYGYHIIKVTDKEEKKPFNEMKEEIEFEVKRSKLDPAKMQAKVEKLVKD 261
Query: 308 LRSNAII 314
+ A I
Sbjct: 262 --AKADI 266
>gi|325568277|ref|ZP_08144644.1| peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus
ATCC 12755]
gi|325158046|gb|EGC70199.1| peptidyl-prolyl cis-trans isomerase [Enterococcus casseliflavus
ATCC 12755]
Length = 344
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 61/206 (29%), Gaps = 21/206 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L+ + + + + SS T+ G IT D + +
Sbjct: 1 MKKKLILVAVSAMSLFALAACGNSSEEIATMKGGKITVQDFYDKAK-------TSTENQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A++E+IV + EK G ++ F A G S + F S L G ++
Sbjct: 54 ALREMIVLKVFN---EKYGDDVTEEMIDEQFNNVAEQYGGS-DSFESTLTASGYTVKSYR 109
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L Q ++ + ++ + + +
Sbjct: 110 AELKQQLA----LREGLKANMDITDEDMKTAWDSFHP------EVEAQIIKVASEDDAKD 159
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + DA+ + K + K
Sbjct: 160 VLEEAKKDDADFGEIAKEKSTDAATK 185
>gi|257866945|ref|ZP_05646598.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
casseliflavus EC30]
gi|257873278|ref|ZP_05652931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
casseliflavus EC10]
gi|257877021|ref|ZP_05656674.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
casseliflavus EC20]
gi|257801001|gb|EEV29931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
casseliflavus EC30]
gi|257807442|gb|EEV36264.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
casseliflavus EC10]
gi|257811187|gb|EEV40007.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
casseliflavus EC20]
Length = 344
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 61/206 (29%), Gaps = 21/206 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L+ + + + + SS T+ G IT D + +
Sbjct: 1 MKKKLLLVAVSAMSLFALAACGNSSEEIATMKGGKITVQDFYDKAK-------TSSENQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A++++IV + EK G ++ F A G S + F S L G ++
Sbjct: 54 ALRQMIVLKVFN---EKYGDDVTEEMIDEQFNNVAEQYGGS-DSFESTLTASGYTVKSYR 109
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L Q ++ + E+ + + +
Sbjct: 110 AELKEQLA----LREGLKANMDITDEEMKTAWDSFHP------EVEAQIIKVASEDDAKD 159
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + DA+ + K + K
Sbjct: 160 VLEEAKKDDADFGEIAKEKSTDAATK 185
>gi|89891028|ref|ZP_01202536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium BBFL7]
gi|89516672|gb|EAS19331.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium BBFL7]
Length = 453
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/297 (9%), Positives = 82/297 (27%), Gaps = 19/297 (6%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK-IAVQELIVETLKK 87
P + + + + VI + DI K+I ++ + GEL ++ ++ E +
Sbjct: 22 PAPVVQVRELIDGVSGVVGDYVILNSDIKKQILEIQGDQDLGELSDCQLIESILREKMFA 81
Query: 88 QEIEKSGITFDSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ IT V + G + +
Sbjct: 82 HHAVQDSITVSDQEVEAETDQRIAYFKGILGSDEAVLKKYQKSSMPELRSALNRITRDMK 141
Query: 144 WPDVVKNDFMLKYGNLEMEIPA----NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
++ + E+ + + + E + ++ ++ + V
Sbjct: 142 LAQRMQQRITEEVEITPEEVREFFYDLPEDERPLFNTEVEMAQIVVKPKPSEDAIKDVVD 201
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-----KSQ 254
K + + L S+ DV+ + ++ F K ++
Sbjct: 202 K-LNEYRTDVLENGASFAAKAALFSE--DVATERQGGIISLKRGDPFVKEFKEAAFSLTE 258
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P+ T G + + + ++ + + + + ++R
Sbjct: 259 GEVSEPFETVFGWHILKVEKVKGQVRDVRHILLYPYISVAQVNDAKQK--LDEMRDR 313
>gi|294101095|ref|YP_003552953.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminobacterium
colombiense DSM 12261]
gi|293616075|gb|ADE56229.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminobacterium
colombiense DSM 12261]
Length = 282
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 88/307 (28%), Gaps = 62/307 (20%)
Query: 21 VLIIFCIVPIVSYKSWAMS--------SRIRTTINGEVITDGDISKRIALLKLQKI---- 68
+LI I+ V A + ++ + I D+ I L Q+
Sbjct: 7 LLIAMAIIATVVLSGVAGAKEVEKSDGDKVLAQVGDVEIKGQDVEDVIKSLDPQQRMYYE 66
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
N + K ++ELI + + +++ + D + + L
Sbjct: 67 NEQGRKAILEELINLEVFVRWAQENDVEKDPIFIER-LENI-KREILRQVALEKMFGNVS 124
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ + + Y + IP + +L
Sbjct: 125 VSEKEARDYYTAH----------------VTDFMIP-----------SQIRASHILV--- 154
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+N+ ++ ++ + ++ + +K++S G Y + P+F
Sbjct: 155 ----ENEEEAKRIREEIKTEKITFE---DAAQKYSSCPSKAQKGDLGYFQSDQVVPEFSQ 207
Query: 249 LLKK-SQNNTTNPYVTQKGVEYIAICDKRDLG----------GEIALKAYLSAQNTPTKI 297
+ + P +Q G I + DK+ E L AQ +
Sbjct: 208 AAGALKKGEISAPVKSQYGWHIIRLEDKKPGSLQPFEEVKGQIETNLLREKRAQIYTDET 267
Query: 298 EKHEAEY 304
E+ +Y
Sbjct: 268 ERLRKQY 274
>gi|197121763|ref|YP_002133714.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
gi|196171612|gb|ACG72585.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
Length = 524
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/336 (13%), Positives = 85/336 (25%), Gaps = 68/336 (20%)
Query: 46 INGEVITDGDISKR----IALLKLQKINGELEK---------IAVQELIVETLKKQEIEK 92
+NG+ I+ D ++ + + Q G + A+ L L QE +
Sbjct: 51 VNGKSISAADFERQYENLLRFYQQQAGEGFTRELAAQLGLGRQALGVLEDRELALQEARR 110
Query: 93 SGITFDSNTVNYFFVQH----------------ARNTG-LSAEDFSSFLDKQ-------G 128
G+ V+ Q A S +F + + G
Sbjct: 111 RGVVVTDREVSEAVHQMPAFQENGQFRYETYLEAVRANYGSPGNFEAAVRDDLLYQKILG 170
Query: 129 IGDNHFK---QYLAIQSIWP------DVVK---NDFMLKYGNLEMEIPANKQKMKNITVR 176
K + Q V+ + + + A K
Sbjct: 171 ALVETVKVPATEVRAQWAASADRASLQFVRFPVAAAQAEVKVPDADAKAFADKEGARVEA 230
Query: 177 EY-------------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Y +R VL + ++ ++ D +R++ +D K+
Sbjct: 231 FYKENADRYDPKAKVHVRHVLARLAPGASADEEAAARKKIDEAAARVKKGEDFAKVAAAL 290
Query: 224 SKIHDV--SIGKAQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI---AICDKRD 277
S + G ++ E + L + P T G I + R
Sbjct: 291 SDDPNTKDRGGDLGFVSEGLADAAFAKAALALKAGEVSEPVRTPAGWHLIRADEVVPARK 350
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ E A + + E + A
Sbjct: 351 VTLEAARLDIARELLARDRAQALAREKAQAALDAAR 386
>gi|296101563|ref|YP_003611709.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295056022|gb|ADF60760.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 623
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/324 (14%), Positives = 108/324 (33%), Gaps = 40/324 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ + + + +++ F + + SY ++ +NG+ I+ G
Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANY-AAKVNGQEISRGQFENAF 59
Query: 61 A--LLKLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
A ++Q+ G+ L + + LI E L Q +K G+ V
Sbjct: 60 AGERNRMQQQLGDQFSELAANEGYMKTLRQQTLNRLIDEALLDQYAKKLGLGISDEQVKK 119
Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
N ++S +++ G+ + + Q L Q ++ +
Sbjct: 120 AIFSTQAFQSNGKFDNARYNSIVNQMGMTADQYAQALRNQLTTQQLINA-----VVGTDF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR--LRLPKDCNKL 219
+ ++ + ++ ++R + N ++++ DAE + +
Sbjct: 175 MLKGETDELAALVAQQRVVRQATIDV------NALAAKQQVSDAEVNAWYEQNKNSFVAP 228
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
E+F + A L E+ + Q+ + Q+ T P + V I K +
Sbjct: 229 EQFRVSYIKL---DAAALQETATDAEIQSYYDQHQDQFTQPQRNRYSV----IQTKTEAD 281
Query: 280 GEIALKAYLSAQNTPTKIEKHEAE 303
+ L + T + +
Sbjct: 282 AKAVLDELNKGADFATVAKAKSTD 305
>gi|228985422|ref|ZP_04145581.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228774375|gb|EEM22782.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 288
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 102/313 (32%), Gaps = 52/313 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G V T+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L ++ + + +++ K +E +K V + N + E L
Sbjct: 58 TLYQMVLSKALLDKYKVSDEEAKK--------KVEEAKDKMGENFKATLEQLG--LK--- 104
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 -NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK-- 148
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
K +K+ ++ +D L K S+ G+ +F
Sbjct: 149 ------DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEF 198
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + P T G I + DK++L +K + ++++ ++
Sbjct: 199 EEAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQETTGKWK 258
Query: 305 ---VKKLRSNAII 314
V +L +A I
Sbjct: 259 QQVVNELLKDADI 271
>gi|262039460|ref|ZP_06012764.1| foldase protein PrsA [Leptotrichia goodfellowii F0264]
gi|261746527|gb|EEY34062.1| foldase protein PrsA [Leptotrichia goodfellowii F0264]
Length = 607
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 59/183 (32%), Gaps = 26/183 (14%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-------RIALLKL 65
I L+ + + +++ + + ++ +NGE I D+ K R+ +
Sbjct: 15 IALIIAFALSMVYAGWNFLKNNVFIERKKVIAEVNGEKIYADDMEKSYADLSSRLDSIVA 74
Query: 66 QKINGE-----------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
Q+ L + ++ LI + L + + S ++
Sbjct: 75 QRKQQIAQLGGNPDNFKSLPEELLREYLLKGLIDQKLLLSSAKDLKVKVSSADIDKIVEN 134
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
+ G E+F L G +K+++ + + V + E+ +
Sbjct: 135 DQKQAGGK-ENFIRLLGTNGYNLTTYKEFIRDKMLLEK-VAEKIESSSKISDEELKKAYE 192
Query: 169 KMK 171
+ K
Sbjct: 193 RYK 195
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 230 SIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ G+ + S + P+F +KK+ + P TQ G I + DK + A +++
Sbjct: 421 NGGQLGVIDLSGMVPEFAEAVKKAEKGKIVGPVKTQFGYHIIYVEDKDSSNSDKAKVSHI 480
Query: 289 SAQNTPTKIEKHEAEYVKKLR 309
TP+ E + E +KK++
Sbjct: 481 L--LTPSVSEATKQELIKKMK 499
>gi|209520345|ref|ZP_03269110.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
gi|209499219|gb|EDZ99309.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
Length = 250
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 89/260 (34%), Gaps = 27/260 (10%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
D+ + I LLKL L +++++ + L +K G+ ++ + Q R G
Sbjct: 13 DVDEFIRLLKLTGQFESL----IEQIVRDKLTVHAAKKQGLAVTADEIQQRADQFRRVRG 68
Query: 115 L-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
L A D + +LD + + F+ ++ + K + E+ A +
Sbjct: 69 LHRAADMNHYLDALHVSLDEFEVFITDGL---------YQEKMLD-EVGNDAAIHDYFAL 118
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIG 232
++ V + DN+ + + + D P ++ + S S G
Sbjct: 119 NSPKFDAIEVSHIVLDNEGKAKEMISYLHDD--------PDSFAEMAREHSIADTRESGG 170
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLS 289
+L L P + + + P+ + + E A+ K + + +
Sbjct: 171 VIGKVLRGSLKPDIEAKIFNAAVGDLLGPFPSVDRSCFEIFAVTAKYPATLDADVATEIR 230
Query: 290 AQNTPTKIEKHEAEYVKKLR 309
+ + E+V + R
Sbjct: 231 RLLRESWLIARAQEHVIEAR 250
>gi|118445143|ref|YP_879240.1| peptidil-prolyl cis-trans isomerase [Clostridium novyi NT]
gi|118135599|gb|ABK62643.1| peptidil-prolyl cis-trans isomerase [Clostridium novyi NT]
Length = 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 91/283 (32%), Gaps = 43/283 (15%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +++ T+NG IT+ DI + I ++ + ++L+ + + + G
Sbjct: 1 MENKVLATVNGREITENDIQESIKRFPKEQQAYLATEQGKKQLLEQLISFEVFYNYGKEM 60
Query: 98 DSNTVNYFFV--QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + + + L+ + L + ++
Sbjct: 61 EYDKTKEYTTAIEIMERDALTQLSVNKVLSQ---------------------------VE 93
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+E N K + + +L + + K + + ++ +
Sbjct: 94 LTDKEVEDYYNANKSNFVVGEMISAKHILV--------DTEELAKEVAEEIKNGMTFG-- 143
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICD 274
+ K+++ G + + P+F+ + P TQ G I + +
Sbjct: 144 -DAATKYSTCPSKAQGGNLGKFGKGQMVPEFEEAAFNLEIGKVSEPVKTQFGYHLIQVEE 202
Query: 275 KRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K++ + +K + + + A V++L+ +
Sbjct: 203 KQEATEKSFDEVKDLIRTNLLQERQKVKYATTVEELKKKYNVE 245
>gi|157369342|ref|YP_001477331.1| peptidyl-prolyl cis-trans isomerase D [Serratia proteamaculans 568]
gi|157321106|gb|ABV40203.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Serratia
proteamaculans 568]
Length = 627
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+VI + + + ++Q+ G+ + A+ +LI L
Sbjct: 41 AAKVNGQVIERAQLEQAFQSERSRMQQQLGDQFSALAGNEGYMQQMRHQALSQLIDNMLL 100
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q +K G++ + V + N + + + G ++F Q + Q +
Sbjct: 101 DQYAKKLGLSVSDDQVKEAIRKAPYFQTNGQFDNAKYLDLISRMGYTADNFAQSMRQQLV 160
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
V++ +G +PA Q M + +++ +R
Sbjct: 161 NQQVIQA-----FGGSGFILPAEAQDMTALVLQQRDVR 193
>gi|92114164|ref|YP_574092.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter
salexigens DSM 3043]
gi|91797254|gb|ABE59393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chromohalobacter
salexigens DSM 3043]
Length = 602
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 9/147 (6%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDISKRIALLKLQ-K 67
K++ ++ + S T+NGE I + + + I ++ +
Sbjct: 14 AKMIVGAIIVTFALFGAESLVGVFTSGSDDIATVNGEPIKRQAVELQVQRGIRSGQVPPE 73
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA----RNTGLSAEDFSSF 123
EL + ++I L Q E+ G+ ++ V S E FS+
Sbjct: 74 QERELRAQVIDQMITTELLDQYAEEGGMHLSDAQIDQLIVSRPEFQDSEGNFSQELFSNR 133
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKN 150
L G F++ L + +
Sbjct: 134 LASAGYTPLSFRRELRRDMKRQQLQQG 160
>gi|188996999|ref|YP_001931250.1| hypothetical protein SYO3AOP1_1079 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932066|gb|ACD66696.1| hypothetical protein SYO3AOP1_1079 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 13/155 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
M K+ S I L T F + IV I+ YK + + +NG+ I +
Sbjct: 1 MFDKISQSKWKNIVLFITVFAFVATSIVAIIVYKLSGEINGV-AEVNGKEIPFYEFNYAY 59
Query: 57 ---SKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
++ + + L + + +++K V +LI + L QE EK GIT S V ++ +
Sbjct: 60 EMTARNMQMQNLDISNLKDQIKKEVVNDLIEKELLYQEAEKEGITATSEQVKNEILKISA 119
Query: 112 ---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
N + + ++ G+ + F+ L +
Sbjct: 120 FQVNGKFDKQTYLQIINSFGLTPDAFENILRKELS 154
>gi|124267144|ref|YP_001021148.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein
[Methylibium petroleiphilum PM1]
gi|124259919|gb|ABM94913.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein
[Methylibium petroleiphilum PM1]
Length = 640
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/399 (12%), Positives = 103/399 (25%), Gaps = 103/399 (25%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKL 65
S + ++ + V F + Y + + + + G IT + D + R + +L
Sbjct: 7 SHTRLLQFILVLLVFPAFVFFGVQGYTGMSEGNAVVAKVAGTSITQAEWDAAHRNQVERL 66
Query: 66 QKING----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-----HA 110
+ + E ++ + L+ E + +K +T + F
Sbjct: 67 RAQSPGVDLKLFDTPEAKQRTLDALVRERVMLVAADKLHLTASDERLQRVFASDPQLAFL 126
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-------------------- 150
R S + L QG+ F+Q L V++
Sbjct: 127 RKPDGSLN--ADVLAAQGMSARQFEQQLRQDLAMRQVLQGVSGTVLAPSRPTSTALDALL 184
Query: 151 -------------DFMLKYGNLEMEIPANKQKMKNITVRE-------------------- 177
F+ K + +I A + ++ E
Sbjct: 185 QQREVRIARFEAQKFVTKVNVTDADIEAYYKDGRHAAEFETPEQASIEYLVLDLDAIKSG 244
Query: 178 -----------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Y + P+ + + ++ + E R + L A K
Sbjct: 245 LTVSDDDLRKYYAENESRYVAPEERRASHILIKAEKGASAEQREKARTKAATLLAEARKD 304
Query: 227 ----------------HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
V G + + F++ + + G
Sbjct: 305 PAKFAELAKKNSEDPGSAVQGGDLDFFARGAMVKPFEDAAFALKPGQLSEVVESDFGYHV 364
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKK 307
I + R GGE + A+ K + + Y +
Sbjct: 365 ILLTAVR--GGEKKAFESVKAEIENEVKQQLAQRRYAEA 401
>gi|283784267|ref|YP_003364132.1| peptidyl-prolyl cis-trans isomerase D [Citrobacter rodentium
ICC168]
gi|282947721|emb|CBG87276.1| peptidyl-prolyl cis-trans isomerase D [Citrobacter rodentium
ICC168]
Length = 624
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/333 (13%), Positives = 87/333 (26%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDIS-----KRIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+ I+ G +R + + L + + LI E L
Sbjct: 42 AAKVNGQEISRGQFENAFNGERNRMQQQLGDQYSELAANEGYMKTLRQQTLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQHAR-----------------NTGLSAEDFSSFLDKQ-- 127
Q + + V G++A+ ++ L Q
Sbjct: 102 DQYARELKLGISDEQVKQAIFSTPAFQVDGKFDNNHYNALVIQMGMTADQYAQALRNQLT 161
Query: 128 ------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
G+ F + V + + + + A +Q + Y
Sbjct: 162 TQQLINGVAGTDFMLKGETDELAALVSQQRVVREATIDVQALAAKQQATEQEVASYYEQH 221
Query: 182 TVLFSIPDN-----KLQNQGFVQKRIKDAEE--------------SRLRLPKDCNKLEKF 222
F P+ + +QK + DA+ R R K E
Sbjct: 222 KNNFMTPEQFRVSYIKLDAAAMQKPVTDADVQSYYDQHQDEFTQPQRSRYSIIQTKTEDE 281
Query: 223 ASKIHDV----------------------SIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A + D + G +L E+ + + +N K + +
Sbjct: 282 AKAVLDALNKGGDFATLAKEKSADIISACNGGDMGWLEEATMPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + D + ++ +IA K
Sbjct: 342 IKSSVGFLIARLDDVQPAKVKPLSEVHDDIAAK 374
>gi|149192497|ref|ZP_01870682.1| peptidyl-prolyl cis-trans isomerse D [Vibrio shilonii AK1]
gi|148833670|gb|EDL50722.1| peptidyl-prolyl cis-trans isomerse D [Vibrio shilonii AK1]
Length = 432
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 70/183 (38%), Gaps = 9/183 (4%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + +I + L +Q E G+ + ++ + + + + L + G
Sbjct: 88 RKSVLDRMINDVLLEQHAESLGLRISDAQIRQMILEMPQFQNDGKFDQDIYQATLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +YL D+V+N + E +P+ + + + I+T+ S+ D
Sbjct: 148 SADSFAEYLR-----RDLVRNQLLTALQGSEFTLPSEIELQSKLLTQTRDIKTLTLSLAD 202
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ Q ++ K EE+ + + +++ ++ ++ + + ++ +
Sbjct: 203 FSKKAQITDEEIQKYYEENPGQFTRP-EQVKVAYIELSAQALKDQVKVTDDEIQKYYDEH 261
Query: 250 LKK 252
L K
Sbjct: 262 LDK 264
>gi|110834075|ref|YP_692934.1| peptidyl-prolyl isomerase [Alcanivorax borkumensis SK2]
gi|110647186|emb|CAL16662.1| peptidylprolyl isomerase [Alcanivorax borkumensis SK2]
Length = 643
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L + +++ + I +L +++L+KQ T V F+ + + E+F
Sbjct: 176 LNEQRRLGEQSRDIRYVQLDIDSLRKQ------FTVSDEDVKAFYDDNQGEF-MRPEEFK 228
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+ + + + +++ + V+ ++ ++ +E + ++ +
Sbjct: 229 --VSYVELSADKYTDQVSVT---DEEVEAEYDVRKSIMEEAGAGDARR---------HVS 274
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLES 240
+L + D++ +Q + ++A ++ + +++ + S G+ + +
Sbjct: 275 HILIELNDDRDLDQAKAR--AREAAKAIADGASFADVAAQYSDDLGSAQSGGELGVVSKG 332
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
L + + + + S + P VT GV I + + D + A LS Q +
Sbjct: 333 ALPEEMETAIAELSPGTVSAPVVTDAGVHLIFVT-QEDTATALPSLADLSDQIRADLTKA 391
Query: 300 HEAEYVKK 307
+ +
Sbjct: 392 RAESLLNE 399
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 20/184 (10%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI----ALLKLQKINGELE- 73
+++ F I Y + + + G IT G +++R+ +L+ Q N
Sbjct: 18 AAIILPFVISGFYGYFVGGSTGDVVAEVEGSKITRGVVNQRVERVRNMLREQSPNMNPAL 77
Query: 74 -------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSF 123
++ + ++ E L E+S + F V + + S + F
Sbjct: 78 LDSFVRPEMVLDGIVNEQLILSAAEQSNMVFSEKQVAADIYKVPLFQVDGKFSEQRFERE 137
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
L +G+ + Q L + K F + + +P + + + + IR V
Sbjct: 138 LRARGMNPQTYVQGLRQDML-----KEQFRAGFMQTDFSLPLELNEQRRLGEQSRDIRYV 192
Query: 184 LFSI 187
I
Sbjct: 193 QLDI 196
>gi|15604429|ref|NP_220947.1| protein export protein PRSA precursor (prsA) [Rickettsia prowazekii
str. Madrid E]
gi|20138858|sp|Q9ZCX6|PLP_RICPR RecName: Full=Parvulin-like PPIase; AltName: Full=29.5 kDa outer
membrane antigen; AltName: Full=Peptidyl-prolyl
cis-trans isomerase plp; AltName: Full=Rotamase plp;
Flags: Precursor
gi|3861123|emb|CAA15023.1| PROTEIN EXPORT PROTEIN PRSA PRECURSOR (prsA) [Rickettsia
prowazekii]
gi|4581486|emb|CAA61657.1| parvulin, PPIase-like protein [Rickettsia prowazekii]
gi|10303401|emb|CAC10161.1| parvulin-like PPIase [Rickettsia prowazekii]
gi|292572198|gb|ADE30113.1| Parvulin-like peptidyl-prolylisomerase [Rickettsia prowazekii Rp22]
Length = 282
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 93/305 (30%), Gaps = 52/305 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------ 74
+ +IF V ++S ++ ++ T G + + I + +L +GE K
Sbjct: 4 LSVIFLSVSMLSSIAFGDEDKVVATYKGGEVKESQIMQEFK-PQLNLQSGETIKNFDDFP 62
Query: 75 -IAVQELI----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++LI L K+E+ KS IT S L+ ++ + K I
Sbjct: 63 LQDQEKLIKIYVNNLLLKEEVAKSSIT-SSKEFQEKLEN--AKNQLAQQELLANYIKSNI 119
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
D F N ++ E + + +L
Sbjct: 120 TDKMFDDEY-----------NKYVDNLKGKE----------------QIKVAHILVK--- 149
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248
++ + K K ++L +K + IG L P+F Q
Sbjct: 150 SQKEANTVKTKLSKGGNFTKLAEEFSLDKAT----ASNGGIIGYIILNQPGQLVPEFEQK 205
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
N + P T G I + +K+ + I K + +Y+ L
Sbjct: 206 AFALKVNEVSTPVKTSFGWHIIKVLEKKPVP--IPTKEEAKVTIDNILAAEILKQYISDL 263
Query: 309 RSNAI 313
+ A
Sbjct: 264 EAKAD 268
>gi|254560598|ref|YP_003067693.1| cell-binding factor 2 [Methylobacterium extorquens DM4]
gi|254267876|emb|CAX23742.1| putative cell-binding factor 2 precursor (Major antigen peb4A),
cbf2 [Methylobacterium extorquens DM4]
Length = 300
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 86/280 (30%), Gaps = 46/280 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ +NG+ IT D++ A + G E L+ + + ++
Sbjct: 47 ETVVARVNGQAITAADLAI-AAEDPALSLPGVDEGAKQNLLVDYMVDLKVGAQA------ 99
Query: 100 NTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
A + + A +F L F+ L + K +
Sbjct: 100 ----------AESAKVGDAPEFKRKLAY-------FRDKLLLDDYLEREAKKAVTPEAAK 142
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E K + E R +L +++ +K +R++ +D K
Sbjct: 143 ALYEQTVKSMKPEE----EVRARHILV-------ESEDEAKKI-----AARVKGGEDFAK 186
Query: 219 LEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ SK G + + + F + K + ++P TQ G + + +K
Sbjct: 187 IAGEVSKDPGSKTEGGDLGWFSQERMVKPFADAAFKMAPGQVSDPVKTQFGWHVLRVEEK 246
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + + Q K + + + KLR A +
Sbjct: 247 RTKP--VPTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 284
>gi|228939473|ref|ZP_04102061.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972327|ref|ZP_04132938.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978940|ref|ZP_04139306.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228780814|gb|EEM29026.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228787344|gb|EEM35312.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820173|gb|EEM66210.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 293
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 131 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKEKIRKDLEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|229127713|ref|ZP_04256702.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
gi|228655790|gb|EEL11639.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
Length = 293
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ KN E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KNNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L S+ G+ +F+ K ++P T G I
Sbjct: 170 DFAALANQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|221633228|ref|YP_002522453.1| putative post-translocation molecular chaperone [Thermomicrobium
roseum DSM 5159]
gi|221156643|gb|ACM05770.1| putative post-translocation molecular chaperone [Thermomicrobium
roseum DSM 5159]
Length = 464
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 58/198 (29%), Gaps = 33/198 (16%)
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ L++ G+ F++ + + + V+ LE IP +
Sbjct: 250 KNVLEQAGLSLADFQRLVVRPMLAREKVQ-------RVLEERIPLR--------AEQIHA 294
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+L + + Q +Q A +R R + G +L
Sbjct: 295 AHILLATREAAEQALADIQGGADFATIARERSIDS----------DTAPNGGDLGWLPRG 344
Query: 241 DLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ F + + P TQ G + + ++ + L + +
Sbjct: 345 YMPSAFDEVAFALAPGEVGGPVQTQYGWHIVKVLERDP---DRPLSERMLQALRGQALS- 400
Query: 300 HEAEYVKKLRSNAIIHYY 317
++ + R + I ++
Sbjct: 401 ---RWLDEQRRTSTIRWH 415
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 33/97 (34%)
Query: 41 RIRTTINGEVITDGD------------ISKRIALLKLQKINGELE-----KIAVQEL--- 80
++ +NGE IT D IS+ L L ++ A Q+L
Sbjct: 66 QVVVEVNGEPITRADYWKMRRLELLNQISQYQQLANLMSGQQSVQYQQLADQARQQLTTV 125
Query: 81 -------------IVETLKKQEIEKSGITFDSNTVNY 104
I + L Q + + G+ D V
Sbjct: 126 ERDPINQATVGQMIDDRLVLQRMGQLGVALDEREVED 162
>gi|162146617|ref|YP_001601076.1| peptidylprolyl isomerase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785192|emb|CAP54738.1| Peptidylprolyl isomerase [Gluconacetobacter diazotrophicus PAl 5]
Length = 308
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 46/271 (16%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGITFD 98
+ ++NGE I D+ + A + Q + + +LI + + +G+
Sbjct: 49 LVASVNGEDIHLNDVRQAAANMPAQLRQLPPNMIFPMLLNQLIDQKAIQAAATHAGLDKQ 108
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V A ++A +++L +Q + V+ + Y N
Sbjct: 109 P-DVQQQMHAAA----MNALQ-NAYLSQQ-VTP-TLTD---------AAVQAYYTQHYAN 151
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+ E E R +L + ++ D +L D
Sbjct: 152 KKPEA-------------EIHARHILVATEAEAKDVIKQLKA-GADFGALATKLSTDKAS 197
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDKR 276
++ + G + + D+ P F + + +T P TQ G I + D R
Sbjct: 198 AKQ--------NGGDLGWFKKGDMLPAFSDAAFAMKPHTFSQTPVHTQYGWHVIEVLDTR 249
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
++ + + I++ + V+K
Sbjct: 250 --TADVPKLDAVRDEIRQKLIQQGVRDAVEK 278
>gi|68160702|gb|AAY86797.1| lr0370 [Lactobacillus reuteri]
Length = 312
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 81/263 (30%), Gaps = 47/263 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T +G IT+ + + K +Q++I
Sbjct: 6 LIAIIAGAALMMPLAACGNKAVATTSGGKITESEYYSSMK-------QTSAGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + + ++ G VN + + G DF+++L Q + + KQ +
Sbjct: 59 LDKVLE---KQYGKEVSDKQVNAQYNTYKNEYG---ADFNAYLQSQNLTEKSLKQQIRSN 112
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + NKQ K T + ++T +
Sbjct: 113 LLLTAAAR----------HYSHITNKQINKQWTKYQPKVQTATILVGS------------ 150
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLES------DLHPQFQN-LL 250
DAE+ +L NK + F D L + L ++
Sbjct: 151 KSDAEDIINQLNDSSNKYKTFKKLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAF 210
Query: 251 KKSQNN-TTNPYVTQKGVEYIAI 272
K TT P T G + I +
Sbjct: 211 KLKTGEYTTTPVKTDDGYQVIYM 233
>gi|150011009|gb|ABR57161.1| foldase protein precursor [Staphylococcus xylosus]
Length = 329
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 84/221 (38%), Gaps = 27/221 (12%)
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+K ++ ++ + + G + F S L +Q + +K+ +Q+ +++
Sbjct: 69 ADKYKDEVNTKDIDKEVEKEQKQYGGK-DQFESMLKQQKMSLGDYKEQKKLQAYQKELLN 127
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK-RIKDAEES 208
K + EI + +K +L + +NK +G K AE+
Sbjct: 128 ----DKVDISDKEIKKDTKKG----------SHILIKVKENKDDKEGLSDKDAKAKAEKI 173
Query: 209 RLRLPKDCNKLEKFASK-----IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYV 262
+ ++ KD +K + A K G Y+++ + +F+ L K + N ++
Sbjct: 174 QKQVEKDPDKFGEIAKKESMDKSSGKKDGSLGYVIKGQMEDKFEKALFKLKEGNISDVVK 233
Query: 263 TQKGVEYIAICDKRDLGGEIALKA-YLSAQNTPTKIEKHEA 302
T G I K D + + L +Q +K++K
Sbjct: 234 TDYGYHII----KADKQDDFDKEKGKLKSQLIQSKVQKEPK 270
>gi|84684613|ref|ZP_01012514.1| PPIC-type PPIASE domain protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667592|gb|EAQ14061.1| PPIC-type PPIASE domain protein [Rhodobacterales bacterium
HTCC2654]
Length = 300
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/329 (10%), Positives = 91/329 (27%), Gaps = 67/329 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-------------IRTTINGEVIT 52
T S L + + + + + + T+NGE IT
Sbjct: 1 MTHTSTRASLFAATLLSVSLALPSWAQDAAPEAEAETDAAPAMEVTVDTVLATVNGEEIT 60
Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
G + Q+ + + LI + +++
Sbjct: 61 LGHVVA-AKEQLPQQYQQLPNDVLLPGLIDQLIQQTV----------------------- 96
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
S +D+ G G + +++ +V + + ++ A +
Sbjct: 97 -------LSQAIDEVGAGVE-----VRLENERRTLVAAEKIDDVITEAVDEDAIQAAYDA 144
Query: 173 IT-----VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
E+ +L + + + V++ + + ++F++
Sbjct: 145 QYADAEPTTEWNASHILV---ETEAEAADLVEQAKAEDADFA-------ALAKEFSTGPS 194
Query: 228 DVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G+ + + F+ + + + ++P TQ G I + + R+ G
Sbjct: 195 GPNGGELGWFSAGMMVEPFETAVADMAAGDISDPVQTQFGWHVIKLNETREKGA--PPLE 252
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ E + L A I
Sbjct: 253 EVREDIIGQLQTSAVEEALNALMDGATIE 281
>gi|297588598|ref|ZP_06947241.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516]
gi|297573971|gb|EFH92692.1| peptidyl-prolyl cis-trans isomerase [Finegoldia magna ATCC 53516]
Length = 250
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 90/284 (31%), Gaps = 46/284 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI---NGELEKIAVQELIVETLKKQEIEKSGIT 96
+I +NGE I ++ I L + N E K ELI L + +KSG+
Sbjct: 6 DKILAVVNGEEIKQSEVDNFIKALGYRGAQFNNEEGRKRLTDELINRKLLFFDAKKSGLD 65
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D V + +E+ K + I ++
Sbjct: 66 KDEIYV--------KEVKKQSEEL-------------LKDFAMANIINS--------VRV 96
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ +++ K + +L +++ +K D + + L
Sbjct: 97 SDEDLKEYYENHKDNFKVQPTFTASHILV---ESEDLANEIKEKIDNDGDFAEL------ 147
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+++++ G + + +F+N L++ + P TQ G I I DK
Sbjct: 148 --AKEYSTCPSKEQGGDLGTFQQGQMVKEFENALIENEIGDIVGPVKTQFGYHIINIKDK 205
Query: 276 RDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + K + K ++ + KL+ I +
Sbjct: 206 TEGKVKSFEEAKNEVKQTLLQLKQQQAYIDATDKLQKEYKIEKF 249
>gi|229173017|ref|ZP_04300568.1| Foldase protein prsA 1 [Bacillus cereus MM3]
gi|228610350|gb|EEK67621.1| Foldase protein prsA 1 [Bacillus cereus MM3]
Length = 288
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 101/312 (32%), Gaps = 50/312 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G V T+ ++ L+ +
Sbjct: 2 RYFELKKNKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI- 129
L ++ + + +++ K + G ++F S L++ G+
Sbjct: 58 TLYQMVLSKALLDKYK----------VSDEEAKKQVEEAKDKMG---DNFKSTLEQVGLK 104
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK--- 148
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
K +K+ ++ +D L K S+ G+ +F+
Sbjct: 149 -----DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFE 199
Query: 248 NL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY-- 304
K + P T G I + DK++L +K + +++ ++
Sbjct: 200 EAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDQIRKDLEQQRLQDTTGKWKQ 259
Query: 305 --VKKLRSNAII 314
V L +A I
Sbjct: 260 QVVNDLLKDADI 271
>gi|229115799|ref|ZP_04245201.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3]
gi|228667682|gb|EEL23122.1| Foldase protein prsA 1 [Bacillus cereus Rock1-3]
Length = 293
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 102/313 (32%), Gaps = 50/313 (15%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
S+ +L L +++ + S + T+ G V T+ ++ LK +
Sbjct: 6 SEVFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELKQKYGE 61
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L ++ + + +++ K + G ++F L+K G+
Sbjct: 62 STLYQMVLSKALLDKYK----------VSDEEATKQVKEAKDKMG---DNFKETLEKLGL 108
Query: 130 -GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 109 KNEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK-- 153
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
K +K+ ++ +D L K S+ G+ +F
Sbjct: 154 ------DEKTAKEVKE----KVNNGEDFATLAKQYSEDTGSKEQGGEIAGFGPGQTVKEF 203
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + + P T G I + DK++L +K + +++ ++
Sbjct: 204 EEAAYKLNAGQVSEPVKTSYGYHIIKVTDKKELKPFEEVKDKIRKDLEQQRLQDTTGKWK 263
Query: 305 ---VKKLRSNAII 314
V L +A I
Sbjct: 264 QQVVNDLLKDADI 276
>gi|225848384|ref|YP_002728547.1| hypothetical protein SULAZ_0557 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644127|gb|ACN99177.1| hypothetical protein SULAZ_0557 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 456
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 16/196 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISKRIALLK--LQKI- 68
K + Y F IV+ + +S I +NG I + + ++ LQ
Sbjct: 11 KNIVLYITAFAFVATSIVAVIIYKLSGEIYGAAEVNGREIPMYEFNYTYEMIGRNLQNQD 70
Query: 69 ------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAED 119
E+ K A++ LI L QE EK GI V + N
Sbjct: 71 IDITPFKKEIAKQAIETLIENELLYQEAEKEGIVATKEQVKEELLNIPAFQVNGKFDKNT 130
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-NKQKMKNITVREY 178
+ ++ G+ F+ L Q ++ ++ + + E+ K+++ I+
Sbjct: 131 YIQIINSLGLTPEGFESILQKQITVNNL-RSILLSTLYVSDEEVETFTKKQLTRISGEVT 189
Query: 179 LIRTVLFSIPDNKLQN 194
LI+ +I D +++
Sbjct: 190 LIKPKEPTITDQMIKD 205
>gi|152978448|ref|YP_001344077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus
succinogenes 130Z]
gi|150840171|gb|ABR74142.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Actinobacillus
succinogenes 130Z]
Length = 624
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/393 (12%), Positives = 108/393 (27%), Gaps = 92/393 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-------- 52
+ K+ + ++++ + + F + + Y + S +NGE I+
Sbjct: 2 LMEKLHHAANNWVSKAILGAIAVSFVVSGMYGYLGSSSDSS-AVKVNGEEISQQNFQQQY 60
Query: 53 --DGD-ISKRIA--LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ + +++ L L + + LI + L +Q ++ I +
Sbjct: 61 NNEFQRLEQQLGPQFAALSDTPEFTAGLRQTVLNRLIDQELLRQYGDELNIAVSDEQIKR 120
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------- 150
V+ + S E + FL + + + QYL +
Sbjct: 121 EIVRTPEFQVDGKFSNETYQLFLRNNNLSSDTYAQYLREALRLAQLQSALTDTAFLLPAN 180
Query: 151 ------DFMLKYGNLEMEIPANKQKMKNITVRE-----YLIRTVLFSIPD---------- 189
F +P + K E Y F++P+
Sbjct: 181 QEAFAKGFFQSRAVRLAHLPLAAEIAKQTVTEEEIQNYYNSNKSAFTVPELIKVQYLDLT 240
Query: 190 ---------------------------NKLQNQGFVQKRIKDAEES----RLRLPKDCNK 218
K Q + + + E L+ D
Sbjct: 241 QAAAEKTVKVTDVEIQQYYQDHKADFTTKGQERLAHIQLANEKEALDAYEALQKGADFAT 300
Query: 219 LEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275
L K S K+ V+ G +L DL +F++ + + + P I + ++
Sbjct: 301 LAKEKSNDKVSAVNGGDLGWLNTGDLPKEFEDAATILEVGHYSTPVNVDGQFHIIQVLER 360
Query: 276 RDLG---GEIALKAY---LSAQNTPTKIEKHEA 302
+D E + + + E
Sbjct: 361 KDSALLPLEQVKERITQAIRQDLVGNQFYAMEK 393
>gi|239815915|ref|YP_002944825.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
S110]
gi|239802492|gb|ACS19559.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
S110]
Length = 261
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 48/278 (17%)
Query: 43 RTTINGEVI--TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG+ + D+ + + + E++ +E++ + QE +K G+ +
Sbjct: 27 AAIVNGKPVPKARMDVLAQQLAAAGRPVTPEMQGQLREEIVAREVFMQEAQKQGLDATDD 86
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
L LA Q+I + ++ +
Sbjct: 87 ----------YRNQL---------------------ELARQAILIRALFENYRKTSPVSD 115
Query: 161 MEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ A K + +EY R +L D + ++K K + ++ +
Sbjct: 116 AEVKAEYDKFVAANGGKEYKARHILVETEDQAKKIMADLKKGAKFEDIAKKQSKDPG--- 172
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277
+ G + + P+F ++K + TT P TQ G I + D R
Sbjct: 173 -------SGANGGDLDWANPASFVPEFSEAMIKLKKGETTPAPVKTQFGYHIIRVDDVRQ 225
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ + Q T ++ +Y ++LR+ A +
Sbjct: 226 --AQLPKLEEVQPQITQQLQQQRLQKYQEELRAKAKVE 261
>gi|332283513|ref|YP_004415424.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pusillimonas sp.
T7-7]
gi|330427466|gb|AEC18800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pusillimonas sp.
T7-7]
Length = 340
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 5/154 (3%)
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E++ K + T +Y + + P + ++K+ + + D L
Sbjct: 166 ELQAAYEANKAQFTTPAQYRVSQIFLVAPYQDAEAVAKMRKQAGELVKKARADKADFAAL 225
Query: 220 EKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
K S+ G + L P+ + + + + P +Q G + + D+R
Sbjct: 226 VKEHSQDEATAARGGDTGWAPLQQLVPEIRTSVAALDKGAVSEPIQSQAGFHILKLVDQR 285
Query: 277 -DLGGEIAL-KAYLSAQNTPTKIEKHEAEYVKKL 308
+ E+A + L + Y++ L
Sbjct: 286 APVTPELAQVQEQLREALRRQRKSTVAKAYLEGL 319
>gi|256823166|ref|YP_003147129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis
DSM 16069]
gi|256796705|gb|ACV27361.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kangiella koreensis
DSM 16069]
Length = 624
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 15/123 (12%)
Query: 43 RTTINGEVITDGDISKRIALLKLQ------------KINGELEKIAVQELIVETLKKQEI 90
+ G IT+ I +R+ ++ Q L + ++LI E + + +
Sbjct: 30 VAEVEGAEITNAQIQQRVDNVRRQMGDQFEQQYATEASQQLLRQQIKEQLISEQVLRANL 89
Query: 91 EKSGITFDSNTVN---YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
K+G+T + F SA+ L +QG + F+Q+ Q +
Sbjct: 90 TKAGLTASEQQIKAWAREFPAFQIGGVYSADQAKMILAQQGWSEERFRQFARQQIAQEQL 149
Query: 148 VKN 150
+
Sbjct: 150 EQG 152
>gi|206973718|ref|ZP_03234636.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus H3081.97]
gi|217959835|ref|YP_002338389.1| peptidylprolyl isomerase [Bacillus cereus AH187]
gi|206747874|gb|EDZ59263.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus H3081.97]
gi|217064695|gb|ACJ78945.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH187]
Length = 283
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G ++F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKQVEEAKDKMG---DNFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 121 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V +L +A I
Sbjct: 220 VTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNELLKDADI 266
>gi|229096816|ref|ZP_04227786.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29]
gi|228686658|gb|EEL40566.1| Foldase protein prsA 1 [Bacillus cereus Rock3-29]
Length = 293
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 102/313 (32%), Gaps = 50/313 (15%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
S+ +L L +++ + S + T+ G V T+ ++ LK +
Sbjct: 6 SEVFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELKQKYGE 61
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
L ++ + + +++ K + G ++F L+K G+
Sbjct: 62 STLYQMVLSKALLDKYK----------VSDEEATKQVKEAKDKMG---DNFKETLEKLGL 108
Query: 130 -GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 109 KNEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK-- 153
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
K +K+ ++ +D L K S+ G+ +F
Sbjct: 154 ------DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEIAGFGPGQTVKEF 203
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + + P T G I + DK++L +K + +++ ++
Sbjct: 204 EEAAYKLNAGQVSEPVKTSYGYHIIKVTDKKELKPFEEVKDKIRKDLEQQRLQDTTGKWK 263
Query: 305 ---VKKLRSNAII 314
V L +A I
Sbjct: 264 QQVVNDLLKDADI 276
>gi|87121304|ref|ZP_01077194.1| peptidyl-prolyl cis-trans isomerase D, putative [Marinomonas sp.
MED121]
gi|86163461|gb|EAQ64736.1| peptidyl-prolyl cis-trans isomerase D, putative [Marinomonas sp.
MED121]
Length = 611
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/320 (13%), Positives = 105/320 (32%), Gaps = 30/320 (9%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKL 65
+ + F+++ F + + + + +S ++G IT ++ + R L+ +
Sbjct: 11 GIVVKIIIGFIVVTFALFGVDALVTGFTTSDTVAEVDGVEITRTELLQSAEIQRRQLISM 70
Query: 66 QKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTG 114
+ L++ A+ ELI + + V+ + Q +
Sbjct: 71 MGGQIDPALLEDTLLQRRALDELIQRAVLTNNANDLNLAVSDAQVDQYLIQAEQFQTDGQ 130
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ +F+ G FKQ + + + L ++ +
Sbjct: 131 FDQTKYLNFIRTLGYTPLAFKQRIKQDILLQQG-RIALSSSEFVLSNQVDQVLKLQNQQR 189
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+Y + +S+ D Q + +E+ ++ +++ I V
Sbjct: 190 SYDY----IRYSLADEVALTQVSDTEIQAYFDENTQSF-QNPEQVKLDYVIISSVDFHDK 244
Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEIALKAYLSAQ-N 292
+ ++L +Q +T P ++ I D+R AL + ++ +
Sbjct: 245 VNVSSAELEQAYQ------AATSTAPKEERRASHILIEANDQRSDEEARALAQDIKSKID 298
Query: 293 TPTKIEKHEAEYVKKLRSNA 312
+ TK E +Y L S A
Sbjct: 299 SGTKFEALAKQYSDDLGSKA 318
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 90/259 (34%), Gaps = 26/259 (10%)
Query: 57 SKRIA---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
+RI LL+ +I + + + + LK Q ++ + + Y T
Sbjct: 151 KQRIKQDILLQQGRIALSSSEFVLSNQVDQVLKLQNQQR-----SYDYIRYSLADEVALT 205
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+S + ++ D+ + + + + + V F K E+ Q +
Sbjct: 206 QVSDTEIQAYFDENTQSFQN-PEQVKLDYVIISSVD--FHDKVNVSSAELEQAYQAATST 262
Query: 174 TVRE-YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD---- 228
+E +L D + + A++ + ++ K E A + D
Sbjct: 263 APKEERRASHILIEANDQRSDEEA-----RALAQDIKSKIDSGT-KFEALAKQYSDDLGS 316
Query: 229 -VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ G Y+ + P+F+N+L + + T+ G I + + ++ + A
Sbjct: 317 KAAGGDLGYVSSGMMVPEFENVLFSMVVDQVSGVVETEFGYHLIELREITNV--DTPSLA 374
Query: 287 YLSAQNTPTKIEKHEAEYV 305
+ + T +++ + +
Sbjct: 375 EMEPELTQEILDRKAQDAL 393
>gi|229155916|ref|ZP_04284017.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342]
gi|228627523|gb|EEK84249.1| Foldase protein prsA 1 [Bacillus cereus ATCC 4342]
Length = 288
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 102/313 (32%), Gaps = 52/313 (16%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ +L L +++ + S + T+ G V T+ ++ L+ +
Sbjct: 2 RYFELKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNV-TEKEL---SKELRQKYGES 57
Query: 71 ELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L ++ + + +++ K +E +K V + N + E L
Sbjct: 58 TLYQMVLSKALLDKYKVSDEEAKK--------KVEEAKDKMGENFKATLEQLG--LK--- 104
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ K+ + + + +K E ++ K+ E + +L
Sbjct: 105 -NEDELKEKMKPEIAFEKAIKA------TVTEKDV-------KDNYKPEMKVSHILVK-- 148
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
K +K+ ++ +D L K S+ G+ +F
Sbjct: 149 ------DEKTAKEVKE----KVNNGEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEF 198
Query: 247 QNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY- 304
+ K + P T G I + DK++L +K + ++++ ++
Sbjct: 199 EEAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDSIRKDIEQQRLQETTGKWK 258
Query: 305 ---VKKLRSNAII 314
V +L +A I
Sbjct: 259 QQVVNELLKDADI 271
>gi|197104227|ref|YP_002129604.1| peptidyl-prolyl cis-trans isomerase family protein
[Phenylobacterium zucineum HLK1]
gi|196477647|gb|ACG77175.1| peptidyl-prolyl cis-trans isomerase family protein
[Phenylobacterium zucineum HLK1]
Length = 318
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 84/311 (27%), Gaps = 54/311 (17%)
Query: 17 TTYFVLIIFCIVPIVSYK-----SWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN-- 69
T VL + + ++G + D+ + L
Sbjct: 9 TACLVLALAGTLAACGGNGDGDRPPERGDVAVARVDGRTVWASDVKREAVAQGLIGEGEP 68
Query: 70 ----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+L + + E++ + L E K + D A+
Sbjct: 69 LDPASDLFRRVLDEVVDQKLLAAEALKRNLDEDP---------VAQR------------- 106
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+ + + DVV + K + E R ++
Sbjct: 107 ----RLAAARDRILGDMLIEDVVADAVTENNIRGLYAEQQRVAKRQE----EIRARQIVL 158
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + A L + + + +F + G Y +
Sbjct: 159 ATEADA---EAVKKLLAAGASFEALAMERSRDPETRF-------NGGDLGYFTTDVMPEA 208
Query: 246 FQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
++ LK P+ + GV + + D+R L I L+A Q +
Sbjct: 209 YELALKTAKPGEIVGPFEVEGGVALVKVEDRR-LEQPITLEAA-RPQIVRFLTYDRIRDL 266
Query: 305 VKKLRSNAIIH 315
++KLR A I
Sbjct: 267 LEKLRGKAKIE 277
>gi|326566313|gb|EGE16464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 12P80B1]
Length = 367
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHD 228
++ +R +L + P + + + ++K+ + +S R ++++
Sbjct: 204 VSTPIMTLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSK 263
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G+ L + P+F++ + + NP T+ G+ I + K++ +AY
Sbjct: 264 DDGGELGVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAY 323
Query: 288 --LSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +Y+ +L A I
Sbjct: 324 PIIENHLKQQSFHHSLCDYLFELSQKADI 352
>gi|326561196|gb|EGE11561.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 7169]
Length = 367
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHD 228
++ +R +L + P + + + ++K+ + +S R ++++
Sbjct: 204 VSTPIMTLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSK 263
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G+ L + P+F++ + + NP T+ G+ I + K++ +AY
Sbjct: 264 DDGGELGVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAY 323
Query: 288 --LSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +Y+ +L A I
Sbjct: 324 PIIENHLKQQSFHHSLCDYLFELSQKADI 352
>gi|270263574|ref|ZP_06191843.1| putative protease maturation protein [Serratia odorifera 4Rx13]
gi|270042458|gb|EFA15553.1| putative protease maturation protein [Serratia odorifera 4Rx13]
Length = 627
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+VI + + + ++Q+ G+ + A+ +LI L
Sbjct: 41 AAKVNGQVIERAQLEQAFQSERSRMQQQLGDQFSALAGNEGYMQQMRHQALSQLIDNMLL 100
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q +K G++ + V + N + + + G ++F Q + Q +
Sbjct: 101 DQYAKKLGLSVSDDQVKDAIRKAPYFQTNGQFDNAKYLDLISRMGYTADNFAQSMRQQLV 160
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
V++ +G +P+ Q M + ++E +R
Sbjct: 161 NQQVIQA-----FGQSGFVLPSESQGMAALVLQERNVR 193
>gi|326569504|gb|EGE19564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis BC8]
Length = 367
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHD 228
++ +R +L + P + + + ++K+ + +S R ++++
Sbjct: 204 VSTPIMTLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSK 263
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G+ L + P+F++ + + NP T+ G+ I + K++ +AY
Sbjct: 264 DDGGELGVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAY 323
Query: 288 --LSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +Y+ +L A I
Sbjct: 324 PIIENHLKQQSFHHSLCDYLFELSQKADI 352
>gi|326404647|ref|YP_004284729.1| peptidyl-prolyl cis-trans isomerase [Acidiphilium multivorum
AIU301]
gi|325051509|dbj|BAJ81847.1| peptidyl-prolyl cis-trans isomerase [Acidiphilium multivorum
AIU301]
Length = 311
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 77/287 (26%), Gaps = 52/287 (18%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSG 94
+ ++G I D++K L Q N ++ + + L+ E + K+G
Sbjct: 52 QKDTVVAIVDGHDIHLSDVAKAAQDLPPQLQNAPPQELFPVLLNRLVDERALLVKARKAG 111
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
D A +A+ ++
Sbjct: 112 TAKDPK--------VAAEMKAAADQALE----------------------RAYLRALVEP 141
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K + ++ + +K E R +L + + K K
Sbjct: 142 KLTDAAVKAYYDSHYVKAKQPEEVKARQILVKTQQEAEKIIAQLGK-----------GAK 190
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAI 272
+K++ + G+ + + ++ F + T P +Q G I
Sbjct: 191 FSALAKKYSIDPGAKNGGELGWFTKDEMVKPFADAAFALKPGTYTKTPVHSQFGWHVIES 250
Query: 273 CDKRDLGGEIAL--KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
KR+ K + Q T + ++ R I +
Sbjct: 251 QGKREKPVPPLADVKDQIRQQITNKAVTAA----LEDARKGLDIKLF 293
>gi|293392541|ref|ZP_06636861.1| peptidyl-prolyl cis-trans isomerase D [Serratia odorifera DSM 4582]
gi|291424943|gb|EFE98152.1| peptidyl-prolyl cis-trans isomerase D [Serratia odorifera DSM 4582]
Length = 627
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 20/142 (14%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+VI + + R + + +L + A+ +LI L
Sbjct: 42 AAKVNGQVIERAQLEQAFQSERSRMQQQLGEQFSALAGNEGYMQQLRQQALSQLIDNMLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q +K G++ + V + N + + + G +++ Q + Q +
Sbjct: 102 DQYAKKLGLSISDDQVKDAIRKAPYFQTNGQFDNAKYLDLITRMGYSADNYAQSMRQQLL 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPA 165
V++ F L E A
Sbjct: 162 NQQVIQA-FGNSGFVLPSESDA 182
>gi|81428241|ref|YP_395241.1| peptidylprolyl isomerase [Lactobacillus sakei subsp. sakei 23K]
gi|123564491|sp|Q38XZ9|PRSA_LACSS RecName: Full=Foldase protein prsA; Flags: Precursor
gi|78609883|emb|CAI54930.1| Protein maturation protease precursor (peptidylprolyl isomerase)
[Lactobacillus sakei subsp. sakei 23K]
Length = 303
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 81/259 (31%), Gaps = 42/259 (16%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++ ++ S T+ G +T + K I K VQ++I
Sbjct: 6 LLAAASLLMVVTLAGCGSNTIATLKGGKVTQDEFYKEIK-------ETSAGKQQVQQMI- 57
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L+K E+ G + ++ + + + G S F+S L + G+ + FK + Q
Sbjct: 58 --LQKALQEQYGSKSLTKKIDKTYNTYKKQYGSS---FTSVLAQSGLTTSSFKNQITTQM 112
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ ++ K + ++ +L +K
Sbjct: 113 ----LANAALKANKKVTNADLK----KQWKTYEPKVEVQHILVE------------KKDT 152
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS-----IGKAQYLLESD--LHPQFQNLLKKSQN 255
+ S L+ A K + GK +D L P F+ K +
Sbjct: 153 AETVISELKKDNSTKNFTALAKKYSTDTGTKKDGGKLPVFDSTDTSLDPTFKTAAFKLKT 212
Query: 256 N--TTNPYVTQKGVEYIAI 272
N TT P T G I +
Sbjct: 213 NEYTTTPVKTSYGYHVIRM 231
>gi|302391506|ref|YP_003827326.1| hypothetical protein Acear_0721 [Acetohalobium arabaticum DSM 5501]
gi|302203583|gb|ADL12261.1| TPR repeat-containing protein [Acetohalobium arabaticum DSM 5501]
Length = 404
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 10/153 (6%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKIN-GELEKIAV-----QELIVETLK 86
+ A I +N + I D + + + G + +A+ Q++I + L
Sbjct: 47 TAHAQQQNI-AVVNDKPIRYQDFQRGLQRFQQQSQRPIGNSQVLALKNRVLQQMIDQELL 105
Query: 87 KQEIEKSGITF--DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
Q+ ++ IT V +NTG S ++ + L +G K+ L
Sbjct: 106 LQKAKEENITVNISDQEVETQLDNWIKNTGRSRKEIENLLSDRGSSIAQVKKQLKEGMHK 165
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
++ +E+ K + T +E
Sbjct: 166 QKLINRMVQQAQDGVEVTEKELKDAYEKSTEKE 198
>gi|145637308|ref|ZP_01792969.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae PittHH]
gi|145269560|gb|EDK09502.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae PittHH]
Length = 622
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/396 (10%), Positives = 118/396 (29%), Gaps = 95/396 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R + + + L + + +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIINLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLA 139
N + + + L+++ ++S L + G+ ++ F +
Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVP 178
Query: 140 IQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN------- 190
Q + + + A + + Y F P+
Sbjct: 179 AQVKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYID 238
Query: 191 ---------------------KLQNQGFVQKRIKDAEES----------RLRLPKDCNKL 219
+ F+ +R+ + + L+ + +
Sbjct: 239 LSADNISRNLQVTDVEIAQYYQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADV 298
Query: 220 EKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
K S KI + G ++ E++L F++ Q + P + + +++
Sbjct: 299 AKTKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK 358
Query: 277 DLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
++ K+ + ++ + + + +
Sbjct: 359 AQSLENVKAQIADLVRKSLMESRYFSLEKQASDKSF 394
>gi|186472670|ref|YP_001860012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
gi|184195002|gb|ACC72966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
Length = 250
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 81/251 (32%), Gaps = 24/251 (9%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K+ G+ E + +++++ + L +K G+T ++ + Q R GL A D
Sbjct: 17 FIRLLKLTGQFESL-IEQMVRDKLAVHAAKKHGVTVSADEIQERADQFRRVRGLHRAADM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ +LD I + F+ ++ + + E+E + K +
Sbjct: 76 NQYLDTLKISLDDFEAFITDGL----FQEKMLDQVGSDSEIEEYFSMNSPKFDA---LEV 128
Query: 181 RTVLF-SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+L K + AE +R D S G +L
Sbjct: 129 SHILLDDEGKAKEMISYLREDPDAFAEMAREHSIADTKD-----------SGGVIGKVLR 177
Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQ--KGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
L P + + P+ + E A+ K + + + +
Sbjct: 178 GSLKPDIEAKIFNAGVGDLLGPFASPDRSCFEIFAVTAKYPAQLDADVASEIKRLLREQW 237
Query: 297 IEKHEAEYVKK 307
+ E++ +
Sbjct: 238 LMARAQEHIIE 248
>gi|218233359|ref|YP_002367018.1| peptidylprolyl isomerase [Bacillus cereus B4264]
gi|296502878|ref|YP_003664578.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
gi|218161316|gb|ACK61308.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus B4264]
gi|296323930|gb|ADH06858.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
Length = 283
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ KN E + +L K IK+ ++ +
Sbjct: 121 --TVTDKDV-------KNNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 220 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 266
>gi|303327131|ref|ZP_07357573.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302863119|gb|EFL86051.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 373
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 81/287 (28%), Gaps = 33/287 (11%)
Query: 40 SRIRTTINGEVI----TDGDISKRIALLKLQKINGELEK-----IAVQELIVETLKKQEI 90
+ T+NGE + + R A L + + A+ LI+ L +QE+
Sbjct: 30 EGVVATVNGEPVHLRSVQSLLDSRSAALGTLQSSSLENMKLRYGEALGTLIIHALVRQEL 89
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
E I ++ Q D S FL + + + ++ + K
Sbjct: 90 EHRQIPVGDAALDLAVAQV--RGDYEPGDLSRFLADESLDEADWQALMRDHLAMLTFEKR 147
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ E+ A Y F +P+ ++R
Sbjct: 148 VLLSGIRVGLDEVRAY-----------YREHQADFQLPETLDLCLISGEERAA------- 189
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEY 269
L C + + + ++ P + ++ +
Sbjct: 190 -LDVFCAAFPAGRKTPRSDLLVQCLEVRGDEVPPPWNKDTSVLKPGACAPARRQNGSWQT 248
Query: 270 IAICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAII 314
+A+ +++ AY + K ++++ S A+I
Sbjct: 249 VALVERQKAHSLDMADAYPLIEHILLEQKKNAAFEQWLEGSLSRAVI 295
>gi|224476899|ref|YP_002634505.1| putative foldase protein prsA 1 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421506|emb|CAL28320.1| putative foldase protein prsA 1 [Precursor] [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 330
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 26/228 (11%)
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+K D+ ++ + G + F S L +QG+ N +K+ +Q K
Sbjct: 70 KKYSDKVDTKDIDQQIKDEQKQYGGK-DQFESALKQQGMSLNDYKEQKKLQ----AYQKQ 124
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK-RIKDAEESR 209
M K + E+ K K + +L + + +G K K AEE
Sbjct: 125 LLMDKVKVSDKEL---KDDTKKAS-------HILIKVKSDDKDKEGLSDKEAKKKAEEIH 174
Query: 210 LRLPKDCNKLEKFAS-----KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT 263
+ K+ +K + A K G Y+++ + F + L K + ++ T
Sbjct: 175 KEVEKNPDKFGEIAKKESMDKASAKKDGSLGYVIKGQMVKPFDKELFKLKDSQISDVVKT 234
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK----IEKHEAEYVKK 307
G I D E + QN K + + +K+
Sbjct: 235 DYGYHIIKADKPTDFSSERSKLKSQIIQNKVQKDPQILVDAYKDLLKE 282
>gi|171060801|ref|YP_001793150.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
gi|170778246|gb|ACB36385.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii
SP-6]
Length = 359
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 81/293 (27%), Gaps = 34/293 (11%)
Query: 44 TTINGEVITDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKKQEIEKS 93
T+ VI+ D +R + ++K + E++ L E +
Sbjct: 59 ATVGDTVISRADY-QRALAVAMRKKYYHAKPPEAEFARFRREVGDEVVNRVLLLAEARRR 117
Query: 94 GITFDSNTVNYFF----VQHARNTGLSA--EDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
GI D + Q+A + A + + + Q + + L +
Sbjct: 118 GIVPDREQIAATVAGYDAQYASSANWQANRDQMLAAVLPQ-LESESLLERL------GQL 170
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
VK L + + + +L + + Q + +
Sbjct: 171 VKRVPEPAEPVLRAYHAQHPALFTEPE--QVRLSVILLKVDPSSPQ--AMWDAAHAEGRQ 226
Query: 208 S--RLRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVT 263
RL D L + S + G+ Y L ++ + P
Sbjct: 227 LHRRLLAGADFGDLARLHSGDRSAAAGGQMDYAHRGMLPEAVHGVVDALPPGGLSAPVQL 286
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRSNAII 314
+GV + + D+R + A + + E + LR I
Sbjct: 287 LEGVAILRLDDRRPARLRAFEQVRARAAELWQREQAQARWTELIDTLRRGTAI 339
>gi|144900459|emb|CAM77323.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 273
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 84/278 (30%), Gaps = 48/278 (17%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ +NG I D++ L Q + ++ L ++ +K G+ D
Sbjct: 32 VVAEVNGTKILQSDLANYQRSLPPQLAAQAPFEALQDMVVNNMLVAEQAKKEGLDKDP-E 90
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V + Q ++ H K + P VK + + +
Sbjct: 91 VKQLYQQVLVKMWMN---------------KHLKAEIT-----PAAVKAAYDGYLASAKP 130
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
E E R +L D ++K E ++ + K
Sbjct: 131 EE-------------EVRARHILTETEDQAKAVIAELKKGADFTETAKAKSKDPSAKQ-- 175
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG 279
+ G Y + ++ PQF + + + P +Q G I + D+R
Sbjct: 176 --------NGGDLGYFAQGEMVPQFSSAAFAMKVGDLSEAPVQSQFGWHVIKVEDRRQAT 227
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+A + + EK + V +RS A + Y
Sbjct: 228 PPTLEQATPAIRE--ELAEKLAQKLVGDVRSKAKVTLY 263
>gi|306840866|ref|ZP_07473611.1| Chaperone surA precursor [Brucella sp. BO2]
gi|306289137|gb|EFM60393.1| Chaperone surA precursor [Brucella sp. BO2]
Length = 311
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 66/207 (31%), Gaps = 13/207 (6%)
Query: 120 FSSFLDKQGIGDNHFKQ-YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN-----I 173
+ GI H K ++ +V+ + ++ +N
Sbjct: 93 LLQRAREIGIEPEHEKDAEGRAETDEDALVRMVIEREVDVPSASRDEAQRYYENNRHRFT 152
Query: 174 TVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ +L + P ++ Q + A + +++S G
Sbjct: 153 SAPILEASHILIAADPADQEARDAARQTATRLAAAVIAEPATFASVALEYSSCPSGAQGG 212
Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALK---AY 287
L P+F+ L++ + TT P ++ G + + D+R G E+
Sbjct: 213 NLGQLTRGSTVPEFERALERMTPGETTANPIESRFGFHIVRL-DRRVEGEELPFDYVADK 271
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ + K ++Y+ L + A I
Sbjct: 272 IAGWLEASTWSKAVSQYIAILAAEAEI 298
>gi|238898000|ref|YP_002923680.1| PPIC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465758|gb|ACQ67532.1| PPIC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 624
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/398 (14%), Positives = 119/398 (29%), Gaps = 87/398 (21%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK------- 58
F + + + L F +++ I + ++ +NGE I+ + +
Sbjct: 5 FRTSTKNLTLKIILFFIVLSFIAGGLGSYFIGRATDYVAKVNGEKISRAQLEQALQNERH 64
Query: 59 RIA------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
R+ L L +L K + +LI + L Q G+ D V +
Sbjct: 65 RLKQQLGEHFLALADNKDYMQQLRKKVIDQLINQILIVQYTHHLGLKIDDEHVKDTIRKM 124
Query: 110 A-----------------RNTGLSAEDFSSFLDKQGIGDNHFK-------------QYLA 139
+ N G + ++F+ +Q I D + + ++
Sbjct: 125 SYFQTDNQFDNKKYLNLISNMGYTPDEFAELQRQQLINDQLLQIFGNSEFVLPNEIKRIS 184
Query: 140 IQSIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITV--REYLIRTVLF------ 185
+ V+ N F + + EI K KN + + ++
Sbjct: 185 ALLLQKRHVRLATLNLNTFQNRQKVTDEEIKDYYDKNKNTFTNPEQVKVSFIIMDAESME 244
Query: 186 -SIPDNKLQNQGFVQKRIKD----------AEESRLRLPKDC-----NKLEKFASKIHDV 229
I NK + + F ++ + + + + D K F+ +
Sbjct: 245 NKITVNKSEIKDFYEQHSAEFIQPELKNYSVIQLKTKKEADTTLDKLKKGALFSDLAKNK 304
Query: 230 SI--------GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
SI G+ +L + + + + + G + D +
Sbjct: 305 SIDSISRKKGGQLGWLEPDTTVDEIKQANLTEKGQLSGVIESSTGYFIFRLNDIKPSYV- 363
Query: 282 IALKAYLSAQNTPTKIEKHEAEY--VKKLRSNAIIHYY 317
L + K EK Y ++K S A+I+ +
Sbjct: 364 KPLSIVRNQLIEKIKQEKAIQAYYVLQKKVSEAMINNH 401
>gi|298384794|ref|ZP_06994353.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_14]
gi|298261938|gb|EFI04803.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 1_1_14]
Length = 514
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 94/294 (31%), Gaps = 49/294 (16%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
++ + + ++A + ING+ I + + + I+
Sbjct: 6 LLLGWISLFGVLAFAQEDPVVMRINGKEIPRSEFEYSYRRHTDGNGTKLSPREYAELFIL 65
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
LK + +G+ + F +Q N + YL
Sbjct: 66 SKLKVEAARAAGLD-------------------TTSAFRK--QQQAYRINLLRSYL---- 100
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANK--QKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ EM+ A QKMK N+ + IR + +P +
Sbjct: 101 -------------LDDQEMDGNARILYQKMKENVRGGQVQIRQIYKYLPQTITSRHLQEE 147
Query: 200 KRIKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256
+ D+ + + + D +L S + +++ +F+ ++
Sbjct: 148 QARMDSIYQVIQNQPSVDFARLVDRFSDDK-----RCRWIESLQTTSEFEEAAFSLAKGE 202
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P+ T +G+ + + D++++ + L + ++K V++L+
Sbjct: 203 ISKPFFTPEGIHILKVIDRKEVPAYEVVSDSLLNRLRRQPLDKGTEAIVEQLKK 256
>gi|222151803|ref|YP_002560961.1| peptidyl-prolyl cis/trans-isomerase PrsA homolog [Macrococcus
caseolyticus JCSC5402]
gi|222120930|dbj|BAH18265.1| peptidyl-prolyl cis/trans-isomerase PrsA homolog [Macrococcus
caseolyticus JCSC5402]
Length = 303
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 101/265 (38%), Gaps = 32/265 (12%)
Query: 54 GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
GD+ + + +L N ++ K + Q + + LK EK G D + +N + +
Sbjct: 37 GDVKQSDIMKEL--GNEQIAKTSFQLIFNDVLK----EKYGKKIDEDKINKETDKEIKKY 90
Query: 114 GLSAEDFSSFLDKQ--GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
G + F L +Q G+ +K+ + + K + +I K K
Sbjct: 91 G-DEKTFEQILQQQSSGMTVEQYKKK----RVTDEYQKQFLNDTIKISDKDI---KDNAK 142
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ +L ++ + ++ ++ AEE ++ + + +K A K D +
Sbjct: 143 KAS-------HILIAVKSDSNKDGLSDKEAKAKAEEILKQVKANKDDFKKIAKKESDDTQ 195
Query: 232 -----GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G+ Y+++ F+ L K +N T+ G I D +D+ E K
Sbjct: 196 SAKNNGELGYVVKGQTVEAFEKALFKLKPGEISNIVKTEFGYHIIMAEDDKDIAKE---K 252
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRS 310
L+ K++ + YV+ ++
Sbjct: 253 DKLAQTIRQNKLQDNPKLYVQAVQK 277
>gi|23009953|ref|ZP_00050812.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magnetotacticum MS-1]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263
+R++ +D K+ SK G + + + F + K + ++P T
Sbjct: 86 AARIKGGEDFAKVAAELSKDPGSKTEGGDLGWFTQERMVKPFADAAFKLAPGQVSDPVKT 145
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
Q G + + +KR + + Q K + + + KLR A +
Sbjct: 146 QFGWHVLRVEEKRTKP--VPTFDEMKEQIDQYLTRKAQQDTIVKLREAAKVE 195
>gi|121608769|ref|YP_996576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
gi|121553409|gb|ABM57558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
Length = 261
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 88/282 (31%), Gaps = 56/282 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQEIEKSGIT 96
+NG+ + +R +L+ Q E+EK E+I + Q + G+
Sbjct: 27 IAIVNGKPVP----KERADMLRQQLERSGRPVTPEIEKQINAEVIDREVLVQAALERGLE 82
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
++ N + AR L F DF
Sbjct: 83 GSADYKNQM--ELAREAILINALF-----------------------------ADFRKAN 111
Query: 157 GNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E A K + +EY + + + K+ E+ + KD
Sbjct: 112 PVTDAETQAEYDKFVAANNGKEYKASHI-LVDKEADAKAIIAAIKKGAKFEDIAKKQSKD 170
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAIC 273
G + + +F + L+K Q T P +Q G I +
Sbjct: 171 PG---------SGAKGGDLGWASPASYVSEFTEALIKLDQGKMTDAPVKSQFGWHVIRLD 221
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
D R + + + Q +++ +A+Y ++LR+ A I
Sbjct: 222 DMRPIQ--LPKLEDVKPQVAQQLLQQKQAKYQEELRAKAKIE 261
>gi|18309250|ref|NP_561184.1| hypothetical protein CPE0268 [Clostridium perfringens str. 13]
gi|110800910|ref|YP_694723.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens ATCC 13124]
gi|168207845|ref|ZP_02633850.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens E str. JGS1987]
gi|168211827|ref|ZP_02637452.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens B str. ATCC 3626]
gi|168215167|ref|ZP_02640792.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens CPE str. F4969]
gi|168218257|ref|ZP_02643882.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens NCTC 8239]
gi|169344703|ref|ZP_02865666.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens C str. JGS1495]
gi|18143926|dbj|BAB79974.1| hypothetical protein [Clostridium perfringens str. 13]
gi|110675557|gb|ABG84544.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens ATCC 13124]
gi|169297170|gb|EDS79284.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens C str. JGS1495]
gi|170660843|gb|EDT13526.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens E str. JGS1987]
gi|170710226|gb|EDT22408.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens B str. ATCC 3626]
gi|170713436|gb|EDT25618.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens CPE str. F4969]
gi|182379724|gb|EDT77203.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens NCTC 8239]
Length = 248
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 44/280 (15%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M ++ T+ IT I + IA Q+ ++++ + +
Sbjct: 1 MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIAF---------- 50
Query: 98 DSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ A+ TGL E+F L+K F + L Q + + + +
Sbjct: 51 ------ELMSEFAKETGLDKTEEFKDQLNK-------FAKELLAQMVMKKTLSS---VTV 94
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E + + K + + + +L ++ K EE
Sbjct: 95 TDDEAKAFYEEHKENFVELETVTAKHILV----------ASEEEAKKVEEEIASGSITFE 144
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ K++S G + + P+F+ + P TQ G I + DK
Sbjct: 145 DAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKVEDK 204
Query: 276 RDLGGEIALKAYLSAQNTPTKIEK-HEAEYV---KKLRSN 311
+ + + Q I++ + +Y+ K+LR
Sbjct: 205 TE--AKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREK 242
>gi|330975097|gb|EGH75163.1| periplasmic folding chaperone [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 393
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 12/166 (7%)
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ K+ F K + ++ A QK + +L + N N + +I++
Sbjct: 3 ELKKSSFFDKVQVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKLNDEQAKAKIEEI 60
Query: 206 EESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYV 262
++ RL +D L K S+ S G Y + P F+ L +++ + P
Sbjct: 61 QQ-RLAKGEDFAALAKEYSQDPGSSNKGGDLGYAGKGVYDPAFEEALYALNKDQVSQPVR 119
Query: 263 TQKGVEYIAICDKRDLGGEIALKAY------LSAQNTPTKIEKHEA 302
T G I + L +Q K +
Sbjct: 120 TDFGWHLIKLLGVEAPSVPTFASLKGKLTNDLKSQLVEQKFVEVTK 165
>gi|294788198|ref|ZP_06753441.1| putative signal peptide protein [Simonsiella muelleri ATCC 29453]
gi|294483629|gb|EFG31313.1| putative signal peptide protein [Simonsiella muelleri ATCC 29453]
Length = 292
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/316 (17%), Positives = 105/316 (33%), Gaps = 45/316 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----- 70
+ F L ++ +S +A + T+NG I D+ +R ++
Sbjct: 1 MKKTFKLTTVAVLFALSGSLFAAT---VVTVNGVKIDSSDVERRAENVQKNTQGQISDGP 57
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+L + ELI E L QE ++ + + + + + LDKQ
Sbjct: 58 QLRQFITNELITEQLVVQEAKRLKLDKS-SDYQAAEAEALKQAK------AQGLDKQ--- 107
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
FKQ W D ML Y + + + ++Y + +
Sbjct: 108 -ADFKQ------NWADYQNRLLMLAYA---ANLAKQQPISEAAAQQQYN-QIKSRYAGSS 156
Query: 191 KLQNQGFVQKRIKDAEESR---LRLPKDCNKLEKFASKIHDVSIGKAQ--YLLESDLHPQ 245
++Q V + DAE + + K + +K++ + G Y+ DL
Sbjct: 157 EIQLGEIVTNKPADAEAAINDLTKKKKFSDVAKKYSMSKSSQTSGGIVPEYVALPDLKDG 216
Query: 246 ----FQNLLKKSQNNTTNPYVTQKGVEY-IAICDKRDLGGEI--ALKAYLSAQNTPTKIE 298
+Q + S+ T V V + + DKR + +KA + Q ++
Sbjct: 217 NNLVYQAVNGLSKGQFTKTPVKDGNVSLVLYVNDKRAINVPTFNEMKASIVQQMEDEQLS 276
Query: 299 KHEAEYVKKLRSNAII 314
+ L A I
Sbjct: 277 LA----IDNLGKKAKI 288
>gi|182626803|ref|ZP_02954541.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens D str. JGS1721]
gi|177907849|gb|EDT70447.1| peptidyl-prolyl cis-trans isomerase family protein [Clostridium
perfringens D str. JGS1721]
Length = 248
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 86/280 (30%), Gaps = 44/280 (15%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M ++ T+ IT I + IA Q+ ++++ + +
Sbjct: 1 MEKKVLATVGNTEITSDYIDEIIARYPAQQQAMLASDEGKRQVLEQAIAF---------- 50
Query: 98 DSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ A+ TGL E+F L+K F + L Q + +
Sbjct: 51 ------ELMSEFAKETGLDKTEEFKDQLNK-------FAKELLAQMVMK-----KTLSSV 92
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E A Q+ K V K ++ K EE
Sbjct: 93 TVTDDEAKAFYQEHKE--------NFVELETVTAKHILVASEEEAKKVEEEIASGSITFE 144
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ K++S G + + P+F+ + P TQ G I + DK
Sbjct: 145 DAANKYSSCPSKEQGGNLGSFSKGMMVPEFEEAAFNLELGVVSAPVKTQFGYHLIKVEDK 204
Query: 276 RDLGGEIALKAYLSAQNTPTKIEK-HEAEYV---KKLRSN 311
+ + + Q I++ + +Y+ K+LR
Sbjct: 205 TE--AKTKAFEDVKEQVVNMLIQERQQKKYLELIKELREK 242
>gi|321314718|ref|YP_004207005.1| molecular chaperone lipoprotein [Bacillus subtilis BSn5]
gi|320020992|gb|ADV95978.1| molecular chaperone lipoprotein [Bacillus subtilis BSn5]
Length = 294
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 96/306 (31%), Gaps = 45/306 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I + + + + +T G++ + K L ++
Sbjct: 1 MKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNM---KKTAGASVLTQL 57
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K ++ ++ G + +++ + G K
Sbjct: 58 VQEKVLDKKYK----------VSDKEIDNKLKEYKTQLG---DQYTALEKQYG------K 98
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
YL Q + + + + EI + +K + +L + D K +
Sbjct: 99 DYLKEQVKYELLTQKAAKDNIKVTDDEIKEYWEGLKG----QIRASHIL--VADKKTAEE 152
Query: 196 GFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE--SDLHPQFQNL-LK 251
+ + + + D + G+ ++ + L F+ K
Sbjct: 153 IEKKLKKGEKFDALAKEYSTDTGSA---------TNGGELGWISKDNEQLDATFRKAAFK 203
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLR 309
N ++P TQ G I ++R + +K L ++ K+ A E V+K+
Sbjct: 204 LKTNEVSDPVKTQFGYHIIKKTEERGKYED--MKKELKSEVLEQKLNDSNAVQEAVQKVM 261
Query: 310 SNAIIH 315
A I
Sbjct: 262 KKADIE 267
>gi|292487473|ref|YP_003530345.1| putative protease maturation protein [Erwinia amylovora CFBP1430]
gi|292898715|ref|YP_003538084.1| peptidyl-prolyl cis-trans isomerase D [Erwinia amylovora ATCC
49946]
gi|291198563|emb|CBJ45671.1| peptidyl-prolyl cis-trans isomerase D [Erwinia amylovora ATCC
49946]
gi|291552892|emb|CBA19937.1| putative protease maturation protein [Erwinia amylovora CFBP1430]
Length = 623
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 82/280 (29%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+ I+ + R ++ ++ + A+ +LI E L
Sbjct: 42 AAKVNGQEISRAQFERAFSSERARQQQMLGEQFSVLAGNDGYMQQMRQQALSQLIDEMLL 101
Query: 87 KQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + G+T + + + S ++ G + + + L Q
Sbjct: 102 TQYAKDIGLTISDDQIKQAIFTQPAFQTAGKFDNAKYISIINNMGFTADQYAEALRKQLT 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+++ + + + + ++ L+R V ++ + ++
Sbjct: 162 TQQLIE-----SVTGTDFVLGNEADSLAALVAQQRLVREVTINVNALAAKQNVTQEEIAN 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++ + L + A + + Q+ +K Q + T P
Sbjct: 217 YYQQHQSSLMSSEQFRVSYIKM-------DAATMQQPVSESDIQSWYEKHQGDYTQPQRN 269
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + I K + L + ++ A+
Sbjct: 270 RYSI----IQTKTEAEARSVLDVLKKGGDFARLAKEKSAD 305
>gi|120436843|ref|YP_862529.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gramella forsetii
KT0803]
gi|117578993|emb|CAL67462.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gramella forsetii
KT0803]
Length = 482
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 30/291 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ-----ELIVETLKKQEIEKSG 94
I I +I D D+ + K + G L+ L +
Sbjct: 62 DGIAAVIGEYIILDSDVD---LMYKDMQSQGMSTADVTDCNLAGSLMENKLYAHHAIQDS 118
Query: 95 ITFDSNT----VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ---YLAIQSIWPDV 147
I + V+ A+ G S E F K+ + + L Q
Sbjct: 119 IIIPDSQISATVDQQIQGLAQQAG-SMEKVLEFYKKE--SEAELRDEIFQLTKQRQLAQR 175
Query: 148 VKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR---- 201
++ + + E+ K + E + ++ P+ + V R
Sbjct: 176 MQQKIIEEIEVTPEEVRQYYVGMDEKPMFGTEVELSQIVIE-PEIPESEKQKVIDRLNGF 234
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260
D EE+ + D G+ + +F+++ + + P
Sbjct: 235 KADIEENGASFSTKAVLYSQDPGNASD--GGRITLTRKDAFVKEFKDVAFSLQEGEISEP 292
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ T+ G I + R E L+ + + + + LRS
Sbjct: 293 FETEFGYHIIQVDKIRGQTVE--LRHIILIPDVTNASVEAARTEIDTLRSK 341
>gi|315180639|gb|ADT87553.1| peptidyl-prolyl cis-trans isomerase D [Vibrio furnissii NCTC 11218]
Length = 619
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 8/145 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q + G+ + Q + E + S L + G
Sbjct: 88 RKSVLDRMINDLLLDQHAQALGLRVSDTQIRQMILDMPQFQTDGKFDQEIYQSALRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ D+V+N + E + + + + IRT+ S +
Sbjct: 148 SPDSFAEYMR-----RDLVRNQLLSALQGSEFTLKGEVEAQGELITQTRDIRTITLSPAE 202
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK 214
+ + + +++ R +
Sbjct: 203 FAKSIELSDDEIEQYYKQNSERYTR 227
>gi|260768943|ref|ZP_05877877.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio furnissii CIP
102972]
gi|260616973|gb|EEX42158.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio furnissii CIP
102972]
Length = 619
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 8/145 (5%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + +I + L Q + G+ + Q + E + S L + G
Sbjct: 88 RKSVLDRMINDLLLDQHAQALGLRVSDTQIRQMILDMPQFQTDGKFDQEIYQSALRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +Y+ D+V+N + E + + + + IRT+ S +
Sbjct: 148 SPDSFAEYMR-----RDLVRNQLLSALQGSEFTLKGEVEAQGELITQTRDIRTITLSPAE 202
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPK 214
+ + + +++ R +
Sbjct: 203 FAKSIELSDDEIEQYYKQNSERYTR 227
>gi|227543912|ref|ZP_03973961.1| peptidylprolyl isomerase [Lactobacillus reuteri CF48-3A]
gi|300909659|ref|ZP_07127120.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri SD2112]
gi|227186113|gb|EEI66184.1| peptidylprolyl isomerase [Lactobacillus reuteri CF48-3A]
gi|300893524|gb|EFK86883.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri SD2112]
Length = 312
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 81/263 (30%), Gaps = 47/263 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T +G IT+ + + K +Q++I
Sbjct: 6 LIAIIAGAALMMPLAACGNKAVATTSGGKITESEYYSSMK-------QTSAGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + + ++ G VN + + G DF+++L Q + + KQ +
Sbjct: 59 LDKVLE---KQYGKEVSDKQVNAQYNTYKNEYG---SDFNAYLQSQNLTEKSLKQQIRSN 112
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + NKQ K T + ++T +
Sbjct: 113 LLLTAAAR----------HYSHITNKQINKQWTKYQPKVQTATILVGS------------ 150
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLES------DLHPQFQN-LL 250
DAE+ +L NK + F D L + L ++
Sbjct: 151 KSDAEDIINQLNDSSNKYKTFKKLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAF 210
Query: 251 KKSQNN-TTNPYVTQKGVEYIAI 272
K TT P T G + I +
Sbjct: 211 KLKTGEYTTTPVKTDDGYQVIYM 233
>gi|294669107|ref|ZP_06734191.1| peptidyl-prolyl cis-trans isomerase D [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308921|gb|EFE50164.1| peptidyl-prolyl cis-trans isomerase D [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 566
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/384 (12%), Positives = 106/384 (27%), Gaps = 87/384 (22%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F+++ + LI + + A S + E I+ ++ +
Sbjct: 1 MFSAVEKYNGPAKIMLGLIALTFIGFGASTVAAPGSDYIVKVGDEKISTQNVQAAVREEG 60
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV------------------NYFF 106
L E + A+ L + GI + F
Sbjct: 61 L-----ESNQDALTVLTDRAYLYEGARAMGINVSLEQLKQVIMDDKGFQDENGRFNEQKF 115
Query: 107 VQHARNTGLSAEDFSSFLDK---------------------------------------- 126
+G++ + L
Sbjct: 116 RNFLAQSGMTEDQLIEKLRHQFELQNVANLAANGNIVSSQQLERIARLMQAEREIRTAVV 175
Query: 127 ------QGIGDN--HFKQYL---AIQSIWPDVVKNDFML--------KYGNLEMEIPANK 167
G+ + K Y + + P VK +++ + E E+
Sbjct: 176 DPRNFAAGVKVDDAALKAYYDKDKSKYLIPKAVKFEYIELSAKTLADRQTVSEEEVKKAF 235
Query: 168 QKMKNITVREYLIRTVLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ ++ + + ++F++P K + + +K + +A+ S K + A+
Sbjct: 236 AEQQSSAQPKQEVSHIMFALPQGGDKAKIKAEAEKVLAEAKASPDNFAALAQKYSQDAAT 295
Query: 226 IHDVSIGKAQYL-LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
S G + S L +F+ + K + G + I + +
Sbjct: 296 AQ--SGGALGVVDKSSALPEEFKAAIAKLNKGDIALVESTAGFHIVRITNTQGQQSFDEA 353
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKL 308
KA L A+ K ++ A+ + L
Sbjct: 354 KASLEAELKQKKAQQALAQMRQTL 377
>gi|289549224|ref|YP_003474212.1| hypothetical protein Thal_1456 [Thermocrinis albus DSM 14484]
gi|289182841|gb|ADC90085.1| hypothetical protein Thal_1456 [Thermocrinis albus DSM 14484]
Length = 444
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/345 (12%), Positives = 100/345 (28%), Gaps = 35/345 (10%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKR 59
+F+ + K L ++ F + +NG I+ D
Sbjct: 1 MFSFIQRHRKFLVVTVSVVSFAFFLWLFLAGSVQDILRGKRACVAVVNGTCISLRDYRME 60
Query: 60 ----IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARN 112
LK +++ G +++ + LIV L Q+ + G V
Sbjct: 61 LLPYSQFLKNEEMEGMIKEQVLDSLIVRELLYQKALEMGFVASDEEVIDTIKSDPTFQEG 120
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
SA + L++ + +++YL +V Y + +
Sbjct: 121 GVFSASKYREVLERNNLEPAQYEEYLKKMLSIQKLVSFISNSVYITEKEKQANLLPYTTL 180
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGF-------VQKRIKDAEESRLRLPKDCNKLEKFASK 225
+T + YLI I + + + + RL ++ ++
Sbjct: 181 LTGKLYLITPDSVKISYEPTDAELLNYYHQHREEFKRPEKRVVRLWETPQRDEALNIYNQ 240
Query: 226 IHDVSIGKAQYL--LESDLHPQFQNLLKKSQNNTTNPYV---TQKGVEYIAI-------C 273
+ + Y + + +L+ ++ T+ G +++ +
Sbjct: 241 LKSSKV-PTGYREVILPQQEAELSPVLRAEITRLSSKEPYTVTKDGDKFVVLWLYSWEPS 299
Query: 274 DKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
D + + + + + ++ Y K L+ I Y
Sbjct: 300 GYEDFNNVKDKIKQLLVQQKRLEKLQDVAQSAY-KDLKEGKQIDY 343
>gi|46198541|ref|YP_004208.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB27]
gi|46196163|gb|AAS80581.1| probable peptidyl-prolyl cis-trans isomerase [Thermus thermophilus
HB27]
Length = 337
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 85/283 (30%), Gaps = 37/283 (13%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------GDISKRIAL 62
+ F + + + + + ++ + + E IT + R AL
Sbjct: 18 MRSFTRSMLAWGMRAFLLALTLLLVPMALAQGEVVAQVGPEAITREAFELRYGLFVRSAL 77
Query: 63 LKL--------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+L + + ++ L E Q K G+ D V +
Sbjct: 78 AQLGLPDTEEARALLAAYRPAFLEALAREKALLQRARKEGLYPDPAAVEARVHAL-KEAF 136
Query: 115 LSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKN 172
E L + G+ G +++ +A + + + + + A +
Sbjct: 137 PEEEALEEALRQAGVPGLEAYRRLVAEAMALEAL-EARYRSRLAVSRAALKALWLLSPEY 195
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFASKIHDVS 230
Y R +L ++AEE+RLRL + ++ + S+
Sbjct: 196 RHPTLYCARHLLVPT--------------REEAEEARLRLARGEAFAEVARAVSQDPGSK 241
Query: 231 --IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
G E P F+ L++ + P T+ G I
Sbjct: 242 EEGGDLGCAPEGTYVPAFEEALVRLRPGEVSGPVRTEFGYHLI 284
>gi|160882392|ref|ZP_02063395.1| hypothetical protein BACOVA_00341 [Bacteroides ovatus ATCC 8483]
gi|237719065|ref|ZP_04549546.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4]
gi|260172001|ref|ZP_05758413.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2]
gi|293369504|ref|ZP_06616083.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CMC 3f]
gi|299148148|ref|ZP_07041210.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
3_1_23]
gi|315920314|ref|ZP_07916554.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156112205|gb|EDO13950.1| hypothetical protein BACOVA_00341 [Bacteroides ovatus ATCC 8483]
gi|229451444|gb|EEO57235.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4]
gi|292635389|gb|EFF53902.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CMC 3f]
gi|298512909|gb|EFI36796.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
3_1_23]
gi|313694189|gb|EFS31024.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 460
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 103/315 (32%), Gaps = 43/315 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGEL 72
VL IF V + + E I D+ + R+ AL ++ G+
Sbjct: 8 RFVVTLVLAIFANVATYAQDNVVDEVVWVV--GDEAILKSDVEEARMDALYNGRRFEGDP 65
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAE 118
+ +E+ V+ L + + I + N + Q + ++
Sbjct: 66 YCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSREKMEEYFNKTST 125
Query: 119 DFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
L + G+ +Q LA + P V+ F + IP
Sbjct: 126 QIRETLRDNARDGLTVQKMQQKLAGDIKVTPAEVRRYFKDLPQDSIPYIP---------- 175
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIG 232
+ ++ + P + V++ ++D + + D + L + S K + G
Sbjct: 176 -TQVEVQIITLQ-PKIPVSEIEDVKRTLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGG 233
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-- 288
+ ++ + P + N+ + + ++ G I + +KR G+ ++
Sbjct: 234 ECGFMGRGMMDPAYANVAFSLQDPKKVSKIVESEFGFHIIQLIEKR---GDRVNTRHILL 290
Query: 289 SAQNTPTKIEKHEAE 303
+ + ++ + A
Sbjct: 291 RPKVSEKELTEACAR 305
>gi|294635328|ref|ZP_06713825.1| peptidylprolyl cis-trans isomerase D [Edwardsiella tarda ATCC
23685]
gi|291091304|gb|EFE23865.1| peptidylprolyl cis-trans isomerase D [Edwardsiella tarda ATCC
23685]
Length = 626
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/354 (10%), Positives = 96/354 (27%), Gaps = 90/354 (25%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQ 66
L + L+ FVL I +A ++G+ I+ + + + +LQ
Sbjct: 14 LKVILALIIISFVLTGVGNYLIGGSGDYA------AKVDGQEISRAQLEQAVQNERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF------- 105
+ G+ L + + +I + L Q +K + V
Sbjct: 68 QQLGDQFSVLAGNEGYMKELRQQVLSRMIDDVLLDQYAKKLNLAISDAQVKEAIRTLPYF 127
Query: 106 ----------FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----- 150
+++ GL+ + ++ + +Q + + + A P V +
Sbjct: 128 QTDNHFDNAKYLEMVARLGLTPDSYAQLMRQQLVTQQLIQGFTATGFTLPSEVSSLAALT 187
Query: 151 ------------------------------------------DFMLKYGNLEMEIPANKQ 168
+ Y ++ +K
Sbjct: 188 MQQRLINLATIDIKQLMPQQKVSDAELQGYYQQHQNSFIAPEAVRVSYIEMDAAAINDKM 247
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+ + + Y + + + K +A+ +L K + D
Sbjct: 248 TVSDAEISAYYDQHKRSFTQPERNKYSVIQVKSEAEAKAIAEQLAKGADFATLAKEHSSD 307
Query: 229 V----SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
+ + G+ ++ + N ++ + P + G + + D +
Sbjct: 308 IISRKNGGELGWMEPESTPQEILNAKLTTKGQVSAPIASSVGYLIVRLDDMQPA 361
>gi|213521163|gb|ACJ50520.1| peptidyl-prolyl cis-trans isomerase D [Pseudomonas fluorescens]
Length = 279
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 21/178 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS----RIRTTINGEVITDGDISKRIALLKLQKING- 70
+ + II ++ ++ +S + +NGE IT ++S+ + + + Q +
Sbjct: 13 IAKTIIGIIVALMAFTGIEAIFQASGNNKQDVAKVNGEEITQTELSQAVDMQRRQLMQQL 72
Query: 71 ------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
L A++ LI L Q S F ++ +Q +
Sbjct: 73 GKDFDASLLDEKLLRDAALKGLIDRKLLLQGAADSKFGFSEAALDQVILQTPEFQVDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+AE F + + G F+Q L + + V+ + E+ A + K
Sbjct: 133 NAERFDQVVRQLGYSRLQFRQMLTQEMLIGQ-VRAGIAGSGFVTDAEVLAFARLEKQT 189
>gi|77459915|ref|YP_349422.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens Pf0-1]
gi|77383918|gb|ABA75431.1| peptidyl-prolyl cis-trans isomerase [Pseudomonas fluorescens Pf0-1]
Length = 623
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/390 (13%), Positives = 116/390 (29%), Gaps = 93/390 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + +I ++ + + + +NGE I+ ++S+ +
Sbjct: 1 MLQNIRDNSQGWIAKTIIGVIVALMALTGFDAIFQATTHKNEAAKVNGEEISQNELSQAV 60
Query: 61 ALLKLQKING-------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-- 105
+ + Q + L + A++ LI L Q E+S F ++
Sbjct: 61 DMQRRQLMQQLGKDFDASLLDEKMLRESALKGLIDRKLLLQGAEQSKFAFSEAALDQVIL 120
Query: 106 ---------------FVQHARNTGLSAEDFSSFLDK--------QGIG------------ 130
F Q R G S F L + G+
Sbjct: 121 QTPEFQVDGKFSSDRFDQVIRQLGYSRMQFRQMLAQEMLIGQLRAGVAGSGFVTDAQVLA 180
Query: 131 ----------------------------------DNHFKQYLAIQSI---WPDVVKNDFM 153
D H K+++ + + ++ K+ F
Sbjct: 181 FARLEKQTRDFATLNIKADPSAVKLTDDEVKAYYDEHAKEFMTPDQVVIDYLELKKSSFF 240
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + ++ A QK + +L + N + + +I++ + +
Sbjct: 241 DQVAVKDEDLQAAYQKEIANLSEQRRAAHILIEV--NDKTTEAQAKAKIEEVQARLAKGE 298
Query: 214 KDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
K ++F+ + G Y P F+ L +++ + P T G I
Sbjct: 299 KFEALAKEFSQDPGSANNGGDLGYAGPGVYDPAFEKALYSLNKDQVSEPVRTDFGFHLIK 358
Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEK 299
+ ++ +LK L+ + ++E+
Sbjct: 359 LLGVEAPEVPTLASLKDKLTRELKTQQVEQ 388
>gi|332293063|ref|YP_004431672.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter
diaphorus 4H-3-7-5]
gi|332171149|gb|AEE20404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter
diaphorus 4H-3-7-5]
Length = 647
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 87/269 (32%), Gaps = 58/269 (21%)
Query: 24 IFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQ 78
+F ++ + S+A + + I TIN EVI + K L+K + + ++
Sbjct: 4 LFLLLIFLCGFSFAHAQKDILLTINNEVIDSEEFTRVYEKNSELIK--EDESNAPEDYLK 61
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA-EDFSSFLDKQGIGDNHFKQY 137
I LK QE + G+ N S ++ S++
Sbjct: 62 LFIDYKLKVQEAYRLGL----------------NNKKSYQDELSAY-------------- 91
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
Q +++ E + + TV E R +L + + +
Sbjct: 92 -RAQLA------KNYLNDVKVTEELVKEAYDR----TVNELNARHILVRVSPDASPSDTL 140
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKK 252
V R + ++R R+ EK A I + + G + + F+N
Sbjct: 141 VAYR--NITQARERIING-ENFEKVARAISEDPSAKKNGGNLGWFKAFKMVYPFENAAYN 197
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
+ N + P+ T G + R G
Sbjct: 198 TAINEVSKPFRTSFGYHIVQPIAARKSKG 226
>gi|298372477|ref|ZP_06982467.1| ppic-type ppiase domain-containing protein [Bacteroidetes oral
taxon 274 str. F0058]
gi|298275381|gb|EFI16932.1| ppic-type ppiase domain-containing protein [Bacteroidetes oral
taxon 274 str. F0058]
Length = 650
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 69/221 (31%), Gaps = 29/221 (13%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDF-SSFLDKQGIGDNH---FKQYL---AIQSIW 144
++ + T++ + + + F +D + +G + F++ L Q
Sbjct: 46 RTNVKTKPQTIDEYLQ--------TYKKFRLKVIDAEALGYDTLGSFRKELDSYRNQMAI 97
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRI 202
+ + + E ++ +N ++ +L +P N QK +
Sbjct: 98 GYL---------TDKDKEKALIEEAYRN-MQQDVEASHILLLLPQNATPEDTAKVYQKAL 147
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQFQNLLKKSQNNTTNPY 261
+ + + E D + G ++ + P + L ++P
Sbjct: 148 NIIKRLKKENFRTVATAESDDVGTKD-NGGYLGWITGQMMVYPVEKELYSLPIGKISSPI 206
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
T G I + ++R G++ + L E+
Sbjct: 207 RTGYGYHIIKVTNRRQAVGKVKVAHILKQFPENATKEQRAK 247
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ +L P+N + Q K A +L+ D + K S ++ S G
Sbjct: 229 VAHILKQFPENATKEQRAKLKSEIYAIYDKLKNGADFASMAKENSDDEMSANSGGVLNEF 288
Query: 238 LESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTP 294
+ F+N K++ + ++P T G I + D++ + E ++
Sbjct: 289 GVGRMVEVFENTAFGLKNKGDISSPIETPYGWHIIQLIDRKPVDSFEKMKSDIITHFGFD 348
Query: 295 TKIEKHEAEYVKKLR 309
+ + + +V KL+
Sbjct: 349 GRYDACKKSFVDKLK 363
>gi|189426095|ref|YP_001953272.1| hypothetical protein Glov_3046 [Geobacter lovleyi SZ]
gi|189422354|gb|ACD96752.1| conserved hypothetical protein [Geobacter lovleyi SZ]
Length = 531
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 47/154 (30%), Gaps = 4/154 (2%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLS 116
+ L + A+ LI TL + + G++ ++ + N
Sbjct: 77 ANFTPELEKQLNLRQQAIDRLIDSTLIIKAAKSQGVSVSKEEISAAIAGMSAFQQNGSFD 136
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ L I + F++ + + + M K + E K ++
Sbjct: 137 FGLYQQMLKANRITPDAFEESKKRELLIEK-TRKAVMDKVVISDDEALKQFHKEQDKLEL 195
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
Y + + KL + K+AE+ +
Sbjct: 196 SYASFSAADVSAEVKLGDADLQDYLTKNAEKFKS 229
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
L + + + ++ +K AE ++ + + +L + + + Y + DL
Sbjct: 381 LPPLAQVRTTVEQQLRA-LKAAELAKQKAVEAQKQLAGNGAGLKLQATPAFGYNSKGDLP 439
Query: 244 ------PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNT 293
P + + + + T G + A+ K+ K + Q
Sbjct: 440 GIGNSKPLMEKVFELTTAGATPSEPMLVGNRWYAVRLKQRNAAPQADFAPRKDEVKRQLL 499
Query: 294 PTKIEKHEAEYVKKLRSNAIIHY 316
P K E+ ++K+LRS A I Y
Sbjct: 500 PAKQEEALRAWLKELRSKAKIVY 522
>gi|116329122|ref|YP_798842.1| hypothetical protein LBL_2545 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330269|ref|YP_799987.1| hypothetical protein LBJ_0534 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121866|gb|ABJ79909.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123958|gb|ABJ75229.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 359
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 103/315 (32%), Gaps = 18/315 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIALLKLQKI------NGE 71
+F + ++ +R+ T+ I++ D+ KLQK
Sbjct: 27 FFTGTFVFLFLQNPIQTAESLNRVIATVGTISISELDLDDASEKYTKLQKHLKHEDFRKS 86
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLD-KQGI 129
L + LI + E+ I + V+ + G++ + F ++ G+
Sbjct: 87 LRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDAEIEKRMEVMGITNRKQFEKAMETSSGM 146
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ L Q +++ + E EI + + ++ E R + + +
Sbjct: 147 PFELWVTELPYQIKKGQLLQLKIAVP-PPSEQEIKSWYNQNRDKVGFEIRYRIISIAPEN 205
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQ 247
+ +Q + + K + D +S L P + + + +++ DL+ +
Sbjct: 206 DSIQEENRLYKELSDIRKSVLADPSSFALIAGSPRNDPTLRSRRGMVEWISSFDLYKYSK 265
Query: 248 NLLK----KSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ + ++ + I KR E L+ + K E
Sbjct: 266 ITATIAAPLPNGGVSEVFRDERKRYSILKIEGKRPTPMEN-LRGGIQNILYRDKEEDTFY 324
Query: 303 EYVKKLRSNAIIHYY 317
++K+ R+ I +
Sbjct: 325 RWLKESRAEIPIQIF 339
>gi|294508706|ref|YP_003572765.1| Foldase protein prsA [Precursor] [Salinibacter ruber M8]
gi|294345035|emb|CBH25813.1| Foldase protein prsA [Precursor] [Salinibacter ruber M8]
Length = 342
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/274 (11%), Positives = 86/274 (31%), Gaps = 19/274 (6%)
Query: 54 GDISKRIALLKL--QKINGELEKIAVQELIVETLKKQ----EIEKSGITFDSNTVNYFFV 107
R+++ + + + + + ++LI ++ E + + D VN
Sbjct: 68 YQQQVRMSMKRQAPSQQSEDQMQETHRQLIRGFARQHALRGEAKAQNLDVDPTQVNARLE 127
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ + S E F L + + + + LA Q + + ++ A
Sbjct: 128 KLKQRYE-SEEQFQKQLARNNMTVDSVRSLLADQFRQQQLQRQMAENYEEPSSDDVTAYS 186
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQN--QGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K + I + +L +N ++ + + +++ + +
Sbjct: 187 EKNRRIRA-----QHILIKAGENAPESEVDSARKAAAALVDSAKMEDVDFAELARRHSQG 241
Query: 226 IHDVSIGKAQYLLESDLHPQFQN---LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G + + +F L S + P T+ G I + + +
Sbjct: 242 PSAQKGGDLGFFTRDRMVDKFAEAAYALSDSGDVAPEPVHTRFGFHVIRLTNAGEPMDTT 301
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKK--LRSNAII 314
+ ++ + +E ++ +R+N I
Sbjct: 302 KARKQMTKERRQQAVEDQINALLEDATVRTNPDI 335
>gi|163940109|ref|YP_001644993.1| peptidylprolyl isomerase [Bacillus weihenstephanensis KBAB4]
gi|229011588|ref|ZP_04168774.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048]
gi|229059985|ref|ZP_04197359.1| Foldase protein prsA 1 [Bacillus cereus AH603]
gi|229133173|ref|ZP_04262008.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196]
gi|163862306|gb|ABY43365.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
weihenstephanensis KBAB4]
gi|228650299|gb|EEL06299.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST196]
gi|228719398|gb|EEL71002.1| Foldase protein prsA 1 [Bacillus cereus AH603]
gi|228749743|gb|EEL99582.1| Foldase protein prsA 1 [Bacillus mycoides DSM 2048]
Length = 283
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 95/302 (31%), Gaps = 50/302 (16%)
Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
L + I+ V+ A SS T +T+ ++ L+ L ++ + +
Sbjct: 6 LFMGTIIACVALTLSACGSSENVATSKVGNVTEKEL---SKELRQTYGKSTLSQMMLNKA 62
Query: 81 IVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQY 137
+++ K +E +K V Q + F L++ G+ ++ K+
Sbjct: 63 LLDKYKVSDEEAKK--------QVEAAKEQMG-------DKFKVALEQVGLKNEDELKER 107
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + ++ + ++ K+ E + +L + +
Sbjct: 108 MKPEIALEKAIRA------TVTDKDV-------KDNHKPEMKVSHILVKDEKTAKEVKEK 154
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256
+ +D + +D E+ G+ +F+ K
Sbjct: 155 INN-GEDFTALAKQYSEDTGSKEQ---------GGEIAGFAPGQTVKEFEEAAYKLDAGQ 204
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNA 312
+ P T G I + DK++L +K + +++ ++ + L A
Sbjct: 205 VSEPIKTSYGYHIIKVTDKKELKPFDEVKDTIRKDLEQQRLQDATGKWKQQVINDLLKEA 264
Query: 313 II 314
I
Sbjct: 265 DI 266
>gi|301299775|ref|ZP_07206018.1| PPIC-type PPIASE domain protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852630|gb|EFK80271.1| PPIC-type PPIASE domain protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 73/218 (33%), Gaps = 34/218 (15%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
+ I IV A S+ T +G IT+ + + K +Q++I+
Sbjct: 6 LVAISGIVLTFGLAACSKTVATTSGGKITESEYYSSMK-------KTSSGKQVLQQMILN 58
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ ++E G VN + + + G S F S L + + + FKQ + +
Sbjct: 59 KVLEKE---YGSKVSDKKVNEQYNTYKKQYGSS---FDSVLAQNDMTKSSFKQEIRSNLL 112
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ VK + ++ A +EY P + + +K
Sbjct: 113 LKEAVK----DNTKITDKQLKAQ--------WKEYE--------PKVTVAHILVSKKSTA 152
Query: 204 DAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLES 240
+ ++L+ +K A K D S L +
Sbjct: 153 EDIINKLKEDGSYANFKKLAKKYSTDSSTKNDGGKLAA 190
>gi|30020404|ref|NP_832035.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579]
gi|46396824|sp|Q81DT1|PRSA3_BACCR RecName: Full=Foldase protein prsA 3; Flags: Precursor
gi|29895955|gb|AAP09236.1| Protein export protein prsA precursor [Bacillus cereus ATCC 14579]
Length = 283
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ KN E + +L K IK+ ++ +
Sbjct: 121 --TVTDKDV-------KNNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L S+ G+ +F+ K ++P T G I
Sbjct: 160 DFAALANQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 220 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 266
>gi|30250138|ref|NP_842208.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
europaea ATCC 19718]
gi|30139245|emb|CAD86118.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas
europaea ATCC 19718]
Length = 630
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 21/165 (12%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIA-------------LLKLQKINGELEKIAVQELIVE 83
A + ++GE I+ + + I N ++ ++ LI E
Sbjct: 34 AGDAGYAAVVDGEEISRQEYEQAIRNQQENLRNMLGEKFDASLLDNPQMRLAVLENLIQE 93
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHA---RNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
L ++E E+ G+T + + + + S + + L +QG+ F+ +A
Sbjct: 94 RLLRREAERVGLTVLDSRLTAEIQNISFFHEDEKFSYQRYRDLLQRQGMSPAMFEARVA- 152
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
++++ + + K+ +++ Y I +
Sbjct: 153 ----GELMRQQLLEGITGSVIVPRTVAGKVASLSATMYEINRMTI 193
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 69/213 (32%), Gaps = 20/213 (9%)
Query: 112 NTGLSAEDFSSFLDKQGIGDN----------HFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+S E + + + + ++ + + + + + E+
Sbjct: 190 RMTISPEQYIDQAEPDEAAIQSYYDSHYQDFTLPERVKVEYVVLSLDELARQEQISDEEI 249
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIP-----DNKLQNQGFVQKRIKDAEESRLRLPKDC 216
++ + + E +L S+P + K + ++ ++ + +LP+
Sbjct: 250 RKYYDEHQDEFGQAEERRASHILLSVPADATEEQKTSTKARAEQILEQVRQDPEKLPELA 309
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+L + + G + + F++ + + + P T G I + +
Sbjct: 310 AELSEDPGSAKE--GGDLGFFARGLMVKPFEDEVFQMQRGEIRGPVETPFGFHIIRLTEV 367
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ G ++A + Q + A+ +L
Sbjct: 368 K--GADVAGLDDVKEQIRQLLQHQKVADRFGEL 398
>gi|261341042|ref|ZP_05968900.1| peptidylprolyl cis-trans isomerase D [Enterobacter cancerogenus
ATCC 35316]
gi|288316907|gb|EFC55845.1| peptidylprolyl cis-trans isomerase D [Enterobacter cancerogenus
ATCC 35316]
Length = 624
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/393 (12%), Positives = 112/393 (28%), Gaps = 85/393 (21%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M + T+ + + + +++ F + + SY ++ +NG+ I+ G
Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANY-AAKVNGQEISRGQFENAF 59
Query: 59 -----RIA------LLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R+ +L G L + + LI E L Q + G+ V
Sbjct: 60 AGERNRMQQQLGDQFSELAANEGYMNNLRQQTLNRLIDEALLDQYAKNLGLGISDEQVKK 119
Query: 105 F-----------------FVQHARNTGLSAEDFSSFLDKQ-------------------- 127
+ G++A+ ++ L Q
Sbjct: 120 AIFSTQAFQSNGKFDNTRYNSIVNQMGMTADQYAQALRNQLTTQQLINAVVGTDFMLKGE 179
Query: 128 -------------------GIGDNHFKQYLA-IQS-IWPDVVKNDFML----KYGNLEME 162
+ KQ ++ + W + KN F+ + ++++
Sbjct: 180 TDELAALVAQQRVVREATIDVNALAAKQQVSDAEVNAWYEQNKNSFVAPEQFRVSYIKLD 239
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLE 220
A + + ++ Y + + + K DA+ L D L
Sbjct: 240 AAALQGNASDADIQSYYDQHQDQFTQPQRNRYSVIQTKTEADAKAVLDELNKGADFATLA 299
Query: 221 KFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
K S I + G +L + + +N K + + + G + D +
Sbjct: 300 KAKSTDIISAKNGGDMGWLEAATTPDELKNAGLKDKGQLSGVIKSSVGFLVARLDDVQ-- 357
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A + + ++ + L+
Sbjct: 358 AAKTKPLAEVRDEIAAKVKQEKALDAFYALQQK 390
>gi|209543390|ref|YP_002275619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531067|gb|ACI51004.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 308
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 46/271 (16%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGITFD 98
+ ++NGE I D+ + A + Q + + +LI + + +G+
Sbjct: 49 LVASVNGEDIHLADVRQAAANMPAQLRQLPPNMIFPMLLNQLIDQKAIQAAATHAGLDKQ 108
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V A ++A +++L +Q + V+ + Y N
Sbjct: 109 P-DVQQQMHAAA----MNALQ-NAYLSQQ-VTP-TLTD---------AAVQAYYTQHYAN 151
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+ E E R +L + ++ D +L D
Sbjct: 152 KKPEA-------------EIHARHILVATEAEAKDVIKQLKA-GADFGALATKLSTDKAS 197
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDKR 276
++ + G + + D+ P F + + +T P TQ G I + D R
Sbjct: 198 AKQ--------NGGDLGWFKKGDMLPAFSDAAFAMKPHTFSQTPVHTQYGWHVIEVLDTR 249
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
++ + + I++ + V+K
Sbjct: 250 --TADVPKLDAVRDEIRQKLIQQGVRDAVEK 278
>gi|324326356|gb|ADY21616.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 283
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F + L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKKVEEAKDKMG---ENFKATLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 121 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V +L +A I
Sbjct: 220 VTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNELLKDADI 266
>gi|256845592|ref|ZP_05551050.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_36A2]
gi|294785119|ref|ZP_06750407.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 3_1_27]
gi|256719151|gb|EEU32706.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_36A2]
gi|294486833|gb|EFG34195.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 3_1_27]
Length = 563
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 91/261 (34%), Gaps = 51/261 (19%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRT--------TINGEVITDGDISKR 59
S+ F K + + +++ + ++Y + R +N + I +I +
Sbjct: 2 SIRKFRKQMKPFIIILTVVFILSLAYGGYESYKTSRANKKAQEAMLLNKDYIQKIEIER- 60
Query: 60 IALLKLQKINGELEKI------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
A L + + A ++I + L + + S+ V+ + + +
Sbjct: 61 -AKQDLSRTYADRVDKDIVDILAFNDVIDKNLTLHIAKDLKVKVPSSEVDKQYEELESSM 119
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
G E F L +G+ + K + + + +F + EI A
Sbjct: 120 G-DKEQFRRMLQVRGLTKDSLKNQIEENLLMQQ-TREEFAKNINPTDEEINA-------- 169
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
Y+ L+SIP +K + + K K AE R + +
Sbjct: 170 ----YMA---LYSIPADKKEEAVNLYKSEKGAEAFR------------------EALLKA 204
Query: 234 AQYLLESDLHPQFQNLLKKSQ 254
+ + DL P+++NL++K+
Sbjct: 205 RKEMQIKDLAPEYENLIEKTA 225
>gi|297621734|ref|YP_003709871.1| hypothetical protein wcw_1516 [Waddlia chondrophila WSU 86-1044]
gi|297377035|gb|ADI38865.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
Length = 349
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 50/335 (14%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWA-----MSSRIRTTINGEVITDGDISKRIALLK 64
S F+ L+ F+L V S +++RI ING+ I+ D+ K++ +
Sbjct: 4 SIFLTLVAALFMLGQLAAVSANSMFLAQPKHIFVNNRILAKINGQPISVIDVMKQMDMFF 63
Query: 65 LQKINGELE-------------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
++ K A+++LI + L K + ++ + V
Sbjct: 64 YRQFPQYANSPEARYQFYNMSWKRALEDLIDKELIKADAKEVNLPMTHGEVRQEIENIFG 123
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML---KYGNLEMEIPANKQ 168
+ LDK G+ ++ ++ + +M + K
Sbjct: 124 PN------IIANLDKAGLTYEEAFDLTKEDILFKKMMMARVNSIVLRSITPQMVVDHYKT 177
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQ-----KRIKDAEESRLRLPKDCNKLEKFA 223
+ + E I V+ + + R KD E S+L+ ++ +
Sbjct: 178 WAEQNSQPEKWIYQVISVRGGSNEASSTIANTVHHLLRDKDVELSQLKSLLHPDEFKL-- 235
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPY-------VTQKGVEYIAICDK 275
S+ + L S++ ++ +L + P T + +
Sbjct: 236 -----CSVSQEYSLSPSEISDSYREILSLLKPGAFSEPIAQKSRASKTDV-YRIFYLKEI 289
Query: 276 RDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKL 308
G + L Q ++ +A+Y+ +L
Sbjct: 290 EKGGAPSFYEIQNRLRDQLVEKEMATEQAKYLSRL 324
>gi|291296508|ref|YP_003507906.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber
DSM 1279]
gi|290471467|gb|ADD28886.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber
DSM 1279]
Length = 305
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 33/312 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKIN----------GE 71
++F I + S + A S + T+ IT + R L ++ +
Sbjct: 6 LLFLITALGSL-AVAQSDPVVATVANTTITKSQLELRFGLYIRDSERQNGLSYSEEALAA 64
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+K ++ + E + E +G + V + + S E F+ L + GI
Sbjct: 65 LKKRFLELVARERAIILKAEAAGFAASKDDVQAAVAEVKADFD-SEEAFTQALKEAGIPS 123
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ ++ + N ++ + + YL+ F++P +
Sbjct: 124 ----LEVYHTLVYEALTYNAYLEHLLKQLKTSEPALRLL-------YLVSKSQFALPK-R 171
Query: 192 LQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
+ + ++A + RL K L + SK G F+
Sbjct: 172 YCSAHILVDTAQEAYQVIARLGKGEKFADLARALSKDPGSKEEGGDLGCEPRGTFVAPFE 231
Query: 248 -NLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
L+ ++ P T+ G I + KR + A+ T +
Sbjct: 232 LALVALQPGESSKVPVKTEFGYHIILL--KRVEAAGFQGFEEVRAELDQTIRNSAVYRLL 289
Query: 306 KKLRSNAIIHYY 317
+ + I +
Sbjct: 290 LWIEKSTPIQLF 301
>gi|326940021|gb|AEA15917.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 283
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 121 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 220 VTDKKELKPFDEVKEKIRKDLEQQRLQDTTGKWKQQVVNDLLKDADI 266
>gi|257459731|ref|ZP_05624840.1| foldase protein PrsA 2 [Campylobacter gracilis RM3268]
gi|257443156|gb|EEV18290.1| foldase protein PrsA 2 [Campylobacter gracilis RM3268]
Length = 274
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 88/306 (28%), Gaps = 47/306 (15%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
F + + ++ A + T ITD D++ +A +Q E +
Sbjct: 6 SFSFVAAMAISSLNAGVLATAKDANIT-----ITDEDVAPFLA-QGMQHGGQEPTADEKK 59
Query: 79 ELIVETLKKQ----EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+LI + +K + E +KSGI L K GI N
Sbjct: 60 KLIDDLIKYKLLIAEAKKSGIENSDEY---------------KHQLE--LAKDGIAFN-- 100
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+W D + + NKQ +L + D K
Sbjct: 101 --------LWQREQAKDVSVSDEEAKKIYDENKQNFMQPDS--VTASHIL--VADEKAAK 148
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKS 253
+ E + K ++ S + G + + P+F+
Sbjct: 149 NAIAKLSKVKKENLKEEFNKLAKEISIDPSAKEN--GGDLGSFGKGMMVPEFEKAAFALK 206
Query: 254 QNNTT-NPYVTQKGVEYI--AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P TQ G I K + +K + Q P+K+ K + +L
Sbjct: 207 DGEMSKTPVKTQFGYHVIYKESSKKAETMPFEKVKDLIKNQLLPSKVNKKIDDKANELFG 266
Query: 311 NAIIHY 316
I Y
Sbjct: 267 KLNIEY 272
>gi|253681183|ref|ZP_04861984.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum D str.
1873]
gi|253562619|gb|EES92067.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum D str.
1873]
Length = 246
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 88/282 (31%), Gaps = 41/282 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +++ +NG+ IT+ DI I ++ + ++L+ + + + G
Sbjct: 1 MENKVLAKVNGKEITERDIEVAIKRFPQERQAYFAGEQGRKQLLDQLVAFELFYAYG--- 57
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
N ++ ++F G K+ Q V+ +K
Sbjct: 58 KENELD------------KTQEFID-------GIEIMKKDALTQMSVNKVLS---EVKVT 95
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ E+E K + + +L N+ K +++ +
Sbjct: 96 DKEVEDYYTANKKNFVVGETVSAKHILV-------DNEELANKI-----AEKIKDGMSFD 143
Query: 218 KLEKFASK-IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ K S G + P+F+ + P TQ G I + DK
Sbjct: 144 EAAKEYSTCPSKAQGGNLGRFGRGQMVPEFEEAAFNLEIGKLSEPVKTQFGYHLIEVEDK 203
Query: 276 RDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +K + A + +V++L++ +
Sbjct: 204 NEATEKSFNEVKDMIKANLIQQRQTAKYTTFVEELKNKYNVE 245
>gi|157690981|ref|YP_001485443.1| peptidylprolyl isomerase [Bacillus pumilus SAFR-032]
gi|157679739|gb|ABV60883.1| possible peptidylprolyl isomerase [Bacillus pumilus SAFR-032]
Length = 256
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 22/163 (13%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQ 88
++ T+N + IT + + ++ ++ Q ++K + L+ + L Q
Sbjct: 66 QKVVATVNQDKITGNEYNSALSTIQGQLQQSGQDPTSKEGAKAVKKQTIDALVGQELILQ 125
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ EK GI V+ + + F L K G+ + K +A + V
Sbjct: 126 DAEKKGIKASDKEVDKQLKEEKKQFK-DNAQFEEALKKSGLTMDQLKSDIADSIKYSQYV 184
Query: 149 KNDFMLKYGNLEMEIPA---------NKQKMKNITVREYLIRT 182
+ E ++ A KQK K +E +
Sbjct: 185 DKEIKS-ASVSEKDVKAYYDQYADEMKKQKQKAPEYKEVKSQI 226
>gi|307244093|ref|ZP_07526212.1| putative peptidylprolyl isomerase PrsA1 [Peptostreptococcus
stomatis DSM 17678]
gi|306492617|gb|EFM64651.1| putative peptidylprolyl isomerase PrsA1 [Peptostreptococcus
stomatis DSM 17678]
Length = 353
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 104/311 (33%), Gaps = 37/311 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL----------------- 65
+ + +V + A SS +++G+ I+ + +++ KL
Sbjct: 5 LAILLAAVVGLSTVACSSDDVASVDGKGISKKEYIEQLKFTKLMYEMQYGDKIWDQMKSQ 64
Query: 66 -QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE--DFSS 122
++ ++K +Q ++ + EK+ + D Q+ + + E
Sbjct: 65 NKEYQETVKKNVLQSMVKSRVYLSYAEKNNVKPDEK----VLSQYKKKNKEAFENAKAKE 120
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+K GI F + Q+ + N K E E+ A + + +
Sbjct: 121 KFEKAGID-QAFMDKYSEQAATMTSLLNFLQKKAMPTEEEVKAKFETEGD----KLDASH 175
Query: 183 VLFSIPD--NKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFASKIHD--VSIGKAQY 236
+L D NK + + K AE+ +L+ D +L K S+ G
Sbjct: 176 ILIKTVDDNNKPLSDEKKAEAKKKAEDLLKQLKSGTDFAELAKKNSQDPGSAAKGGALGE 235
Query: 237 LLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+ + +F+ + + TQ G I + +KR K +
Sbjct: 236 FGKGQMVSEFEKAAFALKEGEISPIVETQFGYHIIKL-NKRVKADYEKSKDKIKTSLINE 294
Query: 296 KIEKHEAEYVK 306
KI+K E VK
Sbjct: 295 KIKKLVDEIVK 305
>gi|189499340|ref|YP_001958810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides BS1]
gi|189494781|gb|ACE03329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides BS1]
Length = 701
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 185 FSIPDNKLQNQGFVQKR-IKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYLLESD 241
IP +K G + R + + +R K L S+ + G + +
Sbjct: 350 ILIPFSKGDVSGEKEARGLAEKIMQEIRSGKKFADLAMQYSQDPGSAANGGDLGWFSRTA 409
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ P+F ++ + + P TQ G+ I + K D + + + + +E
Sbjct: 410 MVPEFAQVVFRAATGTLAGPVETQYGLHIIKVTGK-DNSAIACSEIVRNIRPSGATLENA 468
Query: 301 EAE 303
+
Sbjct: 469 RRK 471
>gi|296876819|ref|ZP_06900867.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis
ATCC 15912]
gi|296432321|gb|EFH18120.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis
ATCC 15912]
Length = 314
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/306 (11%), Positives = 98/306 (32%), Gaps = 36/306 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ V ++ +V+ + A S+ + T+ G+ IT D +++ G +
Sbjct: 1 MKKKLVAGAVTLLSVVTLAACANSTNKDVVTMKGDTITVSDF-----YDEIKSNQG--AQ 53
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ++ + + ++E G V+ + A+ F ++L +QG+ +
Sbjct: 54 QVLFQMTINKVFEKE---YGSKISDKEVDK---ELAKQKKQLGNQFDAYLAQQGLTEETA 107
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
K+ + + V + + + + + +
Sbjct: 108 KKQIRSNMLLEYAVSQAAKKDIKESDYKTAFESYTPE--------VTAQIIKLDSEDKAK 159
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKS 253
+ + + A+ +++ + K G +D+ Q + K
Sbjct: 160 EVLEAAKAEGADFAKIAKDNSTDTATKDKGGEVKFDSG------TADIPSQVKEAAFKLD 213
Query: 254 QNNTTNPYVTQKG------VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+N ++ G + + K + G + K + + K + Y++
Sbjct: 214 ENGISDVITVSAGQNYSASYYIVKLNKKTEKGSDW-KKYEKRLKEIIIEGRKQDTNYIRS 272
Query: 308 LRSNAI 313
+ + A+
Sbjct: 273 IIAKAM 278
>gi|167465135|ref|ZP_02330224.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 246
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 84/255 (32%), Gaps = 28/255 (10%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
+ V+++ C V + + + + I I GD+ + L G +
Sbjct: 15 SLAVVVLVCFVIFGFTGAASGNGTVVAEIGKTKIRKGDLEQN-----LITHYGSS---VL 66
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL-DKQGIGDNHFKQ 136
+++ K E + +G+ ++ S E F + ++ G+ K
Sbjct: 67 NQMLDREAIKMEAQSAGLQISDADIDKELKVM-MQAYESEEVFYQSMKEQLGMSRQEVKD 125
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + + V D + ++ I A+ + RE +R V + +
Sbjct: 126 DVYYKLLLEKVATKDIQVSDSEIQDYIQAH--PEEYAKKREMHLRRVTTKTREQANKVVA 183
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-- 254
K A+ +R R D + G ++ E D + ++K+++
Sbjct: 184 AFSKGDDFAKLARDRSIDDYAN-----------NGGDLGWVKE-DDPLTDKQVMKQAKDL 231
Query: 255 --NNTTNPYVTQKGV 267
+ P T +G
Sbjct: 232 KVGQISKPVQTNEGY 246
>gi|194017414|ref|ZP_03056025.1| putative peptidylprolyl isomerase [Bacillus pumilus ATCC 7061]
gi|194010686|gb|EDW20257.1| putative peptidylprolyl isomerase [Bacillus pumilus ATCC 7061]
Length = 257
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 22/163 (13%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQ 88
++ T+N + IT + + ++ ++ Q ++K + L+ + L Q
Sbjct: 67 QKVVATVNQDKITGNEYNSALSTIQGQLQQSGQDPTSKEGAKAVKKQTIDALVGQELILQ 126
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ EK GI V+ + + F L K G+ + K +A + V
Sbjct: 127 DAEKKGIKASDKQVDKQLKEEKKQFK-DNAQFEEALKKSGLTMDQLKSDIADSIKYSQYV 185
Query: 149 KNDFMLKYGNLEMEIPA---------NKQKMKNITVREYLIRT 182
+ E ++ A KQK K +E +
Sbjct: 186 DKEIKS-VSVSEKDVKAYYDKYADEMKKQKQKAPEYKEVKSQI 227
>gi|228908084|ref|ZP_04071932.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
gi|228851502|gb|EEM96308.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
Length = 293
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ K+ E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KDNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQLSEPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|296112972|ref|YP_003626910.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis RH4]
gi|295920666|gb|ADG61017.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis RH4]
Length = 307
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHD 228
++ +R +L + P + + + ++K+ + +S R ++++
Sbjct: 144 VSTPIMTLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSK 203
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G+ L + P+F++ + + NP T+ G+ I + K++ +AY
Sbjct: 204 DDGGELGVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAY 263
Query: 288 --LSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ +Y+ +L A I
Sbjct: 264 PIIENHLKQQSFHHSLCDYLFELSQKADI 292
>gi|312171578|emb|CBX79836.1| putative protease maturation protein [Erwinia amylovora ATCC
BAA-2158]
Length = 623
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 85/282 (30%), Gaps = 39/282 (13%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+ I+ + R ++ ++ + A+ +LI E L
Sbjct: 42 AAKVNGQEISRAQFERAFSSERARQQQMLGEQFSVLAGNDGYMQQMRQQALSQLIDEMLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF-----LDKQGIGDNHFKQYLAIQ 141
Q + G+T + + + +A F + ++ G + + + L Q
Sbjct: 102 TQYAKDIGLTISDDQIKQAI--FTQPAFQTAGKFDNAKYIIIINNMGFTADQYAEALRKQ 159
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+++ + + + + ++ L+R V ++ + ++
Sbjct: 160 LTTQQLIE-----SVTGTDFVLGNEADSLAALVAQQRLVREVTINVNALAAKQNVTQEEI 214
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
++ + L + A + + Q+ +K Q + T P
Sbjct: 215 ANYYQQHQSSLMSSEQFRVSYIKM-------DAATMQQPVSESDIQSWYEKHQGDYTQPQ 267
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + I K + L + ++ A+
Sbjct: 268 RNRYSI----IQTKTEAEARSVLDVLKKGGDFARLAKEKSAD 305
>gi|302879437|ref|YP_003848001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella
capsiferriformans ES-2]
gi|302582226|gb|ADL56237.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella
capsiferriformans ES-2]
Length = 261
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/287 (17%), Positives = 93/287 (32%), Gaps = 49/287 (17%)
Query: 34 KSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ +N I+ +++ + AL + Q EL K + +LI + Q
Sbjct: 19 NPAFAEDKSAAVVNKVAISQERVEMNVKSALAQGQADTPELRKAILDDLINREVMAQAAT 78
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
SG+ ++ V L KQ + N F Q +
Sbjct: 79 ASGLDKSADVVQQI-----------------NLAKQTVLINAFVQ--------------E 107
Query: 152 FMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ K + ++ A + +K + +EY R +L + + K +
Sbjct: 108 QLKKNPVTDAQLQAGYETLKSKLGDKEYSARHILVATEAEARNLIAQLGK--------KA 159
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVE 268
+ K K + S G + + + F N LL + T +P TQ G
Sbjct: 160 KFEKLAEKSKDTGSAERG---GALGWTVPKNFVEPFANALLNLKKGEYTKDPVQTQFGWH 216
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
I + D R L + + Q ++ + + LR+ A I
Sbjct: 217 VIKLDDMRALK--VPSFDEIKPQLLQRLQQQAIQKIITDLRAAAKID 261
>gi|291277225|ref|YP_003516997.1| major antigenic peptide PEB3\cell binding factor 2 [Helicobacter
mustelae 12198]
gi|290964419|emb|CBG40269.1| major antigenic peptide PEB3\cell binding factor 2 [Helicobacter
mustelae 12198]
Length = 278
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 40/280 (14%)
Query: 44 TTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+++ ++IT+ D + ++ K+ E + + + + E L ++ +K +
Sbjct: 26 ASVDDQIITEKDFDVLKQQAPDFDFNKLTTEQKNGLINQKVNEILIEKAAKKEKLDQT-R 84
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
K+ L +Q W V
Sbjct: 85 EYQEALENI-------------------------KKQLLLQ-AWQHNVAEQAKKTVIPEA 118
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL--RLPKDCNK 218
K +E R +L + + + K A +SR+ + + NK
Sbjct: 119 EVKKFYDDNPKQFIQQEGHARHILVKTKEEAEKIIAELNK----APKSRVEQKFIELANK 174
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKR 276
+ + G + + P+F + + S N T P TQ G + + K
Sbjct: 175 YTTDPNAKKAQNGGDLGTFQRNQMVPEFGDAVFALSPNTYTKTPVKTQYGYHVVYLIKKG 234
Query: 277 DLGGEIALKAYLSAQNT--PTKIEKHEAEYVKKLRSNAII 314
+A + +N K ++ + ++ LRSNA I
Sbjct: 235 SPKTISFAEAKPTIENMFKERKFQEMAQDKIQHLRSNAKI 274
>gi|302345884|ref|YP_003814237.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC
25845]
gi|302149581|gb|ADK95843.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC
25845]
Length = 474
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 92/293 (31%), Gaps = 54/293 (18%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE--- 79
+I + + + ++ + TING+ ++ + G ++K +V E
Sbjct: 5 VILSALLLSTTMAYGQTDPTIMTINGQPVSRSEFEYSYN---KNNAEGVIDKKSVDEYVD 61
Query: 80 -LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-FLDKQGIGDNHFKQY 137
I LK Q + + + F FL + Q
Sbjct: 62 LFINYKLKVQAALDAHLD-------------------TLSSFKKEFLSYRN-------QQ 95
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ I V+ + Y + ++ AN + +L + N +
Sbjct: 96 VRPTFITDADVEAEGRKLYREAQQQVEANGGM--------WNCAHILIGLYQNADKEAAE 147
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQ 254
K++ D+ + LR D +L K S + + G+ +L + P+F+ L
Sbjct: 148 AAKQLADSLYNALRGGADFAELAKKYSTDVNSAMNGGQLLHLQKGQTVPEFEKALFALKP 207
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL---------SAQNTPTKIE 298
+ P ++ G I + + L+ + Q K++
Sbjct: 208 GEISAPVLSPFGYHIIKMGGRESFPTYETLRPEIMQYIEMQGLREQIIDQKLD 260
>gi|228952655|ref|ZP_04114731.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229079483|ref|ZP_04212023.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|229178680|ref|ZP_04306044.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228604838|gb|EEK62295.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228703853|gb|EEL56299.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|228807121|gb|EEM53664.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 293
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ K+ E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KDNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|212640109|ref|YP_002316629.1| Parvulin-like peptidyl-prolyl isomerase (molecular chaperone)
[Anoxybacillus flavithermus WK1]
gi|212561589|gb|ACJ34644.1| Parvulin-like peptidyl-prolyl isomerase (molecular chaperone)
[Anoxybacillus flavithermus WK1]
Length = 288
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 77/246 (31%), Gaps = 34/246 (13%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
K +++L+ E + + +N G+ + + + G +
Sbjct: 60 KDVLRDLVHEKVLSK-----KFKVTDEELNKEIENLKEMYGI---QYDLAVQQNG--EEA 109
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + + + + M + E+ + K P K
Sbjct: 110 IRDMVKLDL----LRQKAAMEDIKVTDEELKKYYNEYK----------------PKVKAS 149
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-L 250
+ ++ +++L +D KL K SK + G + + +F+
Sbjct: 150 HILVDDEKTAKDIKAKLEKGEDFAKLAKEYSKDTGSAQNGGDLGWFGPGKMVEEFEKAAY 209
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLR 309
+ ++P TQ G I + DK +K + + +K++ + + +L
Sbjct: 210 ALNVGEISDPVKTQFGYHIIKVTDKEKKKSFDEMKEEIEFEVKKSKLDTSKVQSKLDELM 269
Query: 310 SNAIIH 315
A +
Sbjct: 270 KEANVD 275
>gi|319941473|ref|ZP_08015801.1| hypothetical protein HMPREF9464_01020 [Sutterella wadsworthensis
3_1_45B]
gi|319805093|gb|EFW01923.1| hypothetical protein HMPREF9464_01020 [Sutterella wadsworthensis
3_1_45B]
Length = 261
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 96/305 (31%), Gaps = 50/305 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGEL 72
++ + VL + V +V + A++ T+NGE + + A+ K EL
Sbjct: 1 MIKSKLVLALALSVGLVGSAAAALTD---MTVNGEKVPASRLEAVYNNAVKAGAKAGPEL 57
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E +++ E + QE K+ I + + + +
Sbjct: 58 EARVKRDVTEEVVLLQEAAKAKID-RTKEYRDAIDRVGKQLKV----------------- 99
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNK 191
+++ D+ K + E+ A K + EY +R +L
Sbjct: 100 -------------ELLVADYAKKNPVSDKEVRAAYDNAKKVYGDTEYQVRHILVKT---- 142
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q + +R+ E+ D + + G +L S++ P F N K
Sbjct: 143 EQEAKNIIQRLNKGEKF------DALAKSESLDPKSGPAGGLIGWLSPSNVEPNFGNAFK 196
Query: 252 -KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
S + P Q G I + KR ++ + + + +L
Sbjct: 197 ILSAGDVAQAPIQNQFGWHVIKLDAKRSQKNFPTYESQ-KDSLRAQLSQLNAKRHFAELV 255
Query: 310 SNAII 314
A +
Sbjct: 256 QKAKV 260
>gi|332295221|ref|YP_004437144.1| hypothetical protein Thena_0367 [Thermodesulfobium narugense DSM
14796]
gi|332178324|gb|AEE14013.1| hypothetical protein Thena_0367 [Thermodesulfobium narugense DSM
14796]
Length = 178
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEK 74
VL+ F +V +V K ++ T+NG IT + L + K N +L+K
Sbjct: 1 MKRIVLLCFVLVFVVMVKPSFADDKVLATVNGTSITQSQVDAIYNNLPPNVDKTNPDLKK 60
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ LI + E +K G+ D +
Sbjct: 61 EILNRLIENLVLLDEAKKEGLENDPKVIEA 90
>gi|229069842|ref|ZP_04203124.1| Foldase protein prsA 1 [Bacillus cereus F65185]
gi|228713245|gb|EEL65138.1| Foldase protein prsA 1 [Bacillus cereus F65185]
Length = 293
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ K+ E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KDNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L + S+ G+ +F+ K + P T G I
Sbjct: 170 DFAALARQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|120602307|ref|YP_966707.1| hypothetical protein Dvul_1261 [Desulfovibrio vulgaris DP4]
gi|120562536|gb|ABM28280.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
Length = 328
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/311 (9%), Positives = 86/311 (27%), Gaps = 42/311 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----- 69
+L VL + ++ A+ + T+NG + + LL+
Sbjct: 11 VLAVLQVLAVTLLLSAGGCADDALPPGVVATVNGHPV-------NMKLLQATHDAYAQSW 63
Query: 70 --------GELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L + +L+V+ L Q++ G + + +
Sbjct: 64 TGAEGPSVEALRSQYGAVLADLVVQELVLQKLAAVGASVTDAELGAAEAEV--RGDYPEG 121
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
F + L + + +++ L + + + E+ + + +
Sbjct: 122 MFEAALVEDYLDLEVWREMLRRRLALTKFAQVVLRSEVAISLEEVESWYRAHQGEFRLAA 181
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+R + V+ ++ E+ E+ +S +
Sbjct: 182 RVRFI-------------MVEGDTREGVEAATGAVASGAAPEEVEKAFPGMSGNELLIRR 228
Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPT 295
+ + +Q L + P + + + + AY + +
Sbjct: 229 D-RIPAAWQKALAALKPGGVSPPIAFEGRWVAFRLIESLPAQDMSVVDAYPVIERRLLEE 287
Query: 296 KIEKHEAEYVK 306
K++ +V+
Sbjct: 288 KLDAAFDVWVE 298
>gi|146307082|ref|YP_001187547.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina ymp]
gi|145575283|gb|ABP84815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
mendocina ymp]
Length = 615
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/392 (12%), Positives = 104/392 (26%), Gaps = 91/392 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57
M + + +I + ++++ + + + +NG+ IT +++
Sbjct: 1 MLQNIRDNSRGWIAKIIIGLIVMLMAFTGFEAIVTGTSNRNNAAEVNGDTITLNELNTAV 60
Query: 58 --KRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
+R LL+ + + L + +++ LI L Q + F ++ +
Sbjct: 61 EMQRRQLLQQLGRDFDASLLDDKLLREASLKGLIERKLLLQAAGDADFAFSQAALDQVIL 120
Query: 108 Q---HARNTGLSAEDFSSFLDKQGIGDNHFKQ---------YLAIQSIWPDVVKNDFMLK 155
Q + A F + + G F+Q L V
Sbjct: 121 QTPEFQVDGRFDAARFDQVIRQMGYSRLQFRQMLEEEMLIGQLRAGLGASSFVTEQDARA 180
Query: 156 YGNLEMEIP--ANKQKMKNITVRE---------YLIRTVLFSIPDNKLQN---------- 194
+ NLE + A+ + E Y F P+ +
Sbjct: 181 FANLERQTRDFASVTIKADPAAVELADSDVQAYYDEHASEFMSPEQVVLEYVELHKDSFF 240
Query: 195 ------------------QGFVQKRIK----------------DAEESRLRLPKDCNKLE 220
++R + ++R+ +D L
Sbjct: 241 DQIEVSDDDLQPLYESEIANLAEQRQAAHILIEGDDAAARTKIEEIKARVDAGEDFAALA 300
Query: 221 KFASKIHD--VSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR- 276
K S+ G Y P F+ L Q + P + G I + +
Sbjct: 301 KEFSEDPGSAADGGDLGYAGPGVYDPAFEEALYALQTGQVSEPVRSDFGWHLIKLLGVQA 360
Query: 277 ------DLGGEIALKAYLSAQNTPTKIEKHEA 302
D + + AQ + +
Sbjct: 361 PEVPSFDSLKDKLAR-DFKAQQVEQRFVEATK 391
>gi|294788519|ref|ZP_06753761.1| putative peptidyl-prolyl cis-trans isomerase [Simonsiella muelleri
ATCC 29453]
gi|294483396|gb|EFG31081.1| putative peptidyl-prolyl cis-trans isomerase [Simonsiella muelleri
ATCC 29453]
Length = 609
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 53/401 (13%), Positives = 114/401 (28%), Gaps = 96/401 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKR 59
M K+F S+ LI + + + S+ +++ I ++IT +
Sbjct: 1 MKIKMFASIEKHRTTAQVLLALIGISFIGFGASQFSFGSNNQYIVKIGDQIITRYQLD-- 58
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-------------- 105
++ G + ++L+ + ++ G++ +
Sbjct: 59 ---NAVRANQGATREAVFRQLMNRAYLTEGAKQLGLSISETELKQSIVNNKNFHDANGKF 115
Query: 106 ----FVQHARNTGLSAEDFSSF------------------------------------LD 125
F Q + GLS + F +
Sbjct: 116 STELFKQILASNGLSEQQFLESERETLLLESIGKILGSNVVADSQVAQFLNSTMAMRKIR 175
Query: 126 KQGIGDNHFKQYLAIQ--------------SIWPDVVKNDFM--------LKYGNLEMEI 163
G+ F+ + I P V+ +F+ K + E+
Sbjct: 176 NVGVNPQAFESKVKIDDASLKKFYDANQKSYTLPQAVQFEFVRFSPQTLAEKETVSDEEV 235
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+Q ++N + + I +L NK + + QK K+A+ + + + K + +
Sbjct: 236 KQAQQDVQNSSTNKREIAHILIPFGSNKDKAKEEAQKIAKEAQANPDKFAELAKKYSQDS 295
Query: 224 -SKIHDVSIGKAQYLLESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIA------ICD 274
SK IG+ + + +L + ++ + G I
Sbjct: 296 DSKDKSGIIGE--FSAQGNLVNDAFKKAAFGVESGGVSDVVESNFGYHIIRAKNLGNATA 353
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK---LRSNA 312
D A K + Q E+ A L+ A
Sbjct: 354 SDDTAARDAAKLKKAQQTYTKLREELSAAAFDDSGSLKKAA 394
>gi|218297017|ref|ZP_03497694.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermus aquaticus
Y51MC23]
gi|218242572|gb|EED09109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermus aquaticus
Y51MC23]
Length = 603
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/318 (10%), Positives = 89/318 (27%), Gaps = 34/318 (10%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKI 75
++ I+ + +NG+ + + D LL+LQ + +
Sbjct: 17 ALAFVVGAILLFTPQAGQEAKGKPVLWVNGKAVYELD------LLRLQGNDPLYAANPQG 70
Query: 76 AVQELIV----------ETLKKQEIE-KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ L+ E LK+ + G V+ Q+ + E F L
Sbjct: 71 LLKVLVDTHFLEQVILTEALKQDAARIRVGSAEVRKEVDRIREQYGLRDKKAYEQF---L 127
Query: 125 DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
++ G D + + Q I + + K E+ + T R +
Sbjct: 128 NQIGYTDAQLRAEIKAQLQIQKRLEQVRSSAKPTPEEVRFYFEVHQEDYKTEPRVQARQI 187
Query: 184 LFSIPDNKLQNQGFVQKRIKDA-EESRLRLPK-DCNKLEKFASKIHDVSIGKAQYLLESD 241
+ + D K+ + + + + + K + + + + ++
Sbjct: 188 V--VDDKKVAEEVLAKAKAGEDFTALAKKYSKVGAEQGGALGAAPGESAPKPVTKVV--- 242
Query: 242 LHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ + + P + + + + + +
Sbjct: 243 FPEKVAEAVFALKGPGLVGPIEAGGRYYIVKVEAYLPPKVPTFEEVKDQVEKDAGDAKAN 302
Query: 301 E--AEYVKKLRSNAIIHY 316
Y++ LR A + +
Sbjct: 303 GALEAYLEDLRKKAQVRF 320
>gi|223939125|ref|ZP_03631008.1| hypothetical protein Cflav_PD1553 [bacterium Ellin514]
gi|223892174|gb|EEF58652.1| hypothetical protein Cflav_PD1553 [bacterium Ellin514]
Length = 329
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/325 (11%), Positives = 107/325 (32%), Gaps = 43/325 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIALL 63
+S ++ + ++P+ + S ++S + + IT D + +
Sbjct: 3 MSSQRIIANRCRVAVIISLLAMLPLFAGCSKKVVVNSPVLAKVGSREITTADFEQEVQWR 62
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ + ++ +QE+I+ L Q+ + +G+ + V + + +S
Sbjct: 63 IKTQRSLPDKQALLQEMILHELNLQKAKVAGLE-NDAEVRRTYEDVLV-ARVKETQLTSR 120
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
L+ + + ++ + + +I + K Y
Sbjct: 121 LEAVKVSADE--------------IRAAY-------DRDIAKYTRPAKAKLALIY----- 154
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLL 238
+ + + ++ R+ +A++ L + A D G +
Sbjct: 155 IKANSKLSAEKIAELEGRMHEAQKQAHTLATATPGFGRIAVDFSDDQPSRYQGGDVGWYD 214
Query: 239 ESDLHPQFQNLLK------KSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSA 290
E + ++ + K++ ++ T G + D RD + +A +
Sbjct: 215 EGLVEYRWPKEVVAAGFALKAKGEISDVIKTADGFYLVMKLDLRDQVITPLEQAQASIER 274
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
+ K + E +V+++R+ A +
Sbjct: 275 RLLSEKRRQLEETFVREMRAFAPVQ 299
>gi|226309691|ref|YP_002769585.1| foldase protein PrsA precursor [Brevibacillus brevis NBRC 100599]
gi|226092639|dbj|BAH41081.1| putative foldase protein PrsA precursor [Brevibacillus brevis NBRC
100599]
Length = 355
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 65/187 (34%), Gaps = 20/187 (10%)
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEIPANKQKMKNITVR 176
F+ +D QG+ K + Q D++ + K + + +M +
Sbjct: 156 AQFNKLMDGQGVT----KDMILNQM---DLINQSINVMKKNIDDATLKQTYDQMDKASRT 208
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKA 234
+R +L S + +I + E+RL+ +D KL + S G
Sbjct: 209 VASVRHILISTEKRTPEEA----LKISNDLEARLKKGEDFAKLATEFTDDPGSKQSGGLY 264
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ + P+F+ L + P T G I + ++++ + + Q
Sbjct: 265 ENADVTQWVPEFKEASLTQKVGEVGPPVKTNFGYHIIKVENRKEKTFD-----EMKEQLR 319
Query: 294 PTKIEKH 300
+ +EK
Sbjct: 320 ASSLEKA 326
>gi|83591735|ref|YP_425487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum
rubrum ATCC 11170]
gi|83574649|gb|ABC21200.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodospirillum
rubrum ATCC 11170]
Length = 308
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/316 (12%), Positives = 98/316 (31%), Gaps = 56/316 (17%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS-SRIRTTINGEVITDGDISKRIALLKLQKIN-- 69
+ L +P+ + + A + +NG + + +R A L+ +
Sbjct: 2 MSPRARRLALAGVLALPLFAGPALAADPDPVVAVVNGADVHLSAVQERFAELQASQPQLG 61
Query: 70 ----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ + + ++ L + K+G+ + V + + L A + +
Sbjct: 62 GLPLAMVYEQLLNSVVEAELVTEAGRKAGL-ANDPEVKHRLDRLLDR--LIAGAYMQKVV 118
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+ + D K + +K +F + +E R +L
Sbjct: 119 DEDVTDAAVKARY-------NEMKAEFKPE--------------------KEVHARHILL 151
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL-HP 244
D + ++K A+ ++L + ++ + G + + + P
Sbjct: 152 ETEDAA---KDAIKKIEGGADFTKL--------ASELSTGPSAQTGGDLGFFTKDRMVAP 200
Query: 245 QFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHE 301
+ + P T+ G I I + RD + + + +EK+
Sbjct: 201 FAEAAFAMKVGEVSKAPTKTEFGWHVIKIEEVRDTTFPPVEEMESHIRDELANAAVEKN- 259
Query: 302 AEYVKKLRSNAIIHYY 317
V L+ +A + +
Sbjct: 260 ---VAGLKESAKVKLF 272
>gi|148544489|ref|YP_001271859.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus
reuteri DSM 20016]
gi|184153854|ref|YP_001842195.1| peptidylprolyl isomerase [Lactobacillus reuteri JCM 1112]
gi|227363083|ref|ZP_03847219.1| peptidylprolyl isomerase [Lactobacillus reuteri MM2-3]
gi|325682810|ref|ZP_08162326.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri MM4-1A]
gi|148531523|gb|ABQ83522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lactobacillus
reuteri DSM 20016]
gi|183225198|dbj|BAG25715.1| peptidylprolyl isomerase [Lactobacillus reuteri JCM 1112]
gi|227071904|gb|EEI10191.1| peptidylprolyl isomerase [Lactobacillus reuteri MM2-3]
gi|324977160|gb|EGC14111.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus reuteri MM4-1A]
Length = 312
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 29/254 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T +G IT+ + + K +Q++I
Sbjct: 6 LIAIIAGVALMMPLAACGNKAVATTSGGKITESEYYSSMK-------QTSAGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + + ++ G VN + + G DF+++L Q + + KQ +
Sbjct: 59 LDKVLE---KQYGKEVSDKQVNAQYNTYKNEYG---SDFNAYLQSQNLTEKSLKQQIRSN 112
Query: 142 SIWPDVVKNDFMLKYGNLEME---IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ ++ + + + Q + + ++ + D+ + + F
Sbjct: 113 LLLTAAARHYSHITTKQINKQWTKYQPKVQTATILVGSKSDAEDIINQLNDSSNKYKTFK 172
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ + +S+ + D + KA + L K+ TT
Sbjct: 173 KLAKSKSTDSQTKNNGGKLPAFDNTDNQLDSAYKKAAFKL-------------KTGEYTT 219
Query: 259 NPYVTQKGVEYIAI 272
P T G + I +
Sbjct: 220 TPVKTDDGYQVIYM 233
>gi|313158136|gb|EFR57541.1| PPIC-type PPIASE domain protein [Alistipes sp. HGB5]
Length = 468
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 83/267 (31%), Gaps = 37/267 (13%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKING------ELEKIAVQELIVETLKKQE 89
M ++ + I +++ L Q+ + A++ L+ + L +
Sbjct: 24 QVMLDKVVAVVGSSSILYSEVADHARQLTAQRRAEGYTSDRDPMNEALEALMTQKLLFNQ 83
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD--------------NHFK 135
+ + ++ + E + ++ +G + +
Sbjct: 84 AQIDSVKINAGDIASHVE----------EQVQNMIEAEGSIPRLEAKHHMAIFNIRENMR 133
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMKNITVREYLIRTVLFSIPDNKL 192
Q Q + ++N+ + K + E+ + K T+ E + + P +
Sbjct: 134 QRYEEQ-SYASSMQNEVVSKVAVIPGEVERFYKSIDKDSLPTIAEQYVYAQITRFPKSIT 192
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLL 250
Q + ++R+ D E + L + S+ G+ + L F L
Sbjct: 193 QAKQRTRERLLDMRERVITGKAKFENLARMYSQDPGTMMRGGEMDPAPLASLDSSFAAAL 252
Query: 251 KK-SQNNTTNPYVTQKGVEYIAICDKR 276
+ + +Q G I + DKR
Sbjct: 253 ENMKPGQISEVVESQFGFHIIQMLDKR 279
>gi|237714321|ref|ZP_04544802.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1]
gi|262408154|ref|ZP_06084701.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645120|ref|ZP_06722845.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CC 2a]
gi|294809728|ref|ZP_06768415.1| PPIC-type PPIASE domain protein [Bacteroides xylanisolvens SD CC
1b]
gi|229445485|gb|EEO51276.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1]
gi|262353706|gb|EEZ02799.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639544|gb|EFF57837.1| PPIC-type PPIASE domain protein [Bacteroides ovatus SD CC 2a]
gi|294443062|gb|EFG11842.1| PPIC-type PPIASE domain protein [Bacteroides xylanisolvens SD CC
1b]
gi|295088067|emb|CBK69590.1| Parvulin-like peptidyl-prolyl isomerase [Bacteroides xylanisolvens
XB1A]
Length = 460
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 104/315 (33%), Gaps = 43/315 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGEL 72
VL IF V + + E I D+ + R+ AL ++ +G+
Sbjct: 8 RFVVTLVLAIFANVATYAQDNVVDEVVWVV--GDEAILKSDVEEARMDALYNGRRFDGDP 65
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAE 118
+ +E+ V+ L + + I + N + Q + ++
Sbjct: 66 YCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSREKMEEYFNKTST 125
Query: 119 DFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
L + G+ +Q L + + P V+ F + IP
Sbjct: 126 QIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIP---------- 175
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIG 232
+ ++ + P + V+K ++D + + D + L + S K + G
Sbjct: 176 -TQVEVQIITLQ-PKIPISEIEDVKKTLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGG 233
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-- 288
+ ++ + P + N+ + + ++ G I + +KR G+ ++
Sbjct: 234 ECGFMGRGMMDPAYANVAFSLQDPKKVSKIVESEFGFHIIQLIEKR---GDRVNTRHILL 290
Query: 289 SAQNTPTKIEKHEAE 303
+ + ++ + A
Sbjct: 291 RPKVSEKELTEACAR 305
>gi|295096773|emb|CBK85863.1| Parvulin-like peptidyl-prolyl isomerase [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 623
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 76/225 (33%), Gaps = 31/225 (13%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57
M + T+ + + + +++ F + + SY ++ +NG+ I+ G
Sbjct: 1 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANY-AAKVNGQEISRGQFENAF 59
Query: 58 --KRIALLKLQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+R + + L + + LI E L Q + G+ V
Sbjct: 60 AGERNRMQQQLGDQYSELAANEGYMKNLRQQTLNRLIDEALLDQYAKSLGLGISDEQVKK 119
Query: 105 FF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
N ++S +++ G+ + + Q L Q ++ +
Sbjct: 120 AIFSTQAFQSNGKFDNARYNSIVNQMGMTADQYAQALRNQLTTQQLINA-----VVGTDF 174
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ +++ + ++ ++R + N ++++ DAE
Sbjct: 175 MLKGETEELAALVAQQRVVREATIDV------NALAAKQQVSDAE 213
>gi|311070719|ref|YP_003975642.1| hypothetical protein BATR1942_18970 [Bacillus atrophaeus 1942]
gi|310871236|gb|ADP34711.1| hypothetical protein BATR1942_18970 [Bacillus atrophaeus 1942]
Length = 306
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 98/302 (32%), Gaps = 37/302 (12%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ S + S TI + +T D L+K+ E K ++++I
Sbjct: 29 IVVAYKLTKSQAAATQSQESIATIGDKSVTRED--------WLKKMEDEYGKATLEDMIN 80
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ +Q +K+ + + + F+ SF + + + +K +
Sbjct: 81 VRVVEQLAKKNKLKVSDSDIEREFLLIKAVNN-------SFYEDEHTTEKEWKDQIRYNI 133
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ +++ D + EM+ K K Y IR ++ +Q + +
Sbjct: 134 LLEELLTKD--IDISEKEMKSFYTKNKELYQFDDSYRIRHIVVK-------DQEEANRVL 184
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNLLKKSQNN--TT 258
KD + + E+ + G ++ E+ + + + + N +T
Sbjct: 185 KD---LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEAQDSIPAAYITEARTLKENEWST 241
Query: 259 NPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P KG I + +K R + +K VK L A +
Sbjct: 242 EPIKVSKGYAIIQLKEKLNARTFTYDEVKDQIKRQIAMDQLGDKAT---VKTLWKEADVS 298
Query: 316 YY 317
++
Sbjct: 299 WF 300
>gi|113868643|ref|YP_727132.1| parvulin-like peptidyl-prolyl isomerase [Ralstonia eutropha H16]
gi|113527419|emb|CAJ93764.1| Parvulin-like peptidyl-prolyl isomerase [Ralstonia eutropha H16]
Length = 250
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 82/256 (32%), Gaps = 30/256 (11%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K+ G+ E + ++++ + L ++ G+ + Q R GL A D
Sbjct: 17 FVRLLKLTGQFEGLV-EQMVRDKLTVHAAKRQGVVVTPEEIQERADQFRRVQGLHRAADM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ +LD I + F+ ++ + + + A Q + +
Sbjct: 76 NHYLDALNISLDEFEAFVTDSL---------YQERMMEQ-VCSEAAVQAYFALNSPRFDS 125
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKD----AEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
V + D++ + + + D AE +R D + G+
Sbjct: 126 IEVSHIVVDSEGKAKELISYLQDDPDAFAEMAREHSIADTRE-----------RGGEIGK 174
Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+L L + + P+ + + E + +K + + +
Sbjct: 175 VLRGSLKTDIEAKVFNAEPGDLLGPFPSADRSFFEVFLVREKHPATLDSEVAVEVRRLLR 234
Query: 294 PTKIEKHEAEYVKKLR 309
+ E+V + R
Sbjct: 235 EDWLMARAQEHVIEAR 250
>gi|296122979|ref|YP_003630757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
limnophilus DSM 3776]
gi|296015319|gb|ADG68558.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
limnophilus DSM 3776]
Length = 377
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 79/260 (30%), Gaps = 41/260 (15%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-GIGDN 132
K + ++I T+ +Q E +G+T V + A+ L ++ L + GI
Sbjct: 97 KEVLDDIINRTMIQQACEAAGVTVTEEEVTAEINRIAKRFNLDVNNWYQMLQAERGINPQ 156
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+++ + IWP + + +++ E E V P K
Sbjct: 157 QYRRSV----IWPMLALKKLASEKIDIKEE--------------ELNRAFVRNYGPRVKA 198
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP-------- 244
+ R K + F + SI L + P
Sbjct: 199 RMILMDNLRRATTV-----WEKANADADNFEKYAQEFSIDPQSRALGGSVPPIPKYSGND 253
Query: 245 -QFQNLLKKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLS----AQNTPTKI 297
+ + + V + G AI C+ R + L + + K
Sbjct: 254 SLEKAAFALKEGEISG--VIEVGPSRFAIIKCEGRTVPTVNELTQEIRDSLYDELAEQKT 311
Query: 298 EKHEAEYVKKLRSNAIIHYY 317
+ A+ ++++ + I Y
Sbjct: 312 QVSVAKTFEEIQKSTRIDNY 331
>gi|306820765|ref|ZP_07454390.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551155|gb|EFM39121.1| peptidyl-prolyl cis-trans isomerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 245
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 55/285 (19%)
Query: 38 MSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKI-AVQELIVETLKKQEIEKS 93
M ++I TI IT+ D+ K + L + +GE + +QELI + L + + S
Sbjct: 1 MENKILATIGDMNITEKDLDYMKKNMDKRVLSQFSGERGEYYLLQELINQKLMAIDAKTS 60
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ +++ + F ++ +S + LD + D +++
Sbjct: 61 DL-LNNDEFKFEFESM-KDNFISQYVIKTVLDSVTVSDEEVREFF--------------- 103
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
K +L ++ +++
Sbjct: 104 ------------ETNKNAFGESETVSASHIL------------VGDLSKAESLYEKIQNG 139
Query: 214 KDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
+D L K S + G Y + +F+++ + P TQ G I
Sbjct: 140 EDFATLAKENSTCPSSANGGDLGYFGRGQMVKEFEDMAFSLEVGAVSKPVKTQFGYHLIL 199
Query: 272 ICDKRDLGGEIAL-----KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ DK+ + K L K ++ + LR
Sbjct: 200 LNDKK---ADKPKSFEDIKDELRESLFAKKQQEAYVAKINSLREK 241
>gi|229167152|ref|ZP_04294895.1| Foldase protein prsA 1 [Bacillus cereus AH621]
gi|228616386|gb|EEK73468.1| Foldase protein prsA 1 [Bacillus cereus AH621]
Length = 283
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 95/302 (31%), Gaps = 50/302 (16%)
Query: 22 LIIFCIVPIVSYKSWA-MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
L + I+ V+ A SS T +T+ ++ L+ L ++ + +
Sbjct: 6 LFMGTIIACVALTLSACGSSENVATSKVGNVTEKEL---SKELRQTYGKSTLSQMMLNKA 62
Query: 81 IVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQY 137
+++ K +E +K V Q + F L++ G+ ++ K+
Sbjct: 63 LLDKYKVSDEEAKK--------QVEAAKEQMG-------DKFKVALEQVGLKNEDELKER 107
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + ++ + ++ K+ E + +L + +
Sbjct: 108 MKPEIALEKAIRA------TVTDKDV-------KDNHKPEMKVSHILVKDEKTAKEVKEK 154
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNN 256
+ +D + +D E+ G+ +F+ K
Sbjct: 155 INN-GEDFTALAKQYSEDTVSKEQ---------GGEIAGFAPGQTVKEFEEAAYKLDAGQ 204
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNA 312
+ P T G I + DK++L +K + +++ ++ + L A
Sbjct: 205 VSEPIKTSYGYHIIKVTDKKELKPFDEVKDTIRKDLEQQRLQDATGKWKQQVINDLLKEA 264
Query: 313 II 314
I
Sbjct: 265 DI 266
>gi|126662093|ref|ZP_01733092.1| possible peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium BAL38]
gi|126625472|gb|EAZ96161.1| possible peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium BAL38]
Length = 653
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 16/218 (7%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD-NHFKQYLAIQSIWPDVVKNDFMLKY 156
++ + L E + + G+ N K Y Q + V + +
Sbjct: 54 SQKDLDKYLDLFLG-YKLKVEKANKIGLQNGLNYQNELKSY-RNQLS-KNYVNDSKVTNE 110
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E + +E +L + + L + RL +D
Sbjct: 111 LVKEAY---------DRMQQEVRASHILVLVDEGALPQDTLKAYNKVIEIKRRLDAGEDF 161
Query: 217 NKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
+ + S+ V G Y + F+N ++ + P+ T+ G + +
Sbjct: 162 ITVAQQTSEDPSVKENNGDLGYFSAFRMVYPFENAAYNTKVGQVSKPFRTRFGYHIVKVL 221
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
DKR GE+ + + + + + +
Sbjct: 222 DKRVNRGEVTVAHIMIVKQNDAAQNEKAKTTIDDIYKK 259
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 53/150 (35%), Gaps = 8/150 (5%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
K + E + ++ ++ QN+ D +++ + L + S+ +
Sbjct: 223 KRVNRGEVTVAHIMIVKQNDAAQNEKAKTTI--DDIYKKIQQGEAFESLAQQFSEDKSSA 280
Query: 231 --IGKAQYLLESDLH-PQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G Q L +F+N+ K ++ + P+ +Q G + + +K + +K
Sbjct: 281 PKGGVLQRFGSGQLSSEEFENVAFELKEKDQISVPFQSQFGWHIVKLIEKHPVRSFDEMK 340
Query: 286 AYLSAQNTPTKIEKH-EAEYVKKLRSNAII 314
L + + KKLR I
Sbjct: 341 FELEEKIRKDERSLLITNSLAKKLRDKYTI 370
>gi|213622668|ref|ZP_03375451.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 599
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 62 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 121
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 122 GMTADQYTQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 181
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 182 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 241
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 242 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 301
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 302 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 350
>gi|322834042|ref|YP_004214069.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rahnella sp. Y9602]
gi|321169243|gb|ADW74942.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rahnella sp. Y9602]
Length = 626
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 90/314 (28%), Gaps = 84/314 (26%)
Query: 43 RTTINGEVITDGDISKRIA--LLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I + + + +LQ+ G+ L + ++ LI TL
Sbjct: 42 AAKVNGQEIGRAQLEQAVQNQRSRLQQQLGDQFSALAGSDGYMQQLRQESLSNLIDVTLL 101
Query: 87 KQEIEKSGITFDSNTV-NYFFV--QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q +K GIT + + F Q + + + G ++F Q + Q I
Sbjct: 102 DQYSKKLGITVSDQQIKDAIFATPQFQTDGRFDNAKYLQSIQGMGYTADNFAQLMKQQLI 161
Query: 144 WPDVVKN---------------------------------DFMLKYGNLEMEIPANKQKM 170
+ + K + E+ A +
Sbjct: 162 SQQLEQAYGQSDFVLPVESKSLGGLILQSRDVQTATLDTDALAAKQQVTDAELQAFYDQN 221
Query: 171 KN--ITVREYLIRTVLFSIPDNKLQNQ-----------------GFVQKRI--------- 202
KN ++ + + + + + G ++R
Sbjct: 222 KNSFLSPEQVKVSYIEMDAAAMQGKTNVTDADISAYYDQHKSEFGQPERRRYSVIVLKSQ 281
Query: 203 --KDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
DA + L+ D +L K S + G ++ P+F+N ++ +
Sbjct: 282 ADADAVAAELKKGTDFAELAKTKSTDALSARQGGDLGWMEPETTLPEFKNANLTTKGQVS 341
Query: 259 NPYVTQKGVEYIAI 272
+ G + +
Sbjct: 342 GVIKSDSGFFILRL 355
>gi|299139204|ref|ZP_07032380.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8]
gi|298598884|gb|EFI55046.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8]
Length = 262
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 24/202 (11%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAVQELI 81
+ P + R+ +NG++I D D+++ L Q A++ LI
Sbjct: 48 AVAPQMPLAQGMALDRVVAIVNGDLILDSDVNEETRLQVFQPYRNPNADTSRDRAIERLI 107
Query: 82 VETLKKQEIE-KSGITFDSNTVNYFFVQHARN-------TGLSAEDFSSFLDKQGIGDNH 133
+L Q+++ + + V +N + + ++ FL G +
Sbjct: 108 NRSLILQQLKLQPEDPITDDQVRKDLDNLRKNIPACKPYNCETPDGWNKFLATNGFTEAT 167
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEI------------PANKQKMKNITVREYLIR 181
+ ++ F L EI K ++ I+
Sbjct: 168 LISRWRSRMEVLRFIEERFRLGIKVKPEEIKSYYDKTLLPEYARQKATPPSLDSISSRIQ 227
Query: 182 TVLFSIPDNKLQNQGFVQKRIK 203
VL + L R +
Sbjct: 228 EVLLQQEVSALLGDWLKSLRAQ 249
>gi|197284031|ref|YP_002149903.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis HI4320]
gi|194681518|emb|CAR40403.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis HI4320]
Length = 625
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/349 (13%), Positives = 97/349 (27%), Gaps = 88/349 (25%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISK--RIALLKLQKINGE 71
+ +I + + SS + +NG I+ + + + +LQK G+
Sbjct: 13 FIKILLAVIILSFVLTGVGGYLFSSGVNDAAEVNGYKISRAQLEQAYQQRRAQLQKDMGD 72
Query: 72 --------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF------------ 105
+ + A+ LI + L Q ++ GI+ +
Sbjct: 73 NFASLASSDEGQKMIRQQALNVLINQALLDQFAQELGISAGDQQIRDAIFALPYFQTDGK 132
Query: 106 -----FVQHARNTGLSAEDFSSFLDKQGIGDN--------------HFKQYLAIQSIWPD 146
+V+ + A+ F+ + + I K + A +
Sbjct: 133 FDNKKYVELLTANNIDADAFAEGIRQNLINQQLRYSIQGTDFALESEVKDF-AGLMLQSR 191
Query: 147 VVKND------FMLKYGNLEMEIPA-----------------------NKQKMKNITVRE 177
V+ F+ K + E+ A ++ + NIT+ +
Sbjct: 192 NVRLASLDIQPFLEKETVSDEELKAFYDQNTSMFIAPAQVKVSYIQLEAQKDLSNITISD 251
Query: 178 ------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEE-SRLRLPKDCNKLEKFAS--KIHD 228
Y F++P K + + E L+ D L K S
Sbjct: 252 DEVKAYYDSNISEFTVPGQKKYSLLVLADETAAKEAEDALKNGADFVTLVKEKSIDTFSA 311
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
G ++ P+ N + + P G + D +
Sbjct: 312 KQDGSLGWITIGQELPELANASLTEKGQISQPVKISNGYAIFRLDDIKP 360
>gi|260654336|ref|ZP_05859826.1| peptidyl-prolyl cis-trans isomerase family protein [Jonquetella
anthropi E3_33 E1]
gi|260630969|gb|EEX49163.1| peptidyl-prolyl cis-trans isomerase family protein [Jonquetella
anthropi E3_33 E1]
Length = 318
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 180 IRTVLFSIPDNKL--QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
+L S+P + K + ++ + + + +S V G +
Sbjct: 146 ASHILISVPKGASDKEVAEAKDKAMDIIKKIKSGSLEFSKAAQDMSSCPSKVQGGDLGFF 205
Query: 238 LESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICD---KRDLGGEIALKAYLSAQN 292
+ + P F+ T+ P T G I + D + + + + S +
Sbjct: 206 SKGQMVPAFEKAAFALKPGEMTSEPVRTDFGFHIIKVTDAHPAKTMPLDDVKASIKSTLS 265
Query: 293 TPTKIEKHEAEYVKKLRSN 311
+ K+ + + +LR
Sbjct: 266 SQAKLAAFQKA-IAELRQK 283
>gi|145638176|ref|ZP_01793786.1| lipoprotein signal peptidase [Haemophilus influenzae PittII]
gi|145272505|gb|EDK12412.1| lipoprotein signal peptidase [Haemophilus influenzae PittII]
gi|309751332|gb|ADO81316.1| Putative peptidyl-prolyl cis-trans isomerase [Haemophilus
influenzae R2866]
Length = 622
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/396 (10%), Positives = 116/396 (29%), Gaps = 95/396 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRI--ALLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R A + L + V +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFMGQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLA 139
N + + + L+++ ++S L + G+ ++ F +
Sbjct: 121 AIVTDPNFQVKGKFDNSVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVP 178
Query: 140 IQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN------- 190
Q + + + A + + Y F P+
Sbjct: 179 AQVKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYID 238
Query: 191 ---------------------KLQNQGFVQKRIKDAEES----------RLRLPKDCNKL 219
+ F+ +R+ + + L+ + +
Sbjct: 239 LSADNISKNLQVTDIEIAQYYQDNKAQFMTQRLAHIQFANEQDAKMAYEELQKGANFADV 298
Query: 220 EKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
K S KI + G ++ ++L F++ Q + P + + +++
Sbjct: 299 AKTKSLDKISGENGGDLGWVNANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK 358
Query: 277 DLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
++ K+ + ++ + + + +
Sbjct: 359 AQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|239947926|ref|ZP_04699679.1| ppic-type ppiase domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922202|gb|EER22226.1| ppic-type ppiase domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 270
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 87/295 (29%), Gaps = 50/295 (16%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIA-LLKLQKING-----ELEKIAVQELI-- 81
++S ++A ++ T G + + I K L LQ + ++LI
Sbjct: 1 MLSGIAFANKDKVVATYKGGEVKESQIMKEFKPQLNLQSGETIKNFDDFPPQDQEKLIKI 60
Query: 82 --VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
L K+E+ KS IT S L+ ++ + K I D F
Sbjct: 61 YVNNLLLKEEVTKSNIT-SSKEFQEKLKN--AKNQLAQQELLANYIKSNITDKMFDDEYT 117
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
++ E + + +L ++ +
Sbjct: 118 -----------KYVSNLKGKE----------------QIKVAHILVK---SQKEANDIKT 147
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
K K ++L +K S + IG L P+F + N +
Sbjct: 148 KLSKGGNFTKLAEESSLDKA----SASNGGVIGYILLNQPGQLVPEFEKKAFALKVNEVS 203
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P T G I + +K+ + I K + +Y+ L + A
Sbjct: 204 TPVKTDFGWHIIKVLEKKPVP--IPTKEEAKITIDNILAAEVLKKYISDLEAKAD 256
>gi|16759432|ref|NP_455049.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142796|ref|NP_806138.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213160790|ref|ZP_03346500.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213425852|ref|ZP_03358602.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646001|ref|ZP_03376054.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213850134|ref|ZP_03381032.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289829271|ref|ZP_06546883.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25320965|pir||AG0558 peptidylprolyl isomerase (EC 5.2.1.8) - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501723|emb|CAD08911.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138428|gb|AAO69998.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 623
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYTQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|330996061|ref|ZP_08319955.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT
11841]
gi|329574058|gb|EGG55636.1| PPIC-type PPIASE domain protein [Paraprevotella xylaniphila YIT
11841]
Length = 479
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 23/224 (10%)
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D TV+ + N L E + LD + + FK+ + D + +
Sbjct: 56 VDKKTVDEYVDLF-VNYKLKVE---AALDARYDTLSSFKKEFR---TYRDQQIRPYFVSL 108
Query: 157 GNLEMEIPANKQKMKNITVREYLI--RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ MK + L+ ++ + + K D+ + L+
Sbjct: 109 SAEEKELRRYYDGMKASIGPDGLVHPAHIMILVAQKATPEEQAKAKERIDSIYTALQQGA 168
Query: 215 DCNKLEKFASKIHD--VSIGKAQ-YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
D L K S G + + +F+++ ++ + P+++ G +
Sbjct: 169 DFATLAKQCSADKGSAARGGDLGGWFAKGQTLKEFEDVAFSLNKGEMSKPFLSPMGYHIV 228
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ D++ + + P E+ +K+ A I
Sbjct: 229 WMKDRK--------QLEPYEELKPQLQRFLESRGLKE--RVASI 262
>gi|228921035|ref|ZP_04084370.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838581|gb|EEM83887.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 293
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 78 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 130
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ K+ E + +L K IK+ ++ +
Sbjct: 131 --TVTDKDV-------KDNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 169
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 170 DFAALAKQYSEDTGSKEQGGEISSFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 229
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 230 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|169824601|ref|YP_001692212.1| peptidil-prolyl cis-trans isomerase [Finegoldia magna ATCC 29328]
gi|167831406|dbj|BAG08322.1| peptidil-prolyl cis-trans isomerase [Finegoldia magna ATCC 29328]
Length = 250
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 44/242 (18%)
Query: 40 SRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+I +NGE I ++ + + Q N E K ELI L + +K+G+
Sbjct: 6 DKILAVVNGEEIKQSEVDNFIQALGYRGAQFNNEEGRKRLTDELINRKLLFFDAKKTGLD 65
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D V + +E+ K + I ++
Sbjct: 66 KDEIYV--------KEVKKQSEEL-------------LKDFAMANIINS--------VRV 96
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E++ K + +L +++ + +K D + ++L
Sbjct: 97 SDDELKEYYENHKDNFKVQPTFTASHILV---ESEDLAKEIKEKIDNDGDFAQL------ 147
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+++++ G + + +F+N L++ + P TQ G I I DK
Sbjct: 148 --AKEYSTCPSKEQGGDLGTFQQGQMVKEFENALIENEIGDIVGPVKTQFGYHIINIKDK 205
Query: 276 RD 277
+
Sbjct: 206 TE 207
>gi|302380403|ref|ZP_07268872.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3]
gi|303235180|ref|ZP_07321799.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4]
gi|302311807|gb|EFK93819.1| PPIC-type PPIASE domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302493667|gb|EFL53454.1| PPIC-type PPIASE domain protein [Finegoldia magna BVS033A4]
Length = 250
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 44/242 (18%)
Query: 40 SRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+I +NGE I ++ + + Q N E K ELI L + +K+G+
Sbjct: 6 DKILAVVNGEEIKQSEVDNFIQALGYRGAQFNNEEGRKRLTDELINRKLLFFDAKKTGLD 65
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D V + +E+ K + I ++
Sbjct: 66 KDEIYV--------KEVKKQSEEL-------------LKDFAMANIINS--------VRV 96
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E++ K + +L +++ + +K D + ++L
Sbjct: 97 SDDELKEYYESHKDNFKVQPTFTASHILV---ESEDLAKEIKEKIDNDGDFAQL------ 147
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK 275
+++++ G + + +F+N L++ + P TQ G I I DK
Sbjct: 148 --AKEYSTCPSKEQGGDLGTFQQGQMVKEFENALIENEIGDIVGPVKTQFGYHIINIKDK 205
Query: 276 RD 277
+
Sbjct: 206 TE 207
>gi|298480175|ref|ZP_06998373.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
D22]
gi|298273456|gb|EFI15019.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides sp.
D22]
Length = 460
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 104/315 (33%), Gaps = 43/315 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGEL 72
VL IF V + + E I D+ + R+ AL ++ +G+
Sbjct: 8 RFVVTLVLAIFANVATYAQDNVVDEVVWVV--GDEAILKSDVEEARMDALYNGRRFDGDP 65
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAE 118
+ +E+ V+ L + + I + N + Q + ++
Sbjct: 66 YCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSREKMEEYFNKTST 125
Query: 119 DFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
L + G+ +Q L + + P V+ F + IP
Sbjct: 126 QIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIP---------- 175
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIG 232
+ ++ + P + V+K ++D + + D + L + S K + G
Sbjct: 176 -TQVEVQIITLQ-PKIPISEIEDVKKTLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGG 233
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-- 288
+ ++ + P + N+ + + ++ G I + +KR G+ ++
Sbjct: 234 ECGFMGRGMMDPAYANVAFSLQDPKKVSKIVESEFGFHIIQLIEKR---GDRVNTRHILL 290
Query: 289 SAQNTPTKIEKHEAE 303
+ + ++ + A
Sbjct: 291 RPKVSEKELTEACAR 305
>gi|222053408|ref|YP_002535770.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
gi|221562697|gb|ACM18669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter sp.
FRC-32]
Length = 296
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 8/190 (4%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVRE-YLIRTVLFSIPDNKLQ 193
Y+ Q + + ++ + E+ Q+ K+ V E +R + F+ +
Sbjct: 96 SYIIDQFLGQEYLRKVVTANVEVPDAELKKYYQEHEKDFVVPERVKVRHIYFAAAKDATA 155
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLE--SDLHPQFQNL 249
+ + +L+ D KL S+ + G YL ++ +
Sbjct: 156 EVKAQARAKAEKIAEQLKKGGDFAKLAGENSEDTESAANGGDLGYLTPGKTNSEEFEKAA 215
Query: 250 LKKSQNNTTNPYVTQKGVEYIAI--CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ T G I + ++ K Y+S+ EK E++
Sbjct: 216 FSLKAGEVSPVVETPFGYHIIKVDERQEKRTATFEETKDYISSTLKAQLEEKKAREFLDA 275
Query: 308 LRSNAIIHYY 317
+ + +
Sbjct: 276 VAKEGGLQVF 285
>gi|261886000|ref|ZP_06010039.1| foldase protein PrsA [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 268
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 96/289 (33%), Gaps = 59/289 (20%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIV 82
I+ + + ++++ + T+NG+ ITD D++ + + + +++K + +I
Sbjct: 4 GVILALSLAAAVSLNAAVLATVNGQNITDEDLAPVLGPHGSETSNVPADMKKNLLDRVIE 63
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L + +K GI D +F + +AI
Sbjct: 64 RKLMLDQAKKDGIEKDD-------------------EFKKV-------VKELEDNVAINI 97
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
W ++ + A K K Y F +P V+
Sbjct: 98 -W--------------MKKQFDAIKVDEKKAKDF-YEQNKDKFVVPAQAKAKHILVETEK 141
Query: 203 KDAEESRLRLPKDCNKLEKFASKI---------HDVSIGKAQYLLESDLHPQF-QNLLKK 252
+ A+ + L+K S+I V+ G+ + ES + F +
Sbjct: 142 EAADIIKSLNGLKGAALDKKFSEIAKEKSIDKSSAVNGGELGWFGESQMVASFSKAAFGL 201
Query: 253 SQNNTTN-PYVTQKGVEYI---AICDKRDLGGEIALKAYLSAQNTPTKI 297
+ TN P ++ G I + DK +G + A KA + Q +
Sbjct: 202 KKGEITNKPVKSEFGYHVILKEDMKDKSAVGFDKA-KANIENQMKSEEF 249
>gi|297539447|ref|YP_003675216.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylotenera sp.
301]
gi|297258794|gb|ADI30639.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylotenera sp.
301]
Length = 316
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 94/312 (30%), Gaps = 54/312 (17%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--LQKINGE 71
K+L V+I + +S+I +NG IT I + + + E
Sbjct: 3 KILKLSLVVIFCNLAACGKGSEKVANSQIAAKVNGVEITTHQIDSVMKSAQNVTAENVSE 62
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSN---TVNYFFVQHARNTGLSAEDFSSFLD-KQ 127
K A+ +LI + L + K + + + + L L
Sbjct: 63 FRKKALDKLIDQQLVLDKASKESLDRTPDVILEIEAAKKEILARAYLK-----KMLANSS 117
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
I D+ F++Y E + ++++
Sbjct: 118 EINDSEFRKYY----------------------------------DEHTELFSKRRIYNL 143
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
D Q+ + +K+ ++ + L+ K S + L D+ P+ Q
Sbjct: 144 QDISTQSNEQTLELLKENVNAQKSMMDIAESLKAKGIKFSSGSFTRPAEQLPLDILPKMQ 203
Query: 248 NLLKKSQNNTTNPYVTQKG--VEYIAICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEY 304
L + +V Q G I + + + + T+ ++ +
Sbjct: 204 MLKD---GDM---FVWQSGDIAHAIKLTSIEESPVGLTEATPMIKNYFINTRGKQIVEDK 257
Query: 305 VKKLRSNAIIHY 316
+KK R A I Y
Sbjct: 258 IKKFRQEAKIEY 269
>gi|259047483|ref|ZP_05737884.1| foldase protein PrsA [Granulicatella adiacens ATCC 49175]
gi|259035674|gb|EEW36929.1| foldase protein PrsA [Granulicatella adiacens ATCC 49175]
Length = 315
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 100/287 (34%), Gaps = 26/287 (9%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+L++ + + + + S I TT G V + ++ + Q + + ++
Sbjct: 8 MLVLASTLALAACSNNTNSETIATTKYGNVTREEFVNAMKDTVGEQTLQRLVLTKVLEGS 67
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLA 139
+ ++ K +E + V Q+ G+ + L + GI + ++Q +
Sbjct: 68 VEDSKKLKEDAE-------QEVAKLVAQYGGENGM-----LAALKQSGIASVDAYRQTIY 115
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++ + +I K + + ++ +L + +
Sbjct: 116 L----NKLMTAAVKKAAAFTDEDIK----KYYDEWEPQIKVQHILIAAKATASDEEKAAA 167
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL---LKKSQ 254
K + +L+ D ++L K S + G+ SD+ +F LK
Sbjct: 168 KAKAEELIQKLKDGADFSELAKENSADTGTASKGGEIGPFKRSDMVKEFSEASYNLKNVG 227
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ T P TQ G I + DK + +K+ + + K++
Sbjct: 228 DITETPVETQFGYHIIKMLDKGEKKPFDEVKSQMEDEMLQAKLKDSA 274
>gi|326563012|gb|EGE13287.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 46P47B1]
Length = 367
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+R +L + P + + + ++K+ + +S R ++++ G+
Sbjct: 210 TLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFARRYSACPSKDDGGEL 269
Query: 235 QYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQ 291
L + P+F++ + + NP T+ G+ I + K++ +AY +
Sbjct: 270 GVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENH 329
Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314
+Y+ +L A I
Sbjct: 330 LKQQSFHHSLCDYLFELSQKADI 352
>gi|324999487|ref|ZP_08120599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudonocardia sp.
P1]
Length = 353
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 67/241 (27%), Gaps = 22/241 (9%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ +Q + + V + DF L G+ + L Q +
Sbjct: 109 VVEQAAAEQNVVGPETEVQDALARIVEREFPGGRADFVRALGNLGVSEPDLTAELHRQLV 168
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + + ++ + R +P+ + V R
Sbjct: 169 TSRLFEQVTAGVPPVTDQDVRTA-----------FDERRDQMQVPEQRELRNIVVDSR-D 216
Query: 204 DAEESRLRLPKDCNKLE-KFASKIHDVS---IGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
A++ R RL + A + + + G L + L F + +
Sbjct: 217 KADDLRRRLDDGADFATLARADSMDESTKQAGGALGKLPATALDQPFADAAFTTPSGGLF 276
Query: 259 NPYVTQKGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P T+ G + L E + L A T + E++ + +A I
Sbjct: 277 GPVQTRFGWNLGQVAGITPAVPLTFEQVAE-NLRATLTDERAGDAWREWLGERIRDARID 335
Query: 316 Y 316
Y
Sbjct: 336 Y 336
>gi|313672612|ref|YP_004050723.1| ppic-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939368|gb|ADR18560.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 313
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/264 (11%), Positives = 87/264 (32%), Gaps = 19/264 (7%)
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN----YFFVQHARNTGLSAED 119
+ N +++ ++++ + + ++ + + +D
Sbjct: 52 RTIDQNNPKVAEVKNDIVKNLVQREILLTLAMKSIPKDIDKKTSESYENLKKKYK-DPKD 110
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI----PANKQKMKNITV 175
F + + G + K+ + I + V + E E NK K+ +
Sbjct: 111 FENAMKSAGTNEKEVKEKIKKNLILENYVNS-IAKDIKITEQEKKDFYEKNKDIFKDPEM 169
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKA 234
+L + D + K D+ L+ K + +K++ + G
Sbjct: 170 --VKASHILIKVDDKQNDKDA---KSKIDSIYKELKSGKSFEELAKKYSQDGSAANGGDL 224
Query: 235 QYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQ 291
+ + +F+N+ + + P+ TQ G + + +KR + ++ +
Sbjct: 225 GFFPRGAMVKEFENVAFSTPAGKFSEPFKTQYGYHIVKVTEKRPAKTYTYEEVSNHIEGK 284
Query: 292 NTPTKIEKHEAEYVKKLRSNAIIH 315
K++ + V++ + + +
Sbjct: 285 LRMDKLKGILDKKVEEGKKSVKVE 308
>gi|90420209|ref|ZP_01228117.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335543|gb|EAS49293.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans
SI85-9A1]
Length = 320
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 83/284 (29%), Gaps = 55/284 (19%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIA-V 77
+L + + A + + E IT+ D+ A + Q ++ + K+A +
Sbjct: 35 LLAGALVFAAFGTAAHAADEDVVARVGSEEITERDLKAAAAEVGEQFARLPADQRKLAVL 94
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
LI + ++ E + D V +
Sbjct: 95 SALIDIKVLARQAEAEALQ-DDPEVAAQI-----------------------------DF 124
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
L +++ + + E++ K+ E R +L +
Sbjct: 125 LRERTLHNAYFARNGVANITEEELKARFEKEVAAMPATEEVHARHILLKTKEE------- 177
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
+A ++L D +L K +S G + + P+F+ +
Sbjct: 178 -----AEAVIAKLDGGADFVELAKESSTGPSGPEGGDLGFFSAGQMVPEFEKVAFTMEPG 232
Query: 256 NTTN-PYVTQKGVEYIAICDKR-------DLGGEIALKAYLSAQ 291
T P TQ G I + +KR D + + L +
Sbjct: 233 TYTKEPVQTQFGWHVIKVEEKREAPKPEFDAVKDQVRQVVLREK 276
>gi|269792688|ref|YP_003317592.1| hypothetical protein Taci_1078 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100323|gb|ACZ19310.1| hypothetical protein Taci_1078 [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 340
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 86/291 (29%), Gaps = 35/291 (12%)
Query: 43 RTTINGEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVETLK----KQEIEKSGI 95
++G+ I + R+ + Q ++ + + ++ + + + + GI
Sbjct: 45 VAKLDGKKIMRSQVEMRLREVAEQFGDRVTSGDVPMIRRMILDDIVVGMELTKAAKAEGI 104
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
V+ + + E + +L + G+ + ++ + +++
Sbjct: 105 KVAKEEVDQYLASMQAQFP-TKEAYDEYLKRSGMTERELRRKVEENIAVGKLME-KVTAS 162
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E+ K+ F P+ N V R K+A R R
Sbjct: 163 ASVDAGEVRKFYDATKDA----------FFKRPEGYTVN--VVAFRGKEA-AQRGRTRLL 209
Query: 216 CNKLEKFASKIHDVSIGK------AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269
+ +G ++ + DL ++++ + +N
Sbjct: 210 KGEAWDSVMGAMSGDLGNFTPYDKPIFVSKKDLADDLKSVISLKVGSYSNLVKVGSDDYL 269
Query: 270 IAICDKRDLGGEIAL-----KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + KR E + K + K + + YV L A +
Sbjct: 270 MVL--KRSNEKERVMAFDEVKEQIEGVLLDQKRGQMQRAYVADLLKKAPLE 318
>gi|90407416|ref|ZP_01215600.1| putative peptidyl-prolyl cis-trans isomerase D [Psychromonas sp.
CNPT3]
gi|90311447|gb|EAS39548.1| putative peptidyl-prolyl cis-trans isomerase D [Psychromonas sp.
CNPT3]
Length = 635
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 24/192 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ + +++ F + + Y +S + T+NG+ I++ + +
Sbjct: 1 MLDKMREGSQGIAAKIILIVIILSFALAGVSGYLGGGNAS-VAITVNGDEISNASVEQEY 59
Query: 61 A--LLKLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+LQ+ GE + A Q LI L Q I + V
Sbjct: 60 KNERSRLQQQYGEQFDIIAASPGFVKQVRAQAKQTLISNLLIAQSIADMDLRIGDEQVKD 119
Query: 105 F---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYG 157
+ + E + S L + F Q + + +V ++F+L
Sbjct: 120 AIRKMPEFQVKGEFNNEQYLSTLRRASYTPAKFSQSIKQDLVRRQLLNTLVSSEFILPIE 179
Query: 158 NLEMEIPANKQK 169
++ +Q+
Sbjct: 180 IDNVDKLQAQQR 191
>gi|238919016|ref|YP_002932530.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Edwardsiella
ictaluri 93-146]
gi|238868584|gb|ACR68295.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 626
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 51/161 (31%), Gaps = 25/161 (15%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQ 66
L + L+ FVL I +A ++G+ I + + + +LQ
Sbjct: 14 LKVILALIIISFVLTGVGNYLIGGSGDYA------AKVDGQEIGRAQLEQAVQNERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ G+ L K + +I + L Q +K + V
Sbjct: 68 QQLGDQFSVLAGNEGYMKELRKQVLSRMIDDVLLDQYAKKLNLAISDAQVKEAIRAMPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + G+ + + Q + Q + +++
Sbjct: 128 QSDNHFDNAKYLDMVARLGLSPDTYAQLVRQQLVTQQLIQG 168
>gi|1480131|emb|CAA68024.1| nifM [Pantoea agglomerans]
Length = 264
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 80/238 (33%), Gaps = 22/238 (9%)
Query: 77 VQELIVETLKKQEIE-KSGITFDSNTVN-YFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
Q++I E + + +E I S V L+A + L Q +
Sbjct: 40 RQQVIEEAVAQAALEHALNIEPQSVEVTRQALAAELPELELTATETEELLLHQTL----- 94
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
L Q W + + ++E + + R +L ++ N +
Sbjct: 95 ---LREQLNWVQ----QQAPQPDDAQVEAWYRGHAQHFVRPEQRYTRHLLLTVEGN---S 144
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKS 253
++ A R + +++ + G ++ L+PQ ++ L +
Sbjct: 145 PAVREQIDAIARRLRDGHALFARQALRYSHCPSAMGGGVLGWVGRGILYPQLEDTLFRLE 204
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL---SAQNTPTKIEKHEAEYVKKL 308
++P T+ G + +C++ L + L Q + ++ +++++L
Sbjct: 205 AGQLSSPVETELGWHLL-LCEQIRLPQPLPKAEALTRVRQQLIARQQNHYQRQWLQQL 261
>gi|227484925|ref|ZP_03915241.1| possible peptidylprolyl isomerase [Anaerococcus lactolyticus ATCC
51172]
gi|227237080|gb|EEI87095.1| possible peptidylprolyl isomerase [Anaerococcus lactolyticus ATCC
51172]
Length = 248
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275
+K++ S G + + +FQ+ L + + P +Q G I + D
Sbjct: 144 EAAKKYSKDPSAASGGSLGTFPKGVMVKEFQDGLDSLEIGEISKPVKSQFGYHIIKLEDI 203
Query: 276 R---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII-HYY 317
+ + + + EK+ + +K++ NA + YY
Sbjct: 204 QNEEPKAFDEVKEQVYQTYLMVKRQEKYLEK-LKEISKNAEVKKYY 248
>gi|113461230|ref|YP_719299.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus somnus 129PT]
gi|112823273|gb|ABI25362.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus somnus 129PT]
Length = 618
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/356 (9%), Positives = 97/356 (27%), Gaps = 81/356 (22%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59
+ K+ + S + + + + F + + Y + + +NGE I+ ++
Sbjct: 2 LMEKLNNASSGIVSKIIFGLIGVSFVLSGVAGYMFIRTDTSV-AKVNGEEISQQVFLQQY 60
Query: 60 ------------IALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
++ + L + LI + L +Q ++ + V+
Sbjct: 61 NNEYQRLSENLGAKFAEVADSAAKHLRHEVLDRLINQELLRQYAQELKLGISDKQVSLAI 120
Query: 107 VQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------- 150
V + + L GI + + Y+ + + +
Sbjct: 121 VNSPMFQNEGKFDNKIYQQILASSGISSDTYAAYVREGLVLEQLQQGIANSDFQVPIQLN 180
Query: 151 --------DFMLKYGNLEMEIPANKQKMKNITVRE-YLIRTVLFSIPDNK-----LQNQG 196
++ L ++ KQ + + + Y F++P+ +
Sbjct: 181 ELAKNFFQRRDVRLAVLSLDDEMQKQTVTEQEIEQYYQANKANFAVPERVKVQYLDLTRA 240
Query: 197 FVQKRIKDAEESRLRLPK---------------------------------DCNKLEKFA 223
+++K ++ + + D L K
Sbjct: 241 IADQKVKISDIEIAQYYQDNKAQYITKHLAHIQLPTEQEAQSVYANLQNGEDFAALAKLY 300
Query: 224 S--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
S + G +++ + F++ + + P I + D +
Sbjct: 301 SMDTLSAPKGGDLDWVVNGMMPLAFESAVTLLNVGEYSQPVKVDNAYHIIKVLDMK 356
>gi|296273396|ref|YP_003656027.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter
nitrofigilis DSM 7299]
gi|296097570|gb|ADG93520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter
nitrofigilis DSM 7299]
Length = 297
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 115/313 (36%), Gaps = 37/313 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+++ + +VS S +S I +NG +T +++ L ++K + +LI
Sbjct: 4 LVYTLSIVVSLFSSTYASDILAVVNGGNVT-SEVAPN-NFKTLDNQ---IQKNILNKLIE 58
Query: 83 ETLKKQEIEKSGITFDSN--TVNYFFVQHARN--TGLSAEDFSSFLDKQGIGDNHFKQYL 138
+ L K+ I V ++ + E+ + + ++ I K Y
Sbjct: 59 KRLVSDYALKTDIVKSEEYKKVLKHILKMSDENDNKEGNENLADIVKQKSI-----KGYT 113
Query: 139 AIQSIWPD--------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
Q + + L + E+E N ++ K T + + +++
Sbjct: 114 QEQLNSKKGLLAFDFLLTQKAEQLLPSDKELEKYYNDRRYKYDTPAQIELLSIVV----- 168
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ ++ IK + ++ L + +K++ + G + S L+ + +L
Sbjct: 169 --EKLSLAKEIIKKLQNAKDILQEFSILAKKYSLAPTAKNSGYFGKIPLSVLNSELSPIL 226
Query: 251 -KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY---- 304
K + TN P T+ G E I + D+ + + + ++K +
Sbjct: 227 KDKKRGFFTNKPIKTEFGYEIFYILN--DIPEYNSTFEGVKDKVKEEYVKKTVKTWAINK 284
Query: 305 VKKLRSNAIIHYY 317
+K+L+ A+I Y
Sbjct: 285 IKELKEKAVIKIY 297
>gi|302873039|ref|YP_003841672.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
gi|307688832|ref|ZP_07631278.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
gi|302575896|gb|ADL49908.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulovorans 743B]
Length = 247
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 74/234 (31%), Gaps = 13/234 (5%)
Query: 96 TFDSNTVNYFFVQHARNTGL--SAEDFSSFLDKQGIGDNHFKQY---LAIQSI---WPDV 147
+N V+ + E + L ++ + F Y L + +
Sbjct: 13 EITEQNINELIVRMPDQQRMYYDTEQGRARLLEELVSVEVFYNYALELKLDESPAFLEQL 72
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV--QKRIKDA 205
+ + E+ + + Y LF P+ + V +++ ++
Sbjct: 73 EGAKRQMLFPIAADEVTKDVEIADQDVADFYKNNRELFKKPELATASHILVDSEEKAQEI 132
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264
+ + K+++ + G + + P+F+ + N ++P TQ
Sbjct: 133 KAEIEAGLSFADAAAKYSTCPSNQRGGDLGQFQKGQMVPEFEEVAFTLPINKLSDPVKTQ 192
Query: 265 KGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G I + D + + ++ + + + + E V +L+ + Y
Sbjct: 193 FGYHLIKVTDFQPEMIQDFDEVQVAIKEKMLQDRRQYKFLEKVDELKKLYNVEY 246
>gi|228942849|ref|ZP_04105367.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228816835|gb|EEM62942.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 284
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 34/225 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG-IGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + + G ++F ++L + G + K + Q + VK
Sbjct: 72 KVTDDEAKKKVEELKKQMG---DNFKAYLTQAGAKDEEDLKTKIKTQIAFEKAVKA---- 124
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ K+ + +L K IK+ +L +
Sbjct: 125 --SVTEKEM-------KDYYKPKLKASHILVK--------DEKTAKEIKE----KLNNGE 163
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ ++ +F+ K ++P + G I
Sbjct: 164 DFAALAKQYSEDPGSKEKGGELPEFGPGEMDSKFEEAAYKLEAGQVSDPIKSSHGYHIIK 223
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAII 314
+ +K++L K + + + ++ + ++ K L A I
Sbjct: 224 LTEKKELKPFDQEKDNIRKELEQKRSQDQQWQQQFFKDLFKKADI 268
>gi|110679691|ref|YP_682698.1| peptidyl-prolyl cis-trans isomerase, putative [Roseobacter
denitrificans OCh 114]
gi|109455807|gb|ABG32012.1| peptidyl-prolyl cis-trans isomerase, putative [Roseobacter
denitrificans OCh 114]
Length = 276
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 84/277 (30%), Gaps = 34/277 (12%)
Query: 44 TTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NGE + I+ + G + A + V TL QE K G+ V
Sbjct: 8 LVVNGETVPSARIAAETQNHDGPKGKPGIAWRKAANAMAVRTLLLQEARKRGV---QAQV 64
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
I + F+ + + + + +
Sbjct: 65 QE------------------------IAPSRFETEEEA-LVRGLLDEAVVVSAPSAASVR 99
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEK 221
K ++ T + + +L + + + R D L P K +
Sbjct: 100 AEWEKDPLRFRTPPLWEVSHILVACDPRDEEARRQAHARAVDLTGQALGNPNGFAKLAAR 159
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAI--CDKRD 277
+ + G D P+F+ L++ ++ T P +T+ G I +
Sbjct: 160 ESDCGSKSTGGALGQQSPGDTVPEFEAALRQLTEGGITGEPILTRYGWHIIKLDAVAIGA 219
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ A+K +S + ++V+ L ++A I
Sbjct: 220 VLPFDAVKQKISDAMEKASWARAAKDFVQTLVASAEI 256
>gi|264679103|ref|YP_003279010.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
gi|262209616|gb|ACY33714.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
Length = 263
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 103/281 (36%), Gaps = 54/281 (19%)
Query: 43 RTTINGEVITDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+NG+ + R+ LK Q + +G+ ++++I + + +EI
Sbjct: 29 VAIVNGKAVP----MARVNALKTQIEASGQPVVPEMEKMIKDEVIAREI----------- 73
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY--LAIQSIWPDVVKNDFMLKYGNL 159
F+Q A GL+ G +KQ +A Q++ + +DF K
Sbjct: 74 ----FMQEANRRGLA-------------GSEAYKQQMEMARQTVLIRALFDDFRKKNPVT 116
Query: 160 EMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+ E A K + +EY +L D A + ++ K
Sbjct: 117 DAEAKAEYDKFVAANGGKEYKASHILVESED------------RAKAIIAEVKAGKKFED 164
Query: 219 LEKFASKI--HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICD 274
+ K SK G + ++ P+F + L+K + T P +Q G I + D
Sbjct: 165 IAKKESKDPGSGARGGDLDWANPNNYVPEFTEALIKLKKGEMTDAPVKSQFGWHIIRMDD 224
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+R E+ + Q T ++ E ++ +LR +A I
Sbjct: 225 ERQ--AEMPKFEDVKPQITQQLQQQKEQQFQDQLRKSAKIQ 263
>gi|168188090|ref|ZP_02622725.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum C str.
Eklund]
gi|169294073|gb|EDS76206.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum C str.
Eklund]
Length = 247
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 19/238 (7%)
Query: 94 GITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
G N + + + L+ E L +Q I F Y + + +
Sbjct: 11 GKQITENDIQAAIKRFPQEQQAYLATEQGKKQLLEQLISFEVFYDY-GKEMEYDK--TKE 67
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVL---------FSIPDNKLQNQGFV--QK 200
+ +E + K I+ E + V F + + V ++
Sbjct: 68 YTTAIEIMERDALTQLSVNKVISQVELTDKEVEDYYNANKDNFVVGEMISAKHILVDTEE 127
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN 259
K+ E + K+++ G + + P+F+ +
Sbjct: 128 LAKEVTEEIKNGMTFSDAATKYSTCPSKAQGGNLGKFGKGQMVPEFEEAAFNLEIGKISE 187
Query: 260 PYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
P TQ G I + DK++ + ++ + + + A V++L+ +
Sbjct: 188 PVKTQFGYHLIEVEDKQEATKKSFDEVRDLIRTNLLQERQKVKYATTVEELKKKYNVE 245
>gi|206971674|ref|ZP_03232624.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH1134]
gi|206733659|gb|EDZ50831.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH1134]
Length = 283
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 71/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ ++ K+ E + +L K IK+ ++ +
Sbjct: 121 --TVTDKDV-------KDNYKPEMKVSHILVK--------DEKTAKEIKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ DK++L +K + +++ ++ V L +A I
Sbjct: 220 VTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVNDLLKDADI 266
>gi|228976219|ref|ZP_04136699.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228783511|gb|EEM31610.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 279
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 34/225 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG-IGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + + G ++F ++L + G + K + Q + VK
Sbjct: 67 KVTDDEAKKKVEELKKQMG---DNFKAYLTQAGAKDEEDLKTKIKTQIAFEKAVKA---- 119
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ K+ + +L K IK+ +L +
Sbjct: 120 --SVTEKEM-------KDYYKPKLKASHILVK--------DEKTAKEIKE----KLNNGE 158
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ ++ +F+ K ++P + G I
Sbjct: 159 DFAALAKQYSEDPGSKEKGGELPEFGPGEMDSKFEEAAYKLEAGQVSDPIKSSHGYHIIK 218
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTK--IEKHEAEYVKKLRSNAII 314
+ +K++L K + + + ++ + ++ K L A I
Sbjct: 219 LTEKKELKPFDQEKDNIRKELEQKRSQDQQWQQQFFKDLFKKADI 263
>gi|320101858|ref|YP_004177449.1| hypothetical protein Isop_0305 [Isosphaera pallida ATCC 43644]
gi|319749140|gb|ADV60900.1| hypothetical protein Isop_0305 [Isosphaera pallida ATCC 43644]
Length = 449
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 94/293 (32%), Gaps = 17/293 (5%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
S ING+VIT +++ + G ++ LI L Q I+
Sbjct: 67 PVAIPVNPSDPVAVINGQVIT-----RQMLSDECVARRGV---EILETLIARVLIDQAIQ 118
Query: 92 KSGITFDSNTVNYFFVQHARNT-GLSAEDFSSFLDKQ-GIGDNHF-KQYLAIQSIWPDVV 148
G++ + +N A+ GLS E + L K+ GI + + + +
Sbjct: 119 AQGLSVTAEEINAEIDSVAQRMAGLSREAWLKTLYKERGISPEQYARDIIYPTLALRKLA 178
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + +L++ A + V I N G +K +
Sbjct: 179 EPLVQITPKDLQIAFDATYGDKLRCRMIMVDKLRVAQEIWQELKANPGGFEKIAMERSMD 238
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNP-YVTQKG 266
E + ++ A + D +P ++ K + + T P V++
Sbjct: 239 LNTRSLGGLIAEPISRHAAPETVSAAAFAQLVDGNPNDKDPSHKPKDGDITGPIQVSETS 298
Query: 267 VEYIA----ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ I + + A+ A L TKI++ E L A I
Sbjct: 299 WIILKREAVIPAQAKDPNDPAIAAQLEELVRDTKIKEKMGEVFNALMKRAQIE 351
>gi|260591263|ref|ZP_05856721.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella
veroralis F0319]
gi|260537128|gb|EEX19745.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella
veroralis F0319]
Length = 478
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 82/258 (31%), Gaps = 28/258 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELIVETLKKQEIEKS 93
+ + E I ++ ++KLQ +G+ E + +++ V+ L +
Sbjct: 52 DEVIWVVGDEPILKSEVE----IMKLQGEAEGMKWDGDPECVLPEQIAVQKLFLHQAALD 107
Query: 94 GITFDSNTVNYFFVQHARNTG--LSAEDF--SSFLDK-QGIGDNHFKQYLAIQSIWPDVV 148
+ + + Q +S L++ Q +Q L +V
Sbjct: 108 SVEVTESEIAQGVDQ---QINYWISLPQIGSKEKLEEFQHKSIAQLRQDLHDDYKNRQLV 164
Query: 149 K---NDFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPDNKLQNQGFVQKRI 202
+ + E+ +K+ ++ +L P + + ++ ++
Sbjct: 165 QKMQAKLVGDVKVSPAEVREYFRKLPVDSIPMIPTTVEVEILTQTPKVEPEEVNRIKNQL 224
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTT 258
+D + + L + S+ S G+ Y+ L P F + +
Sbjct: 225 RDYTDRVTKGETSFATLARLYSEDPGSSRQGGELGYMGRGMLDPAFAAVAFNLTDPKKVS 284
Query: 259 NPYVTQKGVEYIAICDKR 276
++ G I + D+R
Sbjct: 285 KIVESEFGYHIIQLIDRR 302
>gi|260912811|ref|ZP_05919297.1| peptidyl-prolyl cis-trans isomerase D [Pasteurella dagmatis ATCC
43325]
gi|260633189|gb|EEX51354.1| peptidyl-prolyl cis-trans isomerase D [Pasteurella dagmatis ATCC
43325]
Length = 625
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 52/396 (13%), Positives = 111/396 (28%), Gaps = 98/396 (24%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59
+ K+ + + ++ L + + F + I Y + +NGE IT +R
Sbjct: 2 LIEKLHSITNSWVSKLVLGLIAVAFVLSGITGY-VFTNVDTSVAKVNGEEITQQAFHQRY 60
Query: 60 -IALLKLQKING--------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
+L + G L + + L+ + L +Q + +
Sbjct: 61 ESEFERLNQQLGSQFAAVAGSKGFVSNLRQSVLNSLVNQELLRQYANDLKLAVSDERIKQ 120
Query: 103 ---------------NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHF----- 134
N + + + G++A+ +++++ + G+ ++ F
Sbjct: 121 EIVTSELFQTDGKFDNNLYQRRLQLNGMNADMYAAYVGEALRLDQLQSGLAESAFSVPAQ 180
Query: 135 ---------------------KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ----- 168
K +A Q + + +K + + A Q
Sbjct: 181 QDQLTELFFQTRKLRLAKFDLKDEIAQQQVTEEEIKAYYDANKSAFSVPELAKVQYIELT 240
Query: 169 ---KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE----ESRLRLPKDCNKLEK 221
KNI V + I DNK Q+RI E + +
Sbjct: 241 RADVEKNIQVTDVEIAQYY---QDNKALYVSQGQQRISHIELATEQDAQEVYAALQDGAN 297
Query: 222 FAS--------KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
FA KI + G +L L F++ + + P I +
Sbjct: 298 FAGLASARSLDKISAANGGDLSWLSAGGLPKAFEDAANALEVGKFSQPVKVDSHYHIILV 357
Query: 273 CDKRDLGG------EIALKAYLSAQNTPTKIEKHEA 302
D++ + + + + E
Sbjct: 358 TDRKSAEALPLSVVKTQIADQIRQNLVNNQYFSVEK 393
>gi|302345883|ref|YP_003814236.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC
25845]
gi|302149858|gb|ADK96120.1| PPIC-type PPIASE domain protein [Prevotella melaninogenica ATCC
25845]
Length = 480
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 82/258 (31%), Gaps = 28/258 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKS 93
+ + E I ++ +++LQ K NG+ E I +++ V+ L +
Sbjct: 54 DEVIWVVGDEPILKSEVE----IMRLQSEAEGMKWNGDPECILPEQIAVQKLFLHQAALD 109
Query: 94 GITFDSNTVNYFFV----------QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ + + Q L A S + + +K L +Q +
Sbjct: 110 SVEVSESEIARGIDDQINYWISLPQIGSKEKLEAFQNKSMTQIRQDLHDDYKNRLLVQKV 169
Query: 144 WPDVVKNDFMLKYGNLEM-EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
++V + E+ E + + +L P + + ++ ++
Sbjct: 170 QQNLVN---DVAVSPAEVREYFKKLPVDSIPMIPTTVEVEILTQTPKIETEEINRIKNQL 226
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTT 258
+D + + L + S+ + G+ Y+ L P F +
Sbjct: 227 RDYTDRVTKGETSFATLARLYSEDPGSARQGGELGYMGRGVLDPAFAAAAFNLTDPKKIS 286
Query: 259 NPYVTQKGVEYIAICDKR 276
++ G I + D+R
Sbjct: 287 KVVESEFGYHIIQLIDRR 304
>gi|321313742|ref|YP_004206029.1| hypothetical protein BSn5_11930 [Bacillus subtilis BSn5]
gi|320020016|gb|ADV95002.1| hypothetical protein BSn5_11930 [Bacillus subtilis BSn5]
Length = 297
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 108/318 (33%), Gaps = 40/318 (12%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQ 66
S I + +L+ V KS A +S TI G+ +T + L+
Sbjct: 3 SRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREE--------WLK 54
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + K ++++I + +Q +K+ + + V+ F+ SF +
Sbjct: 55 EMEDQYGKSTLEDMINVRVVEQLAKKNNLKISKSEVDREFLLIKAVNN-------SFYED 107
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + +K + + +++ D + N E+E +K K Y IR ++
Sbjct: 108 EHTTEKEWKDQIRYNILLEELLTRD--IDISNKELESFYHKNKELYQFDDSYRIRHIVVK 165
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHP 244
++ ++ +K+ + + E+ + G ++ E+ +
Sbjct: 166 -------DEEEAREVLKE---LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPS 215
Query: 245 QFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEK 299
+ K ++ + P G I + +K R + +K
Sbjct: 216 AYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDK 275
Query: 300 HEAEYVKKLRSNAIIHYY 317
VK L A + ++
Sbjct: 276 AT---VKTLWKEADVSWF 290
>gi|320103204|ref|YP_004178795.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida
ATCC 43644]
gi|319750486|gb|ADV62246.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Isosphaera pallida
ATCC 43644]
Length = 436
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 105/307 (34%), Gaps = 40/307 (13%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING------------ELEKIAVQELIVETLKK 87
S + + VIT G++ I + + NG ++EK+ + E I L
Sbjct: 116 STLAARVGDAVITRGELDHEID--RFAQQNGVSLATLTPEERLQVEKMVLNERIDRELIL 173
Query: 88 QEIEKSGITFDSNTVNYFFVQ----------HARNTGL-SAEDFSSFLDKQGIGDNHFKQ 136
QE + T + F R G+ + + ++ +QG + +
Sbjct: 174 QEARRVLKTPEQWAKISEFANQRWEAEEAPSLLREAGVETLVELKEWMKRQGRDLDQELE 233
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY-LIRTVLFSIPDNKLQNQ 195
++ I + ++ + E+ A+ Q+ + RE L+ L + P +
Sbjct: 234 DYRVKVITTEYLRMTLGPRLQVDLPEMLADYQQRREQFRREARLVWRELLADPARVGGRE 293
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254
E RL+ +D + + S H V+ + + + ++
Sbjct: 294 AAAGLARNWLE--RLQHGEDFAHIARTES--HGVTASDGGRW--ETTPEGYNRREVNQAL 347
Query: 255 NNTTNP-----YVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKK 307
T P ++ GV I + + G + ++ L + K+++ +++
Sbjct: 348 AAMTPPSPPVLVESEDGVHVIQLESRTQAGFQPFSDVQDQLRERLFQAKLQQESRRLLER 407
Query: 308 LRSNAII 314
LR I
Sbjct: 408 LRQTTPI 414
>gi|319779411|ref|YP_004130324.1| hypothetical protein TEQUI_1261 [Taylorella equigenitalis MCE9]
gi|317109435|gb|ADU92181.1| hypothetical protein TEQUI_1261 [Taylorella equigenitalis MCE9]
Length = 644
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 16/168 (9%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR--IALLKLQKINGELEKIA------ 76
F Y ++S + +N E IT+ +K L L+ G K++
Sbjct: 24 FVFFGTSKYSGMSISEKPLVKVNKEKITERQFNKSWTERLNSLRDQLGNNFKVSEIDTPA 83
Query: 77 -----VQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSSFLDKQG 128
+ +++ + L Q K+ + V + A + S E++++FL
Sbjct: 84 NRNLWLNKIVDDILITQTANKNKFFGSDSMVRSAIALDPKFAVDGKFSMENYNAFLTSAN 143
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
I ++ YL + VV+ L K K V+
Sbjct: 144 ITSQEYENYLRANTGINLVVEPLINSTLVPLTTLEELKKHVTKTREVQ 191
>gi|294782675|ref|ZP_06748001.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 1_1_41FAA]
gi|294481316|gb|EFG29091.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. 1_1_41FAA]
Length = 563
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
IA ++I + L + + S+ VN + + + G E F L QG+ +
Sbjct: 81 IAFNDVIDKKLTLDLAKSLKVKVPSSEVNAQYEELESSMG-DKEQFRRMLQVQGLTKDSL 139
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
K + + + +F + EI A
Sbjct: 140 KNKIEENLLMQK-TREEFSKNINPTDEEINA 169
>gi|262068174|ref|ZP_06027786.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium periodonticum
ATCC 33693]
gi|291378117|gb|EFE85635.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium periodonticum
ATCC 33693]
Length = 563
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
IA ++I + L + + S+ VN + + + G E F L QG+ +
Sbjct: 81 IAFNDVIDKKLTLDLAKSLKVKVPSSEVNAQYEELESSMG-DKEQFRRMLQVQGLTKDSL 139
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
K + + + +F + EI A
Sbjct: 140 KNKIEENLLMQK-TREEFAKNINPTDEEINA 169
>gi|163790772|ref|ZP_02185198.1| peptidylprolyl isomerase [Carnobacterium sp. AT7]
gi|159873952|gb|EDP68030.1| peptidylprolyl isomerase [Carnobacterium sp. AT7]
Length = 339
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 98/297 (32%), Gaps = 35/297 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ + + S + IT+ + A +K + L+++ +++++
Sbjct: 4 LLLATATILAGFTIAGCSDSTVASSTAGKITEEEF---YAEMKDTVGSSMLQQLIIEDVL 60
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ G V+ + + G AE F + +QG +K + +
Sbjct: 61 TDL--------YGDKVTDKVVDKQYTTEETSMG-GAEAFEYLMLQQGYTPEKYKDTIRLN 111
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+++ K + EI Q + V +L +++ + + + +
Sbjct: 112 L----LIEAAVKDKTKFTKEEI----QTAYDAYVPSVKAAHILV---EDEAKAKDLIAQL 160
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN- 259
A+ ++L + + G ++ P+F+ + T
Sbjct: 161 NDGADFAKLAKENSADTAT--------AANGGEVTFSSGEMVPEFEEAAYALKEGEMTTE 212
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AEYVKKLRSNAII 314
P T+ G I + DK + G + Q TK+ + + + +A I
Sbjct: 213 PVATEYGFHIIKMIDKPEKGTLKEETDTIKDQLLQTKLADSAYIQKVMSGIMKDANI 269
>gi|77360982|ref|YP_340557.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (rotamase D)
[Pseudoalteromonas haloplanktis TAC125]
gi|76875893|emb|CAI87114.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)
[Pseudoalteromonas haloplanktis TAC125]
Length = 633
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 64/199 (32%), Gaps = 21/199 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ I + V++ F + I SY + +NG I+ + ++
Sbjct: 1 MLEKIREGSQGPIAKVILGAVILSFALAGIGSYLGQTTEQPV-AEVNGIKISQTEFNRAF 59
Query: 61 A-------------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
++ ++ + + L+ + L+ Q + G+ +V
Sbjct: 60 QNERGRLEQQFGEYFTQIAADPNYMAQIRQGVIDRLVQQELQTQLAAELGLRVSDESVRQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ + + + + + + F++YL +V L+
Sbjct: 120 TILELPYFKIGESFNNDRYLQVIRQMNFQPDSFREYLRKDMTRSQLVSA-VAGSDFALKN 178
Query: 162 EIPANKQKMKNITVREYLI 180
E+ + + +YL+
Sbjct: 179 ELESAIALQQQTRSIDYLV 197
>gi|317504768|ref|ZP_07962727.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315664099|gb|EFV03807.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 470
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 85/295 (28%), Gaps = 50/295 (16%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA---VQ 78
+I ++ S + TING+ + A K Q NG K +
Sbjct: 1 MISLAMLLCGSMAFGQTDDPVLMTINGKPVKRSAFE--FAYKKYQTANGFERKSVGDYAE 58
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+ + LK +E + + F A + + +
Sbjct: 59 QYANDKLKVEEALSQRLDTLPS----FLQLFAAYRNQQIPQTLDNDAETEVEARRLYAF- 113
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGF 197
+ + A+ +K +R +L + Q +
Sbjct: 114 --------------------TQQRVDASGGMIK--------VREILLRLGQRASKQTEIE 145
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNL-LKKSQN 255
V++RI + +++ ++G +LL P+F+ +
Sbjct: 146 VKQRIDSIYNALQHGADFGEMARRYSDNKTATNLGEHQPWLLPGQTLPEFETQAYALKKG 205
Query: 256 NTTNPYVTQKGVEYIAICDK---------RDLGGEIALKAYLSAQNTPTKIEKHE 301
+ P++T G I I DK R+ + L + T ++++
Sbjct: 206 EMSTPFLTPAGYHIILIEDKSAYFPYDSVRNDLLRFVSQRNLRNKLTAARLQERS 260
>gi|242243062|ref|ZP_04797507.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis
W23144]
gi|242233520|gb|EES35832.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis
W23144]
Length = 322
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 83/244 (34%), Gaps = 32/244 (13%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L K +K D+ ++ + + G + F S L +QG+ + +K+ +
Sbjct: 61 LNKILADKYKDKVDTKDIDKDIKKEEKQYGGK-DQFESMLKQQGMSLDDYKEQKKL---- 115
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF------- 197
K + K + EI K+ K + +L + +G
Sbjct: 116 SAYQKQLLLDKVNVSDKEI---KENSKKAS-------HILIKVKSKSSDKEGLSDKKAKE 165
Query: 198 -VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K K+ E++ + + K +S G Y+++ + F+ L K +
Sbjct: 166 KAEKIQKEVEKNPNKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVDSFEKALFKLKEG 223
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA---EYVKKLRSNA 312
+ T G I + D E K+ + + K++K + K+L
Sbjct: 224 EVSKVVKTDYGYHIIKADKETDFNSE---KSNIKQKLIEEKVQKKPKLLTDAYKELLKEY 280
Query: 313 IIHY 316
+ Y
Sbjct: 281 KVDY 284
>gi|145634178|ref|ZP_01789889.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
PittAA]
gi|145268622|gb|EDK08615.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
PittAA]
Length = 622
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/376 (10%), Positives = 112/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRI--ALLKLQK 67
++ + +V +S ++ + +NGEVI+ D ++R A +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFMGQSD 80
Query: 68 ING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNSVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q + +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEIFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--------------------------- 190
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISKNLQVTDIEIAQY 258
Query: 191 -KLQNQGFVQKRIKDAEES----------RLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ F+ +R+ + + L+ + + K S KI + G ++
Sbjct: 259 YQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAKTKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|312867264|ref|ZP_07727474.1| putative peptidylprolyl isomerase PrsA1 [Streptococcus
parasanguinis F0405]
gi|311097393|gb|EFQ55627.1| putative peptidylprolyl isomerase PrsA1 [Streptococcus
parasanguinis F0405]
Length = 314
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/306 (10%), Positives = 93/306 (30%), Gaps = 36/306 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ V ++ +V+ + A + + T+ G+ I+ D I Q L +
Sbjct: 1 MKKKLVAGAVTLLSVVTLAACANGTNKDVVTMKGDAISVSDFYDEIKTN--QGAQQVLFQ 58
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + ++ ++ G V+ + A+ + F ++L +QG+ +
Sbjct: 59 MTINKVFE--------KEYGSKVSDKEVDK---ELAKQKKQLGKQFDAYLAQQGLTEETA 107
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
K+ + + V + + + + + +
Sbjct: 108 KKQIRSNMLLEYAVNQAAKKDIKESDYKAAFESYTPE--------VTAQIIKLNSEDKAK 159
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKS 253
+ + + A+ +++ + K G A + Q + K
Sbjct: 160 EVLEAAKAEGADFAQIAKDNSTDTATKDKGGEVKFDSGTAG------IPSQVKEAAFKLD 213
Query: 254 QNNTTNPYVTQKG------VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+N ++ G + + K + G + K + K + Y++
Sbjct: 214 ENGISDVITVSAGQNYSASYYIVKLNKKTEKGSDW-KKYEKRLKEIIVDGRKQDTNYIRS 272
Query: 308 LRSNAI 313
+ + A+
Sbjct: 273 IIAKAM 278
>gi|288803874|ref|ZP_06409299.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella
melaninogenica D18]
gi|288333639|gb|EFC72089.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella
melaninogenica D18]
Length = 459
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 82/258 (31%), Gaps = 28/258 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQ------KINGELEKIAVQELIVETLKKQEIEKS 93
+ + E I ++ +++LQ K NG+ E I +++ V+ L +
Sbjct: 33 DEVIWVVGDEPILKSEVE----IMRLQSEAEGTKWNGDPECILPEQIAVQKLFLHQAALD 88
Query: 94 GITFDSNTVNYFFV----------QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ + + Q L A S + + +K L +Q +
Sbjct: 89 SVEVSESEIARGIDDQINYWISLPQIGSKEKLEAFQNKSMTQIRQDLHDDYKNRLLVQKV 148
Query: 144 WPDVVKNDFMLKYGNLEM-EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
++V + E+ E + + +L P + + ++ ++
Sbjct: 149 QQNLVN---DVAVSPAEVREYFKKLPVDSIPMIPTTVEVEILTQTPKIETEEINRIKNQL 205
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTT 258
+D + + L + S+ + G+ Y+ L P F +
Sbjct: 206 RDYTDRVTKGETSFATLARLYSEDPGSARQGGELGYMGRGVLDPAFAAAAFNLTDPKKIS 265
Query: 259 NPYVTQKGVEYIAICDKR 276
++ G I + D+R
Sbjct: 266 KVVESEFGYHIIQLIDRR 283
>gi|194333180|ref|YP_002015040.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris
aestuarii DSM 271]
gi|194310998|gb|ACF45393.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris
aestuarii DSM 271]
Length = 694
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 4/110 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+ +L P + ++R L+ K + L + S
Sbjct: 333 RKSGTDGAVVRASHILLGFPAGDAAARNDAEERAASIMN-ELKNGKSFDLLAREFSDDPG 391
Query: 229 VS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ G + + + P F+ + P TQ G+ I + +
Sbjct: 392 SAPHGGDLGWFAKGAMVPDFEKAAFGAAPGRVVGPVATQFGLHIIKVTGR 441
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 74/240 (30%), Gaps = 20/240 (8%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQSI-----WP 145
I SNT+ + A + A D F L G+ + + I
Sbjct: 453 RSIRPSSNTL-ESVRRTAAEFQIEAVDKGFQKALGASGLKVSSTGPFTKNGMIPGIGFNN 511
Query: 146 DVVKNDFMLKYGNLEMEIPANKQ------KMKNITVREYLIRTVLFSIPDN-KLQNQGFV 198
+ + F G++ + + +N + L TV I + + +G
Sbjct: 512 QITRFAFDASKGDVSDVVATDDGFVVLQVTERNDSGYRSLDETVRDQITRLLRDRKKGVA 571
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNT 257
+ A + + ++ L + + V + ES P L ++
Sbjct: 572 LDAMLSAGLASSK--QNLEALSRSLAGSKLVKASDIRRNAESAYDPFLLEALSGMKPSSV 629
Query: 258 TNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ P T+ G IA+ K D + L K E+ +Y LR A I
Sbjct: 630 SLPVETRSGRALIALESKSYPDGMDPDEARRRLRPLVERAKTEQVIEDYFNALRREATIE 689
>gi|34557645|ref|NP_907460.1| cell binding factor 2 precursor major antigen PEB4A [Wolinella
succinogenes DSM 1740]
gi|34483362|emb|CAE10360.1| CELL BINDING FACTOR 2 PRECURSOR MAJOR ANTIGEN PEB4A [Wolinella
succinogenes]
Length = 271
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 112/304 (36%), Gaps = 48/304 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQE 79
+I + I+ ++S++ +++G+ ITD DIS + + + ++ +++K +++
Sbjct: 5 LISSVAAILLLSGLSLSAKTLASVDGDEITDKDISVMLRAMPGVSYDQLPEDMQKKVLEQ 64
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L ++ + GI +F L+ K+ L
Sbjct: 65 AIERKLLAKQAKSEGIQNSK-------------------EFKDALEDA-------KEDLT 98
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
++ + N K +M ++ K K + + +L QN+ +
Sbjct: 99 LEVWMRQQMNN---AKVSEGDMRKFYDENKEKFVQPELVKAKHILV-------QNEKEAK 148
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQN-LLKKSQNNT 257
+ I + ++ + + ++L K S + G+ + + + P+F N + +
Sbjct: 149 EVIAEIGKAGAKASEKFSELAKSKSIDPAGQNGGELGWFSKDQMVPEFANAAFALQKGSY 208
Query: 258 T-NPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P TQ G I DK+ ++ K + K + KKLR A
Sbjct: 209 SKTPVKTQFGYHVIYAEDKKAQAVLPYEDV--KPQIEQNLKIQKFRDSVSSTAKKLREKA 266
Query: 313 IIHY 316
+ +
Sbjct: 267 QVTF 270
>gi|299529221|ref|ZP_07042666.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
gi|298722844|gb|EFI63756.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
Length = 263
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 89/280 (31%), Gaps = 52/280 (18%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING--ELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG+ + ++ ++ E+EK+ E+I + QE + G+
Sbjct: 29 VAIVNGKAVPMARVNALKTQIEASGQPVVPEMEKMIKDEVIAREIFMQEANRRGLAGSEA 88
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ AR T L F F K +
Sbjct: 89 YKQQM--EMARQTVLIRALFDD-----------------------------FRKKNPVTD 117
Query: 161 MEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E A K + +EY +L D A + ++ K +
Sbjct: 118 AEAKAEYDKFVAANGGKEYKASHILVESED------------RAKAIIAEVKAGKKFEDI 165
Query: 220 EKFASKI--HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT-NPYVTQKGVEYIAICDK 275
K SK G + ++ P+F + L+K + T P +Q G I + D+
Sbjct: 166 AKKESKDPGSGARGGDLDWANPNNYVPEFTEALIKLKKGEMTDAPVKSQFGWHIIRMDDE 225
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R E+ + Q T ++ E ++ +LR +A I
Sbjct: 226 RQ--AEMPKFEDVKPQITQQLQQQKEQQFQDQLRKSAKIQ 263
>gi|229846060|ref|ZP_04466172.1| lipoprotein signal peptidase [Haemophilus influenzae 7P49H1]
gi|229811064|gb|EEP46781.1| lipoprotein signal peptidase [Haemophilus influenzae 7P49H1]
Length = 622
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/376 (10%), Positives = 112/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRI--ALLKLQK 67
++ + +V +S ++ + +NGEVI+ D ++R A +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFMGQSD 80
Query: 68 ING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNSVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q + +
Sbjct: 141 RILQQNRLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEIFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--------------------------- 190
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISKNLQVTDVEIAQY 258
Query: 191 -KLQNQGFVQKRIKDAEES----------RLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ F+ +R+ + + L+ + + K S KI + G ++
Sbjct: 259 YQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAKTKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|326572731|gb|EGE22717.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis BC7]
gi|326574047|gb|EGE23996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis CO72]
gi|326577330|gb|EGE27217.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis O35E]
Length = 367
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+R +L + P + + + ++K+ + +S R ++++ G+
Sbjct: 210 TLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFACRYSACPSKDDGGEL 269
Query: 235 QYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQ 291
L + P+F++ + + NP T+ G+ I + K++ +AY +
Sbjct: 270 GVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENH 329
Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314
+Y+ +L A I
Sbjct: 330 LKQQSFHHSLCDYLFELSQKADI 352
>gi|148826351|ref|YP_001291104.1| lipoprotein signal peptidase [Haemophilus influenzae PittEE]
gi|148716511|gb|ABQ98721.1| lipoprotein signal peptidase [Haemophilus influenzae PittEE]
Length = 622
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/376 (10%), Positives = 112/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRI--ALLKLQK 67
++ + +V +S ++ + +NGEVI+ D ++R A +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFMGQSD 80
Query: 68 ING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNSVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + GI ++ F + Q + +
Sbjct: 141 RILQQNRLTSDGYASILRASLPLEQIQNGIANSEF--IVPAQVKNSAEIFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--------------------------- 190
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISKNLQVTDVEIAQY 258
Query: 191 -KLQNQGFVQKRIKDAEES----------RLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ F+ +R+ + + L+ + + K S KI + G ++
Sbjct: 259 YQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAKTKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|331092188|ref|ZP_08341018.1| hypothetical protein HMPREF9477_01661 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401960|gb|EGG81534.1| hypothetical protein HMPREF9477_01661 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 246
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 86/281 (30%), Gaps = 46/281 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
MS ++ T+ G+ IT+ ++ + + ++ + + + + + G
Sbjct: 1 MSEKVLATVAGQPITEEELQAFLNNVPREQQPYINNPQFRDQCLEQLISLHLFAQMGEEM 60
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
E+F L K+ + Q + +K +
Sbjct: 61 KLEE---------------TEEFQQILKNA-------KKDILAQLAMRETMKGVEVSDEE 98
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
++Q K TV + +L ++ Q ++ +
Sbjct: 99 VKAYYDANSQQFKKGATVS---AKHIL-------TDSEEKCQTILESILNGEKTFE---D 145
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
++F++ G + +F+++ + P TQ G I + ++
Sbjct: 146 SAKEFSTCPSGTRGGDLGQFGRGQMVKEFEDVAFEAEIGEVKGPVKTQFGYHLIKVENRT 205
Query: 277 DLGG-------EIALKAYLSAQNTPTKIEK---HEAEYVKK 307
+ E ++ + + +E+ + +Y++K
Sbjct: 206 EESVAAFDEVKETIRRSLVQQKQNAKYMEQVNVLKEKYLEK 246
>gi|118588533|ref|ZP_01545942.1| hypothetical protein SIAM614_24667 [Stappia aggregata IAM 12614]
gi|118439239|gb|EAV45871.1| hypothetical protein SIAM614_24667 [Stappia aggregata IAM 12614]
Length = 296
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 85/290 (29%), Gaps = 50/290 (17%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQK-INGELEKIAVQELIVETLKKQ 88
+ S A + + IT+ D++ L +LQ+ + K+ + ++ L
Sbjct: 20 TVLSAAEPDDVVAKVGDTEITEADLAFAAQDLGKELQRFPPAQWRKLLLDVMVDMELMAH 79
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ G+ D + F L +L ++++ +
Sbjct: 80 AAREEGLDKDPD-------------------FQRQL-----------DFLKLRALRNAYL 109
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + E++ +K+ E R +L K +A +
Sbjct: 110 AQKIDGEVTDEEVQAAYDKEFADFEGAEEINARHILVK------------DKAEAEAIIA 157
Query: 209 RLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN-PYVTQK 265
L D +L + S + G Y + + P T P TQ
Sbjct: 158 ELDGGADFAELAREKSTGPSGPNGGSLGYFAKGQMVPPFEAAAFALEPGTYTKEPVETQF 217
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I + DKR E ++ + + + +L+ +
Sbjct: 218 GWHVIKLEDKRRQ--EKPAFEEVANGLRQQLMRERYDARMAELKDQVAVE 265
>gi|290769658|gb|ADD61438.1| putative protein [uncultured organism]
Length = 520
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 98/311 (31%), Gaps = 56/311 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++L +F L V A + ING+ + + + G
Sbjct: 5 VRLFWVFFFLGFGLAVS-------AQDDPVLMRINGKEVLRSEFERSYNKGGTSVGAGRK 57
Query: 73 EKIA-VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
A V + I LK + E G+
Sbjct: 58 ALDAYVNKFIDFRLKIEAAEVVGL------------------------------------ 81
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPD 189
+ + + Q + + ++ E E KMK+ R Y ++ + +P
Sbjct: 82 DTSRVFQKEQDEYRRCLIKSYLTDEETAEQEARQYYDKMKSGRRAGRVY-VKHIFKYLPQ 140
Query: 190 N-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
N ++ R+ + + + + D KA ++ + +F++
Sbjct: 141 NISGHTLREMESRMDSIYRALAKEGGAVPSFDACVEQFSD--EKKAFWVGWLQMPVEFED 198
Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + + P++T +G+ + + +++++ E + Q ++K +V
Sbjct: 199 IVFGLNAGEISRPFLTPQGIHIVKVLEQQEILPFERMKDKIIRCQTRRHGMDKGTRAFVD 258
Query: 307 KLRSNAIIHYY 317
KL+ Y+
Sbjct: 259 KLKK----EYH 265
>gi|291482444|dbj|BAI83519.1| hypothetical protein BSNT_00126 [Bacillus subtilis subsp. natto
BEST195]
Length = 297
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 44/321 (13%), Positives = 108/321 (33%), Gaps = 39/321 (12%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K T + + L + + + + S + S TI G+ +T +
Sbjct: 2 KSRTIWTIILGALLVCCIAVAYTLTK--SQTGASSSGESIATIGGKSVTREE-------- 51
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L+++ + K ++++I + +Q +K+ + + V+ F+ SF
Sbjct: 52 WLKEMEDQYGKSTLEDMINVRVVEQLAKKNNLKISKSEVDREFLLIKAVNN-------SF 104
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+ + + +K + + +++ D + N E+E NK K Y IR +
Sbjct: 105 YEDEHTTEKEWKDQIRYNILLEELLTRD--IDISNKELESFYNKNKELYQFDDSYRIRHI 162
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD-- 241
+ ++ ++ +K+ + + E+ + G ++ E+
Sbjct: 163 VVK-------DEEEAREVLKE---LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDN 212
Query: 242 LHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTK 296
+ + K ++ + P G I + +K R +
Sbjct: 213 IPSAYIEEAKTLKEDEWSQEPIKVNNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQL 272
Query: 297 IEKHEAEYVKKLRSNAIIHYY 317
+K VK L A + ++
Sbjct: 273 GDKAT---VKTLWKEADVSWF 290
>gi|197248545|ref|YP_002145433.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197212248|gb|ACH49645.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 623
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|326622155|gb|EGE28500.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 611
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 74 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 133
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 134 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 193
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 194 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 253
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 254 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 313
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 314 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 362
>gi|168465546|ref|ZP_02699428.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195631887|gb|EDX50407.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 623
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|198244647|ref|YP_002214406.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197939163|gb|ACH76496.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
Length = 623
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|160890576|ref|ZP_02071579.1| hypothetical protein BACUNI_03019 [Bacteroides uniformis ATCC 8492]
gi|317479882|ref|ZP_07938999.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_1_36]
gi|156859575|gb|EDO53006.1| hypothetical protein BACUNI_03019 [Bacteroides uniformis ATCC 8492]
gi|316903956|gb|EFV25793.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 4_1_36]
Length = 520
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 99/311 (31%), Gaps = 56/311 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++L +F L V A + ING+ + + + G
Sbjct: 5 VRLFWVFFFLGFGLAVS-------AQDDPVLMRINGKEVLRSEFERSYNKGGTSVGAGRK 57
Query: 73 EKIA-VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
A V + I LK + E +G+
Sbjct: 58 ALDAYVNKFIDFRLKIEAAEVAGL------------------------------------ 81
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPD 189
+ + + Q + + ++ E E KMK+ R Y ++ + +P
Sbjct: 82 DTSRVFQKEQDEYRRCLIKSYLTDEETAEQEARQYYDKMKSGRRAGRVY-VKHIFKYLPQ 140
Query: 190 N-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
N ++ R+ + + + + D KA ++ + +F++
Sbjct: 141 NISGHTLREMESRMDSIYRALAKEGGAVPSFDACVEQFSD--EKKAFWVGWLQMPVEFED 198
Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + + P++T +G+ + + +++++ E + Q ++K +V
Sbjct: 199 IVFGLNAGEISRPFLTPQGIHIVKVLEQQEILPFERMKDKIIRCQTRRHGMDKGTRAFVD 258
Query: 307 KLRSNAIIHYY 317
KL+ Y+
Sbjct: 259 KLKK----EYH 265
>gi|326567917|gb|EGE18014.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis BC1]
Length = 360
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+R +L + P + + + ++K+ + +S R ++++ G+
Sbjct: 203 TLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFACRYSACPSKDDGGEL 262
Query: 235 QYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQ 291
L + P+F++ + + NP T+ G+ I + K++ +AY +
Sbjct: 263 GVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENH 322
Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314
+Y+ +L A I
Sbjct: 323 LKQQSFHHSLCDYLFELSQKADI 345
>gi|270156946|ref|ZP_06185603.1| peptidyl prolyl cis-trans isomerase D-like protein [Legionella
longbeachae D-4968]
gi|289164629|ref|YP_003454767.1| peptidyl-prolyl cis-trans isomerase D [Legionella longbeachae
NSW150]
gi|269988971|gb|EEZ95225.1| peptidyl prolyl cis-trans isomerase D-like protein [Legionella
longbeachae D-4968]
gi|288857802|emb|CBJ11647.1| putative peptidyl-prolyl cis-trans isomerase D [Legionella
longbeachae NSW150]
Length = 624
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 18/211 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDIS- 57
M K+ + + L + I F + + Y ++ + +N +T D S
Sbjct: 1 MLQKLNERIQGVVAWLVVILIGITFTLFGVDYYLQSRQTTNAKVVVNDFPLTLQAFDTSY 60
Query: 58 KRIALLKLQKI-----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQH 109
+R ++ +L+ + ++I + Q K+G ++ N Q
Sbjct: 61 RRARAMQDLSQLTAADEKKLQNQVLDQMINNEVLVQAARKNGFNVSADQANAAILSIPQF 120
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
+ SA+ + L+ + F+ + + + FM L EI
Sbjct: 121 QEDGHFSAQKYQQALNAALFTQSSFQNEVKQGMLLNQ-QRFAFMGSSFALPDEIDRFVSL 179
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
EYLI +P ++ + + +
Sbjct: 180 YMQSRDYEYLI------VPVSRFEKDVQISQ 204
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 79/199 (39%), Gaps = 21/199 (10%)
Query: 132 NHFKQYLAIQSIWPDVVKNDF-----MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
H ++++A + + D V + + +++ + + +T + + +LF+
Sbjct: 213 KHKREFMAPEKVSLDYVNLSMHDIKDKVNVSDDDVKRYYEENQNNYLTPARWHVAHILFA 272
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESD 241
+P N+ ++K A + L L KD + + SK+ D G ++
Sbjct: 273 VPQGA--NKDELEKIQNKANSTYLLLQKDPKQFDHLVSKMSDDKLSVADNGVLPWIAAGQ 330
Query: 242 LHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKI 297
++ LL + ++P T+ G E + D + + + ++A + Q +
Sbjct: 331 --NEYSKLLSHLTTPGQISSPEKTKHGYEIFKLIDYKPVSTKPLSEVEASIKEQLV---V 385
Query: 298 EKHEAEYVKKLRSNAIIHY 316
E + +Y + + + + Y
Sbjct: 386 EMAQTQYTQAMEQLSDLSY 404
>gi|284097541|ref|ZP_06385612.1| secreted protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830948|gb|EFC34987.1| secreted protein [Candidatus Poribacteria sp. WGA-A3]
Length = 178
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL------EKI 75
LI+FCI V ++ I +N + IT ++ + + + +I ++
Sbjct: 8 LILFCIGGNVYAQTL--IDSIIAVVNEDAITRSELEDELRIATVFRIRTAPISTTAEQRT 65
Query: 76 AVQELIVETLKKQEIEKSGITFDSN--TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ +I QE E+ GI V + + S F + L + +
Sbjct: 66 GLNTIINRKFVLQEAERLGIIVTERNTQVAAKIAEISAKYA-SETVFQNVLQEAQLEKEA 124
Query: 134 FKQYLAIQSIWPDVVKNDFML 154
+ + Q I+ + + F +
Sbjct: 125 VEAQVYDQLIYDEFFRRIFSM 145
>gi|260776378|ref|ZP_05885273.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio coralliilyticus
ATCC BAA-450]
gi|260607601|gb|EEX33866.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio coralliilyticus
ATCC BAA-450]
Length = 619
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + +I + L +Q E G+ + V V + + + + L + G
Sbjct: 88 RKSVLDRMINDLLLEQHAESLGLRVSDSQVRSMIVDMPQFQVDGKFDQEIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ F +YL D+V+N + + + + + + I+ V S+ D
Sbjct: 148 SPDSFAEYLR-----RDLVRNQLLTAIQASDFSLEGEVEAQSKLLTQTREIKKVTLSLSD 202
Query: 190 NKLQNQGFVQKR 201
+ + Q+
Sbjct: 203 FASKAELSEQEI 214
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 18/217 (8%), Positives = 64/217 (29%), Gaps = 26/217 (11%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ +EI+K ++ A LS ++ + + + + + ++ +
Sbjct: 189 QTREIKKVTLSLSD---------FASKAELSEQEINDYYTQ---NPERYTRPEQVKVAYV 236
Query: 146 DVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + + Q+ K + + + +L + ++ Q +
Sbjct: 237 ELSAQQLKDAIDVSDEQAKQYYQEHLDKYSSEEQRRVSHILI-----EGDDEAKAQAILD 291
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPY 261
+ + + G ++ + P F+ K + T
Sbjct: 292 ELNAGAD-FATLAEEKSDDFGSASE--GGSLGWIERDVMDPAFEEAAFALKKAGDVTGLV 348
Query: 262 VTQKGVEYIAICDKRDLGGEIALK--AYLSAQNTPTK 296
+ G I + + +D + + + + + +
Sbjct: 349 KSDFGYHIIKLDELKDSVAKPYEEVASEIKQELKDQQ 385
>gi|225850233|ref|YP_002730467.1| hypothetical protein PERMA_0679 [Persephonella marina EX-H1]
gi|225646664|gb|ACO04850.1| hypothetical protein PERMA_0679 [Persephonella marina EX-H1]
Length = 461
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 13/141 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIALLKLQKI-- 68
L T F + V IV YK + +NG I+ ++ L+ Q +
Sbjct: 15 LFITTFAFVGTAFVAIVIYKFAGNITG-AAVVNGREISLQEFYYQVNVIQNRLENQGVDT 73
Query: 69 ---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSS 122
E+ A++ +I L QE EK GI V + S + + +
Sbjct: 74 APLKKEIYDQALEAVIDRELLYQEAEKEGIAATKEEVKRAILDVEAFKEDGRFSKDRYIA 133
Query: 123 FLDKQGIGDNHFKQYLAIQSI 143
L I F++ +
Sbjct: 134 LLSGMNISPQLFEEIVRKDLS 154
>gi|222839387|gb|EEE77724.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/240 (21%), Positives = 78/240 (32%), Gaps = 26/240 (10%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--AI 140
E LK+Q IE+SG + E L +KQ L A
Sbjct: 15 EALKQQ-IEQSGRPVTPELEGQIKEEVIAREIFMQEANKRSLANS----EAYKQQLELAR 69
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q+I + DF K + E A K + +EY +L D
Sbjct: 70 QTILIRALFEDFQKKNPVTDAEAKAEYDKAVAANSGKEYKASHILVESED---------- 119
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQN-LLKKSQNN 256
A + ++ K + K SK G + + P+F L+K +
Sbjct: 120 --RAKAIIAEIKAGKKFEDIAKKESKDPGSGARGGDLDWANPGNYVPEFSEALIKLEKGG 177
Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T P TQ G I + D R E+ + Q ++ A++ + LR A I
Sbjct: 178 MTQEPVKTQFGYHIIRLDDARQ--AELPKFEEVKPQIVQQLQQQKLAQFQESLREKAKIQ 235
>gi|332878100|ref|ZP_08445830.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684062|gb|EGJ56929.1| PPIC-type PPIASE domain protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 479
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 70/217 (32%), Gaps = 21/217 (9%)
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D TV+ + N L E + LD + + FK+ + D + +
Sbjct: 56 VDKKTVDEYVDLF-VNYKLKVE---AALDARYDTLSSFKKEFR---TYRDQQIRPYFVSV 108
Query: 157 GNLEMEIPANKQKMKNITVREYLI--RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E E+ MK + LI ++ + + K D+ + L+
Sbjct: 109 SAEEKELKRYYDGMKASIGPDGLIHPAHIMILVAQKATPEEQAKAKERIDSIYTALQQGA 168
Query: 215 DCNKLEKFASKIHD--VSIGKAQ-YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
D L K S G + + +F+++ ++ + P+ + G +
Sbjct: 169 DFATLAKQCSADKGSAARGGDLGGWFAKGQTMKEFEDVAFSLNKGEMSKPFQSPMGYHIV 228
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ D++ + + P E+ +K+
Sbjct: 229 LMKDRK--------QLESYEELKPQLQRFLESRGLKE 257
>gi|224582290|ref|YP_002636088.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224466817|gb|ACN44647.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 623
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|295132738|ref|YP_003583414.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zunongwangia
profunda SM-A87]
gi|294980753|gb|ADF51218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zunongwangia
profunda SM-A87]
Length = 467
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 22/287 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ-----ELIVETLKKQEIEKSG 94
I I +I D DI K + G L+ L + +
Sbjct: 47 DGIAAVIGDYIILDSDID---LTRKDIQSQGNSTANVTDCQLAGSLMENKLYAHQAIQDS 103
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLD-KQGIGDNHFKQYLA---IQSIWPDVVKN 150
I +N + Q L+ + + F+ L QS ++
Sbjct: 104 IIVPDAQINNYIDQQIAGMVRQLGSIEDVLEFYKRDSEAEFRNELFDLNKQSQLAQKMRQ 163
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ E+ A ++ ++ + + I + QK I + R
Sbjct: 164 KIIENIEVTPEEVRAYFNEIPKDSLPVFGDEVEISEIVVKPEVPEEEKQKTIDRLNQFRE 223
Query: 211 RLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264
+ ++ +K A D +I +F+++ + + P+ T
Sbjct: 224 DVLENGSKFATKAILYSDDTQTGGNILSLGRKDA--FVKEFKDVAFSLREGEISEPFETT 281
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + R ++ + L + + + + ++R
Sbjct: 282 YGYHIIQLVKVRGQEIDV--RHILLIPDVNNAAVEKAKKEIDQVREK 326
>gi|126656393|ref|ZP_01727654.1| hypothetical protein CY0110_21857 [Cyanothece sp. CCY0110]
gi|126622079|gb|EAZ92786.1| hypothetical protein CY0110_21857 [Cyanothece sp. CCY0110]
Length = 247
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 79/245 (32%), Gaps = 29/245 (11%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+ + I +KL + + L+ + QE E++ I ++ + Q L
Sbjct: 9 VEEIIKEIKLSGK----MREITEGLMNRRIITQEAERANIKVETEELQQAADQFRLRHNL 64
Query: 116 -SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA---NKQKMK 171
SA+ +L + + F++ L I + KN F K + +
Sbjct: 65 ESADQTHQWLTRSQLSIEDFEEILHFSIISGKLAKNLFDDKVEPYFYQNQLNYTEVIMYE 124
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
I E L + ++I +N++ + I+D E R
Sbjct: 125 IILDDEDLAMELYYAIDENEISFWDVAHQYIQDIELRR--------------------KG 164
Query: 232 GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
G + +L P+ + + P +T +G+ + + + + + + +
Sbjct: 165 GYLGSVKRQELKPEISAAIFAANPPQLLKPIMTSQGIHLVFVEEIIQPELDEKKRHKILS 224
Query: 291 QNTPT 295
Sbjct: 225 DLFSE 229
>gi|170721642|ref|YP_001749330.1| hypothetical protein PputW619_2461 [Pseudomonas putida W619]
gi|169759645|gb|ACA72961.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 213
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 46/145 (31%), Gaps = 9/145 (6%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L A+ ELI + L QE ++ GI V+ + S F L + G
Sbjct: 62 LRSQALDELIDKELLWQEAQRRGIAISDEQVSAQLGEVEAAFS-SPALFERRLAEAGFDR 120
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-------NKQKMKNITVREYLIRTVL 184
+ YL + V + E+ A Q +N + +IR
Sbjct: 121 AAYADYLHRELA-AQQVYAQLSAVAEPTQAEVEAFYQANQERLQGAQNQSDNSSVIREQG 179
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESR 209
+ L +Q Q R + R
Sbjct: 180 LVLARASLISQLQAQSRQAARQRLR 204
>gi|83942078|ref|ZP_00954540.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36]
gi|83847898|gb|EAP85773.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. EE-36]
Length = 292
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 84/297 (28%), Gaps = 59/297 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWA---------MSSRIRTTINGEVIT-DGDISKRIALLKL 65
FV+ +P V+ A + + T+NG IT I R L
Sbjct: 7 FLAPFVVAASLALPAVAQDDTAEKTDAQTDVTAETVVATVNGTDITIGSMIIARA---TL 63
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ +L + + I++ L +Q V A
Sbjct: 64 PEQYQQLPPEVLFKGILDQLVQQTALSQDF---DGEVPKRIE-MALENE----------- 108
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
Q I +V++ E++ ++ E+ +L
Sbjct: 109 -------------RRQLIAGEVIEKAMAQDVTEEELQAAYDEAYADAEPTEEFSASHILV 155
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHP 244
+ + Q K+ +E D +L K S + G + + P
Sbjct: 156 -------ETEEEAQAVKKELDE-----GADFAELAKEKSTGPSGPAGGTLGWFGPGMMVP 203
Query: 245 QFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTK 296
F+ + + + + P TQ G I + DKR ++ + + +
Sbjct: 204 AFETAVAELEVGAVSEPVETQFGWHVIKLDDKRQKEAPKLEDVKDELETQVRQVKAQ 260
>gi|237653309|ref|YP_002889623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T]
gi|237624556|gb|ACR01246.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thauera sp. MZ1T]
Length = 631
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/381 (11%), Positives = 108/381 (28%), Gaps = 97/381 (25%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKING 70
+ + +++ F + +Y S + S+ + G I + + R +L++ G
Sbjct: 11 VAQVILALLIVPFAFFGMDAYFSDSGSANEAARVGGTTIGAWEFDQALREQQDRLRQDGG 70
Query: 71 -----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-------- 111
EL + ++ LI + + ++ + + A
Sbjct: 71 GQVDRALLQSAELRRAVLENLINQRVLALYAAENRLVVTPQQLQETIAGVASFQENGSFS 130
Query: 112 ---------NTGLSAEDFSSFLDK-------------QGIGDNH-FKQYLAIQSIWPDVV 148
G++ F + L + GI +++L Q V
Sbjct: 131 LQRYETLLRAQGMTPATFEARLAQDVRVQQIVAAVGDAGIVPQASARRFLDAQLESRSVR 190
Query: 149 KNDFMLKYGNLEMEIPANKQK---MKNITVRE---------------------------- 177
+ K ++++ + N T E
Sbjct: 191 EFRLSAKALAADVKVDDAQVSAYYEANPTRFERPARLQAEYLVFDRAAVERGVEVADDAV 250
Query: 178 ---YLIRTVLFSIPD-----------NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Y F +P+ ++ Q V + + +A +L D + A
Sbjct: 251 RAFYDGNPQRFGVPEERQARHILLALDQGAEQAEVDRVMAEARALVEQLRADPARFAALA 310
Query: 224 SKIH-----DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + G + + F++ + + P + GV + + D +
Sbjct: 311 KEKSQDPGSAGNGGDLGFFARGVMVGAFEDAVFSLQKGVIGEPVRSDFGVHIVEVTDIKP 370
Query: 278 LGGE--IALKAYLSAQNTPTK 296
+ A++A + A+ +
Sbjct: 371 SSVKPFEAVRAEILAELRAQE 391
>gi|298529972|ref|ZP_07017374.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509346|gb|EFI33250.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 628
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 75/242 (30%), Gaps = 19/242 (7%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF--SSFLDKQGIGDNHFKQYL----- 138
K +E + + V FF + + F F DK I + K+Y
Sbjct: 160 KMEEYVSLPAKPNEHEVQEFFNYVRSQAKIDYKLFEADEFHDKVSITEEQIKEYYQDNQD 219
Query: 139 ------AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDN 190
I+ ++ + E+ A Q ++ + E R +L + ++
Sbjct: 220 RFMEPEKIRIAHLELSPDALAGAQRVSSEEVEAYFQSHQSEFEQPEEVKARHILVEVEED 279
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL 249
+ + + + + L + + +L + S+ G ++ F+
Sbjct: 280 APELEQEQARERIEQILAELEMGQSFEELAREHSQCPSAAEGGDLGRFGRGEMVEPFEEA 339
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICD-KRDLGGEIAL-KAYLSAQNTPTKIEKHEAEYVK 306
+ ++P T+ G I + + ++ + + + K +Y
Sbjct: 340 AFDLTPGEVSSPVQTRFGWHLIKVEEYVEAASPDLEEVEDEIRRKIGREKAADQIGDYAD 399
Query: 307 KL 308
+
Sbjct: 400 DV 401
>gi|260428957|ref|ZP_05782934.1| ppic-type ppiase domain protein [Citreicella sp. SE45]
gi|260419580|gb|EEX12833.1| ppic-type ppiase domain protein [Citreicella sp. SE45]
Length = 282
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 46/270 (17%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ T+NG+ IT G +L ++ E + E++ + + Q ++++ + D
Sbjct: 29 DSVVATVNGQDITLG------HMLVIRAQLPEQYQQLGDEVLWDGILDQIVQQTVLAQDD 82
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ + LS ++ L + Q +A ++ + V+ + +Y
Sbjct: 83 R------AEETKRVTLSLDNERRSLMAAEVV-----QSIANDAVSDEAVQAAYDAEYATA 131
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ +E+ +L + A L D +L
Sbjct: 132 EL-------------GKEFNASHILVETEEE------------AQALIEELNGGADFAEL 166
Query: 220 EKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
K S + G+ + + FQ +++ S + + P TQ G I + D+R+
Sbjct: 167 AKTKSTGPSGPNGGELGWFGPGMMVEPFQAAVEQMSVGDISAPVQTQFGWHVIKLNDERN 226
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
E + A ++ Y+ +
Sbjct: 227 K--EAPQLEEVRADIELKLQQEAVQNYIDE 254
>gi|16763833|ref|NP_459448.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161615353|ref|YP_001589318.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167551732|ref|ZP_02345485.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990436|ref|ZP_02571536.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231441|ref|ZP_02656499.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168240281|ref|ZP_02665213.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261111|ref|ZP_02683084.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818936|ref|ZP_02830936.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194442454|ref|YP_002039695.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194448749|ref|YP_002044487.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194469679|ref|ZP_03075663.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197262652|ref|ZP_03162726.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200390757|ref|ZP_03217368.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|207855932|ref|YP_002242583.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|16418959|gb|AAL19407.1| peptidyl prolyl isomerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161364717|gb|ABX68485.1| hypothetical protein SPAB_03124 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401117|gb|ACF61339.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194407053|gb|ACF67272.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456043|gb|EDX44882.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197240907|gb|EDY23527.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|199603202|gb|EDZ01748.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205323503|gb|EDZ11342.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330915|gb|EDZ17679.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333949|gb|EDZ20713.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205340141|gb|EDZ26905.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205344153|gb|EDZ30917.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350111|gb|EDZ36742.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707735|emb|CAR32020.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261245735|emb|CBG23532.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267992168|gb|ACY87053.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157063|emb|CBW16547.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911485|dbj|BAJ35459.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084726|emb|CBY94517.1| putative protease maturation protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321226030|gb|EFX51081.1| Peptidyl-prolyl cis-trans isomerase ppiD [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322713525|gb|EFZ05096.1| Peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323128772|gb|ADX16202.1| Peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332987401|gb|AEF06384.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 623
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|255690563|ref|ZP_05414238.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides
finegoldii DSM 17565]
gi|260624024|gb|EEX46895.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroides
finegoldii DSM 17565]
Length = 460
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 43/315 (13%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-RI-ALLKLQKINGEL 72
VL +F V + + E I D+ + R+ AL ++ G+
Sbjct: 8 RFVVTLVLAVFANVATYAQDNVVDEVVWVV--GDEAILKSDVEEARMDALYNGRRFEGDP 65
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGL------SAE 118
+ +E+ V+ L + + I + N + Q + ++
Sbjct: 66 YCVIPEEIAVQKLFLHQAKLDSIEVSEAEIIQRVDMMTNMYIQQIGSKEKMEEYFNKTST 125
Query: 119 DFSSFL---DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
L + G+ +Q L + + P V+ F + IP
Sbjct: 126 QIRETLRDNARDGLTVQKMQQKLVGEIKVTPAEVRRYFKDLPQDSIPYIP---------- 175
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIG 232
+ ++ + P + V+K+++D + + D + L + S K + G
Sbjct: 176 -TQVEVQIITLQ-PKIPISEIEDVKKKLRDYTDRVTKGEIDFSTLARLYSEDKASAIKGG 233
Query: 233 KAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL-- 288
+ ++ + P + N+ + + ++ G I + +KR G+ ++
Sbjct: 234 ECGFMGRGMMDPAYANVAFSLQDPKKVSKIVESEFGYHIIQLIEKR---GDRVNTRHILL 290
Query: 289 SAQNTPTKIEKHEAE 303
+ + ++ + A
Sbjct: 291 RPKVSEKELTEACAR 305
>gi|145630100|ref|ZP_01785882.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R3021]
gi|144984381|gb|EDJ91804.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R3021]
Length = 622
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/376 (10%), Positives = 112/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRI--ALLKLQK 67
++ + +V +S ++ + +NGEVI+ D ++R A +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFMGQSD 80
Query: 68 ING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNSVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q + +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEIFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--------------------------- 190
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISKNLQVTDIEIAQY 258
Query: 191 -KLQNQGFVQKRIKDAEES----------RLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ F+ +R+ + + L+ + + K S KI + G ++
Sbjct: 259 YQDNKAQFMTQRLAHIQFANEQDAKVVYEELQKGANFADVAKTKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|319650163|ref|ZP_08004311.1| post-translocation molecular chaperone [Bacillus sp. 2_A_57_CT2]
gi|317398145|gb|EFV78835.1| post-translocation molecular chaperone [Bacillus sp. 2_A_57_CT2]
Length = 298
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 70/246 (28%), Gaps = 31/246 (12%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG-IGDN 132
+ A+QELI E + +N + + G +F L + G +
Sbjct: 54 EQALQELIYEKVLSD-----KYEVTDEELNEKIDELKQQLG---ANFEMALMQYGYKDEE 105
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
++ + D ++ K E R +L
Sbjct: 106 DLRETFKTGLLQEKAAIKDIEATEKEVKEYYDNYK--------PEIKARHILV------- 150
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251
+K + + + K + G + + P+F+
Sbjct: 151 -EDEKTADEVKKKLDEGGKFEDLATEYSKDPGSA--ANGGDLGWFGPGKMVPEFEEAAYA 207
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
N + P ++ G I + +K++ E+ + + + +K + ++L
Sbjct: 208 LDVNEISAPVKSEHGFHIIQVTEKKEKKSFDEMKKEMEYQVKVSKLDGDKIQQAMDREL- 266
Query: 310 SNAIIH 315
A +
Sbjct: 267 KAADVD 272
>gi|319654014|ref|ZP_08008107.1| hypothetical protein HMPREF1013_04726 [Bacillus sp. 2_A_57_CT2]
gi|317394336|gb|EFV75081.1| hypothetical protein HMPREF1013_04726 [Bacillus sp. 2_A_57_CT2]
Length = 290
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 36/288 (12%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
KLL + + + S + + + I+ D+ + +++ GE
Sbjct: 3 KLLISLSTAGLLIGLSACSSSQASDNDEVIAETKAGNISSDDL-----YIAMKEKYGE-- 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDN 132
A+QEL+ +++ + + ++ + G +F + L + I +
Sbjct: 56 -QALQELL-----YKKVLEDKYKVEKEELDKKVKEIKDQAG---SNFEALLMQNNIKDEK 106
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
K+ L Q +V+ + + E+ + + K E R +L
Sbjct: 107 ELKEILKEQL----LVEKAAIQDIKVTDKELKESYENYK----PEIKARHILL------- 151
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
K IK+ + + K D G + + P+F+
Sbjct: 152 -EDEKTAKDIKNRLNDGEKFEDLAKEFSKDPGSAED--GGDLGWFGSGKMVPEFEEAAYA 208
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ N ++P TQ G I + +K++ ++ L Q +KI+
Sbjct: 209 LEVNKFSDPIKTQNGYHIIQVTEKKEKESFEYMRKELEYQLKVSKIDN 256
>gi|314934005|ref|ZP_07841370.1| foldase protein PrsA [Staphylococcus caprae C87]
gi|313654155|gb|EFS17912.1| foldase protein PrsA [Staphylococcus caprae C87]
Length = 333
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 29/227 (12%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L K +K D+ V+ + + G + F S L +QG+ + +K+
Sbjct: 64 LNKILADKYKDKVDTKDVDEDIKKEEKQYGGK-DQFESILKQQGMSLDDYKEQ------- 115
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF------- 197
L ++ + K KNI +L + +G
Sbjct: 116 -------KKLSAYQKQLLLDKVKVSDKNIKDNSKKASHILIKVKSKSSDKEGLSDKKAKE 168
Query: 198 -VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K K+ E++ + + K +S G Y+++ + F+ L K +
Sbjct: 169 KAEKIQKEVEKNPSKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVDSFEKALFKLKEG 226
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ T G I + D E K+ L + K++K
Sbjct: 227 QVSKVVKTDYGYHIIKADKENDFNKE---KSNLKEKIIEQKVQKKPK 270
>gi|294675776|ref|YP_003576391.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
capsulatus SB 1003]
gi|294474596|gb|ADE83984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodobacter
capsulatus SB 1003]
Length = 289
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 59/207 (28%), Gaps = 21/207 (10%)
Query: 117 AEDFSS--FLDKQGIGDNHFKQYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQK-- 169
+ L K G G + +A++ + D+ + ++ A
Sbjct: 76 LDQLIQQTALAKVGEGMMTRRDEIALEVERRAYLAGMLLDYTAERAVTPDKLKAAYDTKF 135
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
K REY ++ ++ + + + K + A+
Sbjct: 136 AKAEPSREYHAAHIIV-------ASEAEAKAIKAEIDGGADFATVAKAKSQDGAA----A 184
Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+ G + + + P F + P T+ G I + + R +A
Sbjct: 185 NGGDLGWFDLTAMVPPFAEAVAAMKAGEIKGPVQTEYGWHVIKLMESRLGAAPTLEEAT- 243
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + ++ + V + A +
Sbjct: 244 -EELSGDLRQQAVQDRVTDTVAKAKVE 269
>gi|27468439|ref|NP_765076.1| hypothetical protein SE1521 [Staphylococcus epidermidis ATCC 12228]
gi|46396902|sp|Q8CNR4|PRSA_STAES RecName: Full=Foldase protein prsA; Flags: Precursor
gi|27315986|gb|AAO05120.1|AE016749_66 prsA [Staphylococcus epidermidis ATCC 12228]
Length = 325
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 112/316 (35%), Gaps = 41/316 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ V + + + + S A S+ T I+ + D ++ + + ++I
Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESKDNTLISSKA-GDVKVADVMKKMGKEQIANTS 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
I + +++ + K + D+ ++ + + G + F S L +QG+ +
Sbjct: 60 FSIVLNKVLADKYKDK--------VDTKDIDKDIKKEEKQYGGK-DQFESMLKQQGMSFD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ + K + K + EI K+ K + +L +
Sbjct: 111 DYKEQKKL----SAYQKQLLLDKVNVSDKEI---KENSKKAS-------HILIKVKSKSS 156
Query: 193 QNQGF--------VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+G +K K+ E++ + + K +S G Y+++ +
Sbjct: 157 DKEGLSDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVD 214
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA- 302
F+ L K + + T G I + D E K+ + + K++K
Sbjct: 215 SFEKALFKLKEGEVSKVVKTDYGYHIIKADKETDFNSE---KSNIKQKLIEEKVQKKPKL 271
Query: 303 --EYVKKLRSNAIIHY 316
+ K+L + Y
Sbjct: 272 LTDAYKELLKEYKVDY 287
>gi|227358098|ref|ZP_03842440.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis ATCC
29906]
gi|227161833|gb|EEI46865.1| peptidyl-prolyl cis-trans isomerase D [Proteus mirabilis ATCC
29906]
Length = 625
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/349 (13%), Positives = 97/349 (27%), Gaps = 88/349 (25%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISK--RIALLKLQKINGE 71
+ +I + + SS + +NG I+ + + + +LQK G+
Sbjct: 13 FIKILLAVIILSFVLTGVGGYLFSSGVNDAAEVNGYKISRAQLEQAYQQRRAQLQKDMGD 72
Query: 72 --------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF------------ 105
+ + A+ LI + L Q ++ GI+ +
Sbjct: 73 NFASLASSDEGQKMIRQQALNVLINQALLDQFAQELGISAGDQQIRDAIFALPYFQTDGK 132
Query: 106 -----FVQHARNTGLSAEDFSSFLDKQGIGDN--------------HFKQYLAIQSIWPD 146
+V+ + A+ F+ + + I K + A +
Sbjct: 133 FDNKKYVELLTANNIDADAFAEGIRQNLINQQLRYSIQGTDFALESEVKDF-AGLMLQSR 191
Query: 147 VVKND------FMLKYGNLEMEIPA-----------------------NKQKMKNITVRE 177
V+ F+ K + E+ A ++ + NIT+ +
Sbjct: 192 NVRLASLDIQPFLEKETVSDEELKAFYDQNTSMFIAPAQVKVSYIQLEAQKDLSNITISD 251
Query: 178 ------YLIRTVLFSIPDNKLQNQGFVQKRIKDAEE-SRLRLPKDCNKLEKFAS--KIHD 228
Y F++P K + + E L+ D L K S
Sbjct: 252 DEVKAYYDSNISEFTVPGQKKYSLLVLADETAAKEAEDALKNGADFVTLVKEKSIDTFSA 311
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
G ++ P+ N + + P G + D +
Sbjct: 312 KQNGSLGWITIGQELPELANASLTEKGQISQPVKISNGYAIFRLDDMKP 360
>gi|313676103|ref|YP_004054099.1| ppic-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa
DSM 4126]
gi|312942801|gb|ADR21991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa
DSM 4126]
Length = 703
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 2/105 (1%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
TV +L D+ + +K ++ + + F+ G
Sbjct: 344 TVSSVKASHILIEAEDDSDEADAQARKEAREVLQKAQSGQDFAELAKDFSDGPSATRGGD 403
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ E + +F + K TQ G I + +++
Sbjct: 404 LGWFREGQMVDEFNEAVFAKSGTGVINEVIKTQYGYHIIKVTEEK 448
>gi|326559933|gb|EGE10332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 103P14B1]
gi|326573879|gb|EGE23831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 101P30B1]
Length = 342
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+R +L + P + + + ++K+ + +S R ++++ G+
Sbjct: 185 TLRHILLACPPQEGEERIELKKQARQLIDRLNQSHNRDSDFIEFACRYSACPSKDDGGEL 244
Query: 235 QYLLESDLHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQ 291
L + P+F++ + + NP T+ G+ I + K++ +AY +
Sbjct: 245 GVLQKGSTVPEFESAVFALPVGISINPIETRYGIHVIEVLQKQEGRQLSFEEAYPIIENH 304
Query: 292 NTPTKIEKHEAEYVKKLRSNAII 314
+Y+ +L A I
Sbjct: 305 LKQQSFHHSLCDYLFELSQKADI 327
>gi|229161287|ref|ZP_04289272.1| Foldase protein prsA 1 [Bacillus cereus R309803]
gi|228622101|gb|EEK78942.1| Foldase protein prsA 1 [Bacillus cereus R309803]
Length = 256
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 68/227 (29%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G ++F S L++ G+ ++ K+ + + + +
Sbjct: 41 KVSDEEAQKKVEEAKDKMG---DNFKSTLEQLGLKNEDELKEKMKPEIAFEKAI------ 91
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
K E ++ K E + +L K +K+ ++ +
Sbjct: 92 KETVTEKDV-------KENYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 132
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 133 DFAALAKQYSEDTGSKEQGGEIPGFAPGQTVKEFEEAAYKLDAGQVSEPIKTTYGYHIIK 192
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
DK++L +K + +++ ++ V L A I
Sbjct: 193 ATDKKELKPFDEVKGEIRKDLEEQRLQDTTGKWKQQVVTDLLKAADI 239
>gi|213418227|ref|ZP_03351293.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 86
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 236 YLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-T 293
+ P F++ L K + + P + G I + D R + A + + +
Sbjct: 1 WATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIELLDTRKVDKTDAAQKDRAYRMLM 60
Query: 294 PTKIEKHEAEYVKKLRSNA 312
K + A ++++ R++A
Sbjct: 61 NRKFSEEAATWMQEQRASA 79
>gi|295425340|ref|ZP_06818043.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus amylolyticus DSM
11664]
gi|295065116|gb|EFG56021.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus amylolyticus DSM
11664]
Length = 302
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 21/184 (11%)
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
E+ G S+ VN + + + G FS+ L + G+ + FKQ L +
Sbjct: 70 EQYGSKVSSSEVNKQYNNYKKQYG---SQFSAVLQQNGMTPSSFKQNLKTNLL------- 119
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+++ A ++K + ++ +L + QK IK+ + +
Sbjct: 120 -SEAALKDIKKVTKAQEKKAWKTYQPKVTVQHILV-------SKKSTAQKIIKELKAGKS 171
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVE 268
K + ++ A ++ L P F+ K T P +Q G
Sbjct: 172 -FASLAKKYSLDTATKNNAGKLPAFDSTDTTLDPSFKTAAFKLKTGEVTSTPVKSQSGYH 230
Query: 269 YIAI 272
I +
Sbjct: 231 VIKM 234
>gi|261210559|ref|ZP_05924852.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC341]
gi|260840344|gb|EEX66915.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC341]
Length = 619
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 12/147 (8%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FLDKQ 127
K + ++ + L +Q G+ V ++ + S F L +
Sbjct: 88 RKSVLDRMVNDLLLEQHAASLGLRVSDQQVRQMILEMPQ--FQSQGQFDQELYQAALRRA 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G + F +YL D+V+N M E +P + + IRT+ S+
Sbjct: 146 GFTPDMFAEYLR-----KDLVRNQLMSALQGSEFSLPGEVNLQDQLISQTRDIRTITLSL 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPK 214
D + + + + R +
Sbjct: 201 ADFAKKVTLSDDDIQQYYKANTERFTR 227
>gi|168701469|ref|ZP_02733746.1| hypothetical protein GobsU_18225 [Gemmata obscuriglobus UQM 2246]
Length = 329
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 88/306 (28%), Gaps = 29/306 (9%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEV-ITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
P + + TI G+V +T + L + EL+ ++++
Sbjct: 29 ASAGPTAPLPTGKAGAEPVATIFGDVAVTR---EQFADHLIRRYGPKELKGFVYRQIVST 85
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS-SFLDKQGIGDNHFKQYLAIQS 142
+ G+ + + A +S E L QG + + + + +
Sbjct: 86 VF-----ARQGLKLSPEEIQEQLDRTAAALKMSREQLGADILKSQGKTIDEWHEDVNVPI 140
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
I + E+ + + + + R I ++ + + +K
Sbjct: 141 IMLSRLAKAKAAPPTEAELRQAFDVRYGEKLDCR--------IIIWGDEKEARAAYEKVC 192
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP----QFQNLLKKSQNNTT 258
+E + + + D + HP K +
Sbjct: 193 SSEKEFDAHARRCTQAGQPRSGIATDGRGEPIPRAQPFEGHPAEQAAHAAAAKLRPGEVS 252
Query: 259 N--PYVTQKGVEYIAICDKRDLGGEIAL-----KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
P + +IA+ R + + KA L+ T K++K K++
Sbjct: 253 PLIPVEIEGERGFIALKCDRIIPADRTKSFEKEKAALADDVTGAKVDKEFRRLSKEIMKE 312
Query: 312 AIIHYY 317
A Y+
Sbjct: 313 AAPRYH 318
>gi|62179064|ref|YP_215481.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|62126697|gb|AAX64400.1| peptidyl prolyl isomerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 623
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|28209982|ref|NP_780926.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium tetani
E88]
gi|28202417|gb|AAO34863.1| putative peptidyl-prolyl cis-trans isomerase [Clostridium tetani
E88]
Length = 246
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 41/280 (14%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ NG ITDGD++ IA ++ + + L+ E +
Sbjct: 2 SKVLAVFNGRKITDGDLNNTIAQFPAERQQFFKTEEGRKNLLNEIISF------------ 49
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+A++ +D +L+K K+ IQ V + +
Sbjct: 50 ----ELIHDYAKDNKFDLDDL--YLEK----IEAIKKETLIQWTISKV-----LSEAEIK 94
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E +I KN+ + E + T + K + ++ +
Sbjct: 95 EEDIKEFYNNNKNMFIEEERVSTKHILVE----------TKEEAENIVDEIKNGLSFEEA 144
Query: 220 EKFASK-IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK-- 275
K S + G + +F+ + + +NP TQ G I + K
Sbjct: 145 AKEYSNCPSKGAGGDLGTFGRGRMVKEFEEAAFEMKEGTISNPVKTQFGYHIIKLEKKYA 204
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +K + Q K ++ + L++ +
Sbjct: 205 KGTKEYNEVKDLIKKQLHQEKERDLYKKFTEDLKNKYSVE 244
>gi|213582060|ref|ZP_03363886.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 405
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYTQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|158429497|pdb|2PV1|A Chain A, Crystallographic Structure Of Sura First Peptidyl-Prolyl
Isomerase Domain Complexed With Peptide Weyipnv
gi|158429499|pdb|2PV2|A Chain A, Crystallographic Structure Of Sura First Peptidyl-Prolyl
Isomerase Domain Complexed With Peptide Nftlkfwdifrk
gi|158429500|pdb|2PV2|B Chain B, Crystallographic Structure Of Sura First Peptidyl-Prolyl
Isomerase Domain Complexed With Peptide Nftlkfwdifrk
gi|158429501|pdb|2PV2|C Chain C, Crystallographic Structure Of Sura First Peptidyl-Prolyl
Isomerase Domain Complexed With Peptide Nftlkfwdifrk
gi|158429502|pdb|2PV2|D Chain D, Crystallographic Structure Of Sura First Peptidyl-Prolyl
Isomerase Domain Complexed With Peptide Nftlkfwdifrk
Length = 103
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 2/103 (1%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKA 234
E + +L +P+N +Q + A + R D KL S + G+
Sbjct: 1 TELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQM 60
Query: 235 QYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
+ +L F L + + P + G + + D R
Sbjct: 61 GWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLR 103
>gi|317403066|gb|EFV83601.1| peptidyl-prolyl cis-trans isomerase D [Achromobacter xylosoxidans
C54]
Length = 656
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 23/222 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKI 68
+++ + ++ F +V I Y+S+ T+ G+ I+ + D + R L + ++
Sbjct: 10 RWMQFILLLLIVPSFFLVGIQGYESFMRKEPELATVAGQPISRAEFDQAHRNQLEQYRQR 69
Query: 69 NG-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTG 114
G +L + + +LI + L + + T+ N
Sbjct: 70 LGAQFDPAVIDTPQLREALLNQLINQRLLANVAVDNRFSVSDETLRNTIAAIPEVQDNGR 129
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
S E + L QG+ F+ L D+ + G ++
Sbjct: 130 FSPERYRQVLAAQGMSPTSFEAGLR-----RDLAVARVLEPVGQSARAPAEVVASLETAL 184
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPK 214
++ ++ F+ D + Q DA + +L++P+
Sbjct: 185 TQQRTVQLRRFAAADFRSQVTVTPADIQAWYDANKQQLQVPE 226
>gi|238026979|ref|YP_002911210.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia glumae BGR1]
gi|237876173|gb|ACR28506.1| Peptidyl-prolyl cis-trans isomerase D [Burkholderia glumae BGR1]
Length = 647
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 72/218 (33%), Gaps = 25/218 (11%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V + ++ + S +++G IT + D + R + + ++ G E
Sbjct: 25 AFVGVQGFRDFFDDSANVASVDGRKITRAEFDSAYRQQIDQARQALGARYDAKVIDTPER 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
+ + +I + E+ + +T V + A + AE ++ L
Sbjct: 85 RQQLLDGMIEQRALADEVRRLHLTASDAAVREALLSNPIVAAMRKPDGSIDAERYTQLLA 144
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
QG+ + +++ + Q + N + + + + ++ ++ I+ ++
Sbjct: 145 MQGMTPDQYQESIRYQLTQQQLPSNLIDSAFTPKSV-----ARSLTDLAQQQREIQALVL 199
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
D + Q + + + ++
Sbjct: 200 KPADYAAKVQPTDAQISAYYDAHKQAFATPETATIQYL 237
>gi|301168101|emb|CBW27687.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus
SJ]
Length = 495
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 46/372 (12%), Positives = 104/372 (27%), Gaps = 64/372 (17%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRI 60
S++ ++ + T F+ +I Y+S S + E I +
Sbjct: 2 SEIESTPKKSSNIFVTIFIGLIVISFMFTGYQSLTTSPNSVAKVGDEFIKVEEYQREYNR 61
Query: 61 AL-----------LKLQKING-ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
L L Q+I +++ A+ L+ L +K G+ S + +
Sbjct: 62 QLEFFRNILGGKDLTTQQIQQFRIKETALSNLVQLKLTLILGDKVGVIPSSEEIKTEIKR 121
Query: 109 ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS-IWPD------------------ 146
N S + L + F++ + Q
Sbjct: 122 QPYFQVNGQFSINRYKDLLAANRMNPAQFEESIKDQVRGMNSDAIFTSMPISESYLKDVE 181
Query: 147 -VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++ E K + N + +YL + + + + ++
Sbjct: 182 NFRSQKIEANIIEIDKEALRKKLTISNDEITKYLADETNANRVQSLFNERKPTLDQKEEV 241
Query: 206 EESRLRLPKDCNKLEKFASKIH------------------------DVSIGKAQYLLESD 241
+ + D ++ I + G ++
Sbjct: 242 KARHILFKTDGKNDKQKLKAITTLRGKLTKSNFISQAKQHTEEEAGKSTGGDLRWFTRGA 301
Query: 242 LHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ P+F+ + + + P T G I + DK++ + A Q I K
Sbjct: 302 MVPEFEKVAFELKPGTISRPVKTPFGYHIIYVEDKKE--AKEATLEEFKNQLASELIRKT 359
Query: 301 EAEYVKKLRSNA 312
+ + V+ + + A
Sbjct: 360 KNDEVEAMATEA 371
>gi|73662267|ref|YP_301048.1| peptidyl-prolyl cis trans isomerase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494782|dbj|BAE18103.1| peptidyl-prolyl cis trans isomerase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 330
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 25/226 (11%)
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L K +K ++ ++ + + G + F S L +Q + +K+ +Q+
Sbjct: 63 MLNKLLADKYKDDVNTKDIDKEVEKEQKQYGGK-DQFESMLKQQKMSIGDYKEQKKLQAY 121
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK-RI 202
+++ K + EI N +K +L + +NK +G K
Sbjct: 122 QKELLN----DKVSMSDKEIKENTKKG----------SHILIKVKENKDDKEGLSDKEAK 167
Query: 203 KDAEESRLRLPKDCNKLEKFASK-----IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNN 256
AE+ + + K +K + A K G Y+++ + +F+ L K +
Sbjct: 168 AKAEKIQKEVEKHPDKFGEIAKKESMDKASAKKDGSLGYVVKGQMEDKFEKALFKLKEGK 227
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
++ T G I + D E K L AQ TKI+K
Sbjct: 228 VSDVVKTDYGYHIIKADKENDFDKE---KGKLKAQLIQTKIQKDPK 270
>gi|89095457|ref|ZP_01168368.1| peptidyl-prolyl cis-trans isomerase D, putative [Oceanospirillum
sp. MED92]
gi|89080287|gb|EAR59548.1| peptidyl-prolyl cis-trans isomerase D, putative [Oceanospirillum
sp. MED92]
Length = 627
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 54/157 (34%), Gaps = 16/157 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + I + + + F + + S S S T+NGE ++ ++ + +
Sbjct: 1 MLQSIRDNSQGIIAKIIVGLIAVTFALFGVESLVSLTGGSNAPATVNGEEVSQQELVQGM 60
Query: 61 ALLK---LQKINGEL----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
L + L ++ + ++ LI + + Q E G+ F ++ V
Sbjct: 61 RLQRNQMLSQMGENADPGLLNDNLISSMVLEGLIEQKVLVQSAENQGLVFTDAMIDQLIV 120
Query: 108 ---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ F + L G+ ++ + +
Sbjct: 121 STKDFQVDGKFDKVQFETVLRNAGLSPLSYRALVRKE 157
>gi|189461628|ref|ZP_03010413.1| hypothetical protein BACCOP_02287 [Bacteroides coprocola DSM 17136]
gi|189431658|gb|EDV00643.1| hypothetical protein BACCOP_02287 [Bacteroides coprocola DSM 17136]
Length = 457
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 90/275 (32%), Gaps = 16/275 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELE 73
++ ++ + + Y + + + E I D+ + A + + +G+
Sbjct: 6 FIKFYACMLLLLAGVSVYAQNNVIDEVVWVVGDEAILKSDVENERLNAQYENRHFDGDPY 65
Query: 74 KIAVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +EL ++ L + E + V A G S E + +K
Sbjct: 66 CVIPEELAIQKLYLHQAEIDSVMVSDQEVIQEVEQRIAWLADQIG-SKEKMEEYYNKSYT 124
Query: 130 GD-NHFKQYLAIQ---SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
++ + Q + D L + Q + ++ ++
Sbjct: 125 QIREMLRENVKSQKTVVQMQQKIVGDIKLTPAEVRNYFSKLPQDSIPFIPTQVEVQ-IIT 183
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLH 243
P + V+ ++++ + + + L +F S+ + G+ + +L
Sbjct: 184 QEPKISEEEIERVKSQLREYADRVNKGETSFSTLARFYSEDPGTARRGGEGGFTGRGELV 243
Query: 244 PQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
P+F N++ + + T+ G + +KR
Sbjct: 244 PEFANVVFNLTDTKKVSKVFETEFGYHIAQLIEKR 278
>gi|331270660|ref|YP_004397152.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum
BKT015925]
gi|329127210|gb|AEB77155.1| peptidil-prolyl cis-trans isomerase [Clostridium botulinum
BKT015925]
Length = 247
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 88/281 (31%), Gaps = 39/281 (13%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +++ ++NG+ IT+ DI I ++ + ++L+ + + + G
Sbjct: 1 MENKVLASVNGKEITEKDIEVAIKRFPQERQAYFAGEQGKKQLLEQLIAFELFHAYG--- 57
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
N + ++F G K+ Q V+ ++
Sbjct: 58 KENEFD------------KTQEFID-------GIEIMKKDALTQMSVNKVLS---EVQVT 95
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ E+E K + + +L DN+ +K
Sbjct: 96 DKEVEDYYTANKKNFVVGETVSAKHILV---DNEELANEVAEKIKNGMSFD--------E 144
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+++++ G + + P+F+ + P TQ G I + DK
Sbjct: 145 AAKEYSTCPSKAQGGNLGKFGKGQMVPEFEEAAFNLEIGKLSEPVKTQFGYHLIEVEDKN 204
Query: 277 DLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +K + A + +V++L++ +
Sbjct: 205 KATEKSFDEVKDMIKANLIQQRQTAKYTTFVEELKNKYNVE 245
>gi|113477056|ref|YP_723117.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Trichodesmium
erythraeum IMS101]
gi|110168104|gb|ABG52644.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Trichodesmium
erythraeum IMS101]
Length = 254
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 31/259 (11%)
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIE-KSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
LK + +G+L+ E++ + + ++E++ + I D + + L E F
Sbjct: 20 LKYLQASGKLQSFVT-EIVAQYVIEKELQSRKDIDVDQAIIQQAIIDFRLQRKLEDQEKF 78
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+L + GI N + + LK I + K L
Sbjct: 79 QEWLKQNGINYNALESQIVNSF-------RLKQLKDSITSERIEEYFNQRKAGLDSVILS 131
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLE 239
R V+ +K +K ++D L K S +D + G +
Sbjct: 132 RIVV----QDKELVDALYRKIVED--------GAKFEDLAKEYSVTNDKNFNGIMGVVSL 179
Query: 240 SDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+ L ++ + + + P+ T + + + + +
Sbjct: 180 ASLPEDLRDTINSANSGDILGPFKTNQFWSIFRLEQLQGASLDNP-------EIKKKLNS 232
Query: 299 KHEAEYVKKLRSNAIIHYY 317
+ ++ + N I +
Sbjct: 233 ELFERWITEQLQNKKITLH 251
>gi|319953958|ref|YP_004165225.1| ppic-type peptidyl-prolyl cis-trans isomerase [Cellulophaga
algicola DSM 14237]
gi|319422618|gb|ADV49727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cellulophaga
algicola DSM 14237]
Length = 485
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 95/286 (33%), Gaps = 22/286 (7%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITF 97
+ + +I + DI K + L+ Q ++ + + +L+ + L + + I
Sbjct: 63 DGVAAVVGDYLILESDIDKTLIDLRNQGVSADDVSRCSLLGKLMEDRLYAHQAVQDSILV 122
Query: 98 DSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ---YLAIQSIWPDVVKN 150
+ V + Q G S E SF K + F++ + + + ++
Sbjct: 123 ADDEVNATSDAQIQQLVTRVG-SMEKVLSFYKKT--DEESFREELYKINKLRMLSERMQR 179
Query: 151 DFMLKYGNLEMEIPANKQK----MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + E+ K + + E I ++ P + + V R+
Sbjct: 180 KIVEEIEITPEEVRQFFNKIPKDQRPVFGSELEIAQIV-KKPVAPEEEKQKVVDRLNRIR 238
Query: 207 ESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263
E L + S+ + G + ++ +F+++ + + P+ T
Sbjct: 239 EDILEKGSSFSIKAILNSEDPGSKQNGGYYKIDKQTGFVKEFKDVAFSLNVGEVSEPFET 298
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G I + LG E ++ L P + + + +R
Sbjct: 299 TFGYHIITVEKI--LGQEREIRHILMIPKVPQRALDASKQELDSIR 342
>gi|242374090|ref|ZP_04819664.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis
M23864:W1]
gi|242348215|gb|EES39817.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis
M23864:W1]
Length = 331
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 38/299 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ V + + + + S A S+ T I+ + D ++ + + ++I
Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESKDNTLISSKA-GDVKVADVMKKIGKEQIANTS 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
I + +++V+ K + ++ V+ + + G + F S L +QG+ +
Sbjct: 60 FNIVLNKILVDKYKDK--------VNTKDVDEDIKKEEKQYGGK-DQFESMLKQQGMSLD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ + K + K + EI K K + +L +
Sbjct: 111 DYKEQKKL----SAYQKQLLLDKVKVSDKEI---KDDSKKAS-------HILIKVKSKSS 156
Query: 193 QNQGF--------VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+G +K K+ E++ + + K +S G Y+++ +
Sbjct: 157 DKEGLSDKKAKEKAEKIQKEVEKNPSKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVD 214
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
F+ L K + + T G I + D E K+ L + K++K
Sbjct: 215 SFEKALFKLKEGQVSKVVKTDYGYHIIKADKETDFNKE---KSNLKEKIIEQKVQKKPK 270
>gi|49475012|ref|YP_033053.1| peptidyl-prolyl cis-trans isomerase [Bartonella henselae str.
Houston-1]
gi|49237817|emb|CAF27012.1| Peptidyl-prolyl cis-trans isomerase [Bartonella henselae str.
Houston-1]
Length = 317
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 68/239 (28%), Gaps = 45/239 (18%)
Query: 101 TVNYFFVQHARNTG--------LSAEDFSSFLDKQGIGDNH--------FKQYLAIQSIW 144
+N + + L + K+GI + + + Q +
Sbjct: 71 EINPGLARFSDEQRRITVLKAYLDMLALAKAAIKEGIDKSETYNKRMAVMRDNVLQQLYF 130
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
V + + + ++E K+ E R +L K+ +
Sbjct: 131 KQTV----VDQISDADLETLYKKEVAALPKEDEVKARHILVKT------------KKEAE 174
Query: 205 AEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PY 261
A RL + ++ K S G Y + F++ T P
Sbjct: 175 AIIKRLNKGESFEEIAKKNSTDGSAAVGGDLGYFSHGQMVKPFEDAAFGLKVGEYTKKPV 234
Query: 262 VTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ G I I D+R + ++ K L Q + + + + LR + Y
Sbjct: 235 ESPFGWHIIKIEDRRVKQPPVFDDV--KEMLRTQLIKERYQ----KLIADLRKKIDVKY 287
>gi|57867315|ref|YP_188945.1| protein export protein PrsA [Staphylococcus epidermidis RP62A]
gi|293366181|ref|ZP_06612867.1| foldase PrsA [Staphylococcus epidermidis M23864:W2(grey)]
gi|81674051|sp|Q5HN96|PRSA_STAEQ RecName: Full=Foldase protein prsA; Flags: Precursor
gi|57637973|gb|AAW54761.1| protein export protein PrsA, putative [Staphylococcus epidermidis
RP62A]
gi|291319703|gb|EFE60063.1| foldase PrsA [Staphylococcus epidermidis M23864:W2(grey)]
gi|329734300|gb|EGG70615.1| putative foldase protein PrsA [Staphylococcus epidermidis VCU045]
gi|329737249|gb|EGG73503.1| putative foldase protein PrsA [Staphylococcus epidermidis VCU028]
Length = 325
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 111/316 (35%), Gaps = 41/316 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ V + + + + S A S+ T I+ + D ++ + + ++I
Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESKDNTLISSKA-GDVKVADVMKKMGKEQIANTS 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
I + +++ + K + D+ ++ + + G + F S L +QG+ +
Sbjct: 60 FSIVLNKVLADKYKDK--------VDTKDIDKDIKKEEKQYGGK-DQFESMLKQQGMSLD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ + K + K + EI N +K +L +
Sbjct: 111 DYKEQKKL----SAYQKQLLLDKVNVSDKEIKENSKKT----------SHILIKVKSKSS 156
Query: 193 QNQGF--------VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+G +K K+ E++ + + K +S G Y+++ +
Sbjct: 157 DKEGLSDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVD 214
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA- 302
F+ L K + + T G I + D E K+ + + K++K
Sbjct: 215 SFEKALFKLKEGEVSKVVKTDYGYHIIKADKETDFNSE---KSNIKQKLIEEKVQKKPKL 271
Query: 303 --EYVKKLRSNAIIHY 316
+ K+L + Y
Sbjct: 272 LTDAYKELLKEYKVDY 287
>gi|226192799|pdb|3GPK|A Chain A, Crystal Structure Of Ppic-Type Peptidyl-Prolyl Cis-Trans
Isomerase Domain At 1.55a Resolution.
gi|226192800|pdb|3GPK|B Chain B, Crystal Structure Of Ppic-Type Peptidyl-Prolyl Cis-Trans
Isomerase Domain At 1.55a Resolution
Length = 112
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 172 NITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
++ EY I + + +NK Q +K ++ ++ +++
Sbjct: 2 SLGTEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQG----GSFVAYARQYSEASTAAV 57
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
G ++ + L + P + G + + DKR+
Sbjct: 58 GGDLGWIRLAQLPTELATTAASXGPGQLAGPVEIRGGFSILYLIDKRE 105
>gi|120554754|ref|YP_959105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter
aquaeolei VT8]
gi|120324603|gb|ABM18918.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinobacter
aquaeolei VT8]
Length = 617
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 58/165 (35%), Gaps = 15/165 (9%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------G 54
M + + I + ++I I + + T+NG+ IT+
Sbjct: 1 MLQDIRDNAQSTIAKVIVGLLIISLSIWGMDAIIGGFTGEPEVATVNGQDITEREFLRTV 60
Query: 55 DISKRIALLKLQKINGEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ + L++++ + L + + LI E + Q+ + G+ ++ Q
Sbjct: 61 QMESQQRLMQMENRDQSLLDEDQIRRDVLDALIREAVLTQDAQSQGLELTDADIDSLITQ 120
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + F + + G+G F++ + + +
Sbjct: 121 MPQFQVDGQFNRDRFVATVRNVGMGVAEFRESIRKNYVVNQIRAA 165
>gi|260581919|ref|ZP_05849715.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
NT127]
gi|260095112|gb|EEW79004.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
NT127]
Length = 622
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/376 (10%), Positives = 113/376 (30%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q + +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEIFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--------------------------- 190
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISKNLQVTDIEIAQY 258
Query: 191 -KLQNQGFVQKRIKDAEES----------RLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ F+ +R+ + + L+ + + K S KI + G ++
Sbjct: 259 YQDNKAQFMTQRLAHIQFANEQDAKVAYEELQKGANFADVAKTKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|152995753|ref|YP_001340588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp.
MWYL1]
gi|150836677|gb|ABR70653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp.
MWYL1]
Length = 607
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 40/317 (12%), Positives = 93/317 (29%), Gaps = 33/317 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----SKRIALLKL 65
+ + F+++ F + + + + SS ++G IT + ++R L+ +
Sbjct: 11 GIVVKIIVGFIVVTFALFGVDALVTSFNSSDTVAEVDGVDITRTQMLQGAETQRRQLISM 70
Query: 66 QKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTG 114
L++ A+ EL+ + + + G+ VN + Q N
Sbjct: 71 MGGQVNPALLEDNLLQRRALDELVQRVVLANQAKGLGLGVSDAQVNAYLLQAEQFQTNGQ 130
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ +F+ G FK+ + + E +P + +
Sbjct: 131 FDQNKYLNFIRSLGFTPLAFKERIKQDVLIQQPRNA-----IAGSEFVLPYQVDSVSKLQ 185
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+E V FS+ D + E ++ + I
Sbjct: 186 SQERTYDYVSFSLADESENTSVSDDELKAYYEANKENFKTPEQVKVNYV-VISSSDFYGK 244
Query: 235 QYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQN 292
+ +++L +Q + + + R + A K + A+
Sbjct: 245 VKITDAELQDAYQASISVLA------QEERSASHILIETSDR--SDDEAKKRLEEVEAKL 296
Query: 293 TP-TKIEKHEAEYVKKL 308
K A+Y +
Sbjct: 297 KAGAKFADLAAKYSDDI 313
>gi|118595140|ref|ZP_01552487.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales
bacterium HTCC2181]
gi|118440918|gb|EAV47545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylophilales
bacterium HTCC2181]
Length = 262
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 97/302 (32%), Gaps = 63/302 (20%)
Query: 27 IVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKL------QKINGELEKIAV 77
I+ + SS I ++N + I + +K Q+++ ++E+ V
Sbjct: 6 FYSILVLSALIHSSFINAEIASVNDKQIKSSYLE----FIKTEVSKQGQQVDKKMERTIV 61
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
LI + Q+ SG+ + V LS ++ L + + Y
Sbjct: 62 NRLIDLEVINQKARSSGLLSNERVV--------AQAELSNQELIYTL--------YLQDY 105
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ + + V + Q E+ +L
Sbjct: 106 IINNPVTEEEVATAYN--------------QYKAAFNESEFKASHILL------------ 139
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKS-Q 254
K + +L + L K S+ +D + G + + + + +K +
Sbjct: 140 TSKNKAELIIKKLDAGESFGVLAKKESEDNDTKNNNGDLGWFSKETMVQSIFDAVKNTGS 199
Query: 255 NNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNA 312
P TQ G I + D R L E + + T+++K + +++ LRS A
Sbjct: 200 GEIFPKPVKTQFGWHVIKVDDVRPLEVETFAQ---KEEFIKTELQKIKLKQHLSLLRSGA 256
Query: 313 II 314
I
Sbjct: 257 RI 258
>gi|56414392|ref|YP_151467.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197363312|ref|YP_002142949.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56128649|gb|AAV78155.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197094789|emb|CAR60322.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 623
Score = 49.3 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 79/236 (33%), Gaps = 19/236 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQ 127
L + + LI E L Q + + V F A + +++ +++
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ + + Q L Q ++ + + ++ + ++ ++R + +
Sbjct: 146 GMTADQYAQALRNQLTTQQLING-----VAGTDFMLKGETDELAALVSQQRVVREAVIDV 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ Q Q+ ++++ R + K+ ++ + ++D+ +
Sbjct: 201 NALAAKQQVTDQEVSSYYDQNKSRFMTP-EQFRVSYIKLDAATMQAL--VSDADIQAYYD 257
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
L T P T+ + I K + + L A ++ T ++ +
Sbjct: 258 QHLD----QFTQPERTRYSI----IQTKTEDDAKAVLDALNKGEDFATLAKEKSTD 305
>gi|77165248|ref|YP_343773.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani
ATCC 19707]
gi|254434944|ref|ZP_05048452.1| PPIC-type PPIASE domain protein [Nitrosococcus oceani AFC27]
gi|76883562|gb|ABA58243.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus oceani
ATCC 19707]
gi|207091277|gb|EDZ68548.1| PPIC-type PPIASE domain protein [Nitrosococcus oceani AFC27]
Length = 640
Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 44/365 (12%), Positives = 107/365 (29%), Gaps = 103/365 (28%)
Query: 40 SRIRTTINGEVITDGDIS-------KRIALLKLQKINGE------LEKIAVQELIVETLK 86
+ ++NGE I+ + +++ L E ++ ++ L+ + L
Sbjct: 39 EALAASVNGEEISTREFRSAFLSYTQQLRFLMGASFPEEMLDDPATKQNVIEGLVEQRLV 98
Query: 87 KQEIEKSGITFDSNTVNYF------------------FVQHARNTGLSA----------- 117
K G+ ++++ + + GL+
Sbjct: 99 LDTAAKLGLGMSDSSLSQVIRSNKAFQGESGQFDSQRYEAVLGSQGLTPVAYEARLRSAL 158
Query: 118 --EDFSSFLD------------------------KQGIGDNHFKQYLAI----------- 140
E S L + F+ + +
Sbjct: 159 LSEQLVSTLRLSAFTTQQEVEAIARLQQQKREIGYSIVPSATFRDVIEVSADKVRQYYDD 218
Query: 141 ---QSIWPDVVKNDF-MLKYGNLEMEIPANKQKMKNI---TVREYLI------RTVLFSI 187
+ P+ VK + L +L +IP ++Q +++ + +Y + +L ++
Sbjct: 219 HPEEFRIPEQVKVHYLRLTADSLATDIPLDEQTLRDFYEESEDQYRVPERRRASHILITV 278
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQ 245
P + + +A RL+ +D ++ K S + G + + P
Sbjct: 279 PPQGDEATRQQAQEKAEAVFERLQQGEDFEEVAKEVSDDPGSAQKGGDLGFFGRGVMDPA 338
Query: 246 FQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKR-------DLGGEIALKAYLSAQNTPTK 296
F+ + + + P +++ G I + D + E + Y
Sbjct: 339 FEEAVFSLEETGALSEPVLSKFGYHIIKLTDIEAGEVKPFEAVSEELAQRYRRQIAEEQF 398
Query: 297 IEKHE 301
E+ E
Sbjct: 399 YEQAE 403
>gi|282875776|ref|ZP_06284643.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis SK135]
gi|281294801|gb|EFA87328.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis SK135]
gi|329724902|gb|EGG61405.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis VCU144]
Length = 325
Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 112/316 (35%), Gaps = 41/316 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ V + + + + S A S+ T I+ + D ++ + + ++I
Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESKDNTLISSKA-GDVKVADVMKKMGKEQIANTS 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
I + +++ + K + D+ ++ + + G + F S L +QG+ +
Sbjct: 60 FSIVLNKVLADKYKDK--------VDTKDIDKDIKKEEKQYGGK-DQFESMLKQQGMSLD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ + K + K + EI K+ K + +L +
Sbjct: 111 DYKEQKKL----SAYQKQLLLDKVNVSDKEI---KENSKKAS-------HILIKVKSKSS 156
Query: 193 QNQGF--------VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+G +K K+ E++ + + K +S G Y+++ +
Sbjct: 157 DKEGLSDKKAKEKAEKIQKEVEKNPNKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVD 214
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA- 302
F+ L K + + T G I + D E K+ + + K++K
Sbjct: 215 SFEKALFKLKEGEVSKVVKTDYGYHIIKADKETDFNSE---KSNIKQKLIEEKVQKKPKL 271
Query: 303 --EYVKKLRSNAIIHY 316
+ K+L + Y
Sbjct: 272 LTDAYKELLKEYKVDY 287
>gi|239908536|ref|YP_002955278.1| peptidyl-prolyl cis-trans isomerase [Desulfovibrio magneticus RS-1]
gi|239798403|dbj|BAH77392.1| peptidyl-prolyl cis-trans isomerase [Desulfovibrio magneticus RS-1]
Length = 650
Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 91/283 (32%), Gaps = 48/283 (16%)
Query: 53 DGDISKRIALLKLQKINGELEKIAVQEL--IVETLKKQEIEKS----------GITFDSN 100
+ D +++ L KL G ++A E I + +++Q I K G+T
Sbjct: 149 EADFRQQLLLEKLAAFVGLPAQVAEAEARSIFDFMREQAIIKYIPFAATDFTKGVTISDE 208
Query: 101 TVNYFFV----QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ ++ + A + I F + +
Sbjct: 209 QIAKYYEARKDEFA-----TPAQVK-------IDFVEFTPKAMAK-----------PAEI 245
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++E + K + +R +L +P + Q ++ A +R KD
Sbjct: 246 TDTDIEADFKANQKKYERPEQVRVRHILMMLPPDAPQEVVDAAEKRLKAMADDVRKGKDF 305
Query: 217 NKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKK----SQNNTTNPYVTQKGVEYIA 271
L D IG +L + L +F +K ++ ++P T G+ I
Sbjct: 306 ATLIPKDPANADGIIGEDWAWLPKGSLPKEFAPFEEKAFTLKKDEVSDPVRTSLGLHLIQ 365
Query: 272 ICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
++ G+ AL K + A + + + ++
Sbjct: 366 -GGEKQASGQRALAEVKDEIRADLAEQRAADKLTKSLDAIQEK 407
Score = 36.6 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 79/283 (27%), Gaps = 45/283 (15%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIALLKLQKIN----- 69
+ F LII V + + T+NG+ I D + L+L K
Sbjct: 14 IKIVFGLIIIVFVFWGVGNFNGDRATVLATVNGQPILIKDYEKQYQENLRLVKNKNPNVT 73
Query: 70 ------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS- 122
G ++ L + + + GI + + + S + F +
Sbjct: 74 DKDLQDGGFRWQVFTNMVTTKLLEDQAKTLGIAVTAGELRSEIAKIPAFQNES-KQFDAK 132
Query: 123 ----FLDKQGIGDNHFKQYLAIQSIWPDV---------VKNDFMLKYGNLEMEIP----- 164
L + F+ Q + + V + E
Sbjct: 133 RYENLLKANDVSPGEFEADFRQQLLLEKLAAFVGLPAQVAEAEARSIFDFMREQAIIKYI 192
Query: 165 --ANKQKMKNITVRE------YLIRTVLFSIPDNKLQN--QGFVQKRIKDAEESRLRLPK 214
A K +T+ + Y R F+ P + + + K AE + +
Sbjct: 193 PFAATDFTKGVTISDEQIAKYYEARKDEFATPAQVKIDFVEFTPKAMAKPAEITDTDIEA 252
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNT 257
D +K + V + +L D Q ++ ++
Sbjct: 253 DFKANQKKYERPEQVRVRHILMMLPPDAP---QEVVDAAEKRL 292
>gi|307298526|ref|ZP_07578329.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306915691|gb|EFN46075.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 733
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 82/246 (33%), Gaps = 19/246 (7%)
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF--- 134
+ LI + ++G+ + V+ + E S+ + + G + F
Sbjct: 123 KSLIDQKTLLFYATENGVLPTAEQVDAETNRIVDEYVADEETKSAIIYQYG-SVDAFSEL 181
Query: 135 -KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ Y+ Q + +V + E + N + +K I + +L S + ++
Sbjct: 182 VRDYVVTQMLATNVTQKAIPDMEERFENYVNENMEDLK-INYEKVDANHILVSDEASAVE 240
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKK 252
+ + ++ + D + I+ ++G+ + +F++
Sbjct: 241 IKSMIDSGEISFTDAATQFSIDTDTA------INGGALGEFGR---GQMVQEFEDASFDA 291
Query: 253 SQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P +Q G I + K D E A + + + E+ +++ R
Sbjct: 292 TPGLVIGPVESQFGYHLIRVNSKTTFDTFEEFASTSAYQTELGRFENEEF-NKWIADYRQ 350
Query: 311 NAIIHY 316
+ Y
Sbjct: 351 QNNLSY 356
>gi|91793843|ref|YP_563494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
denitrificans OS217]
gi|91715845|gb|ABE55771.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella
denitrificans OS217]
Length = 625
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/202 (9%), Positives = 64/202 (31%), Gaps = 20/202 (9%)
Query: 17 TTYFVLIIFCIV-PIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE-- 71
VL+IF VS + +NG+ ++ ++ + + ++++ G+
Sbjct: 15 KGILVLVIFSFAFAGVSSYLGTSTDLPVAIVNGDEVSTSELEQAFQNERSRIEQQLGDMF 74
Query: 72 ------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLS 116
+++ +++L+ + L Q G+ + V +
Sbjct: 75 ETLAADDTYMAGIKQSVLEKLVGDKLIDQAAFALGLRVSDEQIKQAIVSEPAFQTDGVFD 134
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ + L + G FK + + ++ ++ + + + +R
Sbjct: 135 NSRYQAVLRQLGYQAVSFKNMMRVDMTRRQLLSALVGSEFALDGEAKQLAEVQGQTRDIR 194
Query: 177 EYLIRTVLFSIPDNKLQNQGFV 198
+ + F ++ +
Sbjct: 195 YLTVESNQFLADNSVTDEEAQA 216
>gi|329119300|ref|ZP_08247987.1| peptidyl-prolyl cis-trans isomerase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464647|gb|EGF10945.1| peptidyl-prolyl cis-trans isomerase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 603
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 43/386 (11%), Positives = 92/386 (23%), Gaps = 85/386 (22%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F ++ + LI V + A S + GE I+ ++ +
Sbjct: 1 MFATVEKYSGPAKIMLGLIALTFVGFGAGGIIATGSDYIVKVGGEKISTQNVQEAQR--- 57
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---------------- 108
+ N + A+ L + + GI + V
Sbjct: 58 --EQNLGSGQDALAYLTERAYLAEGAKMMGIGVSEAQLKQVIVDDPGFHDENGRFSEAKF 115
Query: 109 --HARNTGLSAEDFSSFLDKQ-------------------------------------GI 129
+ GL+ E F L +
Sbjct: 116 RLFLQQGGLTEERFLENLRNSFALQNLVNLAGGGNIVSSAQAEQYAALMLADREIRSIAL 175
Query: 130 GDNHFKQYLAIQSIW--------------PDVVKNDFML--------KYGNLEMEIPANK 167
F + P VK ++ E E+
Sbjct: 176 DPKTFAAQIKADDAALKAYYDKDKSKYRLPQAVKYQYIELSPRTLAESQKVGEDELKKAF 235
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI- 226
++ + + ++ + + + +K + +A+ + + + K + A
Sbjct: 236 EEQQKNAAPTREVAHIMLKTEGDAAKTKAEAEKILAEAKAAPEKFAELAAKYSQDAGTAQ 295
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
S+G L F+ + + + + + R K
Sbjct: 296 TGGSLGAVGKDSP--LPEAFKTAVSALGQGDIALVEGEGAFHIVRVGNVRSGLSFEEAKP 353
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A K + A+ LR A
Sbjct: 354 ALEAALKEKKAREAVAKTRDTLRQIA 379
>gi|296134356|ref|YP_003641603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola sp. JR]
gi|296032934|gb|ADG83702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermincola potens
JR]
Length = 183
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 19 YFVLIIFCIVPIVSY-KSWAMSSRIRTTINGEVITDGDISKRIALL---------KLQ-K 67
+ +L + +V IV + SS T+NG I+ + +K+ ++ KL K
Sbjct: 10 FALLGLIILVSIVVFLTKSNGSSDKVATVNGVSISKQEFNKQYKMILSYYETIARKLSDK 69
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARNTGLSAEDFSSFLDK 126
L++ + L+ + + QE +K I VN + Q N L +L +
Sbjct: 70 EKKGLQEEVLARLVDKAIILQEAQKRNIVVTDEEVNKYISQKFKGNKKLQ----DEYLKE 125
Query: 127 QGIGDNHFKQYLAIQ 141
+ + +K+ + Q
Sbjct: 126 RSLTLKDYKEVVRYQ 140
>gi|307729660|ref|YP_003906884.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
gi|307584195|gb|ADN57593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
Length = 646
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 81/257 (31%), Gaps = 26/257 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + ++ V I ++ + S ++NG IT + D + R L
Sbjct: 5 FRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRVEYDNAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ +++ G E + LI + + E ++ +T + V +
Sbjct: 65 RARQMLGAQFDIKAFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + E + L QG+ + + + + ++
Sbjct: 125 SSLKKPDGSIDVERYKQLLAMQGMTPDQYDERVRYSIATQEL-----PASIQGSAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAEQQREVQGIAFHPRDYAAKIQPTDAQLQAYYDAHRNDFATPATATIQYL-V 238
Query: 226 IHDVSIGKAQYLLESDL 242
+ ++ + E+DL
Sbjct: 239 MSPATLAASVQPSEADL 255
>gi|296327933|ref|ZP_06870468.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154889|gb|EFG95671.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 563
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 44/250 (17%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-NGEVITDGDISKRIALLKLQKING 70
FI +LT F+L + S A + N + I +I + A L +
Sbjct: 13 FIIILTVVFILSLAYGGYESYRTSRANKKAQEAMLLNKDYIQKIEIER--AKQDLSRTYS 70
Query: 71 ELEKI------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ A ++I + L + + S+ VN + + + G E F L
Sbjct: 71 DRVDKELVDILAFNDVIDKNLTLHIAKDLKVKVPSSEVNKQYEELESSMG-DKEQFRRML 129
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+G+ + K + + + +F + EI A Y+ L
Sbjct: 130 QVRGLTKDSLKNQIEENLLMQK-TREEFAKNINPNDEEIDA------------YMA---L 173
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+SIP +K ++ + K K E R + + + + DL P
Sbjct: 174 YSIPSDKREDAVNLYKTEKGTEAFR------------------EALLKARKEMKIKDLAP 215
Query: 245 QFQNLLKKSQ 254
+++NLL+K+
Sbjct: 216 EYENLLEKTA 225
>gi|295676521|ref|YP_003605045.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
gi|295436364|gb|ADG15534.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1002]
Length = 644
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 83/257 (32%), Gaps = 26/257 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + +L V I ++ + S ++NG IT + D + R +
Sbjct: 5 FRNHQRLMMFMLILVILPGLGFVGIQGFRGFFDESANVASVNGHKITRVEYDDAMRQQID 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ +++ G E + + +I + + E ++ +T + V +
Sbjct: 65 RGRQMLGAQFDMKAFDTPERRREMLDGMIEQRVLADETQRLHLTASDDAVRRALLSDPVI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + E + L QG+ + + + + +
Sbjct: 125 SSLKNPDGSIDLERYKQLLAMQGMTPDQYDERMRYNLAMQQL-----PASIAASAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
Q + + ++ ++ + F D + + Q + + R ++
Sbjct: 180 LAQHLSELAQQQREVQGIAFHPHDYEAKIQPTDAQLQAYYDAHRNDFATPATAAIQYV-V 238
Query: 226 IHDVSIGKAQYLLESDL 242
+ ++G + ++DL
Sbjct: 239 MSPATLGASVQPSDADL 255
>gi|110346927|ref|YP_665745.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mesorhizobium sp.
BNC1]
gi|110283038|gb|ABG61098.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chelativorans sp.
BNC1]
Length = 290
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 98/304 (32%), Gaps = 47/304 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD--ISKRIALLKLQKINGELEK 74
+ + I + ++ + A + + ++G+ IT D I++++ +L ++ + +
Sbjct: 12 SGILITTIVSLSLLLGSVAGAQDASVVGRVDGQDITADDLAIAEQMYSQQLGQMPEDARR 71
Query: 75 IAV-QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI + + K+ + D + S FL++
Sbjct: 72 SMLVDALIELRIVAEAARKANV-ADQEAYKRQLAFFEAQSLRSL-----FLEQ------- 118
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ ++ +++ K V E +R +L + ++
Sbjct: 119 -----------------RVAAAVTDEAVKAAYDERVGKIPPVLERRLRHILLRSESDAVE 161
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252
++ AE ++ R A ++ V G ++ E + P+ K
Sbjct: 162 VIEALKGGKAFAELAQERS----------ADEVSKVKGGDLGFVAEGQVVPEVDAAAAKL 211
Query: 253 SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T P + G + + + R+ ++ Q E + +LR+
Sbjct: 212 QPGEFTQSPVASAFGFHVVLVEETRNRP--PPAFEAVAPQIRQALEATEERRIISELRAA 269
Query: 312 AIIH 315
A +
Sbjct: 270 AKVE 273
>gi|251811182|ref|ZP_04825655.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|251805310|gb|EES57967.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus epidermidis
BCM-HMP0060]
Length = 322
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 32/239 (13%)
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+K D+ ++ + + G + F S L +QG+ + +K+ + K
Sbjct: 66 ADKYKDKVDTKDIDKDIKKEEKQYGGK-DQFESMLKQQGMSLDDYKEQKKL----SAYQK 120
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF--------VQKR 201
+ K + EI K+ K + +L + +G +K
Sbjct: 121 QLLLDKVNVSDKEI---KENSKKAS-------HILIKVKSKSSDKEGLSDKKAKEKAEKI 170
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNP 260
K+ E++ + + K +S G Y+++ + F+ L K + +
Sbjct: 171 QKEVEKNPNKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVDSFEKALFKLKEGEVSKV 228
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA---EYVKKLRSNAIIHY 316
T G I + D E K+ + + K++K + K+L + Y
Sbjct: 229 VKTDYGYHIIKADKETDFNSE---KSNIKQKLIEEKVQKKPKLLTDAYKELLKEYKVDY 284
>gi|325851850|ref|ZP_08171015.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A]
gi|327312553|ref|YP_004327990.1| PPIC-type PPIASE domain-containing protein [Prevotella denticola
F0289]
gi|325484692|gb|EGC87605.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A]
gi|326946030|gb|AEA21915.1| PPIC-type PPIASE domain protein [Prevotella denticola F0289]
Length = 480
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 87/271 (32%), Gaps = 28/271 (10%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQEL 80
VP + ++ + + + E I ++ ++KLQ +G+ E + +++
Sbjct: 41 TVPAATDRANNVVDEVIWVVGDEPILKSEVE----IMKLQGEAEGMKWDGDPECVLPEQI 96
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDF--SSFLDK-QGIGDNHFK 135
V+ L + I + + Q +S L++ Q +
Sbjct: 97 AVQKLFLHQAALDSIEVTESEIAQGIDQ---QINYWISLPQIGSKEKLEEFQHKSMAQIR 153
Query: 136 QYLAIQSIWPDVVKN---DFMLKYGNLEMEIPANKQKMKNITVREYLIR---TVLFSIPD 189
Q L +V+ + E+ +K+ ++ +L P
Sbjct: 154 QDLHDDYKNRQLVQKMQEKLVSDVKVSPAEVREYFRKLPVDSIPMIPTTVEVEILTQTPK 213
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
+ + ++ +++D + + L + S+ + G+ Y+ L P F
Sbjct: 214 VEPEEINRIKNQLRDYTDRITKGETSFATLARLYSEDPGSARQGGELGYMGRGMLDPAFA 273
Query: 248 NLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ ++ G I + D+R
Sbjct: 274 AAAFNLTDPKKVSKVVESEFGYHIIQLIDRR 304
>gi|206603474|gb|EDZ39954.1| Putative peptidyl-prolyl cis-trans isomerase [Leptospirillum sp.
Group II '5-way CG']
Length = 324
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 76/272 (27%), Gaps = 42/272 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + L + + ++S + + + + IT ++ + L ++
Sbjct: 16 LKTFIRFLFLSVLILFSNGCHRSEDRKTLVVGYLGKKAITVKNLEDTARFMGLGPVSRHR 75
Query: 73 ---------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
++E + + ++E +K GI N + + ++
Sbjct: 76 PLTEWTLSERNAVLRETVQDIFLEEEGKKRGIIIRPNEI--------------MDYLNNH 121
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+ F L + + Y
Sbjct: 122 FLQPDKSLETF---------------ARKALFLQKTAKALAPLPDISVSTERSFYKNHQN 166
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFAS-KIHDVSIGKAQYLLES 240
LF + + + V K+ ++AE R L KL K S + S G+ + +
Sbjct: 167 LFRVSRQAIVDHIVVAKQ-EEAESIRDALLKGSSFGKLAKLESLGMEASSGGRMKPYPQG 225
Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
+ P F + + + G +
Sbjct: 226 TMPPPFDTVFTMKPGEISPVLSSSYGYHLFRL 257
>gi|55980571|ref|YP_143868.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB8]
gi|55771984|dbj|BAD70425.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB8]
Length = 337
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 84/283 (29%), Gaps = 37/283 (13%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------GDISKRIAL 62
+ F + + + + + ++ + + E IT + R AL
Sbjct: 18 MRSFTRSMLAWGMRAFLLALTLLLVPMALAQGEVVAQVGPEAITREAFELRYGLFVRSAL 77
Query: 63 LKL--------QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+L + + ++ L E Q + G+ D V +
Sbjct: 78 AQLGLPDTEEARALLAAYRPAFLEALAREKALLQRAREEGLYPDPAAVEARVHAL-KEAF 136
Query: 115 LSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKN 172
E L + G+ G +++ +A + + + + + A +
Sbjct: 137 PEEEALEEALRQAGVPGLEAYRRLVAEAMALEAL-EARYRSRIAVSRAALKALWLLSPEY 195
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFASKIHDVS 230
Y R +L ++ EE+RLRL + ++ + S+
Sbjct: 196 RHPTLYCARHLLVPT--------------REEVEEARLRLARGEAFAEVARAVSQDPGSR 241
Query: 231 --IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
G E P F+ L++ + P T+ G I
Sbjct: 242 EEGGDLGCAPEGTYVPAFEEALVRLRPGEVSGPVRTEFGYHLI 284
>gi|126732888|ref|ZP_01748679.1| PPIC-type PPIASE domain protein [Sagittula stellata E-37]
gi|126706664|gb|EBA05738.1| PPIC-type PPIASE domain protein [Sagittula stellata E-37]
Length = 329
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 16/165 (9%)
Query: 153 MLKYGNLEMEIPANKQKM--KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + E E+ A Q+ +EY +L + + V+ A +R
Sbjct: 157 VAERAVTEDEVQAVYQRDFVDVDQGKEYNASHILLETKEAAEEVLAEVKGGADFATVARE 216
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
+ ++ + G + + FQ ++ + + T P TQ G
Sbjct: 217 K-----------STGPSGPNGGSLGWFGAGMMVEPFQVAVESLAPGDVTGPVETQFGWHV 265
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
I + + R E + A+ + E++ L I
Sbjct: 266 IKLNETR--TQEAPPLEAVRAEIVQKIQQDKVEEHIDSLMRQMDI 308
>gi|319401108|gb|EFV89327.1| PPIC-type PPIASE domain protein [Staphylococcus epidermidis FRI909]
Length = 326
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 112/316 (35%), Gaps = 41/316 (12%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+KL+ V + + + + S A S+ T I+ + D ++ + + ++I
Sbjct: 1 MKLMNKIIVPVTASALLLGACGSNATESKDNTLISSKA-GDVKVADVMKKMGKEQIANTS 59
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
I + +++ + K + D+ ++ + + G + F S L +QG+ +
Sbjct: 60 FSIVLNKILADKYKDK--------VDTKDIDKDIKKEEKQYGGK-DQFESMLKQQGMSLD 110
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+K+ + K + K + EI K+ K + +L +
Sbjct: 111 DYKEQKKL----SAYQKQLLLDKVNVSDKEI---KENSKKAS-------HILIKVKSKSS 156
Query: 193 QNQGF--------VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+G +K K+ E++ + + K +S G Y+++ +
Sbjct: 157 DKEGLSDKKAKEKAEKIQKEVEKNPNKFREIAKKESMDSSSAK--KDGSLGYVIKGQMVD 214
Query: 245 QFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA- 302
F+ L K + + T G I + D E K+ + + K++K
Sbjct: 215 SFEKALFKLKEGEVSKVVKTDYGYHIIKADKETDFNSE---KSNIKQKLIEEKVQKKPKL 271
Query: 303 --EYVKKLRSNAIIHY 316
+ K+L + Y
Sbjct: 272 LTDAYKELLKEYKVDY 287
>gi|282859615|ref|ZP_06268718.1| PPIC-type PPIASE domain protein [Prevotella bivia JCVIHMP010]
gi|282587618|gb|EFB92820.1| PPIC-type PPIASE domain protein [Prevotella bivia JCVIHMP010]
Length = 486
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 16/252 (6%)
Query: 40 SRIRTTINGEVIT--DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + E I + +I+K + K +G+ E + +++ V+ L + I+
Sbjct: 60 DEVIWVVGDEPILLSEVEITKLQGEAEGMKWDGDPEYLVPEQIAVQKLFLHQAALDSISV 119
Query: 98 DSNTVNYFFVQHARNTGLSAEDFS---SFLDKQGIGDNHFKQYLAIQSIWPDVVKN---D 151
+ + Q N +S + Q +Q L +V+
Sbjct: 120 SESEIAQGVEQ-QINYWISLPQIGSKEKLEEYQRKSVAQIRQDLHDDYKNRQLVQKMQEQ 178
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ E+ A +K+ ++ R + + + V + + R
Sbjct: 179 LVSDLKVSPAEVRAYFKKLPADSIPTIPTRVEVEILTQTPKIEKEEVSRIKNQLRDYTDR 238
Query: 212 LP---KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ-NLLKKS-QNNTTNPYVTQ 264
+ L + S+ + G+ ++ + L P F + + ++
Sbjct: 239 VNKGETSFETLARLYSEDPGSARQGGELGFIGRAALDPAFAGAAFNLTDPKKLSKIVESE 298
Query: 265 KGVEYIAICDKR 276
G I + DKR
Sbjct: 299 FGYHIIQLIDKR 310
>gi|237756262|ref|ZP_04584821.1| hypothetical protein SULYE_0873 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691581|gb|EEP60630.1| hypothetical protein SULYE_0873 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 460
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 13/155 (8%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
M K+ S I L T F + IV I+ YK + + +NG+ I +
Sbjct: 1 MFDKISQSKWKNIVLFITVFAFVATSIVAIIVYKLSGEINGV-AEVNGKEIPFYEFNYAY 59
Query: 57 ---SKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
++ + + L + + +++K V +LI + L QE EK GIT S V ++ +
Sbjct: 60 EMTARNMQMQNLDISNLKDQIKKEVVNDLIEKELLYQEAEKEGITATSEQVKNEILKISA 119
Query: 112 ---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
N + + ++ G+ + F+ L +
Sbjct: 120 FQVNGKFDKQIYLQIINSFGLTPDAFENILKKELS 154
Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIR----TVLFSIPDNKLQNQG 196
DV N + E + K K ++ EY I L SIP +++N+
Sbjct: 266 GDVFSNQEIQNLPKEVQEDANSLNKDKKVSFTKAQNEYYISLFNGESLKSIPYEQVKNE- 324
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFAS-------KIHDVSIGKAQYLLESDLHPQFQNL 249
QK ++ + L+ + + + I D +I + L
Sbjct: 325 IKQKLERELSQKALQDMQKTTDITQLLKQNKTEKQTISDNTIQELVVKFGIK-REDLNKL 383
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ P T+ G+ + + ++ + K L K YV
Sbjct: 384 ANLKVGEISKPISTENGILIFKLTEIKEPDKSQVDETKKTILPF-IKSQKFNDVYQMYVD 442
Query: 307 KLRSNAII 314
LR A I
Sbjct: 443 SLRKKAKI 450
>gi|325107411|ref|YP_004268479.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
gi|324967679|gb|ADY58457.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
Length = 423
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 94/306 (30%), Gaps = 24/306 (7%)
Query: 34 KSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGELEKIAVQEL-------IV 82
+ S + +NG + GD+ ++++ ++ Q + + + L I
Sbjct: 99 SPVILDSTVVAVVNGNTVLAGDVFAPYARQMVKMREQLTDEQYLAAQRELLKRDLPGHIE 158
Query: 83 ETLKKQE----IEKSGITFDSNTVNYFFVQHARNTGLSAE-----DFSSFLDKQGIGDNH 133
TL +++ I ++ F +H + E + L +G
Sbjct: 159 RTLLSHALKSTLKQEQIDKLDGVLDQAFAEHVEKLLVKTETSSALELDKKLQSEGTSLAD 218
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+Q Q + + + + +++ ++ + ++ + Q
Sbjct: 219 IRQTFGTQQLAMQYLATESQVNVQLGRVDLLNYYRENLDRFSHPTRVKWQEIRVSITPQQ 278
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH--PQFQNLLK 251
++ ++ + + + +++ G + E L + L
Sbjct: 279 DRRAAVMKLNEVVKKLQEGVAFPDVAREYSDGPTASQGGNWDWTKEDSLADVELNKELFS 338
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLR 309
+ T K I + ++ D K L + K + AE ++KL
Sbjct: 339 LPTGAISRIIETDKYFRIIRVVEREDAHVTPFEKLQDGLREEIRSKKRHEKTAEVLRKLN 398
Query: 310 SNAIIH 315
A+I
Sbjct: 399 ETAVIQ 404
>gi|145632388|ref|ZP_01788123.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae 3655]
gi|144987295|gb|EDJ93825.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae 3655]
Length = 622
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/376 (10%), Positives = 113/376 (30%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITLSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEARAQREGEAFMAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNSVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q + +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEIFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN--------------------------- 190
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISKNLQVTDIEIAQY 258
Query: 191 -KLQNQGFVQKRIKDAEES----------RLRLPKDCNKLEKFAS--KIHDVSIGKAQYL 237
+ F+ +R+ + + L+ + + K S KI + G ++
Sbjct: 259 YQDNKAQFMTQRLAHIQFANEQDAKVVYEELQKGANFADVAKTKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NANELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIVDLVRKSLI 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|262404271|ref|ZP_06080826.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC586]
gi|262349303|gb|EEY98441.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio sp. RC586]
Length = 619
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 12/147 (8%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS-----FLDKQ 127
K + ++ + L +Q G+ V + + S F L +
Sbjct: 88 RKSVLDRMVNDLLLEQHAASLGLRVSDQQVRQMILDMPQ--FQSQGQFDQELYQAALRRA 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G + F +YL D+V+N M E +P + + IRT+ S+
Sbjct: 146 GFTPDMFAEYLR-----KDLVRNQLMSALQGSEFSLPGEVNLQDQLISQTRDIRTITLSL 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPK 214
D + + + + R +
Sbjct: 201 ADFAKKVTLSDDDIQQYYKANTERFTR 227
>gi|222095920|ref|YP_002529977.1| peptidylprolyl isomerase [Bacillus cereus Q1]
gi|221239978|gb|ACM12688.1| protein export protein prsa [Bacillus cereus Q1]
Length = 283
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G ++F S L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKQVEEAKDKMG---DNFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 121 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEIAGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK----LRSNAII 314
+ DK++L +K + +++ ++ ++ L +A I
Sbjct: 220 VTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNGLLKDADI 266
>gi|327398937|ref|YP_004339806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hippea maritima DSM
10411]
gi|327181566|gb|AEA33747.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hippea maritima DSM
10411]
Length = 631
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 19/237 (8%)
Query: 57 SKRIALLKLQK-INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
K +ALLK + E L ++ LKK+ + + V FF ++ L
Sbjct: 138 EKYLALLKANNINPKDYEDSLKTALYIDKLKKRLFKD--VKVSDKDVKSFFDKNYSKINL 195
Query: 116 S-----AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML--------KYGNLEME 162
F S + N F Q P +VK ++++ K + E
Sbjct: 196 DFVSFDISSFKSKVKVDDEKLNKFYQKHKSDYRIPTMVKFEYIVVPLSYVKKKIKVTDNE 255
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A K+ I+ I Q ++K+ D + + K
Sbjct: 256 TEAFYNAHKDYFKVPLRIKVAHILISSKDNQTDSKLRKKADDVYKLLEDKKISFKEAAKK 315
Query: 223 ASK--IHDVSIGKAQYLLES-DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S G+ Y+ + + + N++K + + P+ T+ G + D +
Sbjct: 316 YSSDDYTRNVGGELGYVTKDMVIDEFWNNIIKLKRGEISKPFKTKFGYHIALVEDIK 372
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFL 124
+++ A+ L+ L Q+ +K GI + V N S E + + L
Sbjct: 85 KKLNIKQKAIDILVERALLLQQAKKEGIKVSNEDVLRAIESNKAFYYNGKFSKEKYLALL 144
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
I ++ L + K + ++
Sbjct: 145 KANNINPKDYEDSLKTALYIDKL-KKRLFKDVKVSDKDV 182
>gi|306845597|ref|ZP_07478166.1| Chaperone surA precursor [Brucella sp. BO1]
gi|306273918|gb|EFM55745.1| Chaperone surA precursor [Brucella sp. BO1]
Length = 311
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 19/210 (9%)
Query: 120 FSSFLDKQGIGDNHFKQY---------LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ GI H K ++ + V + E + +
Sbjct: 93 LLQRAREIGIEPEHEKDAEGRDETDEDALVRMVIEREVD---VPSASRDEAQRYYENNRH 149
Query: 171 KNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ +L + P ++ Q + A + +++S
Sbjct: 150 RFTNAPILEASHILIAADPADQEARDAARQTATRLAAAVIAEPATFASVALEYSSCPSGA 209
Query: 230 SIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALK-- 285
G L P+F+ L++ + TT P ++ G + + D+R G E+
Sbjct: 210 QGGNLGQLTRGSTVPEFERALERMTPGETTANPIESRFGFHIVRL-DRRVEGEELPFDYV 268
Query: 286 -AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ + K ++Y+ L + A I
Sbjct: 269 ADKIAGWLEASTWSKAVSQYIAILAAEAEI 298
>gi|229190397|ref|ZP_04317398.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
gi|228593181|gb|EEK50999.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
Length = 293
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 33/205 (16%)
Query: 118 EDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
E+F S L++ G+ ++ K+ + + + + +K + ++ K+
Sbjct: 97 ENFKSTLEQLGLKNEDELKEKMKPEIAFEEAIKA------TVTDKDV-------KDNYKP 143
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKA 234
E + +L K IK+ ++ +D L K S+ G+
Sbjct: 144 EMKVSHILVK--------DEKTAKEIKE----KVNNGEDFAALAKQYSEDTGSKEQGGEI 191
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+F+ K + P T G I + DK++L +K +
Sbjct: 192 SGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIE 251
Query: 294 PTKIEKHEAEY----VKKLRSNAII 314
+++ ++ V L +A I
Sbjct: 252 QQRLQDTTGKWKQQVVNDLLKDADI 276
>gi|291287880|ref|YP_003504696.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio
acetiphilus DSM 12809]
gi|290885040|gb|ADD68740.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Denitrovibrio
acetiphilus DSM 12809]
Length = 633
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 22/180 (12%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIV----SYKSWAMSSRIRTTINGEVITDGDI---- 56
+ +SL + KL+T +I V + S ++G ITD +
Sbjct: 1 MISSLRNKKKLITFSLWFVIAAFVGTIFFVWGVGDKVQSQLYAAKVDGVTITDQEFRDKV 60
Query: 57 -SKRIALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ R +L N + LEK ++ LI ETL + E + I V
Sbjct: 61 ENTRNQFRQLFGNNIDEILKGDTLEKTVMETLITETLLRNEANRLNIPASDAEVAANIQS 120
Query: 109 H-ARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQSI---WPDVVKNDFMLKYGNLEME 162
A T + + L + + F+ + D+++ + +E E
Sbjct: 121 VQAFQTDGQFDQQLYVQLLSRNRLTPQIFESSIRRDITLKKIEDLIRQSVAVSDQEVEQE 180
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 75/246 (30%), Gaps = 32/246 (13%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELI--VETLKKQE-IEKSGITFDSNTVNYFF-- 106
TDG +++ + L + L + I TLKK E + + + V F
Sbjct: 126 TDGQFDQQLYVQLLSRNR--LTPQIFESSIRRDITLKKIEDLIRQSVAVSDQEVEQEFIY 183
Query: 107 --------------VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW----PDVV 148
N ++ ++F D+ ++ + P+
Sbjct: 184 QNTVATIRYLELGADNFIGNVEITDNALTAFFDEH---KEQYRVPEKADFKYVTFDPETY 240
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
K +F+ +E NK +LF + + + +
Sbjct: 241 KGEFITSDKEIENYFIQNKASFNEPE--RVRAAHILFRVENWDDEKAATEIYQKAKKVRK 298
Query: 209 RLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
+ D K+ + S+ + G+ + + P+F+N + ++ TQ G
Sbjct: 299 EIVDGADFAKMAEKYSEDSTAQNGGELGFFTRGQMVPEFENAAFTTNPGEVSDVVKTQFG 358
Query: 267 VEYIAI 272
I +
Sbjct: 359 FHIINV 364
>gi|223043514|ref|ZP_03613559.1| foldase protein PrsA [Staphylococcus capitis SK14]
gi|222443002|gb|EEE49102.1| foldase protein PrsA [Staphylococcus capitis SK14]
Length = 333
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 29/227 (12%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L K +K D+ V+ + + G + F S L +QG+ + +K+
Sbjct: 64 LNKILADKYKDKVDTKDVDEDIKKEEKQYGGK-DQFESMLKQQGMSLDDYKEQ------- 115
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF------- 197
+ L +++ K K + +L + +G
Sbjct: 116 KKLSAYQKQLLLDKVKVSDKGIKDNSKKAS-------HILIKVKSKSSDKEGLSDKKAKE 168
Query: 198 -VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQN 255
+K K+ E++ + + K +S G Y+++ + F+ L K +
Sbjct: 169 KAEKIQKEVEKNPSKFGEIAKKESMDSSSAK--KDGSLGYVIKGQMVDSFEKALFKLKEG 226
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ T G I + D E K+ L + K++K
Sbjct: 227 QVSKVVKTDYGYHIIKADKENDFNKE---KSNLKEKIIEQKVQKKPK 270
>gi|199599418|ref|ZP_03212812.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus rhamnosus
HN001]
gi|199589671|gb|EDY97783.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus rhamnosus
HN001]
Length = 300
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 86/277 (31%), Gaps = 33/277 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ + V+ SS + G +T + + + ++ +I
Sbjct: 5 ILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMK-------KTTTGQATLRNMI- 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
LK E ++ VN F + + G S F S L++ G ++ FK +
Sbjct: 57 -VLKALE-QQYPNKVSDKKVNSQFNKLKKQYGSS---FDSTLEQNGYTESSFKDQIRTTL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMK--NITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +M+ P KQ + ++ +L D Q QK
Sbjct: 112 ----------YSEVALKDMKKPTTKQIESQWKKYQPKIQVQHILVKTEDEAKQIISDYQK 161
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
+ L + K + L+S LKK+ + TT P
Sbjct: 162 DPTEKNFESLAKKNSIDNGTK-NKGGKLAAFDNTDTSLDSTFKSAAFK-LKKAGDITTTP 219
Query: 261 YVTQKGVEYIAICDK------RDLGGEIALKAYLSAQ 291
TQ G I + ++ ++ + Y S Q
Sbjct: 220 VKTQYGYHVIRVISIAKKGTMKEHKKDLEKQIYTSWQ 256
>gi|269138352|ref|YP_003295052.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Edwardsiella
tarda EIB202]
gi|267984012|gb|ACY83841.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Edwardsiella
tarda EIB202]
gi|304558384|gb|ADM41048.1| Peptidyl-prolyl cis-trans isomerase PpiD [Edwardsiella tarda
FL6-60]
Length = 626
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 37/314 (11%), Positives = 99/314 (31%), Gaps = 39/314 (12%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQ 66
L + L+ FVL I +A ++G+ I + + + +LQ
Sbjct: 14 LKVILALIIISFVLTGVGNYLIGGSGDYA------AKVDGQEIGRAQLEQAVQNERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ G+ L K + +I + L Q +K + V
Sbjct: 68 QQLGDQFSVLAGNEGYMKELRKQVLSRMIDDVLLDQYAQKLNLAISDAQVKEAIRAMPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
+ + + + G+ + + Q + Q + +++ F L E+ A
Sbjct: 128 QTDNHFDNAKYLDMVARLGLSPDAYAQLMRQQLVTQQLIQG-FTATGFTLPAEVDA---- 182
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ +T+++ + I Q Q + ++ + ++ ++
Sbjct: 183 LAALTMQQRQVSLATIDISKLMPQQQVSDAELQGYYQQHQSSFIAPEAVKVRYI-EMDAA 241
Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+I + ++++ + + + + T P + V I K + + +
Sbjct: 242 AINDKMTVSDAEISAYY----DQHKGSFTQPARSDYSV----IQVKTEAEAKAIAAQLAN 293
Query: 290 AQNTPTKIEKHEAE 303
+ T ++ +
Sbjct: 294 GADFATLAKEKSTD 307
>gi|30995417|ref|NP_439165.2| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae Rd
KW20]
gi|3183576|sp|P44092|PPID_HAEIN RecName: Full=Peptidyl-prolyl cis-trans isomerase D; Short=PPIase
D; AltName: Full=Rotamase D
Length = 622
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 43/396 (10%), Positives = 114/396 (28%), Gaps = 95/396 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R + + + L + V +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLA 139
N + + + L+++ ++S L + G+ ++ F +
Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVP 178
Query: 140 IQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD-------- 189
Q V + + A + + Y F P+
Sbjct: 179 AQVKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYID 238
Query: 190 -----------------------NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKF 222
NK Q I+ A E ++ +
Sbjct: 239 LSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADV 298
Query: 223 ASK-----IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
A I + G ++ E++L F++ Q + P + + +++
Sbjct: 299 AKAKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK 358
Query: 277 DLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
++ K+ + ++ + + + +
Sbjct: 359 AQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|254470940|ref|ZP_05084343.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudovibrio sp.
JE062]
gi|211960082|gb|EEA95279.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudovibrio sp.
JE062]
Length = 295
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 88/279 (31%), Gaps = 41/279 (14%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
+NG I++ DI + G+ + A + L+V L Q+ I
Sbjct: 36 VVVNGVQISEQDILAEAQ-NHPAENPGQAVQAAARALVVRELLLQQARALNIIAAPEQHE 94
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF-MLKYGNLEME 162
E+ + ++++ + + E
Sbjct: 95 DGSE---------TEE---------------------DAAIRELIEQEVDIPSASQDECL 124
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD-AEESRLRLPKDCNKLEK 221
K + + Y +LF+ ++L + + R D + + + + +
Sbjct: 125 RYYENNKSRFSSEPIYEASHILFAAGPDQLTARSIAKARAHDVIKLLQDKPETFADLAME 184
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICDKRDLG 279
+++ + G L + P+F+ L+ Q + P T+ G I + R +
Sbjct: 185 YSACPSKETGGNLGQLTKGSTVPEFEVALQSMQAGQLSEHPIETKFGYHIIFL--NRKID 242
Query: 280 GEIA----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
G ++ + A K ++Y+ L +A I
Sbjct: 243 GNTLPFEHVEETIRAWLEAASWSKAVSQYITILAGSAEI 281
>gi|170717232|ref|YP_001784350.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus
2336]
gi|168825361|gb|ACA30732.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haemophilus somnus
2336]
Length = 618
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 35/356 (9%), Positives = 98/356 (27%), Gaps = 81/356 (22%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR- 59
+ K+ + S + + + + F + + Y + + +NGE I+ ++
Sbjct: 2 LMEKLNNASSGIVSKIIFGLIGVSFVLSGVAGYMFIRTDTSV-AKVNGEEISQQVFLQQY 60
Query: 60 ------------IALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
++ + L + LI + L +Q ++ + V+
Sbjct: 61 NNEYQRLSENLGAKFAEVADSAAKHLRHEVLDRLINQELLRQYAQELKLGISDKQVSLAI 120
Query: 107 VQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------- 150
V + + L GI + + Y+ + + +
Sbjct: 121 VNSPMFQNEGKFDNKIYQQILASSGISSDTYAAYVREGLVLEQLQQGIANSDFQVPIQLN 180
Query: 151 --------DFMLKYGNLEMEIPANKQKMKNITVRE-YLIRTVLFSIPDNK-----LQNQG 196
++ L ++ KQ + + + Y F++P+ +
Sbjct: 181 ELAKNFFQRRDVRLAVLSLDDEMQKQTVTEQEIEQYYQANKANFAVPERVKVQYLDLTRA 240
Query: 197 FVQKRIKDAEESRLRLPK---------------------------------DCNKLEKFA 223
+++K ++ + + D + L K
Sbjct: 241 IADQKVKISDIEIAQYYQDNKAQYITKHLAHIQLPTEQEAQSVYANLQNGEDFSALAKLY 300
Query: 224 S--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
S + G +++ + F++ + + P I + D +
Sbjct: 301 SMDTLSAQKGGDLDWVVNGMMPLAFESAVTLLNVGEYSQPVKVDNAYHIIKVLDMK 356
>gi|220905632|ref|YP_002480944.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869931|gb|ACL50266.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 639
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 39 SSRIRTTINGEVIT--DGDISKRIA----------LLKLQKINGELEKIAVQELIVETLK 86
S + +NG+ I+ + +++ R A L + Q +L + +++LI + L
Sbjct: 38 SGTLVAVVNGDPISMREFELAYRNAEENLLRSNPGLTREQLKQQQLGRQILRDLITQVLL 97
Query: 87 KQEIEKSGITFDSNTVNYFFVQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
QE ++G++ + E ++ L Q + F+Q ++
Sbjct: 98 SQEAARTGVSITPLELRMAVGNIKGFQNEKGQFDPEVYTRVLAAQRMAPAQFEQDMSRDL 157
Query: 143 IWPDV 147
+ +
Sbjct: 158 LRQKI 162
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 73/228 (32%), Gaps = 18/228 (7%)
Query: 91 EKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW--- 144
++ + V+Y F A + S E+ ++ + F +
Sbjct: 179 KRFEFLREKRDVDYIFIPASDFAASVKPSDEEVQAYYESH---KAQFAIPARADVAYVLV 235
Query: 145 --PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
D+VK + + + + E +L + ++ + +
Sbjct: 236 SPQDLVKASGISSAAAEKWYADNAARFEQQ---EEVKAAHILVPLAEDASEADVKKAQEQ 292
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260
A E+ L+ K + + + G+ +L F++ + + P
Sbjct: 293 AAAIEAELKAGKSFAAVADAHNGPNAAGPGGELGWLKRGTTVKPFEDAAFALAPGKVSAP 352
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+Q G+ I + +K+D G + + A+ ++ A+ + +
Sbjct: 353 VRSQFGLHIIKVEEKKD--GGLPPFKQVEAEVLAAMAQEQGADKLHDV 398
>gi|84514873|ref|ZP_01002236.1| PPIC-type PPIASE domain protein [Loktanella vestfoldensis SKA53]
gi|84511032|gb|EAQ07486.1| PPIC-type PPIASE domain protein [Loktanella vestfoldensis SKA53]
Length = 270
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/172 (9%), Positives = 50/172 (29%), Gaps = 14/172 (8%)
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
V+ + ++ + E+ +L + D + +
Sbjct: 93 AQVIDDITQTSINQELLQEAYQDRFADAPETPEFRAAHLLVATEDEANAAKAQLDA---- 148
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVT 263
+ ++ + + G + + +F+ ++ + ++P+ T
Sbjct: 149 -------GEAFADVAAAVSTDVTSANGGDLGWFGAGAMVEEFETAVMALEIDEISDPFET 201
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
Q G + + D+R + Q + E Y+ +L + +
Sbjct: 202 QFGWHIVTLTDQRARPAPTFEQVV--QQLSAELQEAAVIAYLDELSAATTVE 251
>gi|160902059|ref|YP_001567640.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis
SJ95]
gi|160359703|gb|ABX31317.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis
SJ95]
Length = 667
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 68/218 (31%), Gaps = 22/218 (10%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF----VQHARNTGLSAEDFSSFLDK 126
L+ V L E + + E+S + + VN Q+ ++++ L
Sbjct: 102 SLDNQVVDLLFDEKIVRYYAEQSDLLPSNEEVNNQINTQVDQYITQYKFDETNWNNMLQY 161
Query: 127 QG-------IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
G I + +Q + I V + + I N + +KN E
Sbjct: 162 YGSEQNIRNILISGLQQTVETDLINNAVKDAVASVSREDALAYIEQNFESIKN-DYEEVR 220
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
++ +L ++ + + + + + G+ ++
Sbjct: 221 VQHILL-------SDEATANSIKEMIATGEITFEDAASLYS--LDTSNATNSGEIGWIKH 271
Query: 240 SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
+ F++ + Q P T +G I + DK+
Sbjct: 272 GNYEQSFEDAVFNGQVGEIIGPVQTSEGFHLIRVLDKK 309
>gi|187478461|ref|YP_786485.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N]
gi|115423047|emb|CAJ49578.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N]
Length = 648
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 23/222 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD--GDISKRIALLKLQKI 68
+++ + V+ F IV + Y S+ + I G+ IT D + R L + ++
Sbjct: 10 RWMQFILLVLVVPSFAIVGVQGYSSFVNTEVELANIGGQGITQPQFDAAHRNQLEQFRQR 69
Query: 69 NGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTG 114
G L + + +LI + L + + T+ + +
Sbjct: 70 MGSQFDPAVIDTPALREQLLNQLIDQRLLLMVAADNRFSVSDETLRNTIAAIPQVQDDGR 129
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
S E + L QG+ F+ L D+ + G ++
Sbjct: 130 FSPERYRQVLAAQGLSPTSFENGLR-----RDLAVARVLEPIGLSARVPQEVVNNVEQAL 184
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIK--DAEESRLRLPK 214
++ I+ F D + + Q DA + LR+P+
Sbjct: 185 TQKRTIQLRSFLAADYRSKVNVSPQDIQAWYDANKESLRIPE 226
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 57/176 (32%), Gaps = 6/176 (3%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + Q + D ++ + ++ + K + T + +L P +
Sbjct: 226 EQVQAQYLVLDEAAATQGVQVKDEDIASYYEQNKNRFGTPEQRRASHILIEAPASGEARD 285
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQNLLK-K 252
K A E+ P +L K S+ G ++ + + P Q +
Sbjct: 286 KARAKAEAIAREAAAN-PASFAELAKKDSQDAGSAARGGDLGWIAANSVPPSVQQAIDGL 344
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
++ + + G I + D + +I A + Q T ++ + ++
Sbjct: 345 PKDGVSGVVESPFGFHIIKVTDIKP--AQIKPLAEVKEQITNEIRKQLASARFAEM 398
>gi|315127185|ref|YP_004069188.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (rotamase D)
[Pseudoalteromonas sp. SM9913]
gi|315015699|gb|ADT69037.1| peptidyl-prolyl cis-trans isomerase D (PPIase D) (rotamase D)
[Pseudoalteromonas sp. SM9913]
Length = 633
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 65/199 (32%), Gaps = 21/199 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M K+ + + V++ F + I SY + +NG I+ + S+
Sbjct: 1 MLEKIREGSQGPVAKVILGAVILSFALAGIGSYLGQTTEQPV-AEVNGIKISQTEFSRAF 59
Query: 59 ---RIA--------LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R ++ ++ + + L+ + L+ Q + G+ ++
Sbjct: 60 QNERSRLEQQFGEYFTQIAADPTYMAQIRQGVIDRLVQQELQSQLATELGLRVSDESIRQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ + + + + + + F++YL +V L+
Sbjct: 120 TILELPYFKIGDQFNNDRYLQVIRQMNFQPDSFREYLRDDMTRSQLVSA-VAGTDFALQN 178
Query: 162 EIPANKQKMKNITVREYLI 180
E+ + + +YL+
Sbjct: 179 ELKSAIALQQQTRSIDYLV 197
>gi|110677781|ref|YP_680788.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Roseobacter denitrificans OCh 114]
gi|109453897|gb|ABG30102.1| PPIC-type PPIASE domain protein [Roseobacter denitrificans OCh 114]
Length = 285
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 82/269 (30%), Gaps = 52/269 (19%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVI-TDGDISKRIALLKLQKINGEL 72
+ + L P+V+ A + + T+NGE I I+ R L
Sbjct: 6 RILAFSALTAAIAAPVVAQDDTALTADTVIATVNGEDIKLGHMIAARATL------GERY 59
Query: 73 EKIAVQEL---IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++ ++L IVE L +Q GI A E I
Sbjct: 60 NQMPAEQLWNGIVEQLIQQTALAQGIESL-----SAGEAMALENQ---ERSLKAAKAIEI 111
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
G Q++ + ++ + ++GNL+ E E+ +L + +
Sbjct: 112 GLE--------QAVTEEDIQAAYDAEFGNLDPEE-------------EFNASHILVATEE 150
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QN 248
+ + A + + ++ + G+ + + P F
Sbjct: 151 EAI---AVKEAIDGGANFA--------ATAREKSTGPSGPNGGELGWFSTGMMVPSFEAA 199
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ ++P TQ G I + D R
Sbjct: 200 TIALEVGEVSDPVETQFGWHVITLNDTRQ 228
>gi|300311549|ref|YP_003775641.1| peptidyl-prolyl cis-trans isomerase D [Herbaspirillum seropedicae
SmR1]
gi|300074334|gb|ADJ63733.1| peptidyl-prolyl cis-trans isomerase D protein [Herbaspirillum
seropedicae SmR1]
Length = 639
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 10/204 (4%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+A LS E + DK +Q + + + + +I A
Sbjct: 198 DSYASQVKLSDEMLKDYYDKNSARFETPEQ---ADIEYVVLDAAAVAAQAAVTDDDIKAY 254
Query: 167 KQKMKNITVREYL--IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PKDCNKLEKFA 223
++ K + E +L ++ + K + ++LR P + KL K
Sbjct: 255 YEQNKKLYATEEQRRASHILIAVKKDASAADQAAAKSKAEGLVAQLRKNPGEFAKLAKAN 314
Query: 224 SKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S+ + G Y + + F++ Q ++P + G I + +
Sbjct: 315 SQDPGSAENGGDLGYFGKGAMVKPFEDAAFSLKQGEISDPVQSDFGYHIIEVTGIKPAAV 374
Query: 281 EIALKAYLSAQNTPTKIEKHEAEY 304
L++ + + K + +Y
Sbjct: 375 -KPLESVKAEIGSEIKKQIAAKKY 397
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 51/157 (32%), Gaps = 18/157 (11%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKL 65
+ ++ L F+ F + Y + + + G+ IT + D + R L ++
Sbjct: 7 THQRLMQFLLLLFIFPSFAFFGLEGYSRLTDDNGV-AKVAGQTITKEEWDAAHRQQLERM 65
Query: 66 QKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH----A 110
+++ G + + LI + E+ S + + +Q
Sbjct: 66 RQVYGNQFDSKIFDSPQARRAILDNLIAQRALGAEVVASKLVVPDQVLQQSILQIPGLTK 125
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ E + L QG+ ++ L + +
Sbjct: 126 ADGKFDNEQYRVLLAAQGMTPKSYEAGLRREMAVQQL 162
>gi|212696251|ref|ZP_03304379.1| hypothetical protein ANHYDRO_00787 [Anaerococcus hydrogenalis DSM
7454]
gi|212676880|gb|EEB36487.1| hypothetical protein ANHYDRO_00787 [Anaerococcus hydrogenalis DSM
7454]
Length = 248
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 80/234 (34%), Gaps = 42/234 (17%)
Query: 41 RIRTTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
I +NG+ I+ D+ ++ + ++Q L + ++ E L QE+ I
Sbjct: 7 EILAEVNGKKISQKDV---VSFITQMQGGQQFLNPQGIHQIADE-LVNQEL--MYIDAIE 60
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
N ++ + L+ E N K Y A+ ++ D+ + L
Sbjct: 61 NKLDQD-KEFTDQVKLTKE-------------NMLKNY-AMHLLFKDI-----KVSDDEL 100
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ NK+ +K Y +L ++ K +++ ++ + K
Sbjct: 101 KEYYDNNKEVIKQPKT--YKASHILV-------DSEDEANKILEE-----IKAGLEFEKA 146
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAI 272
S G + + +F+ L K + +NP +Q G I +
Sbjct: 147 ADKYSTDKASKGGDLGEFPQGAMVKEFEEALDKLDEGEISNPVKSQFGYHIIKL 200
>gi|300715595|ref|YP_003740398.1| peptidyl-prolyl cis-trans isomerase D [Erwinia billingiae Eb661]
gi|299061431|emb|CAX58543.1| Peptidyl-prolyl cis-trans isomerase D [Erwinia billingiae Eb661]
Length = 623
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 86/280 (30%), Gaps = 35/280 (12%)
Query: 43 RTTINGEVITDGDIS-----KRIA--------LLKLQKING---ELEKIAVQELIVETLK 86
+NG+ I+ + +R +L ++ + A+ +L+ E+L
Sbjct: 42 AAKVNGQEISRAQLENAFSNERSRQQQQLGEQFSQLAGNPAYIQQIRQQALSQLVDESLL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ G+ + + N + +++ G + + + L Q
Sbjct: 102 TGYAKDLGLAISDDQIKQAIFNQSAFQTNGKFDNTKYLGLINQMGFTADQYAEALRKQLT 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ N + + + + +E L+R ++ + ++
Sbjct: 162 TQQLIAA-----VTNTDFMLTGETDALAALVSQERLVREATINVAALAAKQTVSAEEIKN 216
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
E+++ + A + E+ Q+ + Q + T P +
Sbjct: 217 YYEQNKNNFMSPEQFRVSYIKL-------DAASMQETASEADIQSWYDQHQADYTQPQRS 269
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + I K + + AL A + ++ A+
Sbjct: 270 RYSI----IQTKTEAEAQSALDAMKKGGDFAALAKEKSAD 305
>gi|260580093|ref|ZP_05847923.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae RdAW]
gi|260093377|gb|EEW77310.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae RdAW]
Length = 622
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 43/396 (10%), Positives = 114/396 (28%), Gaps = 95/396 (23%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R + + + L + V +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLA 139
N + + + L+++ ++S L + G+ ++ F +
Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVP 178
Query: 140 IQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD-------- 189
Q V + + A + + Y F P+
Sbjct: 179 AQVKNSAEVFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYID 238
Query: 190 -----------------------NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKF 222
NK Q I+ A E ++ +
Sbjct: 239 LSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADV 298
Query: 223 ASK-----IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
A I + G ++ E++L F++ Q + P + + +++
Sbjct: 299 AKAKSLDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERK 358
Query: 277 DLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
++ K+ + ++ + + + +
Sbjct: 359 AQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|16077140|ref|NP_387953.1| protein secretion PrsA [Bacillus subtilis subsp. subtilis str. 168]
gi|221307882|ref|ZP_03589729.1| hypothetical protein Bsubs1_00365 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312204|ref|ZP_03594009.1| hypothetical protein BsubsN3_00365 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317137|ref|ZP_03598431.1| hypothetical protein BsubsJ_00365 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321400|ref|ZP_03602694.1| hypothetical protein BsubsS_00365 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|586895|sp|P37566|YACD_BACSU RecName: Full=Uncharacterized protein yacD
gi|467461|dbj|BAA05307.1| unknown [Bacillus subtilis]
gi|2632339|emb|CAB11848.1| putative protein secretion PrsA homolog [Bacillus subtilis subsp.
subtilis str. 168]
Length = 297
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 48/318 (15%), Positives = 108/318 (33%), Gaps = 40/318 (12%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQ 66
S I + +L+ V KS A +S TI G+ +T + L+
Sbjct: 3 SRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREE--------WLK 54
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + K ++++I + +Q +K+ + + V+ F+ SF +
Sbjct: 55 EMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNN-------SFYED 107
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + +K + + D++ D + N E+E NK K Y IR ++
Sbjct: 108 EHTTEKEWKDQIRYNILLEDLLTRD--IDISNKELESFYNKNKELYQFDDSYRIRHIVVK 165
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHP 244
++ ++ +K+ + + E+ + G ++ E+ +
Sbjct: 166 -------DEEEAREVLKE---LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPS 215
Query: 245 QFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEK 299
+ K ++ + P G I + +K R + +K
Sbjct: 216 AYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDK 275
Query: 300 HEAEYVKKLRSNAIIHYY 317
VK L A + ++
Sbjct: 276 AT---VKTLWKEADVSWF 290
>gi|74317550|ref|YP_315290.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus
denitrificans ATCC 25259]
gi|74057045|gb|AAZ97485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus
denitrificans ATCC 25259]
Length = 274
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 88/282 (31%), Gaps = 51/282 (18%)
Query: 40 SRIRTTINGEVI--TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
S+ T+NG+ I G++ KR + + Q + EL+ + LI L + G+
Sbjct: 38 SKPLATVNGKEIPALYGELVKR-EMAQGQPDSPELDARVRESLINLELLSRAATDKGLDK 96
Query: 98 DSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
D + A + + + + + Y+
Sbjct: 97 DP--------RLAAALDIRRKDQLAKA---------YLEDYIKAH--------------- 124
Query: 157 GNLEMEIPANKQKMKN-ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+ A K K EY R +L S + + K E ++ KD
Sbjct: 125 PVTDAEVQAAYDKAKAGPIEPEYRARHILVSTEAEAKKVIADLGK-KAKFETLAKKMSKD 183
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAIC 273
+ + G + P+F L + TT P TQ G I +
Sbjct: 184 PGSAK---------NGGALDWADRRAFVPEFSEALASLKKGETTQTPVKTQFGYHVIRLD 234
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
D R + + + ++ + V R+NA +
Sbjct: 235 DTRQPK--LPELNAVRDEIVKQLQQQRVRDAVTAARANAKVE 274
>gi|260596813|ref|YP_003209384.1| periplasmic folding chaperone [Cronobacter turicensis z3032]
gi|260215990|emb|CBA28646.1| Peptidyl-prolyl cis-trans isomerase D [Cronobacter turicensis
z3032]
Length = 645
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 94/333 (28%), Gaps = 90/333 (27%)
Query: 43 RTTINGEVITDGDIS-----------KRI--ALLKLQKIN---GELEKIAVQELIVETLK 86
+N + I+ + +R+ +L EL + A+Q LI E L
Sbjct: 62 AAKVNDQEISRAQLENAVNIERNNLERRMGDRFSELASNEQYMAELRQRALQGLIDEALI 121
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + V + + +++ + G+ + + Q L Q
Sbjct: 122 DQYARSLHLEISDEQVRQSIFKNPAFQSDGKFDNARYNAIITSMGMSADQYAQALRNQLT 181
Query: 144 WPDVVKN---------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
+V + + ++ A KQ++ +++Y +
Sbjct: 182 TDQLVSAVMGSDFILPGESDQFAALFAQQRQARTATIVVDALAEKQQVSEQEIKDYYQQH 241
Query: 183 V-------LFSIPDNKLQNQGFVQ-----------------------------KRIKDAE 206
F + KL + + +AE
Sbjct: 242 ANNFQSPEQFRVSYIKLDAAALAENASEDEIQAYYDKHQDEFGQPERNRYSLIQTKTEAE 301
Query: 207 E----SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
++L+ D L K S I + G +L +F+N K + ++
Sbjct: 302 AKAILAQLKQGADFATLAKEKSVDVITARNGGDMGWLEPGTTPDEFKNAGLKDKGQLSDV 361
Query: 261 YVTQKGVEYIAICDKR--------DLGGEIALK 285
+ G + + D ++ +I+ K
Sbjct: 362 IKSSVGFLIVRLDDTTPAKVKPLSEVHDDISAK 394
>gi|91783524|ref|YP_558730.1| putative PpiC-type peptidyl-prolyl cis- trans isomerase
[Burkholderia xenovorans LB400]
gi|91687478|gb|ABE30678.1| Putative PpiC-type peptidyl-prolyl cis- trans isomerase
[Burkholderia xenovorans LB400]
Length = 645
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 72/238 (30%), Gaps = 25/238 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + ++ V I ++ + S ++NG IT + D + R L
Sbjct: 5 FRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ +++ G E + LI + + E ++ +T + V +
Sbjct: 65 RARQMLGAQFDMKSFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + + + L QG+ + + + + +
Sbjct: 125 SSLKNPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQL-----PASIQGSAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAEQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQYL 237
>gi|116619875|ref|YP_822031.1| hypothetical protein Acid_0747 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223037|gb|ABJ81746.1| hypothetical protein Acid_0747 [Candidatus Solibacter usitatus
Ellin6076]
Length = 214
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 6/152 (3%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI-----NGELEK 74
++ C + + RI ++ VIT D+ + I + Q + +K
Sbjct: 1 MLIKALCTGLLAMAVRGEIIDRIAVSVGTRVITQSDLDRAIRVAAFQDGVKLDFSAARKK 60
Query: 75 IAVQELIVETLKKQEIEKSGIT-FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
Q LI + L + E+E S D ++ Q + + + L GI +
Sbjct: 61 AVAQALIEQKLVQIELESSRYPLPDPAEISPAIEQFKKEHFKDDAAYRAALAAYGITEQD 120
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
F+ L Q V+ F E E+ A
Sbjct: 121 FRDMLLWQRTLLLFVQMRFETGAPVTESEVQA 152
>gi|296157831|ref|ZP_06840665.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
Ch1-1]
gi|295892077|gb|EFG71861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
Ch1-1]
Length = 645
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 72/238 (30%), Gaps = 25/238 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + ++ V I ++ + S ++NG IT + D + R L
Sbjct: 5 FRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ +++ G E + LI + + E ++ +T + V +
Sbjct: 65 RARQMLGAQFDMKSFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + + + L QG+ + + + + +
Sbjct: 125 SSLKNPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQL-----PASIQGSAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAEQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQYL 237
>gi|254302830|ref|ZP_04970188.1| peptidylprolyl isomerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323022|gb|EDK88272.1| peptidylprolyl isomerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 563
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 87/250 (34%), Gaps = 44/250 (17%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTI-NGEVITDGDISKRIALLKLQKING 70
FI +LT F+L + S A + N + I DI + A +L +
Sbjct: 13 FIIILTVVFILSLAYGGYESYRTSRANKKAQEAMLLNKDYIQKIDIER--AKQELSRSYA 70
Query: 71 ELEKI------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
E A E+I + L + + S+ VN + + + G E F L
Sbjct: 71 ERVDKDIVDILAFNEVIDKNLTLHIAKDLKVKVPSSEVNKQYEELESSMG-DKEQFRRML 129
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+G+ + K + + + +F + EI Y+ L
Sbjct: 130 QVRGLTKDSLKNQIEENLLIQK-TREEFSKNINPTDEEINT------------YMA---L 173
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
+SIP +K + + K K AE R + + + + DL P
Sbjct: 174 YSIPADKKEEAINLYKSEKGAEAFR------------------EALLKARKEMQIKDLAP 215
Query: 245 QFQNLLKKSQ 254
+++NLL+K+
Sbjct: 216 EYENLLEKTA 225
>gi|254480567|ref|ZP_05093814.1| SurA N-terminal domain family protein [marine gamma proteobacterium
HTCC2148]
gi|214039150|gb|EEB79810.1| SurA N-terminal domain family protein [marine gamma proteobacterium
HTCC2148]
Length = 626
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 22/195 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKLQK 67
+ + +++ F I S S + +NGE IT ++ + + L+ +
Sbjct: 13 LAKIIVGIIVVAFAGFGIESILLGGGGSAV-AEVNGEEITPQELQQAVNNQKRQLISMMG 71
Query: 68 INGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLS 116
N + L + A+Q LI L Q + G+T V Q + S
Sbjct: 72 ENLDPAMLDDQLLSQQAMQTLISRKLLVQSADDMGLTVSDTQVGALIGSMEQFQLDGQFS 131
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
E + + L + G FK L V E P + I
Sbjct: 132 PELYRARLGEAGFTPLLFKTTLTDDIKVGQV-----RSGLAGSEFATPGELELNARIVGE 186
Query: 177 EYLIRTVLFSIPDNK 191
+ +R + + +
Sbjct: 187 QRDLRYITIPLETHA 201
Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 65/206 (31%), Gaps = 11/206 (5%)
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
HA +S + + F A++ + ++ + F +
Sbjct: 197 LETHASEAVISDPQIQQYYAD---NSDSFLSEEAVELDYIELRSDSFREAVEEQMIVDAY 253
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
++ + E + +LF ++ Q+R+ DA+ ++ +
Sbjct: 254 EQEIANSQYQTENRVSHILFE--QGGDESDSSYQERLSDAQSRLAAGEAFAAVAQELSDD 311
Query: 226 I-HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
I S G + + + + + + N + P VT G I + ++R GE
Sbjct: 312 IGSASSGGDLGFTSGDAFPAEMEEAIAELELNGISAPVVTDAGTHIILLTERR--SGEAP 369
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKLR 309
L A + V+ LR
Sbjct: 370 PLEELRAGL--EEQLAMSEARVELLR 393
>gi|332529107|ref|ZP_08405071.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis
ATCC 19624]
gi|332041330|gb|EGI77692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Hylemonella gracilis
ATCC 19624]
Length = 647
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 22/165 (13%)
Query: 5 VFTSLSDFIKLLTTYFVLII---FCIVPIVSYKSWAMSSRIRTTINGEVITDG--DISKR 59
+F +L K+L VL+I F +V I Y R+ + IT G D + R
Sbjct: 1 MFENLRKHNKILMAVLVLLIVPSFVLVGIDGYTRMTQKDRVVAHVGKIEITQGEWDAAHR 60
Query: 60 IALLKLQKINGEL----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
+L+++ L + ++ +I E + +Q + + +
Sbjct: 61 SETDRLRQMMPNLDARLLDSDAARRGVLERMIRERVLQQAALDAQLNVSDARLFQELQTI 120
Query: 110 A-------RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ E + + L +QG+ F+ L +
Sbjct: 121 PAISQLRNAQGKIDMEAYQALLARQGMSPAGFEAQLRADLAVNQI 165
>gi|238911417|ref|ZP_04655254.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
Length = 623
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 80/290 (27%), Gaps = 76/290 (26%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + +V +++ +++ A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDEL-AALVSQQRVVREAVIDVNALA 204
Query: 166 NKQKMKNITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAEES---------------- 208
KQ + + V Y V F P+ + + A S
Sbjct: 205 AKQLVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFT 264
Query: 209 ---RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLH 243
R+R K E A + D + G +L ES
Sbjct: 265 QPERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATV 324
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
P+ +N K + + + G + D + ++ +IA K
Sbjct: 325 PELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|313143878|ref|ZP_07806071.1| cell binding factor 2 [Helicobacter cinaedi CCUG 18818]
gi|313128909|gb|EFR46526.1| cell binding factor 2 [Helicobacter cinaedi CCUG 18818]
Length = 296
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 85/296 (28%), Gaps = 42/296 (14%)
Query: 30 IVSYKSWAMSSRIRTTINGEV-ITDGDIS---KRIALLKLQKINGELEKIAVQELIVETL 85
+S ++ ++ TI+G+ +TD D+ + I K++ + ++ +QEL+ L
Sbjct: 30 FLSLAIASLQAKTYATIDGKPAVTDKDLEILKQSIPNFNYAKLSDQEKEGIIQELVNRQL 89
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ + + K L I W
Sbjct: 90 ILKAAKAEKLDTS-KEYTEAINNI-------------------------KDQLLIDL-WS 122
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK--RIK 203
+ N K +E R +L + K +
Sbjct: 123 KKQVGGIQMPSVNDAQIKEIYKNNEGMFINQEMHARHILVKTESEAKDIIKELDKAGKKA 182
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PY 261
+++ L K + K A + G + +HP F N T P
Sbjct: 183 ESKFIELANAKSTDPASKQAK-----NGGDLGTFQRNVMHPDFANAASNLKPGTYTQEPV 237
Query: 262 VTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T G I + K + + K + Q ++ + ++ LR A I
Sbjct: 238 QTPFGYHVIYLIKKSEPKIIPYNEAKKIIEEQIKMQNVQGGMMQKIQALREKAKIQ 293
>gi|297584461|ref|YP_003700241.1| hypothetical protein Bsel_2171 [Bacillus selenitireducens MLS10]
gi|297142918|gb|ADH99675.1| hypothetical protein Bsel_2171 [Bacillus selenitireducens MLS10]
Length = 250
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 21/152 (13%)
Query: 42 IRTTINGEVI----TDGDISKRIALLKLQKIN----------GELEKIAVQELIVETLKK 87
+ T+NGE I + + + + Q I+ ++++ V ELI L
Sbjct: 69 VVATVNGEDIPMANLEMQLQQYEMMFAQQGIDFEDEENMALLMQIQEGIVDELIQLELLV 128
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
QE + I D + V Q +DF L QG ++ + + +
Sbjct: 129 QEADSQNIQADEDEVQAEMEQIRSQFD---DDFEEVLASQGYTEDLLENEIRDSLKLNQL 185
Query: 148 VKNDFML----KYGNLEMEIPANKQKMKNITV 175
+ +++ + + E+E +Q +N +
Sbjct: 186 LSPEYIETLDFEVTDEELEEAYEQQAAQNPEI 217
>gi|310829352|ref|YP_003961709.1| hypothetical protein ELI_3795 [Eubacterium limosum KIST612]
gi|308741086|gb|ADO38746.1| hypothetical protein ELI_3795 [Eubacterium limosum KIST612]
Length = 497
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 76/242 (31%), Gaps = 20/242 (8%)
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGL---SAEDFSSFLDKQGIGDNHFKQYL---AI 140
+ E+ I ++ + + ++ + +L+ + + +Y A
Sbjct: 238 IKYCEEYNIEIKQEEIDNALQTKQSIQKMMFQTDDELNQYLENYFLTKEKYDEYQKEDAR 297
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
++ + ++ + K+ + + +++ +
Sbjct: 298 GIAAGQAIQAKVTEDVKVSDTDLRKYYKDHKDSYDESTVSAEHIL------TEDEALANE 351
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNL-LKKSQNNTT 258
A++ + + +D K+ V + + +F + +N+ +
Sbjct: 352 IYDKAKDVKTK--EDFEKIMNEYKSNEKVKEATDLGAFNKEKMVSEFSDAAFGMEKNSVS 409
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY--VKK-LRSNAIIH 315
P T+ G I + DK D GE + + K EK +Y +K+ L I
Sbjct: 410 KPVKTEYGYHIIYVYDKND-AGEASFEDKKDEITKAVKEEKGTEDYNKLKEDLLKKEKID 468
Query: 316 YY 317
Y
Sbjct: 469 IY 470
>gi|194014491|ref|ZP_03053108.1| foldase protein PrsA [Bacillus pumilus ATCC 7061]
gi|194013517|gb|EDW23082.1| foldase protein PrsA [Bacillus pumilus ATCC 7061]
Length = 294
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 28/221 (12%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L +Q++ ++ ++ + L + D+ G K Y+ Q +
Sbjct: 57 LVQQKVLADKYKVSDKEIDKKMEEYKKT--LGEDRLKQLQDEFG------KDYIKDQVKY 108
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + + E+ A +K IR + D K ++ + +
Sbjct: 109 ELLTQKAAKANIKITDKEVKAYYDDLKG------KIRASHILVADKKTADEVEKKLDKGE 162
Query: 205 A-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQF-QNLLKKSQNNTTNPY 261
+ D + G + E + F + K N + P
Sbjct: 163 KWDAVVSEYSTDTASAAQ---------GGDVGWFAKEGQMDENFSKAAFKLKVNEISKPV 213
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+Q G I ++R + +KA L + K
Sbjct: 214 KSQFGYHIIKKTEERGKYDD--MKADLKKELLNQKQADTNE 252
>gi|319775064|ref|YP_004137552.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
F3047]
gi|317449655|emb|CBY85861.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
F3047]
Length = 622
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 41/376 (10%), Positives = 110/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q V +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEVFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPD---------------------------- 189
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQY 258
Query: 190 ---NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKFASK-----IHDVSIGKAQYL 237
NK Q I+ A E ++ + A I + G ++
Sbjct: 259 YQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAKAKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
E++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|116492445|ref|YP_804180.1| peptidylprolyl isomerase [Pediococcus pentosaceus ATCC 25745]
gi|122266091|sp|Q03GD4|PRSA_PEDPA RecName: Full=Foldase protein prsA; Flags: Precursor
gi|116102595|gb|ABJ67738.1| Parvulin-like peptidyl-prolyl isomerase [Pediococcus pentosaceus
ATCC 25745]
Length = 295
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 96/289 (33%), Gaps = 44/289 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
VLI F + + ++ A ++ T +G IT + + N K +QE+
Sbjct: 4 VLIGFASIAM-AFTLAACGNKTVATTSGGKITQDEYYSSLK-------NTTSGKQVLQEM 55
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
IV + + ++ G TV + + G S F S L G+ + K +
Sbjct: 56 IVNKVLE---KQYGDKVSKKTVTKQYNSYKDQYGSS---FKSILSSNGMTTSSLKTQIRS 109
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + VK + + +L+ E K +TV + L+ +K
Sbjct: 110 NLLLKEAVKANDKISNADLKKEW---KSYEPKVTVAQILVS-----------------KK 149
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQFQNL-LKKS 253
+ +L D KL K S D S + + L F+ K
Sbjct: 150 STAEDIIKKLNDGGDFTKLAKQYST--DSSTKNKGGKIAAFDDTNSTLDSSFKKAAFKLD 207
Query: 254 QNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ TT P T+ G + I + +K G L + +
Sbjct: 208 EGKYTTTPVKTEYGYQVIKMINKPSKGKMSDHTKELKERIWNADMSDST 256
>gi|325268743|ref|ZP_08135371.1| peptidyl-prolyl cis-trans isomerase [Prevotella multiformis DSM
16608]
gi|324988911|gb|EGC20866.1| peptidyl-prolyl cis-trans isomerase [Prevotella multiformis DSM
16608]
Length = 480
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 89/271 (32%), Gaps = 28/271 (10%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQEL 80
VP + ++ + + + E I ++ ++KLQ +G+ E + +++
Sbjct: 41 TVPAATDRANNVVDEVIWVVGDEPILKSEVE----IMKLQGEAEGMKWDGDPECVLPEQI 96
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG--LSAEDF--SSFLDK-QGIGDNHFK 135
V+ L + I + + Q +S L++ Q +
Sbjct: 97 AVQKLFLHQAALDSIEVTESEIAQGIDQ---QINYWISLPQIGSKEKLEEFQHKSMAQIR 153
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN------ITVREYLIRTVLFSIPD 189
Q L +V+ G++++ ++ + + + +L P
Sbjct: 154 QDLHDDYKNRQLVQKMQEKLVGDVKVSPAEVREYFRKLPVDSIPMIPTTVEVEILTQTPK 213
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ 247
+ + ++ +++D + + L + S+ + G+ Y+ L P F
Sbjct: 214 VEPEEINRIKNQLRDYTDRITKGETSFATLARLYSEDPGSARQGGELGYMGRGMLDPTFA 273
Query: 248 NLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ ++ G I + D+R
Sbjct: 274 AAAFNLTDPKKVSKVVESEFGYHIIQLIDRR 304
>gi|227511814|ref|ZP_03941863.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577]
gi|227084904|gb|EEI20216.1| peptidylprolyl isomerase [Lactobacillus buchneri ATCC 11577]
Length = 295
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 89/280 (31%), Gaps = 33/280 (11%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
+ A SS+ TING IT + + + A+ ++I++
Sbjct: 8 VILAGIGAGLILSACSSQSVATINGSNITKDAYYQEMK-------ESPSGQQALGQMILD 60
Query: 84 T-LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L+KQ G + V + G S FS+FL + G+ + +K+ L
Sbjct: 61 KGLEKQ----YGNKVKNTAVTRQLNTVKKQYGAS---FSAFLTQNGLTASQYKRNLKEDL 113
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ +K + G L+ + K +TV + L+ + QK I
Sbjct: 114 LLKAAIKANTKFTPGMLKQQF---KHYQPKVTVNQILV------------SKKATAQKVI 158
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NP 260
A+K I + L P F+ K T P
Sbjct: 159 DQLNAGHSFAKLATAYSTDAATKKKSGRISPFD-NTNTTLDPNFKKAAFKLKTGQYTKTP 217
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
TQ G E I + + G K L Q TK +
Sbjct: 218 VKTQYGYEVIQMVNHPAKGTHQNHKEALKNQIVDTKAADN 257
>gi|198283164|ref|YP_002219485.1| hypothetical protein Lferr_1036 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198247685|gb|ACH83278.1| hypothetical protein Lferr_1036 [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 522
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/230 (11%), Positives = 64/230 (27%), Gaps = 45/230 (19%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIV-----SYKSWAMSSRIRTTINGEVITDGDISKR 59
+ + +F + ++++ + ++ S +S + T++G+ I+D KR
Sbjct: 1 MMETFRNFGRSWVAKSLMVLIALSFVLWGVSGYLFSGHSTSSVVATVDGQKISDAAFQKR 60
Query: 60 I--ALLKLQKINGELEK-----------IAVQELIVETLKKQEIEKSGITFDSNTV---- 102
+ AL + I G + LI L E + G+ +
Sbjct: 61 MKDALARYSHIFGATTAAKMAADRSFGLEVLNGLIDNMLLGMEAGRLGLQVPDAALAKKI 120
Query: 103 -------------NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK---------QYLAI 140
+ + G++ F L + + + +
Sbjct: 121 ESIPAFQEKGAFSKNLYQKLLAANGMTPAQFEDMLRES-MRLEQLQVVPQVIATASKVEA 179
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
IW + + + + A + Y F +P
Sbjct: 180 TRIWAWSQEYRDVSTVDIRDSDFAAAARPTATQVADYYHAHMDQFRLPAQ 229
>gi|83953128|ref|ZP_00961850.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842096|gb|EAP81264.1| PPIC-type PPIASE domain protein [Sulfitobacter sp. NAS-14.1]
Length = 280
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 75/266 (28%), Gaps = 50/266 (18%)
Query: 38 MSSRIRTTINGEVIT-DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
+ + T+NG IT I R L + +L + + I++ L +Q
Sbjct: 26 TAETVVATVNGTDITIGSMIIARA---TLPEQYQQLPPEVLFKGILDQLVQQTALSQDF- 81
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V A Q I +V++
Sbjct: 82 --DGEVPKRIE-MALENE------------------------RRQLIAGEVIEKAMAQDV 114
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E++ ++ E+ +L + + Q K+ +E D
Sbjct: 115 TEEELQAAYDEAYADAEPTEEFSASHILV-------ETEEEAQAVKKELDE-----GADF 162
Query: 217 NKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
+L K S + G + + P F+ + + + P TQ G I + D
Sbjct: 163 AELAKEKSTGPSGPAGGTLGWFGPGMMVPAFETAVAALEVGAVSEPVETQFGWHVIKLDD 222
Query: 275 KRDLGG----EIALKAYLSAQNTPTK 296
KR ++ + + +
Sbjct: 223 KRQKEAPKLEDVKDELETQVRQVKAQ 248
>gi|90424410|ref|YP_532780.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
gi|90106424|gb|ABD88461.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
Length = 347
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 57/158 (36%), Gaps = 5/158 (3%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
G E++ + + + R++ + + + P + ++ K E + +L
Sbjct: 173 GEDELQKVYDANRSALLVPRQFQLAQIFVAAPKDA--DKATEDNANKSLNEIQRQLKTPG 230
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDK 275
A++ + G +L E+ + P+ + L+ ++N ++P G + + D
Sbjct: 231 ADFAAIANENDGKNSGDLGWLAENQIRPEIRAQLMGMAKNAISDPVRLDDGWHILKLIDT 290
Query: 276 RDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ ++ L Q + Y+ +L
Sbjct: 291 KAAYTRTLPEVRDQLIQQMRAERATMLRQAYLTELLKR 328
>gi|311695072|gb|ADP97945.1| PpiC-type peptidyl-prolyl cis-trans isomerase [marine bacterium
HP15]
Length = 614
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 80/249 (32%), Gaps = 24/249 (9%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + I + +++ I + + T+NGE IT+ + + +
Sbjct: 1 MLQDIRNNAQGTIAKVIIGLLIVSLSIWGMDAIVGGFSGEPEVATVNGEDITEREFLRVV 60
Query: 61 ALLKLQKING------------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ ++++ ++ + LI E + Q+ G+ + ++ Q
Sbjct: 61 QMESQRRLSRMENPDPSMLDEDQIRTDVLDSLIQEQVLIQDANAQGLELNDADIDALITQ 120
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + + + F + + G+G F++ + Q + ++ + +
Sbjct: 121 MPQFQVDGQFNRDRFVATVRNMGMGVGEFREAMRKQYVVNQ-IRAGIVQSGLVADENAEQ 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
Q + IP + + + V D E + E+ +
Sbjct: 180 LLQIQNQTRSFR------VLDIPASSVADAVSVSD--ADVEAFYEENSGAFQQPERVDAA 231
Query: 226 IHDVSIGKA 234
+S+G
Sbjct: 232 YITLSLGAL 240
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 62/219 (28%), Gaps = 35/219 (15%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
++ V F+ + F+Q + + + +
Sbjct: 204 VSVSDADVEAFYEE---------------------NSGAFQQPERVDAAYITLSLGALAE 242
Query: 155 KYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ E+ A +Q+ ++ E +L + + +Q+R+ E
Sbjct: 243 SIEVDDAELQAYYEQQAADLASEERRASHILIEEGSDADETMATIQERLAAGE------- 295
Query: 214 KDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
L + S + G Y F+ L + + P T GV I
Sbjct: 296 -SFADLAREYSIDTVSAEDGGDLGYAGRGIYAEPFEEALFALEEGEVSEPVRTSFGVHLI 354
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ D R+ E+ + Q + E ++R
Sbjct: 355 RLEDVRE--SEVPSLDEMEDQLRRELAREKAREQFAEVR 391
>gi|73540631|ref|YP_295151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
gi|72118044|gb|AAZ60307.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
Length = 250
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 82/256 (32%), Gaps = 30/256 (11%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K G+ E + ++++ + L +++G++ + Q R GL A D
Sbjct: 17 FIRLLKFTGQFEGLV-EQMVRDKLTVHAAKRAGMSLAQEEIQERADQFRRVQGLHRAADM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ +LD G+ + F+ ++ + + +Q + V EY
Sbjct: 76 NHYLDALGVSLDEFEVFI------------------TDSLYQERMMEQVCNDAAVHEY-- 115
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGKAQY 236
L S + ++ V A+E L D + + A + G
Sbjct: 116 -FQLNSPRFDSIEVSHIVVDSEGKAKELISYLQDDPDSFAEMAREHSIADTRERGGDIGK 174
Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+L L + + P+ + E + K + + +
Sbjct: 175 VLRGSLKTDIEAKVFNAEAGDLLGPFPAADRSFFEVFLVRAKHPATLDSDVAVEVRRLLR 234
Query: 294 PTKIEKHEAEYVKKLR 309
+ E+V + R
Sbjct: 235 EEWLMARAQEHVIEAR 250
>gi|148828172|ref|YP_001292925.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
PittGG]
gi|148719414|gb|ABR00542.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
PittGG]
Length = 622
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 43/407 (10%), Positives = 119/407 (29%), Gaps = 117/407 (28%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R + + + L + V +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLS----------------------------AED 119
N + + + L+
Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180
Query: 120 --------------------FSSFLDKQGIGDNHFK-------------QYLAIQSIWPD 146
+ + KQ + D+ K + + +Q I D
Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYI--D 238
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ ++ ++EI Q K + ++L + F+ + +QK A+
Sbjct: 239 LSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLA-HIQFANEQDAKVAYEELQKGANFAD 297
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
++ + KI + G ++ E++L F++ Q + P
Sbjct: 298 VAKAKS----------LDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDG 347
Query: 266 GVEYIAICDKRDLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
+ + +++ ++ K+ + ++ + + + +
Sbjct: 348 NYHIVLVQERKAQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|124516598|gb|EAY58106.1| putative peptidyl-prolyl cis-trans isomerase [Leptospirillum
rubarum]
Length = 324
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 64/236 (27%), Gaps = 42/236 (17%)
Query: 49 EVITDGDISKRIALLKLQKINGEL---------EKIAVQELIVETLKKQEIEKSGITFDS 99
+ IT ++ + L + A++E + + ++E +K GI
Sbjct: 52 KAITVKNLEDTARFMGLGSASRHRPLTEWTLSERNAALRETVQDFFLEEEGKKRGIKIRP 111
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
N + + H S E F L
Sbjct: 112 NEIKDYLKNHFPQPEKSLEPF-----------------------------ARKALFLQKT 142
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCN 217
E + + Y LF I + + V K+ ++AE R L
Sbjct: 143 EEALAPFPDISISTERSFYKNHQNLFRISRQAIVDHIVVAKQ-EEAESIRDALIKGSSFA 201
Query: 218 KLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
+L K S + S G+ + + P F + T + G +
Sbjct: 202 RLAKLESLGMEASSGGRMKPYPRGTMPPPFDTVFTMKPGEITPVLSSPYGYHLFRL 257
>gi|224437416|ref|ZP_03658385.1| hypothetical protein HcinC1_05580 [Helicobacter cinaedi CCUG 18818]
Length = 281
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 85/296 (28%), Gaps = 42/296 (14%)
Query: 30 IVSYKSWAMSSRIRTTINGEV-ITDGDIS---KRIALLKLQKINGELEKIAVQELIVETL 85
+S ++ ++ TI+G+ +TD D+ + I K++ + ++ +QEL+ L
Sbjct: 15 FLSLAIASLQAKTYATIDGKPAVTDKDLEILKQSIPNFNYAKLSDQEKEGIIQELVNRQL 74
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ + + K L I W
Sbjct: 75 ILKAAKAEKLDTS-KEYTEAINNI-------------------------KDQLLIDL-WS 107
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK--RIK 203
+ N K +E R +L + K +
Sbjct: 108 KKQVGGIQMPSVNDAQIKEIYKNNEGMFINQEMHARHILVKTESEAKDIIKELDKAGKKA 167
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PY 261
+++ L K + K A + G + +HP F N T P
Sbjct: 168 ESKFIELANAKSTDPASKQAK-----NGGDLGTFQRNVMHPDFANAASNLKPGTYTQEPV 222
Query: 262 VTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
T G I + K + + K + Q ++ + ++ LR A I
Sbjct: 223 QTPFGYHVIYLIKKSEPKIIPYNEAKKIIEEQIKMQNVQGGMMQKIQALREKAKIQ 278
>gi|225872709|ref|YP_002754166.1| peptidylprolyl cis-trans isomerase, putative [Acidobacterium
capsulatum ATCC 51196]
gi|225793467|gb|ACO33557.1| peptidylprolyl cis-trans isomerase, putative [Acidobacterium
capsulatum ATCC 51196]
Length = 660
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 81/265 (30%), Gaps = 27/265 (10%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
E ++ + L+ + +T V +++Q S +Q I
Sbjct: 162 ESEVKNAIVEDRLRS--LVSGAVTVSPEQVKQYYLQQGLKINFQYAVLDSNALRQTINPT 219
Query: 133 HFKQYLAIQSIWPDVVKN----DFMLKYGNLEMEIPANKQKMKNITVREY---------- 178
+ + K + + +IP ++ + +++Y
Sbjct: 220 DAQLQTYFKQNAGRYAKAIPETRSIQYIAFQDSQIPGGAPQVTDAEIQQYYNAHQDQYKV 279
Query: 179 ----LIRTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKIHDVS-- 230
+R +L +P K + ++ + K+ +L K S
Sbjct: 280 PEEVKVRHILIQVPQGAPAATVAAAKTKAQSVLDQLKQANGKNFAELAKKYSDDPGSKDQ 339
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAY 287
G+ ++ + P F + + ++ TQ G I + DK E +A
Sbjct: 340 GGELGWVKQGMTVPAFDHAIFTMPVGQISDLVRTQYGFHIIQVEDKHTAHTEALSDVRAQ 399
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + T K A Y ++L A
Sbjct: 400 ILSTLTQQKENDAAASYAQQLAKEA 424
>gi|288941221|ref|YP_003443461.1| nitrogen fixation protein NifM [Allochromatium vinosum DSM 180]
gi|288896593|gb|ADC62429.1| nitrogen fixation protein NifM [Allochromatium vinosum DSM 180]
Length = 290
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 83/275 (30%), Gaps = 30/275 (10%)
Query: 50 VITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKKQEIEKSGITFDSNTVN 103
+ D ++R + +L + LE A LI E ++
Sbjct: 31 PVDALDAAQRTVVERLAEQTWTLESLVLATDEARDTLIPER----------------HLD 74
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ R F + L + G+ + +Q L + I+ V+ E E+
Sbjct: 75 EALTEVRRRYP-DEGAFLADLARNGLDETGLRQALRRELIFDAVMTRVGARAEAVSEEEV 133
Query: 164 PA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PKDCNKLE 220
+ + R +L +I + +N + +A + + P +L
Sbjct: 134 RRFHAEHPERFQIPERRAARHILITINADYAENGREAARARIEALAADAQARPDAFGQLA 193
Query: 221 KFASKIHDVSI-GKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI--AICDKR 276
+ S+ G+ L L+P+ L + ++ G + +
Sbjct: 194 RRHSECPTALEDGRLGTLPRGRLYPELDAALFALDAGQVSGVLESEIGFHLLWCEHIEPG 253
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ ++ + + + ++ +LR
Sbjct: 254 RTIDFEQARPHIRERLQSQRRHDCQKAWIARLRRA 288
>gi|149176439|ref|ZP_01855053.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris
DSM 8797]
gi|148844791|gb|EDL59140.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris
DSM 8797]
Length = 369
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 101/292 (34%), Gaps = 28/292 (9%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKINGELEKIAVQELIVETLKKQE 89
+S + ++ + VI++ ++++ IAL ++ +I + +Q
Sbjct: 60 ISGNQPSARTQPVAKVGSVVISEDELARECIALYG---------PEVLENVINRAIIEQA 110
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNHFKQYLAIQSIWPDVV 148
+K+G+ + V+ + A+ L + + L + + N +++ + IWP +
Sbjct: 111 CQKAGVNVEQAEVHAEVEKIAKRFNLDTKTWYEMLQAERKMNPNQYRRNV----IWPMLA 166
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ L + + VR+Y R I + L V +K
Sbjct: 167 LRKLAGQRTKLSQDQV------QKAFVRDYGPRVKARMIMMDNLSRAQKVWDEVKKNPGD 220
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVE 268
R +D + S+ +I E++ ++ K + +
Sbjct: 221 FERFARDYSIEPN--SRALGGAIQPIPQFSENE--SLWKAAFKLKEGEVSGIVQIGLSRY 276
Query: 269 YIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
I +C+ R + ++ L Q T + ++ A KL+ + Y
Sbjct: 277 AILLCEGRTEPIVNSIKEVENQLVDQLTEEQTQEAVARVFAKLKEQTRVDNY 328
>gi|194290267|ref|YP_002006174.1| peptidylprolyl isomerase [Cupriavidus taiwanensis LMG 19424]
gi|193224102|emb|CAQ70111.1| putative Peptidylprolyl isomerase [Cupriavidus taiwanensis LMG
19424]
Length = 250
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 81/252 (32%), Gaps = 22/252 (8%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDF 120
++L K+ G+ E + ++++ + L ++ G+ + Q R GL A D
Sbjct: 17 FVRLLKLTGQFEGLV-EQIVRDKLTVHAAKRQGMVVTPEEIQERADQFRRVQGLHRAADM 75
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ +LD + + F+ ++ + + M + + A Q+ + +
Sbjct: 76 NHYLDALNVSLDEFEAFIT-----DSLYQERMMAQVCS-----EAAVQEYFALNSPRFDS 125
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
V + D++ + + + D E + + G+ +L
Sbjct: 126 IEVSHIVVDSEGKARELISYLQDDPEAFA-------EMAREHSIADTRERGGEIGKVLRG 178
Query: 241 DLHPQF-QNLLKKSQNNTTNPYVT--QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
L + + + P+ + E + K + + + +
Sbjct: 179 SLKTEIEAKVFNAEPGDLLGPFPAADRSFFEVFLVRAKHPATLDSEVAVEVRRLLREDWL 238
Query: 298 EKHEAEYVKKLR 309
E+V + R
Sbjct: 239 MARAQEHVIEAR 250
>gi|281421754|ref|ZP_06252753.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella copri
DSM 18205]
gi|281404249|gb|EFB34929.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Prevotella copri
DSM 18205]
Length = 484
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%)
Query: 40 SRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + E I D+ + A + K G+ + +++ V+ L + I
Sbjct: 59 DEVIWVVGDEAILKSDVEVTRLQAEAEGIKYTGDPDCSIPEQIAVQKLFLHQAAIDSIEV 118
Query: 98 DSNTVNYFF-VQHARNTGL--SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ V Q + S E + + +Q + +++
Sbjct: 119 SESEVMNGIDEQINSWVSMIGSREKLEEYRKQ---SITQMRQQMHDDFKNQQLIQKMKQE 175
Query: 155 KYGNLEMEIPANKQKMKNITV-------REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
++++ ++ K++ E + +L P L+ V+ ++++ +
Sbjct: 176 LVKDIKVSPAQVRKYFKDLPADSIPFVPTEVEV-EILTMQPRIPLEEINRVKNQLREFTD 234
Query: 208 SRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVT 263
+ L + S+ + G+ Y+ L P F N+ + +
Sbjct: 235 RVNKGETSFATLARLYSEDPGSARMGGEMDYIGRGMLDPAFANVAFNLTDPKKISKIVES 294
Query: 264 QKGVEYIAICDKR 276
+ G I + DKR
Sbjct: 295 EFGYHIIQLIDKR 307
>gi|53804280|ref|YP_114087.1| peptidyl-prolyl cis-trans isomerase family protein [Methylococcus
capsulatus str. Bath]
gi|53758041|gb|AAU92332.1| peptidyl-prolyl cis-trans isomerase family protein [Methylococcus
capsulatus str. Bath]
Length = 325
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 83/293 (28%), Gaps = 46/293 (15%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87
A +NG IT ++ + L ++ E+ V EL+ L +
Sbjct: 31 ASAAKAGITATPENSVAVVNGTAITKAEVGAIKSELAQRRSGEVSEEKIVDELVKRELLR 90
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
Q+ +T + + +A LS +A +
Sbjct: 91 QDAVAKQLTKNPEY--QARIDNAERVILS--------------------QIAAE------ 122
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
DFM + E+ R EY R +L D + K E
Sbjct: 123 ---DFMKNLTISDEELQKEYDSRIGAMQRAEYRARHILVDKEDVAKDIIAKLGK-GAKFE 178
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQ 264
+ + KD + G+ + + F ++K + T P TQ
Sbjct: 179 DLAKKFSKDPGSNNE---------GGELGWFSPQQMVQPFSEAVEKLKNGEITQVPVQTQ 229
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
G I + R+ + Q + +Y+ L + A + +
Sbjct: 230 FGWHVIQREESRESA--PPAFDAVKEQIKSMLQTQKLHQYIDDLMAKAKVERF 280
>gi|189463690|ref|ZP_03012475.1| hypothetical protein BACINT_00021 [Bacteroides intestinalis DSM
17393]
gi|189438640|gb|EDV07625.1| hypothetical protein BACINT_00021 [Bacteroides intestinalis DSM
17393]
Length = 528
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 95/309 (30%), Gaps = 53/309 (17%)
Query: 12 FIKLLTTYFVLI---IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+I L V+I + I + +A + ING+ I + +
Sbjct: 6 YIVLFQKKIVMIRSGLTIIFLCLGLTVFAQQDPMLMRINGKDILRSEFE---YIYNKNNA 62
Query: 69 NGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+E+ + E + LK E G+ + F L
Sbjct: 63 LSGIEQKTLNEYVDLFVNFKLKVAAAEAMGLD-------------------TTRAFREEL 103
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTV 183
+ + + ++ E+ KMK N + + +
Sbjct: 104 E-----------------GYRRQLAKTYLTDETVSELAARQIYDKMKANQRAGQVRVSHI 146
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
S+P + + D+ + L+ + D K+ ++ +
Sbjct: 147 FKSLPQTATSHLLRTTETRMDSLYTALQ--NGQADFDACVRNFSD--EKKSFWVSWLQMP 202
Query: 244 PQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHE 301
+F++ + K + P+ T +G+ + + +++D+ E + Q ++K
Sbjct: 203 AEFEDTVFKMKPGEISRPFFTPQGIHIVKVLERKDILPFEDVKDEIIRRQTRRHGMDKGT 262
Query: 302 AEYVKKLRS 310
V+KL+
Sbjct: 263 ESLVEKLKK 271
>gi|297568757|ref|YP_003690101.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio
alkaliphilus AHT2]
gi|296924672|gb|ADH85482.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurivibrio
alkaliphilus AHT2]
Length = 305
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 82/238 (34%), Gaps = 34/238 (14%)
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ L E FL + G G HF + + ++ + +K+D E+
Sbjct: 45 MEEVKTEMELRPEAVQGFLQQHG-GAAHFVDSLVTKEILYQEALKHDLDQLPRLQELVRD 103
Query: 165 ANKQKMKNITVREYLIRTVLFS-----------IPDNKLQNQGFVQKRIKDAE------E 207
K + ++ V + L + + + ++ V K + + +
Sbjct: 104 FRKTTLASLLVEKKLSDKIELNDEVLQRYLHENAEEFTVKTAVQVSKIVVETPEKAREVQ 163
Query: 208 SRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQ----NLLKKSQNNTTNPY 261
+RL D + + S+ + G ++ L N+L+ Q + P
Sbjct: 164 ARLAASDDFAVVAQQFSRHEESAANGGDLGFVGRQALPSDLAHHAFNVLR--QGEISAPI 221
Query: 262 VTQKGVEYIAICDKRDLGGEIAL----KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
V G+ ++ + D R G++ + L+ Q P + +Y+ +L+ I
Sbjct: 222 VQSGGIYFLKVSDYR---GDLPEFDKIRQLLTQQVAPHLRQNAFEQYLAELKEEYQIE 276
>gi|121602142|ref|YP_988681.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Bartonella bacilliformis KC583]
gi|120614319|gb|ABM44920.1| PPIC-type PPIASE domain protein [Bartonella bacilliformis KC583]
Length = 315
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 89/285 (31%), Gaps = 54/285 (18%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S + TI+G+ IT G + ++A++ I L + E+ IT
Sbjct: 49 SHVMATIDGKNITAGQLD----------------ELALE--INPNLVRIPDEQRRITVLR 90
Query: 100 NTVN-YFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
++ + A + E + + + + Q + +V + K
Sbjct: 91 AYLDMQVLAKAAIQENIHKTEAYDKRMAV-------MRDNILQQLYFKQMV----VDKIT 139
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ +++I +K+ E R +L + KR+K E KD
Sbjct: 140 DGDLKILYDKEVAALPKEDEVKARHILVKTKK----EAQAIIKRLKKGENFEEIAKKDST 195
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDK 275
G Y + F++ T NP + G I + D+
Sbjct: 196 DG-------SAAVGGDLGYFSYGQMVKPFEDAAFSLKVGEYTKNPVESPFGWHIIKVEDR 248
Query: 276 R----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
R + K L AQ + ++ + LRS + Y
Sbjct: 249 RLKQPPEFDD--AKEVLRAQIIKDRYQQL----IADLRSKIDVKY 287
>gi|312597426|pdb|3NRK|A Chain A, The Crystal Structure Of The Leptospiral Hypothetical
Protein Lic12922
Length = 325
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 98/306 (32%), Gaps = 18/306 (5%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDIS-KRIALLKLQKI------NGELEKIAVQEL 80
+ +R+ T+ I++ D+ +LQK + L
Sbjct: 2 AGSAAAPFTESLNRVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFL 61
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLD-KQGIGDNHFKQYL 138
I + E+ I + V+ + G++ + F ++ G+ + L
Sbjct: 62 IDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTEL 121
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q +++ + E EI + + K+ E R + + ++ +Q + +
Sbjct: 122 PYQIKKGQLLQLKIAVPP-PNEQEIRSWYNQNKDKVGFEIRYRIISIAPENDSIQEENRL 180
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQNLLK----K 252
K + + +S L P + + + +++ DL+ +
Sbjct: 181 YKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPL 240
Query: 253 SQNNTTNPYVTQKGVE-YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ + ++ + I KR E L+ + K E ++K+ R+
Sbjct: 241 PNGGVSEVFRDERKRYCILKIEGKRPTPMEN-LRGGIQNILYRDKEEDTFHRWLKESRAE 299
Query: 312 AIIHYY 317
I +
Sbjct: 300 IPIQIF 305
>gi|47565690|ref|ZP_00236730.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241]
gi|47557326|gb|EAL15654.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241]
Length = 283
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 72/227 (31%), Gaps = 36/227 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F + L++ G+ ++ K+ + + + +K
Sbjct: 68 KVSDEEAKKKVEEAKDKMG---ENFKATLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 120
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ K+ E + +L K +K+ ++ +
Sbjct: 121 --TVTEKDV-------KDNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 159
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K + P T G I
Sbjct: 160 DFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKLDAGKVSEPVKTTYGYHIIK 219
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK----LRSNAII 314
+ DK++L +K + +++ ++ ++ L +A I
Sbjct: 220 VTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNGLLKDADI 266
>gi|229017643|ref|ZP_04174536.1| Foldase protein prsA 1 [Bacillus cereus AH1273]
gi|229023860|ref|ZP_04180344.1| Foldase protein prsA 1 [Bacillus cereus AH1272]
gi|228737447|gb|EEL87958.1| Foldase protein prsA 1 [Bacillus cereus AH1272]
gi|228743649|gb|EEL93756.1| Foldase protein prsA 1 [Bacillus cereus AH1273]
Length = 276
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 83/265 (31%), Gaps = 50/265 (18%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
L+ L ++ + + +++ K +E +K V+ Q
Sbjct: 35 SKELRQTYGKSTLSQMMLNKALLDKYKVSDEEAKK--------QVDAAKEQMG------- 79
Query: 118 EDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ F L++ G+ ++ K+ + + +K + ++ K+
Sbjct: 80 DKFEVALEQVGLKNEDELKEKMKPEIALEKAIKA------TVTDKDV-------KDNHKP 126
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKA 234
E + +L K +K+ ++ +D L K S+ G+
Sbjct: 127 EMKVSHILVK--------DEKTAKEVKE----KINNGEDFTTLAKQYSEDTGSKEQGGEI 174
Query: 235 QYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+F+ K + P T G I + DK++L +K +
Sbjct: 175 AGFAPGQTVKEFEEAAYKLDAGQVSEPIKTSYGYHIIKVTDKKELKPFDEVKDTIRKDLE 234
Query: 294 PTKIEKHEAEY----VKKLRSNAII 314
+++ ++ + L A I
Sbjct: 235 QQRLQDATGKWKQQVINDLLKEADI 259
>gi|304395503|ref|ZP_07377386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. aB]
gi|304356797|gb|EFM21161.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. aB]
Length = 622
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 36/317 (11%), Positives = 89/317 (28%), Gaps = 82/317 (25%)
Query: 43 RTTINGEVITDGDISK-----RIA--------LLKLQKING---ELEKIAVQELIVETLK 86
+NG+ I+ G + + R +L +G ++ + A+ +LI + L
Sbjct: 42 AAKVNGQEISRGQLEQAFNSERSRQQQMLGDQFSQLASNDGYMQQIRQQALSQLIDQALL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
I+ ++ + V N + + + G + + + L Q
Sbjct: 102 DSYIKDLHLSISDDQVKQAIFNQQAFQTNGKFDNAKYLALIGNMGFSADQYAEALRKQLS 161
Query: 144 WPDVVKN---------------------DFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
++ ++ L++ A KQ + + + +Y +
Sbjct: 162 NQQLINAVANTDFTLKGEASKLVDLVSQQRDIRQATLDVNALAAKQTVTDDEISQYYQQH 221
Query: 183 -VLFSIPDN-----KLQNQGFVQKRIKDAEE--------------SRLRLP----KDCNK 218
F P+ L + +Q+ +A+ R R K
Sbjct: 222 KTSFMAPEQFRVSYILMDAASMQQDASEADIQAWYDQHKADYTQPQRTRYSVIQTKTEAD 281
Query: 219 LEKFASKIHDVS------------------IGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
+++ + G +L S + +N + +
Sbjct: 282 ANAVLAQLKGGASFADVAKAKSIDPISARKGGDMGWLEPSTTPDELKNAGLTQKGQMSGV 341
Query: 261 YVTQKGVEYIAICDKRD 277
+ G + + D +
Sbjct: 342 IKSSVGFLVVRLDDIQP 358
>gi|198276170|ref|ZP_03208701.1| hypothetical protein BACPLE_02359 [Bacteroides plebeius DSM 17135]
gi|198270982|gb|EDY95252.1| hypothetical protein BACPLE_02359 [Bacteroides plebeius DSM 17135]
Length = 423
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 9/188 (4%)
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G +++ Q + +S E F + K+ W +
Sbjct: 21 GEETSVEEFEHYYTQVYAVSRVSVEQFLPHFLYYKLKVADAKRQ-----SWDTITDFRLQ 75
Query: 154 LKYGNLEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
E+ + + R + F +P + Q V ++ D+ + L+
Sbjct: 76 CSALQNEILKSEKRGVPQKQDTLLNWVRFRQISFLLPQHASSEQERVARQRIDSVYTALK 135
Query: 212 LPKDCNKLEK-FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
KL + + + +++ E L +F L + N + P+ + G+
Sbjct: 136 NGIPFEKLAQPYIKNLLPSPYLDGEWIPERCLIKEFTEQLSTLKKGNYSAPFFSPLGIHI 195
Query: 270 IAICDKRD 277
+ + D+R
Sbjct: 196 VYLLDRRQ 203
>gi|149177450|ref|ZP_01856054.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris
DSM 8797]
gi|148843783|gb|EDL58142.1| probable peptidyl-prolyl cis-trans isomerase [Planctomyces maris
DSM 8797]
Length = 407
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 89/304 (29%), Gaps = 31/304 (10%)
Query: 40 SRIRTTINGEVITDGDI-----------SKRIALLKLQKINGELEKIAVQELIVETLKKQ 88
S + +NG + DI +R+ + QK+ L K ++ I L
Sbjct: 93 STVVAMVNGTPLFVSDIIGVYDFQLKQAEQRMPPEEYQKLRRALVKRDLKSHIERQLLIH 152
Query: 89 EI----EKSGITFDSNTVNYFFV-------QHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
E+ +K + ++ F Q A S ++ L++QG + K+
Sbjct: 153 EMKTTLKKEQLAMLQEHLDKAFDEERIPELQKAVGAS-SPQELEEKLNQQGRSLYYEKEL 211
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
Q + K E+ A + + R I K +
Sbjct: 212 FMKQQSALQFMAVKAKSKNDFSREEVLARYKSNLDEYAYPAKARWQRIRISYAKHGGKDK 271
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH--PQFQNLLKKSQN 255
+ + EK++ G+ + L L +
Sbjct: 272 AVGVLDEVIHKLQAGENFGTLAEKYSDGPRAEKKGQWGWTGRGSLADSEVEAALFELPVG 331
Query: 256 NTTNPYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T+ + T + + + D+++ G ++ + K E + +L
Sbjct: 332 QTSQVFETDDSFQIVKVIDRKEAGHTPFADVQAQLE--QSMVNDARMKATRETLDQLFKK 389
Query: 312 AIIH 315
AII
Sbjct: 390 AIIE 393
>gi|301169728|emb|CBW29329.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Haemophilus
influenzae 10810]
Length = 622
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 43/407 (10%), Positives = 119/407 (29%), Gaps = 117/407 (28%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R + + + L + V +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLS----------------------------AED 119
N + + + L+
Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180
Query: 120 --------------------FSSFLDKQGIGDNHFK-------------QYLAIQSIWPD 146
+ + KQ + D+ K + + +Q I D
Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYI--D 238
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ ++ ++EI Q K + ++L + F+ + +QK A+
Sbjct: 239 LSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLA-HIQFANEQDAKVAYEELQKGANFAD 297
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
++ + KI + G ++ E++L F++ Q + P
Sbjct: 298 VAKAKS----------LDKISGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDG 347
Query: 266 GVEYIAICDKRDLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
+ + +++ ++ K+ + ++ + + + +
Sbjct: 348 NYHIVLVQERKAQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|159046106|ref|YP_001534900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dinoroseobacter
shibae DFL 12]
gi|157913866|gb|ABV95299.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dinoroseobacter
shibae DFL 12]
Length = 280
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 95/313 (30%), Gaps = 54/313 (17%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
+ ++ + + + A + + T+ GE IT L L +
Sbjct: 1 MNIIRKPLARLALGLTLLSPVAVQAQDADTVLATVGGEEIT---------LGHLIAVASS 51
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-HARNTGLSAEDFSSFLDKQGIG 130
L Q+L + L +E+ + ++ LS E L I
Sbjct: 52 LPTQ-FQQLADDRLYSGLLEQM---IRQVALAQSMGDSLSKELELSLESQRWALMANSII 107
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
D + + + V+ + ++GN+E E +E+ +L +
Sbjct: 108 DGAIEAAVT-----EESVQALYDAEFGNIEPE-------------KEFNASHILVETEEE 149
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NL 249
++ AE +R R + G+ + + F+ +
Sbjct: 150 AQALVTELEGGADFAELARARSV-----------GPSGPNGGELGWFGPGMMVAPFEMAV 198
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL- 308
++ + P TQ G I + D RD L+ + + E+ E V L
Sbjct: 199 IRMEPGTVSEPVETQFGWHVIRLNDIRDSAA-QPLE-EVRGRLEERLSEEAAQEVVDSLV 256
Query: 309 ------RSNAIIH 315
RS A I
Sbjct: 257 AATEITRSEAEID 269
>gi|187923900|ref|YP_001895542.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
gi|187715094|gb|ACD16318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
Length = 645
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 72/238 (30%), Gaps = 25/238 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + ++ V I ++ + S ++NG IT + D + R L
Sbjct: 5 FRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFF 106
+ +++ G E + LI + + E ++ +T + V +
Sbjct: 65 RARQMLGAQFDMKSFDTPERRAQMLDGLIEQRVLADETQRLHLTASDDAVRRVLMSDPVI 124
Query: 107 VQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G + + + L QG+ + + + + +
Sbjct: 125 SSLKNPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQL-----PASIQGSAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAEQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNEFATPATATIQYV 237
>gi|229552580|ref|ZP_04441305.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1]
gi|258508775|ref|YP_003171526.1| peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus
GG]
gi|258539953|ref|YP_003174452.1| peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus
Lc 705]
gi|229314132|gb|EEN80105.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1]
gi|257148702|emb|CAR87675.1| Peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus
GG]
gi|257151629|emb|CAR90601.1| Peptidylprolyl cis-trans isomerase PrsA1 [Lactobacillus rhamnosus
Lc 705]
gi|259650081|dbj|BAI42243.1| peptidylprolyl isomerase [Lactobacillus rhamnosus GG]
Length = 300
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 86/277 (31%), Gaps = 33/277 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ + V+ SS + G +T + + + ++ +I
Sbjct: 5 ILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMK-------KTTTGQATLRNMI- 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
LK E ++ VN F + + G S F S L++ G ++ FK +
Sbjct: 57 -VLKALE-QQYPNKVSDKKVNSQFNKLKKQYGSS---FDSTLEQNGYTESSFKDQIRTTL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMK--NITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ +M+ P KQ + ++ +L D Q QK
Sbjct: 112 ----------YSEVALKDMKKPTTKQIESQWKKYQPKIQVQHILVKTEDEAKQIISDYQK 161
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
+ L + K + L+S LKK+ + TT P
Sbjct: 162 DPTEKNFESLAKKNSIDTGTK-NKGGKLAAFDNTDTSLDSTFKSAAFK-LKKAGDITTTP 219
Query: 261 YVTQKGVEYIAICDK------RDLGGEIALKAYLSAQ 291
TQ G I + ++ ++ + Y S Q
Sbjct: 220 VKTQYGYHVIRVISIAKKGTMKEHKKDLEKQIYTSWQ 256
>gi|153010218|ref|YP_001371432.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi ATCC 49188]
gi|151562106|gb|ABS15603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi ATCC 49188]
Length = 308
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 84/279 (30%), Gaps = 38/279 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
++NG I + DI L + Q E A+ + +
Sbjct: 48 AVSVNGVAINETDI-----LTEAQNHPSENPGAALLA----------------AARALAI 86
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+Q AR TG+ E + ++ ++ + V+ + E
Sbjct: 87 RELLLQRARETGIVPEHEKDAEGRSETDEDAL-----VRMVIEREVE---VPSATREEAL 138
Query: 163 IPANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + + +L + P + + A + +
Sbjct: 139 RFYENNRHRFTSAPILEASHILIAADPADSQAREKARTTASHLASSVIAAPATFASVAHE 198
Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKR--- 276
++S G L P+F + L + + T P ++ G + + D+R
Sbjct: 199 YSSCPSGAQGGNLGQLTRGSTVPEFERALERLTPGEITPAPIESRFGFHIVRL-DRRIEG 257
Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+L + ++ + K ++Y+ L ++A I
Sbjct: 258 EELPFDYVADR-IAGWLEASTWSKAVSQYIAILAADADI 295
>gi|163733010|ref|ZP_02140454.1| PPIC-type PPIASE domain protein [Roseobacter litoralis Och 149]
gi|161393545|gb|EDQ17870.1| PPIC-type PPIASE domain protein [Roseobacter litoralis Och 149]
Length = 285
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 82/265 (30%), Gaps = 46/265 (17%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTINGEVI-TDGDISKRIALLKLQKINGEL 72
+ + L P+V+ + + ++NGE I I+ R L + + N
Sbjct: 6 RILAFSALTAAIAAPVVAQDEVTYTADTVVASVNGEDIKLGHMIAARATLDE--RYNQIP 63
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
L+ + +++ + + ++ ++ L +
Sbjct: 64 ADQLWNGLLEQLVQQTALA------------QGIESLSAGEAMALDNQERSLKAAKAIEI 111
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+Q + + ++ + ++GN++ E E+ +L + +
Sbjct: 112 ALEQAIT-----EEDIQAAYDAEFGNIDPEE-------------EFNASHILLETEEEAI 153
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251
+ + A +R + ++ + G+ + + P F +
Sbjct: 154 AVKEAIDAGANFAATAREK-----------STGPSGPNGGELGWFGTGMMVPSFEAATIA 202
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKR 276
++P TQ G I + D R
Sbjct: 203 LEVGEVSDPVETQFGWHVIVLNDTR 227
>gi|309973498|gb|ADO96699.1| Putative peptidyl-prolyl cis-trans isomerase [Haemophilus
influenzae R2846]
Length = 622
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 41/376 (10%), Positives = 110/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q V +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEVFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPD---------------------------- 189
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQY 258
Query: 190 ---NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKFASK-----IHDVSIGKAQYL 237
NK Q I+ A E ++ + A I + G ++
Sbjct: 259 YQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAKAKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
E++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|325851854|ref|ZP_08171019.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A]
gi|325484696|gb|EGC87609.1| PPIC-type PPIASE domain protein [Prevotella denticola CRIS 18C-A]
Length = 474
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 84/258 (32%), Gaps = 45/258 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE--- 79
+ + + + ++ + TING+ ++ + +G +++ +V E
Sbjct: 5 ALLSVALLSATMAYGQADPTIMTINGQPVSRSEFEYSYN---KNNTDGVIDRKSVDEYVP 61
Query: 80 -LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-SSFLDKQGIGDNHFKQY 137
+ LK Q + + + F FL + Q
Sbjct: 62 LFVNYKLKVQAALDAHLD-------------------TLPAFRKEFLGYRN-------QQ 95
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ I V+++ Y + + +I AN + +L + + + +
Sbjct: 96 IRPAFITDADVEDEARKIYRDTKQQIDANGGL--------WHCAHILIGMGQHTSKEEEA 147
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQ 254
+++ D+ + L+ D L K S + G L + +F+ +L
Sbjct: 148 AARQLADSIYTALQRGADFANLAKRYSTDTSSAKNGGDLPRLQKGQTVAEFEKAMLTLKP 207
Query: 255 NNTTNPYVTQKGVEYIAI 272
T+ P ++ G I +
Sbjct: 208 GETSRPMLSPFGYHIIRM 225
>gi|319404585|emb|CBI78191.1| peptidyl-prolyl cis-trans isomerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 308
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 87/293 (29%), Gaps = 54/293 (18%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ + S + I+G+ IT G + ++A++ I L + E
Sbjct: 32 AAEKPVPLSHVIAVIDGKNITAGQLD----------------ELALE--INPNLVRVPDE 73
Query: 92 KSGITFDSNTVN-YFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K +T ++ + A GL E + + + + Q + ++V
Sbjct: 74 KRRVTVLKAYLDMQALAKAALQKGLDKTEAYDKRMA-------IMRDNILQQLYFKEMV- 125
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ K + +++ +K+ E R +L + V KR+ E
Sbjct: 126 ---VDKIADADVKALYDKEIAALPKEDEIKARHILVKTKE----EAEKVIKRLNKGESFE 178
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGV 267
KD G Y + F+ T P + G
Sbjct: 179 EIAKKDSTDG-------SSAVGGDLGYFSRGQMVKPFEEAAFNLKVGEYTKKPVESPFGW 231
Query: 268 EYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I I D+R + ++ K L Q + + LR + Y
Sbjct: 232 HVIKIEDRRLKQPPVFDDV--KDVLRTQLIREHYQTL----ITDLRGKINVEY 278
>gi|315641846|ref|ZP_07896850.1| peptidyl-prolyl cis-trans isomerase [Enterococcus italicus DSM
15952]
gi|315482521|gb|EFU73060.1| peptidyl-prolyl cis-trans isomerase [Enterococcus italicus DSM
15952]
Length = 341
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/254 (12%), Positives = 77/254 (30%), Gaps = 29/254 (11%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKIN 69
+K + +L + +++ + + SS T+ G IT D L
Sbjct: 2 GVLKNMKKKLILATLGLFSVMTLAACSSSSDETIATMKGNKITVSDFYAEAKL------T 55
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+++A +I + + +K G V+ + Q A+ G + F S L+ G
Sbjct: 56 SANQQLARNMIIYQAFE----DKYGDKVSQKQVDKQYNQTAKQYG---DSFESQLESAGY 108
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ +K+ + Q + + + A + + +
Sbjct: 109 TKDSYKKAIKQQLAM----EAGLKAHVKLTDADYKAA------WESFHPEVEAQIIQVAS 158
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ + A+ +++ K + K V+ + +++
Sbjct: 159 EDEAKEVKTEASKDGADFAKIAKEKSTDSTTKEDGG--KVTFDSTSTTIPAEVQ---AAA 213
Query: 250 LKKSQNNTTNPYVT 263
K ++P
Sbjct: 214 WKLKDGEISDPIAV 227
>gi|313207040|ref|YP_004046217.1| ppic-type peptidyl-prolyl cis-trans isomerase [Riemerella
anatipestifer DSM 15868]
gi|312446356|gb|ADQ82711.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Riemerella
anatipestifer DSM 15868]
gi|315022566|gb|EFT35593.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Riemerella
anatipestifer RA-YM]
gi|325335523|gb|ADZ11797.1| peptidylprolyl isomerase [Riemerella anatipestifer RA-GD]
Length = 455
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/318 (10%), Positives = 90/318 (28%), Gaps = 31/318 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
F + + K + I + E++ + DI ++ + Q
Sbjct: 9 FLLSFFITLLSFNAHAQLKPGDLVDGIAAVVGNEIVLESDIEQQENYARQQGAQTANRCE 68
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL--DKQGIGDNH 133
+++++ L E +K + + + + +K+ +
Sbjct: 69 FLEKVLSNKLLIYEAKK------DTLIENHSEAIKQQAEAKYNELLAQFPSEKELLAAYK 122
Query: 134 FK---------QYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
F+ + + + E+ N K + V++
Sbjct: 123 FRNSFEMKSAIEQIDTDQYYGQAKYQRITSGVNITPNEVTDFYNIYKGQLPMVKD---EI 179
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESR--LRLPKDCNKLEKFASKIHD--VSIGKAQYLL 238
L I + QK I + + + + K+ + S+ + G + +
Sbjct: 180 SLAKITLYPKLTKEHQQKLIDKLNQIKKDIEGGESFEKMARIYSEDPGSAATGGLYKNIA 239
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
+ + F L + + P ++ G I + + G + L T+
Sbjct: 240 KGAMVKAFEAAALNLQEGELSKPIESEFGYHLIQL--IKKSGKFYDARHILLKAEPNTEE 297
Query: 298 EKHEAEYVKKLRSNAIIH 315
+ + ++R I
Sbjct: 298 IAAAKKELNEIRK--QIE 313
>gi|254252159|ref|ZP_04945477.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa
AUO158]
gi|124894768|gb|EAY68648.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia dolosa
AUO158]
Length = 645
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 71/218 (32%), Gaps = 25/218 (11%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDAAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVREALMSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
QG+ +++ + + + + + Q++ + ++ +++++
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIISSAFTPKSL-----AQRLSELAAQQREVQSLVL 199
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
D + Q + + + ++
Sbjct: 200 KTSDYAAKVQPTDAQLAAYYDAHKQSFATPATATIQYL 237
>gi|225154955|ref|ZP_03723452.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae
bacterium TAV2]
gi|224804314|gb|EEG22540.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Opitutaceae
bacterium TAV2]
Length = 332
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 56/159 (35%), Gaps = 8/159 (5%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK-LQNQGFVQKRIKDAEESRLRLPKD 215
+++ + R+ + + + P + Q + R+ D ++ + D
Sbjct: 148 SEADLQAVYEANRAALTAPRQVRLAQIYIAAPRSADSATQDEARARLDDVKKKLAQKGAD 207
Query: 216 CNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY--- 269
L + S K + G+ +L + P+ + LK + P G
Sbjct: 208 FAALARVESDEKRSAANGGELGWLTDGQFRPEILDTLKNLAAGQVGEPLRLDDGWHILKA 267
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + + R L + ++ L+ + + + + ++ +L
Sbjct: 268 LEVREARPLTLDEV-RSQLAQRLRAERAQANRQTHLARL 305
>gi|189345807|ref|YP_001942336.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium limicola
DSM 245]
gi|189339954|gb|ACD89357.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium limicola
DSM 245]
Length = 701
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 4/110 (3%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR-LRLPKDCNKLEKFASKIH 227
K+ + E + R + N + + R + E R L+ + L K S+
Sbjct: 335 KVSKVVTGEPVARASHILLQFNPASREDVAKVRERMVEIYRKLQSGESFEALAKQYSQDS 394
Query: 228 DVSI--GKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
++ G + + P+F + T P T+ G+ I +
Sbjct: 395 GSAVKGGDIGWFGRKSVVPEFAEAVFSSRPGALTRPVQTKFGLHIIKVTG 444
Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 64/226 (28%), Gaps = 23/226 (10%)
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ F + A + L F I F + F G+L
Sbjct: 482 DQGFDKSAISEKLPVAKTGEFGKHTPIAAVGFNDKINA---------FAFKAAEGDLSEV 532
Query: 163 IPANKQ------KMKNITVREYLIRTV--LFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
I K KN T L + + + + + ++K++ +
Sbjct: 533 IETEKGFYVMRLTGKNDTGYRLLDDDLKKRITAELVREKKEAALEKQLASLSAKPGATLE 592
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
K S + I + P + + + P T G + +
Sbjct: 593 TIAAGNKAFSIVKADDIRWTDGYIPGYGIDRPLVEAISGMKSGLLSRPVKTTGGYALVRL 652
Query: 273 CDKRDLGGE---IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
DKR L G KA + K E+ AEY +R +A I
Sbjct: 653 -DKRVLAGGVDMKEAKAGILPNLLRAKQEQFFAEYFASVRKSAAIE 697
>gi|311067484|ref|YP_003972407.1| molecular chaperone lipoprotein [Bacillus atrophaeus 1942]
gi|310868001|gb|ADP31476.1| molecular chaperone lipoprotein [Bacillus atrophaeus 1942]
Length = 284
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 94/306 (30%), Gaps = 47/306 (15%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ I++ + + + + +T G++ +
Sbjct: 1 MKKMAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNM--------KKTAGAS 52
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +L+ E + +K ++ ++ G + +S+ ++ G +++ K
Sbjct: 53 VLTQLVQEKV---LAKKY--KVTDKEIDKKLKEYKTQLG---DQYSALKEQYG--EDYLK 102
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + + +++ + +++ K K +L
Sbjct: 103 EQVKYELLTQKAAEDNIKVTDDDVKEYWEGLKGK--------IHTSHIL----------- 143
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQF---QNLLK 251
K + E +L+ + L K S + G ++ + D + K
Sbjct: 144 -VADKDTAEEVEKKLKKGEKFEDLAKEYSTDSSANNGGDLGWISKDDTQLDATFSKAAFK 202
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLR 309
+ ++P TQ G I + + G +K L K+ A V+K+
Sbjct: 203 LKKGEVSDPVKTQFGYHIIK--NTEERGKYDDMKKDLKKDVKEQKLSDTSAVQAAVEKVI 260
Query: 310 SNAIIH 315
A I
Sbjct: 261 KKADID 266
>gi|206889870|ref|YP_002249039.1| foldase protein PrsA 1, putative [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741808|gb|ACI20865.1| foldase protein PrsA 1, putative [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 292
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 95/309 (30%), Gaps = 49/309 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K L + + IF + + + + S + +T ++ + I L Q
Sbjct: 1 MKYLKIFVIFTIFSL-----FFACSKSDEVVVKAGSSKLTKKELQEDIKSLPPQTKAFLA 55
Query: 73 EKIAVQELIVETLKKQ----EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
V L E +K++ E +K + + R
Sbjct: 56 SPEGVNRLKDELIKREVLYEEAKKKNLAKS--------EEFKRRM--------------- 92
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
FK+ I + +K + + + NK E + ++
Sbjct: 93 ---EEFKKITLINMLLEQEIKTLQQVTEQDAKEYYEKNKDMFIKPV--EVRLSQIVVK-- 145
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
N+ + + ++ K E S++ ++ K S G + + L+PQ +N
Sbjct: 146 -NEDEAKKVYERIDKGEEFSKIAKELSRDEKTK-------ASGGDIGFFKKGQLNPQIEN 197
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVK 306
+ + + P + + I D + + +K L Q K + Y+
Sbjct: 198 VAFSLRKGQVSMPLTFKGELYIFKITDVKGNPIDFEQIKGQLIEQLKAKKQQDWFNTYID 257
Query: 307 KLRSNAIIH 315
L+ +
Sbjct: 258 DLKKKHKVE 266
>gi|145640678|ref|ZP_01796261.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae R3021]
gi|145274604|gb|EDK14467.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae
22.4-21]
Length = 622
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/376 (10%), Positives = 110/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q V +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEVFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPD---------------------------- 189
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQY 258
Query: 190 ---NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKFASK-----IHDVSIGKAQYL 237
NK Q I+ A E ++ + A I + G ++
Sbjct: 259 YQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAKAKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
E++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKSF 394
>gi|221135500|ref|ZP_03561803.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Glaciecola sp.
HTCC2999]
Length = 626
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 55/169 (32%), Gaps = 20/169 (11%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M ++ L ++ +++ F + SY + + + +NGE I+ + +
Sbjct: 1 MLERMREGLQGPWAMIIVALIVLSFVFAGVGSYLASPVDTA-AAKVNGEDISARALDQAY 59
Query: 59 ---RIALLKLQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
R L + ++ L+ + L +Q+ + G+ +
Sbjct: 60 QNERARLESQFGEGISSLFANPEYLANFRQGILERLVADKLVEQKAQALGLRVSDTQIKD 119
Query: 105 ---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + + + L + G + F+ Y+ + +
Sbjct: 120 TILSMPEFQVGGVFNNDRYLAVLRQAGFQVDDFRNYMRNTMTKEQLSRA 168
>gi|288929625|ref|ZP_06423469.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 317
str. F0108]
gi|288329130|gb|EFC67717.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 317
str. F0108]
Length = 474
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 92/294 (31%), Gaps = 46/294 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ + ++ + A TING ++ + K ++
Sbjct: 5 ALSVALMFCAFVAHAQDDPTIMTINGRPVSRSEFEY------------SYNKNNTDNVVD 52
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQ 141
+ Q +V+ N L E ++ LD N F Y Q
Sbjct: 53 KKTVAQ-----------------YVELFVNYKLKVEAALAARLDTTQAFRNEFADY-RDQ 94
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ P V ND + K + + + + +R + ++ +P ++ ++
Sbjct: 95 QVRPSFVNNDDVDKAARQLYDDTKQRIEGQGGLIR---VAHIMLLLPQKSAKDLQRRAEQ 151
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
D+ + L+ D L + S + G+ +L + +F++ +
Sbjct: 152 RIDSIYNALKRGADFAALARKLSDDKGSAQQGGELPWLQKGQTLKEFEDAAFALKPGEIS 211
Query: 259 NPYVTQKGVEYIAICDKR------DLGGEIAL---KAYLSAQNTPTKIEKHEAE 303
P ++ G I + ++R + +I + + Q K+ +
Sbjct: 212 KPLLSPAGYHIIKMIERRSFLPYDSVKADIFAYIEQTNMREQIIDNKLNELAKA 265
>gi|229843938|ref|ZP_04464079.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae 6P18H1]
gi|229812932|gb|EEP48620.1| peptidyl-prolyl cis-trans isomerase [Haemophilus influenzae 6P18H1]
Length = 622
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/376 (10%), Positives = 110/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q V +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEVFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPD---------------------------- 189
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQY 258
Query: 190 ---NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKFASK-----IHDVSIGKAQYL 237
NK Q I+ A E ++ + A I + G ++
Sbjct: 259 YQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAKAKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
E++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|305664741|ref|YP_003861028.1| putative exported peptidyl-prolyl cis-trans isomerase [Maribacter
sp. HTCC2170]
gi|88707863|gb|EAR00102.1| putative exported peptidyl-prolyl cis-trans isomerase [Maribacter
sp. HTCC2170]
Length = 483
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 81/292 (27%), Gaps = 24/292 (8%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITF 97
I + VI + DI K + LK Q E + +L+ + L + + +
Sbjct: 60 DGIAAVVGDYVILESDIEKTLIDLKSQGAMTEDITRCGLLGKLMEDRLYAHQAVQDSLLV 119
Query: 98 DSNTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL----AIQSIWPDVVK 149
+ V G S F K+ + ++ + ++ + + ++
Sbjct: 120 SDDEVSLTTERQIQSFVAQMG-SMAKLLKFYKKEN--EASLREDINKINKLRML-SEKMQ 175
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + + E+ K+ + + I + QK I +
Sbjct: 176 SSIVSEIEITPEEVRQFFNKIPEDERPVFGAEMEISQIVKQPKATEIEKQKVIDKLSAIK 235
Query: 210 LRLPKDCNKLEKFASKIH-DVSIGKAQYLLESDLHPQFQNLLKK-----SQNNTTNPYVT 263
+ + K A D F K + + P+ T
Sbjct: 236 ADVEDNDAKFSVKAILYSQDPGSKSKGGFYSITKDTGFDKTFKDVAFSMQEGAVSEPFET 295
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I I R G E+ L+ L + + +R I
Sbjct: 296 MFGFHLIYIEKIR--GQELDLRHILITPEISQESLDEAKTELDSIRK--HIE 343
>gi|119897859|ref|YP_933072.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72]
gi|119670272|emb|CAL94185.1| putative peptidyl-prolyl cis-trans isomerase [Azoarcus sp. BH72]
Length = 631
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 43/395 (10%), Positives = 99/395 (25%), Gaps = 109/395 (27%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING 70
+ + ++I F + +Y ++G IT + D + R +L+ G
Sbjct: 11 VAQIILALLIIPFAFFGLDAYFKDGPGGGEVAVVDGAPITAAEFDRALRERQDRLRNEMG 70
Query: 71 -----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV------------ 107
L + ++ ++ + L + + +
Sbjct: 71 GPVDSALLESPALRRAVLETMVSQRLLARYAADRHMVVTPQQLQETIAAVEAFHENGQFS 130
Query: 108 -----QHARNTGLSAEDFSSFLDK--------QGIGDNHF------KQYLAIQSIWPDVV 148
R ++ F + L + IG+ F K++L Q +V
Sbjct: 131 LQRYQDVLRAQNMTPAGFEARLAQDVRIQQLAASIGEAAFTPAASAKRFLLAQLEEREVR 190
Query: 149 KNDF-----------------------------------------------MLKYGNLEM 161
+ F +K + E+
Sbjct: 191 ELRFPASRYLGEVKLADGAAQAFYDANAAGFEQPARLKAEYVVLDEAALAKQVKVSDEEV 250
Query: 162 EIPANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + E R +L + + I + + + P L
Sbjct: 251 RAFYDGNPGRFGQPEERRARHILIQVDAGAPEAEVAKAKAAIDEIAATLAKDPGRFEALA 310
Query: 221 KFASKIHD--VSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
K +S+ G + + F++ +++ + G I + D +
Sbjct: 311 KASSQDSGSAARGGDLGFFGRGAMVKPFEDAAFGQAKGVVGPVVRSDFGFHIIQVTDIKP 370
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
++ E V +LR A
Sbjct: 371 ATTRS--------------LDSVRGEIVDELRKQA 391
>gi|298373303|ref|ZP_06983292.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroidetes oral
taxon 274 str. F0058]
gi|298274355|gb|EFI15907.1| peptidyl-prolyl cis-trans isomerase, PPIC-type [Bacteroidetes oral
taxon 274 str. F0058]
Length = 448
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 82/277 (29%), Gaps = 23/277 (8%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEK 74
++ I C + S + + + + I ++ ++ + + G+
Sbjct: 3 RLTIIITILCSLSAASAQKRVI-DGVVWIVGENSILRSEVEEQRQMANYNGVKFDGDPNC 61
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTV--------NYFFVQHARNTGLSAEDFSSFLDK 126
+ +++ V+ L + I + V N + + L E F +++
Sbjct: 62 LIAEQIAVQQLFLHQASLDSIVANEGQVSTRVNMQINQYIAEIGSQEKLE-EYFKKSINE 120
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
I + F+ + Q + V+ + E+ + MK ++ +
Sbjct: 121 --IREELFEA-IKRQMV-VQEVQQKIIGNNKMSPSEVRKFFESMKPDSIPTMPATVEVQV 176
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESD 241
I ++ + R+ K A + G +
Sbjct: 177 IRLEPNITDAQREEVKNRLRDLAERVNKGNADFTMLARLYSEDEGTSKQGGSLGFFGRGM 236
Query: 242 LHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKR 276
+ P+F N+ + T G I + +K+
Sbjct: 237 MEPEFSNVAFDLHEPGKVSRVVETIYGYHIIQLVEKK 273
>gi|170692414|ref|ZP_02883577.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
graminis C4D1M]
gi|170142844|gb|EDT11009.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
graminis C4D1M]
Length = 646
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 72/238 (30%), Gaps = 25/238 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + ++ V I ++ + S ++NG IT + D + R L
Sbjct: 5 FRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDNAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ +++ G E + LI + + E ++ +T + V +
Sbjct: 65 RARQMLGAQFDIKAFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + + + L QG+ + + + + +
Sbjct: 125 SSLKNPDGSIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQL-----PAAIQGSAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAEQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQYL 237
>gi|167644889|ref|YP_001682552.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter sp. K31]
gi|167347319|gb|ABZ70054.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caulobacter sp. K31]
Length = 330
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 49/289 (16%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKL------QKINGELEKIAVQELIVETLKK 87
+ ++G + D+ + L I +L + + E++ + L
Sbjct: 32 RPPEPGDTAVARVDGHTVWASDVKREAVAQGLISEGEPLDIGSDLFRQRLDEVVDQKLLA 91
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
E K + D A+ ++ + + +V
Sbjct: 92 AEALKQKLDKDP---------VAQR-----------------RLAAARERILGDMLVENV 125
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
V+ + A +QK+ + E R +L + ++ + + A
Sbjct: 126 VEKAVNENAI---RGLYAEQQKLSKRSE-EIRARQILVA---SQADGEAVKKLLAAGASF 178
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266
L + + + +F + G Y + + LK +Q P+ T+ G
Sbjct: 179 DALAMERSTDPATRF-------NGGDLGYFTVDVMPAAYAVALKDAQKGALVGPFQTEGG 231
Query: 267 VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + DKR L I L+A Q + ++KLR A +
Sbjct: 232 WAVLRVEDKR-LEEPITLEAA-RPQIVRFLTYDQVRDLLEKLRGAAKVE 278
>gi|89097668|ref|ZP_01170556.1| hypothetical protein B14911_14772 [Bacillus sp. NRRL B-14911]
gi|89087527|gb|EAR66640.1| hypothetical protein B14911_14772 [Bacillus sp. NRRL B-14911]
Length = 251
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 58/181 (32%), Gaps = 15/181 (8%)
Query: 39 SSRIRTTINGEVITDGDIS---KRIALL--------KLQKINGELEKIAVQELIVETLKK 87
+N + I D + + + ++ + ++++ + L+ ++L
Sbjct: 60 EKETVAVVNDDKILGKDFNGMLQNAQMSYQMSGQDPTTKEASEQIKQQTIDSLVGQSLIM 119
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
QE + G V + + + F++ L G+ + K ++ +
Sbjct: 120 QEAAEKGYKASEEEVQGQLDEIKKQYEGDDKKFAAALKDAGLTEEELKGQISDSIVSNKY 179
Query: 148 VKNDFMLKYGNLEMEIPANKQ----KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + E Q + +V EY N + Q + K+++
Sbjct: 180 IDKEIKADAATEEEVKAYYDQVKASTPEGQSVPEYEEIKTKIQEQLNDQKKQEVLVKQVE 239
Query: 204 D 204
D
Sbjct: 240 D 240
>gi|256027747|ref|ZP_05441581.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. D11]
Length = 563
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 43/128 (33%), Gaps = 2/128 (1%)
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A ++I + L + + S+ V+ + + + G E F L +G+ + K
Sbjct: 82 AFNDVIDKNLTLHIAKDLKVKVPSSEVDKQYEELESSMG-DKEQFRRMLQVRGLTKDSLK 140
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +F + EI ++ + S N+ +
Sbjct: 141 NQIEENLLMQK-TREEFAKNINPTDEEINTYMALYSIPADKKEEAVNLYKSEKGNEAFRE 199
Query: 196 GFVQKRIK 203
++ R +
Sbjct: 200 ALLKARKE 207
>gi|329123025|ref|ZP_08251596.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC
11116]
gi|327471956|gb|EGF17396.1| peptidyl-prolyl cis-trans isomerase [Haemophilus aegyptius ATCC
11116]
Length = 622
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/376 (10%), Positives = 110/376 (29%), Gaps = 94/376 (25%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLSAEDFSSFLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYG 157
+ + L+++ ++S L + G+ ++ F + Q V +
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEF--IVPAQVKNSAEVFFQKRLARLAT 198
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPD---------------------------- 189
+ A + + Y F P+
Sbjct: 199 LSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQY 258
Query: 190 ---NKLQNQGFVQKRIKDAEESRLRLP----KDCNKLEKFASK-----IHDVSIGKAQYL 237
NK Q I+ A E ++ + A I + G ++
Sbjct: 259 YQDNKAQFMTQHLAHIQFANEQDAKVAYEELQKGANFADVAKAKSLDKISGENGGDLGWV 318
Query: 238 LESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYL 288
E++L F++ Q + P + + +++ ++ K+ +
Sbjct: 319 NENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLM 378
Query: 289 SAQNTPTKIEKHEAEY 304
++ + + + +
Sbjct: 379 ESRYFSLEKQASDKAF 394
>gi|322614730|gb|EFY11659.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618836|gb|EFY15724.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623543|gb|EFY20382.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629158|gb|EFY25937.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631879|gb|EFY28633.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637384|gb|EFY34086.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642069|gb|EFY38679.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647888|gb|EFY44363.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322653272|gb|EFY49605.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660579|gb|EFY56815.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664731|gb|EFY60924.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669216|gb|EFY65366.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670761|gb|EFY66894.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322679000|gb|EFY75055.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682029|gb|EFY78054.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685142|gb|EFY81139.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192964|gb|EFZ78187.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196954|gb|EFZ82096.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203939|gb|EFZ88956.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323206976|gb|EFZ91929.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323214179|gb|EFZ98937.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214497|gb|EFZ99248.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323219161|gb|EGA03658.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227003|gb|EGA11184.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230179|gb|EGA14299.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233917|gb|EGA18006.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238389|gb|EGA22447.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244076|gb|EGA28085.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246237|gb|EGA30220.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251863|gb|EGA35726.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257859|gb|EGA41538.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261127|gb|EGA44719.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264943|gb|EGA48442.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272506|gb|EGA55913.1| periplasmic folding chaperone [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 623
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 72/236 (30%), Gaps = 19/236 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQ 127
L + + LI E L Q + + V F A + +++ +++
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ + + Q L Q ++ + + ++ + ++ ++R + +
Sbjct: 146 GMTADQYAQALRNQLTTQQLING-----VAGTDFMLKGETDELAALVSQQRVVREAVIDV 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ Q Q+ ++++ R + A + Q
Sbjct: 201 NALAAKQQVTDQEVSSYYDQNKARFMTPEQFRVSYIKL-------DAATMQAPVSDADIQ 253
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + T P + + I K + + L A ++ T ++ +
Sbjct: 254 AYYDQHVDQFTQPERIRYSI----IQTKTEDDAKAVLDALNKGEDFATLAKEKSTD 305
>gi|315607433|ref|ZP_07882429.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574]
gi|315250865|gb|EFU30858.1| peptidyl-prolyl cis-trans isomerase [Prevotella buccae ATCC 33574]
Length = 490
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 72/244 (29%), Gaps = 18/244 (7%)
Query: 48 GEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
E I D+ + L + +G+ + +++ V+ L + I + V
Sbjct: 73 DEPILKSDVEVMRLQGLAEGITFSGDPDCSIPEQIAVQKLFLHQAAIDSIEVSESEVAQG 132
Query: 106 FV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---KNDFMLKYGNL 159
S E + + +Q + ++ + +
Sbjct: 133 IEGQINSWIQMTGSREKLEEYRKQ---SITQMRQQMHDDYRNRLLIQKMRMKLVEDVKVS 189
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD---C 216
++ A + M ++ + + +Q + + + R+ K
Sbjct: 190 PAQVRAYFRDMPADSLPFVPTEVEVEILTSQPKISQEEINRVKDELRNYTDRVNKGETTF 249
Query: 217 NKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAI 272
+ L + S+ + G+ Y L P F N+ + ++ G I +
Sbjct: 250 STLARLYSEDPGTARMGGELDYTGRGMLDPAFANVAFNLTDPKKISKIVESEFGYHIIQL 309
Query: 273 CDKR 276
DKR
Sbjct: 310 IDKR 313
>gi|260494276|ref|ZP_05814407.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_33]
gi|260198422|gb|EEW95938.1| peptidylprolyl isomerase [Fusobacterium sp. 3_1_33]
Length = 563
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 43/128 (33%), Gaps = 2/128 (1%)
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A ++I + L + + S+ V+ + + + G E F L +G+ + K
Sbjct: 82 AFNDVIDKNLTLHIAKDLKVKVPSSEVDKQYEELESSMG-DKEQFRRMLQVRGLTKDSLK 140
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ + + +F + EI ++ + S N+ +
Sbjct: 141 NQIEENLLMQK-TREEFAKNINPTDEEINTYMALYSIPADKKEEAVNLYKSEKGNEAFRE 199
Query: 196 GFVQKRIK 203
++ R +
Sbjct: 200 ALLKARKE 207
>gi|270295713|ref|ZP_06201913.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273117|gb|EFA18979.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 520
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 99/311 (31%), Gaps = 56/311 (18%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++L +F L V A + ING+ + + + G
Sbjct: 5 VRLFWVFFFLGFGLAVS-------AQDDPVLMRINGKEVFRSEFERSYNKGGTSVGAGRK 57
Query: 73 EKIA-VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
A V + I LK + E +G+
Sbjct: 58 ALDAYVNKFIDFRLKIEAAEVAGL------------------------------------ 81
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPD 189
+ + + Q + + ++ E E KMK+ R Y ++ + +P
Sbjct: 82 DTSRVFQKEQDEYRRCLIKSYLTDEETAEQEARQYYDKMKSGRRAGRVY-VKHIFKYLPQ 140
Query: 190 N-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
N ++ R+ + + + + D KA ++ + +F++
Sbjct: 141 NISGHTLREMESRMDSIYRALAKEGGAVPSFDACVEQFSD--EKKAFWVGWLQMPVEFED 198
Query: 249 LL-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ + + P++T +G+ + + +++++ E + Q ++K +V
Sbjct: 199 IVFGLNAGEISRPFLTPQGIHIVKVLEQQEILPFERMKDKIIRCQTRRHGMDKGTRAFVD 258
Query: 307 KLRSNAIIHYY 317
KL+ Y+
Sbjct: 259 KLKK----EYH 265
>gi|255011715|ref|ZP_05283841.1| putative exported isomerase [Bacteroides fragilis 3_1_12]
gi|313149550|ref|ZP_07811743.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12]
gi|313138317|gb|EFR55677.1| peptidyl-prolyl cis-trans isomerase [Bacteroides fragilis 3_1_12]
Length = 517
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 88/308 (28%), Gaps = 61/308 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ V + C+ ++ +A + ING+ I+ + + K +G K
Sbjct: 1 MKKILVGALTCLFGFIA--GYARQDPVLMRINGQDISRSEFE---SFYHRNKPSGVSGKE 55
Query: 76 AV----QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
A+ + + LK +++G+
Sbjct: 56 ALKVCVDLFVDKKLKLHAAQRAGL------------------------------------ 79
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK----QKMKNITVREYLIRTVLFSI 187
+ + + + ++ + E + Q E + + +
Sbjct: 80 DTLSAF-RAEM--DNYHRSLSKSYLTDSSAEEACARKLYDQMKSRSISGEVRVMHIFRYL 136
Query: 188 PDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
P L + + + D+ + D L S S ++ +
Sbjct: 137 PQTALPHHLREAQALMDSLYNVLKTNPDTDFRTLVDQYSDDKAES-----WISWLQTPQE 191
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAE 303
F+ + + P+ T KG+ + + +R+L E + + +K
Sbjct: 192 FEEVAFSLKDGEYSQPFFTPKGLHIVKVTGRRELPPFEQIRDRLIRKLSYRPGADKGTEI 251
Query: 304 YVKKLRSN 311
V KL+ +
Sbjct: 252 LVNKLKES 259
>gi|167033456|ref|YP_001668687.1| SurA domain-containing protein [Pseudomonas putida GB-1]
gi|166859944|gb|ABY98351.1| SurA domain [Pseudomonas putida GB-1]
Length = 213
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 48/144 (33%), Gaps = 7/144 (4%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L A+ ELI + L QE ++ GI V+ + G S F L + G
Sbjct: 62 LRDQALDELIDKELLWQEAQRQGIAVSDERVSAHVGEVEAAFG-SPAVFERRLAEAGFDR 120
Query: 132 NHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANK---QKMKNITVREYLIRTVLF 185
+ +Y V + G +E ANK Q +N + +IR
Sbjct: 121 AQYTEYTRQDMAAQQVYAQLSAVDAPSQGEVEAFYDANKERLQGAQNQSDNPSVIREQGL 180
Query: 186 SIPDNKLQNQGFVQKRIKDAEESR 209
+ L Q Q R + R
Sbjct: 181 VLARATLIGQREAQARQSVRQRLR 204
>gi|260909468|ref|ZP_05916172.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472
str. F0295]
gi|260636393|gb|EEX54379.1| peptidyl-prolyl cis-trans isomerase [Prevotella sp. oral taxon 472
str. F0295]
Length = 474
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 94/305 (30%), Gaps = 47/305 (15%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ + ++ + A TING I+ + K ++
Sbjct: 5 ALSVALLFCAFVAHAQDDPTIMTINGRPISRSEFEY------------SYNKNNTDNVVD 52
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQ 141
+ Q +V N L E ++ LD N F Y Q
Sbjct: 53 KKTVAQ-----------------YVDLFVNYKLKVEAALAARLDTTQAFRNEFADY-RDQ 94
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ P V +D M K + + + +R + ++ +P + +
Sbjct: 95 QVRPSFVTSDDMEKAARQLYDDTRQRVDGQGGLIR---VAHIMLMLPQKASKEAQNRAEL 151
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
D+ + L+ D L + S + G+ +L + +F++ +
Sbjct: 152 RIDSIYNALKRGADFATLARKLSDDKGSAQQGGELPWLQKGQTLKEFEDAAFALKPGEIS 211
Query: 259 NPYVTQKGVEYIAICDKR------DLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKLR 309
P ++ G I + ++R + +I ++ + Q K+ + + R
Sbjct: 212 KPVLSPAGYHVIKLIERRMFLPYDSVKADILAYIEQSGMREQIIDNKLNEMAKA-LGTTR 270
Query: 310 SNAII 314
+ A +
Sbjct: 271 TTADV 275
>gi|325982743|ref|YP_004295145.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp.
AL212]
gi|325532262|gb|ADZ26983.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosomonas sp.
AL212]
Length = 627
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 16/128 (12%)
Query: 39 SSRIRTTINGEVITDGDISK-------RIA------LLKLQKINGELEKIAVQELIVETL 85
S + GE I+ + + R+ E+ ++ LI + L
Sbjct: 36 SEGYVAVVEGEEISRREYEQALRDHHERMRAMLGANFDSAMLDTSEVRSSVLERLIQQRL 95
Query: 86 KKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
QE K+G + + +N S + + L QG+ F+ + +
Sbjct: 96 LYQEAVKNGFVVLDSQLIKTIQDVQAFQKNNKFSKQQYEELLRNQGLTPVIFESRVRNEL 155
Query: 143 IWPDVVKN 150
+ ++
Sbjct: 156 LLQQLLDG 163
>gi|88810611|ref|ZP_01125868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis
Nb-231]
gi|88792241|gb|EAR23351.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrococcus mobilis
Nb-231]
Length = 645
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 53/136 (38%), Gaps = 5/136 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+R +L +P + Q+Q V + +A R+ +L + S+ + G ++
Sbjct: 271 VRHILIKLPKDASQHQIEVARGQIEALRERIVQGASFAELAQRQSQDVGSARQSGDLGFV 330
Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+ ++ + K T+ P ++ G I + R G + + + +Q
Sbjct: 331 RQGEMAKAIDEAAFKLPIGETSEPIRSRFGWHLIEVTASR--AGGVKPFSEVESQIRQEL 388
Query: 297 IEKHEAEYVKKLRSNA 312
+++ + KL + A
Sbjct: 389 LKQQSGKRFYKLSNQA 404
>gi|205351763|ref|YP_002225564.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205271544|emb|CAR36362.1| peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326626798|gb|EGE33141.1| Peptidyl-prolyl cis-trans isomerase D [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 623
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 74/289 (25%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNLLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREAVIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y V F P+ + + A S
Sbjct: 206 KQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHVDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R+R K E A + D + G +L ES P
Sbjct: 266 PERIRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDIQPAKVKPLSEVRDDIAAK 374
>gi|168237567|ref|ZP_02662625.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737891|ref|YP_002113483.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194713393|gb|ACF92614.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289587|gb|EDY28950.1| peptidylprolyl isomerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 623
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 72/236 (30%), Gaps = 19/236 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQ 127
L + + LI E L Q + + V F A + +++ +++
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ + + Q L Q ++ + + ++ + ++ ++R + +
Sbjct: 146 GMTADQYAQALRNQLTTQQLING-----VAGTDFMLKGETDELAALVSQQRVVREAVIDV 200
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ Q Q+ ++++ R + A + Q
Sbjct: 201 NALAAKQQVTDQEVSSYYDQNKARFMTPEQFRVSYIKL-------DAATMQAPVSDADIQ 253
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + T P + + I K + + L A ++ T ++ +
Sbjct: 254 AYYDQHVDQFTQPERIRYSI----IQTKTEDDAKAVLDALNKGEDFATLAKEKSTD 305
>gi|171915197|ref|ZP_02930667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verrucomicrobium
spinosum DSM 4136]
Length = 351
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/326 (9%), Positives = 90/326 (27%), Gaps = 47/326 (14%)
Query: 20 FVLIIFCIVPIVS-----YKSWAMSSRIRTTIN----GEVITDGDISKRIALLKLQKI-- 68
L++ ++ V+ + A +R+ + + IT +++ + L ++
Sbjct: 20 VALVMVALIASVAAYWWHLQDQAHEARVVARVGPATATQEITRHQVAEALRSLLWRRSET 79
Query: 69 --------NGELEKIAVQELIVE-TLKKQEIEKSGIT---FDSNTVNYFFVQH----ARN 112
+ A+ L+ L + + G + + F Q +
Sbjct: 80 WESLSPQLQQQRRLEALDSLVSSHALHLWALTQPGNEHPTAAEDALQTFIKQFEIPDSWR 139
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ + + + + +Q LA + + + + Q +
Sbjct: 140 QRSKLQQMNEAQLQAWVEEET-RQRLAFDAEMSRRMARVTPDEIKAWLRDHATEVQIPER 198
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-----KIH 227
++ + + R + R+ L A
Sbjct: 199 LSASHVFLS-----------GHDKDKPDRTAEITAYHRRIIAGETTLSALAGEVSEDGRS 247
Query: 228 DVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--L 284
+ G + + F + + P+ T+ G + + KR
Sbjct: 248 NKLGGSLGWFSRDRVPANFAEKAFAQKVGELSAPFRTELGWHIVLVHAKRPARPATLEEA 307
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRS 310
+A ++A T + A+ +++
Sbjct: 308 QAEVAAHLTSVRRSAESAKLKEEILK 333
>gi|77918655|ref|YP_356470.1| peptidyl-prolyl cis-trans isomerase [Pelobacter carbinolicus DSM
2380]
gi|77544738|gb|ABA88300.1| peptidyl-prolyl cis-trans isomerase [Pelobacter carbinolicus DSM
2380]
Length = 649
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 51/395 (12%), Positives = 103/395 (26%), Gaps = 100/395 (25%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIA------LLKLQ 66
+ FV IF + + S S I +NG+ I+ D + + +
Sbjct: 21 IIAAFVGTIFLVWGKGNSGSGGDGSAI-AHVNGDAISYQDFQITYQNMRQEMEKRFGRSL 79
Query: 67 ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAED 119
+ +L A ++L+ L QE + I D + + ++ +
Sbjct: 80 PPEIEKQLQLNTQAYEQLVNRLLLLQEADNRDIAVDKDELRQAIADIPAFQKDGQFDRKR 139
Query: 120 FSSFLDKQGIGDNHF----KQYL-----------------------------AIQSIWPD 146
+ L Q + F ++ L I +
Sbjct: 140 YQEVLAYQHLTSRAFERNMREQLLLGKVVEAIKQDAEVTDQDIDHEYRNRNEKIDLAFVK 199
Query: 147 VVKNDFMLKYGNLEMEIPA----------------------------------------- 165
+ + K + + A
Sbjct: 200 LAPGRYESKVTVTDEALQAYFQENREDFRQPEKIALRFVRFDPDNVAKDISVDDAAIQDY 259
Query: 166 -NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+K K + + +LF I ++ ++ + R KD +L + S
Sbjct: 260 YDKHKDQYWVEEQVKASHILFRITAGLDEDGRQKKRAAAQKVLEQARAGKDFAQLARTHS 319
Query: 225 KIHDVSI--GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+I G Y + P F+N+ ++ T G I C+ R
Sbjct: 320 DDAGSAIKGGALGYFTHGSMVPDFENVAFALKPGQISDLVETSMGYHIIK-CEGRIEAQT 378
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
L + E + + A++ Y
Sbjct: 379 KPLDDVRDDVRANLRKELARQDALD----KAMMAY 409
>gi|330817266|ref|YP_004360971.1| Peptidyl-prolyl cis-trans isomerase D [Burkholderia gladioli BSR3]
gi|327369659|gb|AEA61015.1| Peptidyl-prolyl cis-trans isomerase D [Burkholderia gladioli BSR3]
Length = 646
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 74/218 (33%), Gaps = 25/218 (11%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V + ++ + S +++G IT + D + R + + ++ G E
Sbjct: 25 GFVGVQGFRDFFDDSANVASVDGHKITRAEFDGAYRQQIDQARQALGANFDAKQFDTPER 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
+ + +I + E+ + +T N V + A + AE ++ L
Sbjct: 85 RQQLLDGIIEQRALTDEVRRLHLTASDNAVREALMSNPIIASLRKPDGSIDAERYTQLLA 144
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
QG+ + +++ + Q + N + + Q++ ++ ++ I+ ++
Sbjct: 145 MQGMTPDQYQESVRYQLSQSQLPNNLINSAFTPRSV-----AQRLTDLAQQQREIQAMVL 199
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
D + Q + + + ++
Sbjct: 200 KPADYAAKVQPTDAQLSAYYDAHKQAFATPETASIQYL 237
>gi|288924571|ref|ZP_06418508.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella buccae D17]
gi|288338358|gb|EFC76707.1| peptidyl-prolyl cis-trans isomerase, PPIC [Prevotella buccae D17]
Length = 457
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 72/244 (29%), Gaps = 18/244 (7%)
Query: 48 GEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
E I D+ + L + +G+ + +++ V+ L + I + V
Sbjct: 40 DEPILKSDVEVMRLQGLAEGITFSGDPDCSIPEQIAVQKLFLHQAAIDSIEVSESEVAQG 99
Query: 106 FV---QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---KNDFMLKYGNL 159
S E + + +Q + ++ + +
Sbjct: 100 IEGQINSWIQMTGSREKLEEYRKQ---SITQMRQQMHDDYRNRLLIQKMRMKLVEDVKVS 156
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD---C 216
++ A + M ++ + + +Q + + + R+ K
Sbjct: 157 PAQVRAYFRDMPADSLPFVPTEVEVEILTSQPKISQEEINRVKDELRNYTDRVNKGETTF 216
Query: 217 NKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAI 272
+ L + S+ + G+ Y L P F N+ + ++ G I +
Sbjct: 217 STLARLYSEDPGTARMGGELDYTGRGMLDPAFANVAFNLTDPKKISKIVESEFGYHIIQL 276
Query: 273 CDKR 276
DKR
Sbjct: 277 IDKR 280
>gi|226227335|ref|YP_002761441.1| peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27]
gi|226090526|dbj|BAH38971.1| peptidyl-prolyl cis-trans isomerase [Gemmatimonas aurantiaca T-27]
Length = 610
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 93/333 (27%), Gaps = 67/333 (20%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKING-- 70
++ + + ++ ++ ++ T+NGE I T + + Q+ +G
Sbjct: 16 IIVAFVGSFLLYETSGLAGRAPVTTTTSIATVNGEEILLTTWQNAVNSLEQQQQQQSGRG 75
Query: 71 -------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF----------------- 106
+LE A E++ E L +QE ++ GIT V
Sbjct: 76 VTLDERQQLEDRAFDEIVTEILLQQEYKRRGITVTDEEVVQAARVSPPPQATSSPDLQTD 135
Query: 107 -------------VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI------QSIWPDV 147
AR +G+ A + I +A + +W
Sbjct: 136 GKFDMQKYLRLLSSPMARQSGMLAG--LEAFYRNEIPKQKLFDQVASGAYVSDERLWQVY 193
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYL----------------IRTVLFSIPDNK 191
+ + A +T E I ++L
Sbjct: 194 RDRHDSAAVSFVVLRTDALTDTSVTVTDAEISQFYDRNKKRYERPGRAIVSLLTVPRTVT 253
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN-L 249
+ RI + K + ++ ++ + G + P+F+
Sbjct: 254 AADSAAAHTRIDQIRAEIVGGAKFEDVAKRESTDSLSGAQGGALGKGGRNRFTPKFEEAA 313
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ P +T G I + D++ ++
Sbjct: 314 YALKVGELSQPVLTPFGWHIIRVDDRKGDTLDL 346
>gi|91788924|ref|YP_549876.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
gi|91698149|gb|ABE44978.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
Length = 643
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 56/200 (28%), Gaps = 5/200 (2%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
A + D F + +I+ + DV + +++
Sbjct: 201 ADFAAKLSPTDADLDQFYKANEKLFQA-PEQASIEYVMLDVETVRKSITINEADLKTYYE 259
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASK 225
+ + E +L + P + K + + ++ P + + S+
Sbjct: 260 QNLQRLSGAEERRASHILITSPKTASAEERQKAKAKAEELLAAVKKSPDTFADVARKNSQ 319
Query: 226 IHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
S G + + F++ + + + + ++ G I + D +
Sbjct: 320 DPGSAPSGGDLDFFARGAMVKPFEDAVFSMKKGDISAVVESEFGYHIIRLTDIKAPKQRS 379
Query: 283 ALKAYLSAQNTPTKIEKHEA 302
+ + K + +
Sbjct: 380 FEEMKPELEADLKKQQAQKK 399
>gi|332970309|gb|EGK09301.1| peptidyl-prolyl cis-trans isomerase [Kingella kingae ATCC 23330]
Length = 610
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 50/159 (31%), Gaps = 11/159 (6%)
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDN-----KLQNQGFVQKRIKDAEESRLRL 212
+ E+ A + + I +L P + + + + ++ K+A+ + +
Sbjct: 230 VSDAEVQAALKDAQANAKPTRKIAHILIEAPKSADEATRSKAKAQAEQVAKEAQAAPEKF 289
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLE-SDLH-PQFQNL-LKKSQNNTTNPYVTQKGVEY 269
+ + A S G+ + L P + K + + T G
Sbjct: 290 ADLAKQYSQDAGSAQ--SGGELGNFAKDGSLPAPALEEAAFKLGEGEVSGVVETDFGYHI 347
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + D + + + + K ++ + +L
Sbjct: 348 VRVTDIQAIDVAALTERVRR-ELQEKKAQQAYNKMRDEL 385
>gi|291616553|ref|YP_003519295.1| PpiD [Pantoea ananatis LMG 20103]
gi|291151583|gb|ADD76167.1| PpiD [Pantoea ananatis LMG 20103]
Length = 646
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 85/315 (26%), Gaps = 82/315 (26%)
Query: 43 RTTINGEVITDGDISK-------RIA------LLKLQKING---ELEKIAVQELIVETLK 86
+NG+ I+ + + R +L +G ++ + A+ +LI + L
Sbjct: 65 AAKVNGQEISRAQLDQAFNSERNRQQQMLGDQFSQLAGNDGYMQQMRQQALSQLIDQALL 124
Query: 87 KQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
I+ I + V N +++ + G + + + L Q
Sbjct: 125 DSYIKDLHIAISDDQVKQAIFNQAAFQTNGKFDNAKYNAMIGNMGFTADQYAEALRKQLA 184
Query: 144 WPDVVKN---------------------DFMLKYGNLEMEIPANKQKMKNITVREY---- 178
++ ++ L++ A KQ + + + +Y
Sbjct: 185 TQQLINAIANTDFMLKNETSKLVDLVAQKRDIQTATLDVNALAAKQTVNDDEINQYYQQH 244
Query: 179 --------LIRTVLFSIPDNKLQNQG--------------------------FVQKRIKD 204
R + +Q K D
Sbjct: 245 KNSFMAPEQFRVSYIKLDAAGMQENASDADIQAWYDQHKADYTQPQRDRYSVIQTKTEAD 304
Query: 205 AEE--SRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A ++L+ D +L K S I G +L S + +N K + +
Sbjct: 305 ANAILAQLKSGADFAELAKTKSIDPISARKGGDMGWLEPSTTPDELKNAGLKEKGQLSGV 364
Query: 261 YVTQKGVEYIAICDK 275
+ G + D
Sbjct: 365 IKSSVGFLIARLDDI 379
>gi|163846602|ref|YP_001634646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aurantiacus J-10-fl]
gi|222524398|ref|YP_002568869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp.
Y-400-fl]
gi|163667891|gb|ABY34257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aurantiacus J-10-fl]
gi|222448277|gb|ACM52543.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus sp.
Y-400-fl]
Length = 490
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 72/245 (29%), Gaps = 39/245 (15%)
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++I E ++ E+E + LS ++F L + +++
Sbjct: 219 DQIIDEVFRRYELE---LIVTERQPE-----------LSKDEFRQAL------LDQYRER 258
Query: 138 LAIQSIWPDVVKNDFMLKYG---NLEMEIPANKQKMKNITVR-EYLIRTVLFSIPDNKLQ 193
L + ++ + + G E E + +Q + +T E + +
Sbjct: 259 LL-----NEQIQARLVPEDGFTYKTEAERVSARQILVAVTPPAEATPEQIEAAFAAALPA 313
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252
Q V + A+ + L + + + + P+
Sbjct: 314 AQEIVAQLRNGADFATLAAERSDDIGSRENGGDIGSFDRNGFADNGATYPPELVAAAFSL 373
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
N ++P TQ G + I D+ + + ++ + R+ A
Sbjct: 374 PVNQVSDPIRTQFGWHILEITDQTIPS---------QEEQLSQARTEAFDRWIAEQRAAA 424
Query: 313 IIHYY 317
+ +
Sbjct: 425 DVRRF 429
>gi|160902886|ref|YP_001568467.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis
SJ95]
gi|160360530|gb|ABX32144.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Petrotoga mobilis
SJ95]
Length = 558
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 111/307 (36%), Gaps = 33/307 (10%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG---DISKRIA-----LLKLQKINGEL 72
+L++F I+ I+S ++ S T+ +GE I + ++ + + LL + N +
Sbjct: 4 LLVVFGILVILSVSIFSESVAYLTSQDGEQIHESYFLELDQLMGEYHNTLLNMLSQNPQY 63
Query: 73 EKIAVQEL----IVETL-KKQEIEKS----GITFDSNTVNYFFVQHARN---TGLSAEDF 120
++ + L I + L + + +EK GIT D+ ++ Q + + F
Sbjct: 64 DQYFNKPLDLISITDVLMEYKAMEKFLNDNGITLDATKISQETDQMYSQYMGNESTKQIF 123
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
F +K+ +F+ +++ +V+ E+E+ E+
Sbjct: 124 LMFFEKE----EYFRGFVSSLVYRNEVINELRNYFSNFSEVELSTYVSDNLENFKNEFDT 179
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+ + ++ + +++ K+ + G ++
Sbjct: 180 VKISRIVTVDESTANNLKSEILQNNISFTDAASKNSVDAQ------TASVGGLVGWVKRG 233
Query: 241 DLHPQ-FQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKI 297
D+ F+ L + P + G E + + DK+ + E+ + +Q T + +
Sbjct: 234 DISENIFEASLSSTPGEIIGPLSSPLGYEIVRVEDKKIYETADELLADEDIKSQLTASYV 293
Query: 298 EKHEAEY 304
+ +
Sbjct: 294 DYQINNW 300
>gi|110833403|ref|YP_692262.1| peptidyl-prolyl isomerase [Alcanivorax borkumensis SK2]
gi|110646514|emb|CAL15990.1| peptidylprolyl isomerase [Alcanivorax borkumensis SK2]
Length = 269
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 40/236 (16%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
T+ + IT +I++ + +N + + A + L+V L Q+ + G+ D
Sbjct: 18 ITVGDQTITQDEIAQEMQYHPATDLN-QAQHNAARALVVRQLLLQQAQTMGLAIDCEGDE 76
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ + + K + +
Sbjct: 77 AVISALLER------ELT-------------------------------VPKPQDEDCRR 99
Query: 164 PANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ + + L R +L + PD+ + K ++ R + ++F
Sbjct: 100 FHKVEIDRFSEPCQVLTRHILLAAGPDDARSRDSQYHQGQKLIQQLRDAPQRFPELAQRF 159
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRD 277
+ G+ +L P+ +L++ P T+ G + I ++R+
Sbjct: 160 SQCPSKDQGGELGWLQLGQTIPELDKVLQRLPEGLHARPLPTRYGWHVVHIIERRE 215
>gi|327312552|ref|YP_004327989.1| putative phage tail component, N-terminal domain-containing protein
[Prevotella denticola F0289]
gi|326944288|gb|AEA20173.1| putative phage tail component, N-terminal domain protein
[Prevotella denticola F0289]
Length = 474
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 84/258 (32%), Gaps = 45/258 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE--- 79
+ + + + ++ + TING+ ++ + +G +++ +V E
Sbjct: 5 ALLSVALLSATMAYGQTDPTIMTINGQPVSRSEFEYSYN---KNNTDGVIDRKSVDEYVP 61
Query: 80 -LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-SSFLDKQGIGDNHFKQY 137
+ LK Q + + + F FL + Q
Sbjct: 62 LFVNYKLKVQAALDAHLD-------------------TLPAFRKEFLGYRN-------QQ 95
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ I V+++ Y + + +I AN + +L + + + +
Sbjct: 96 IRPAFITDADVEDEARKIYRDTKQQIDANGGL--------WHCAHILIGMGQHTSKEEEA 147
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQ 254
+++ D+ + L+ D L K S + G L + +F+ +L
Sbjct: 148 AARQLADSIYTALQKGADFADLAKRYSTDTSSAKNGGDLPRLQKGQTVAEFEKAMLTLKP 207
Query: 255 NNTTNPYVTQKGVEYIAI 272
T+ P ++ G I +
Sbjct: 208 GETSRPVLSPFGFHIIRM 225
>gi|323526043|ref|YP_004228196.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
gi|323383045|gb|ADX55136.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
Length = 646
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 72/238 (30%), Gaps = 25/238 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + ++ V I ++ + S ++NG IT + D + R L
Sbjct: 5 FRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDNAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ +++ G E + LI + + E ++ +T + V +
Sbjct: 65 RARQMLGAQFDIKAFDTPERRSEMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + + + L QG+ + + + + +
Sbjct: 125 SSLKKPDGSIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQL-----PASIQGSAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAEQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQYL 237
>gi|152984414|ref|YP_001350152.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
aeruginosa PA7]
gi|150959572|gb|ABR81597.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa PA7]
Length = 314
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 77/257 (29%), Gaps = 37/257 (14%)
Query: 89 EIEKSG-ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK---QGIGDNHFKQYLAIQ--- 141
+ + G + + + + T + L++ + + + + Q
Sbjct: 47 AVARLGALQVAPDELKALLAEVPAQTRAQLGENRDALERWMRARLAEKALYEQASAQDWQ 106
Query: 142 ----------SIWPDVVKNDFMLKYGNLEMEIPA--------NKQKMKNITVREYLIRTV 183
+ +V ++ + + P+ K + Y + +
Sbjct: 107 QRPEVKTLIDAATRQIVLRTYLESVSTVPEDYPSDADLHDAYEANKAQLGVPALYRVSQI 166
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLL-ES 240
+ + R + E R D +L + S + G LL ++
Sbjct: 167 FIATATAGGP----AEARKRAQELYRQAATGDFAELARKYSDDPQTARNGGDIGGLLAQA 222
Query: 241 DLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTK 296
L P + L++ + + P G + + ++RD + + L A +
Sbjct: 223 QLLPAIRPALERLKVGEVSEPIQGGNGFHLVKLTERRDPRLASLDEVRER-LRASLRAQR 281
Query: 297 IEKHEAEYVKKLRSNAI 313
E+ Y+ L +NA
Sbjct: 282 QEQIAKAYLDGLVNNAT 298
>gi|325846640|ref|ZP_08169555.1| putative peptidylprolyl isomerase PrsA3 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481398|gb|EGC84439.1| putative peptidylprolyl isomerase PrsA3 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 248
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 42/234 (17%)
Query: 41 RIRTTINGEVITDGDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
I +NG+ I+ D+ ++ + ++Q L + ++ E L QE+ I
Sbjct: 7 EILAEVNGKKISQKDV---VSFITQMQGGQQFLNPQGIHQIADE-LVNQEL--MYIDAIE 60
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
N ++ + L+ E+ + FK + L
Sbjct: 61 NKLDQD-KEFTDQVKLTKENMLKNYAMHLL----FKD---------------IKVSDDEL 100
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ NK+ +K Y +L ++ K +++ ++ + K
Sbjct: 101 KEYYDNNKEVIKQPKT--YKASHILV-------DSEDEANKILEE-----IKAGLEFEKA 146
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAI 272
S G + + +F+ L K ++ + P +Q G I +
Sbjct: 147 ADKYSTDKASKGGDLGEFPQGAMVKEFEEALDKLNEGEISKPVKSQFGYHIIKL 200
>gi|238024473|ref|YP_002908705.1| hypothetical protein bglu_2g10690 [Burkholderia glumae BGR1]
gi|237879138|gb|ACR31470.1| Hypothetical protein bglu_2g10690 [Burkholderia glumae BGR1]
Length = 278
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 21/169 (12%)
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR-------IKD 204
FM + E EI A K K+ Y + +L + K+
Sbjct: 114 FMRQITPSEAEISAYYNKHKSDYNL-YSLSHILVKFEKDPSNLPAEQAKKIEAQAFNKAQ 172
Query: 205 AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD---LHPQFQN-LLKKSQNNTTNP 260
A E+RL+ D ++L S + I + E+ L P F+ +L Q + T P
Sbjct: 173 AIEARLKAGADFHELAAQLSDDANSRI-DGGRVPETMARFLAPAFKPEILAAKQGDITPP 231
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKA------YLSAQNTPTKIEKHEAE 303
+ G I + + ++A + +I ++
Sbjct: 232 LKSSFGYHIIMVEGV--VPSDMARNRADVINDIREGKLAEKQISLTSSK 278
>gi|229541454|ref|ZP_04430514.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus coagulans
36D1]
gi|229325874|gb|EEN91549.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus coagulans
36D1]
Length = 290
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 38/242 (15%)
Query: 76 AVQELIVETL--KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG-IGDN 132
+Q+L +E + KK ++KS I VN Q + F++ L + G +
Sbjct: 53 VLQQLTIEKVLSKKYTVKKSEI---DKQVNDTKKQLGSS-------FNTALQQYGYANEK 102
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
F+ + + + + K N + R +L S
Sbjct: 103 DFRNSVKVGLLEQKAAEATIHPTEK-------QLKNYYNNDIKPKIKARHILVSSKSKAE 155
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251
+ + K D + D K G + ++ F+N K
Sbjct: 156 DIKKQLDK-GADFATLAKKYSTDTATASK---------GGDLGWFGAGEMDSDFENAAYK 205
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKR------DLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
N + P T G I + ++ ++ ++ K Y ++ T KI+ + +
Sbjct: 206 LKVNEISGPVKTSYGYHIIQLTGEKQKKPYSEMKKDVV-KQYKESKVTTEKIQSVLKKEL 264
Query: 306 KK 307
K
Sbjct: 265 KA 266
>gi|255318960|ref|ZP_05360185.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens
SK82]
gi|262378304|ref|ZP_06071461.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens
SH164]
gi|255303977|gb|EET83169.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens
SK82]
gi|262299589|gb|EEY87501.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter radioresistens
SH164]
Length = 623
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 18/154 (11%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
S IK +LI+F V I Y S + T+NG+ I+ ++
Sbjct: 1 MESFRKVIKGWLGIVLLILFLTPLAFVGIEGYFSGGNKENVAATVNGQEISKKELESLTK 60
Query: 62 LLK---LQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
K L +NG+ +++ A+ LI + L Q+ EK GI+ + Q
Sbjct: 61 SYKEQYLNFVNGDETLLNQPFIQQTALDHLIAQNLILQQAEKLGISLSDAQIEQMLAQQP 120
Query: 109 -HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+N S + ++L G+ L
Sbjct: 121 SFQQNGQFSQTLYENYLRSVGLTSQGLIANLRQD 154
>gi|308185912|ref|YP_003930043.1| peptidyl-prolyl cis-trans isomerase D [Pantoea vagans C9-1]
gi|308056422|gb|ADO08594.1| peptidyl-prolyl cis-trans isomerase D [Pantoea vagans C9-1]
Length = 622
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 35/317 (11%), Positives = 88/317 (27%), Gaps = 82/317 (25%)
Query: 43 RTTINGEVITDGDISK-----RIA--------LLKLQKING---ELEKIAVQELIVETLK 86
+NG+ I+ G + + R +L +G ++ + A+ +LI + L
Sbjct: 42 AAKVNGQEISRGQLEQAFNSERSRQQQMLGDQFSQLASNDGFMQQMRQQALSQLIDQALL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
I++ ++ + V N + + + G + + + L Q
Sbjct: 102 DSYIKELHLSISDDQVKQAIFNQQAFQTNGKFDNAKYLALIGNMGFSADQYAEALRKQLS 161
Query: 144 WPDVVKN-------------------DFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
++ +++ A KQ + + + +Y +
Sbjct: 162 NQQLINAVANTDFTLKGEASKLVDLVSQQRDIRQATLDVNALMAKQTVTDDEISQYYQQH 221
Query: 183 -VLFSIPDN-----KLQNQGFVQKRIKDAEE--------------SRLRLP----KDCNK 218
F P+ L + +Q+ +A+ R R K
Sbjct: 222 KTSFMAPEQFRVSYILMDAASMQQDASEADIQAWYDQHKADYSQPQRNRYSVIQTKTEAD 281
Query: 219 LEKFASKIHDVS------------------IGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
+++ + G +L S + +N + +
Sbjct: 282 ANAVLAQLKGGANFADVAKAKSIDPISARKGGDMGWLEPSTTPDELKNAGLTEKGQMSGV 341
Query: 261 YVTQKGVEYIAICDKRD 277
+ G + + D +
Sbjct: 342 IKSSVGFLVVRLDDIQP 358
>gi|254249300|ref|ZP_04942620.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
gi|124875801|gb|EAY65791.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
Length = 410
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 82/306 (26%), Gaps = 48/306 (15%)
Query: 20 FVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
V+ + C + S + + + +N I D+ ++ L
Sbjct: 142 AVIALVCATGMTSVVAAEAGTATLPKGVVAVVNNMPIAQSDVDAIVSASGQADTPA-LRD 200
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
++LIV L +Q +K+ V + +A+ +
Sbjct: 201 AVKRDLIVRQLVEQAADKANYG-SRPEVQGIVSR--ARANAAADLY-------------L 244
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ L Q + VK + + N EY V + P
Sbjct: 245 RDALGAQRVTDAQVKAHY--------------DYIVANAAQFEYRAEVVAVADPAKANAA 290
Query: 195 QGFVQKRIK---DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+++ A++ + + + + + G P Q +
Sbjct: 291 AAELKQGAAFDTVAKKYNTTANGGVAEWSELKTPLAEGRTGGLPM-------PLAQAMTS 343
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ P ++ + DKR + K L Q + V KL
Sbjct: 344 LKPGAVSGPIRIGNAYAFVKLDDKRPVVVPSFDKAKGVLRQQLEQQARQSAMTALVDKLA 403
Query: 310 SNAIIH 315
+ A I
Sbjct: 404 AQATIQ 409
>gi|93006476|ref|YP_580913.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter
cryohalolentis K5]
gi|92394154|gb|ABE75429.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter
cryohalolentis K5]
Length = 624
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 88/313 (28%), Gaps = 86/313 (27%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDFSSFLDKQ 127
L + ++ LI TL +Q+ K G+T +T+N Q + S + F+SFL ++
Sbjct: 81 LHEQVLKGLIDRTLLEQQAGKLGMTVSDDTINRLLRQEEIFKGADGEFSNDQFASFLRQR 140
Query: 128 GIGDNHFKQYLAIQSI--------------------------------------WPDVVK 149
+ N Q W D V
Sbjct: 141 NMTKNQLFDEFRNQLSLDQLNASIVGTAAYPMKAVSQLINLQLEARNIWLHRFNWQDYVS 200
Query: 150 NDFMLKYGNLEMEIPANKQKMKNIT------------------------VREYLIRTVLF 185
L +++ ANK +K+ ++Y
Sbjct: 201 -KVKLSKNDIQAYYDANKDTLKSAAMVDLAYLQLSPQTIQVNEVTKEDLQQQYEAYKQSL 259
Query: 186 SIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLES 240
++ D + +Q + K D ++RL + K + + + G S
Sbjct: 260 AVVDERKISQILLTGSDAKARADKIKARLAKGEAFAKVAKAESDDPSGETGGDIGRFNPS 319
Query: 241 DLHPQFQNLLKKSQ----NNTTNPYVTQKGVEYIAIC--------DKRDLGGEIALKA-- 286
+ K + + + P T G + + + ++ KA
Sbjct: 320 VFGNDAAAVEKALEGLSVGDISVPVKTSFGYQIFTVTEDNGNKIPSLESMRDDLIAKAKE 379
Query: 287 YLSAQNTPTKIEK 299
Y + K+
Sbjct: 380 YKRQEIYADKVTA 392
>gi|124486132|ref|YP_001030748.1| hypothetical protein Mlab_1314 [Methanocorpusculum labreanum Z]
gi|124363673|gb|ABN07481.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanocorpusculum
labreanum Z]
Length = 93
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
+ + K+ + ++ D KL K S+ + G Y + + F++ K
Sbjct: 13 TEAQAKEIMQ-KISAGDDFAKLAKMYSQCPSGNAGGDLGYFGKGQMVKPFEDACFKAKAG 71
Query: 256 NTTNPYVTQKGVEYIAICDKRD 277
+ P TQ G I + D ++
Sbjct: 72 DVVGPVKTQFGWHIIKVTDIKN 93
>gi|319407575|emb|CBI81225.1| peptidyl-prolyl cis-trans isomerase [Bartonella sp. 1-1C]
Length = 308
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 87/293 (29%), Gaps = 54/293 (18%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ + S + I+G+ IT G + ++A++ I L + E
Sbjct: 32 AAEKPVPLSHVIAVIDGKNITAGQLD----------------ELALE--INPNLIRVSDE 73
Query: 92 KSGITFDSNTVN-YFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
K +T ++ + A GL E + + + + Q + ++V
Sbjct: 74 KRRVTVLKAYLDMQALAKAALQKGLDKTEAYDKRMA-------IMRDNILQQLYFKEMV- 125
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ K + +++ +K+ E R +L + V KR+ E
Sbjct: 126 ---VDKIADADVKALYDKEIAALPKEDEIKARHILVKTKE----EAEKVIKRLHKGENFE 178
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGV 267
KD G Y + F+ T P + G
Sbjct: 179 EIAKKDSTDG-------SSAVGGDLGYFSRGQMVKPFEEAAFNLKVGEYTKKPVESPFGW 231
Query: 268 EYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I I D+R + ++ K L Q + + LR + Y
Sbjct: 232 HVIKIEDRRLKQPPVFDDV--KDVLRTQLIREHYQTL----ITDLRGKINVEY 278
>gi|332290245|ref|YP_004421097.1| peptidyl-prolyl cis-trans isomerase [Gallibacterium anatis UMN179]
gi|330433141|gb|AEC18200.1| peptidyl-prolyl cis-trans isomerase [Gallibacterium anatis UMN179]
Length = 621
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 69/277 (24%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFVQHARNTG 114
L + LI + L +Q ++ G+ + N + Q N
Sbjct: 87 LRHSVLDRLIDDELLRQYSKELGLGVGDEAIKQAIVMNPAFQKDGQFDNAVYQQLLANNN 146
Query: 115 LSAEDFSSFLDKQGI--------------GDNHFKQYLAIQSIWPDVVKNDF-----MLK 155
L+ + ++ + + + + +Q++ + V F K
Sbjct: 147 LTPDQYAEIVRQDLVLSQLMGSLLASDFLTEAQQQQFVKLFFQKRSVRLATFPVADLAAK 206
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ---------------- 199
+ EI K L++ + +KL V
Sbjct: 207 QTISDQEIEKYYNDHKAAFATPELVKVQYIDVNKDKLAKDLQVSDVEVAQYYQDNKSQFM 266
Query: 200 --------------KRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLH 243
+ D ++L+ D +L K S ++ V+ G +++ L
Sbjct: 267 GQAKQHIAHIQVNTQAEADDIYNKLQQGADFAELAKKYSIDRLTAVNGGDLSWVVAGQLP 326
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
F+ + + P I + + +
Sbjct: 327 KAFEAAADNTAVGAYSKPTKVDDKYHIIKVLARNEAT 363
>gi|307826208|ref|ZP_07656418.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter
tundripaludum SV96]
gi|307732742|gb|EFO03609.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter
tundripaludum SV96]
Length = 343
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 81/280 (28%), Gaps = 53/280 (18%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+NG+ I + + + ++ V+ELI L Q+ + +
Sbjct: 45 VAVVNGQYIAKSTLETLEKEIAERSHGQTFPKEKLVEELIQRELLVQDATQKQLDKSPEL 104
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V + A+ L+ D +F+ + D K +
Sbjct: 105 VAQL--EAAKKALLTQADLQNFIKANPVTDAEIKA---------------------EYDS 141
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
++ A K EY R +L +A++ L K + +
Sbjct: 142 KVAAEKG-------TEYKARHILVKTET--------------EAKKLITELDKGADFAKL 180
Query: 222 FASKIHDV----SIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDK 275
D + G + + + F + + T P TQ G I D
Sbjct: 181 ANKNSLDAKESQNGGDLGWFSAAQMVAPFSEAVAALEKGKYTKEPVKTQFGFHVILKEDS 240
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
R + + Q TP K E ++ LR A +
Sbjct: 241 RPVT--PPPLEAVKEQLTPFLQRKKVQEMIETLRKQAKVE 278
>gi|254284340|ref|ZP_04959308.1| putative peptidyl-prolyl cis-trans isomerase D [gamma
proteobacterium NOR51-B]
gi|219680543|gb|EED36892.1| putative peptidyl-prolyl cis-trans isomerase D [gamma
proteobacterium NOR51-B]
Length = 620
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 52/388 (13%), Positives = 111/388 (28%), Gaps = 96/388 (24%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN------ 69
+ +++ F + S + + +NGE I+ ++ IA K Q
Sbjct: 12 IVIGLIVLSFAAFGLESLLPGGSGTSV-AEVNGEEISPAELQNAIASQKRQLTQIFGDRI 70
Query: 70 -------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAED 119
+ A++ LI L Q G+ + + R+ S +
Sbjct: 71 DPAMLDDERIRPSALEGLIERKLLLQHAVDLGMIASAQAIGEEITAIEAFQRDGVFSPDQ 130
Query: 120 FSSFLDKQGIGDNHFK-----QYLAIQS--------------------IWPDVVKNDFML 154
+ S L G+ F+ + Q +W + ++
Sbjct: 131 YKSVLANAGLTPERFRRMQSQDLMLSQLQGAISQSAFVSPSEMEAAAKVWAEERDVRYLE 190
Query: 155 K--------YGNLEMEIPANKQKMKNITVRE--YLIRTVLFSI-----PDNKLQNQGFVQ 199
E EI ++ V E + +L ++ P ++ + +
Sbjct: 191 APLSDFDRPDSVDEAEIAEYYDNNQDRFVTEPAANVGYILLAVEDFYEPVDEALVREQFE 250
Query: 200 KRIKD---AEESR------------------------LRLPKDCNKLEKFASKIHD---- 228
+ A++SR R + A ++ D
Sbjct: 251 AVRDEYEVADQSRVSHILIIESDEDSDTSYADRVGEVARRLDAGEDFGQLAMELSDDVGS 310
Query: 229 -VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
S G+ + + + + S + P T G +I + ++ + GE A
Sbjct: 311 AGSGGELGFTDGTAFPEPMEEAIASLSVGAYSGPVETDAGTHFIRVEER--VAGERPDFA 368
Query: 287 YLSAQNTPT-KIEKHEAEYV---KKLRS 310
L + KI E + + +L+
Sbjct: 369 TLREELEQAIKISNAERDLLLAVDELKD 396
>gi|161504371|ref|YP_001571483.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160865718|gb|ABX22341.1| hypothetical protein SARI_02482 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 623
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 72/289 (24%), Gaps = 74/289 (25%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
L + + LI E L Q + + V +
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGRFDNNRYNAIVNQM 145
Query: 114 GLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G++A+ ++ L Q G+ F + V + + + + A
Sbjct: 146 GMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVSQQRVVREATIDVNALAA 205
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES----------------- 208
+Q Y F P+ + + A S
Sbjct: 206 KQQATDQEVSSYYDQNKTRFMTPEQFRVSYIKLDAATMQAPVSDADIQAYYDQHLDQFTQ 265
Query: 209 --RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLHP 244
R R K E A + D + G +L ES P
Sbjct: 266 PERHRYSIIQTKTEDDAKAVLDALNKGEDFATLAKEKSTDIISARNGGDMGWLEESATVP 325
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALK 285
+ +N K + + + G + D + ++ +IA K
Sbjct: 326 ELKNAGLKEKGQISGVIKSSVGFLVARLDDVQPAKVKPLSEVRDDIAAK 374
>gi|311064599|ref|YP_003971324.1| trigger factor, ppiase [Bifidobacterium bifidum PRL2010]
gi|310866918|gb|ADP36287.1| Tig Trigger factor, ppiase [Bifidobacterium bifidum PRL2010]
Length = 461
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ + EK V+EL + + EK + V F A+ G+ F + K
Sbjct: 326 EQKADAEKQVVKELTDQMVLDALAEKLDVKVSQADVTNFLASIAQQYGMDPSAFIQAIVK 385
Query: 127 QG 128
G
Sbjct: 386 NG 387
>gi|217076606|ref|YP_002334322.1| basic membrane protein, putative [Thermosipho africanus TCF52B]
gi|217036459|gb|ACJ74981.1| basic membrane protein, putative [Thermosipho africanus TCF52B]
Length = 333
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 31/127 (24%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------------------ 74
+ ++ +NGE IT +++ + KL ++++
Sbjct: 17 FSEELPATSTVAVVNGEAITLEQLNRAADVQKLMIGISQVDQTFFSVLSNTEEGVKVILR 76
Query: 75 ---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + +L+ + L Q +K G V + S +LD+QGI +
Sbjct: 77 YKRVVLDDLVNKLLIVQFAQKYGARLSEEEVRNVVDK----------QISDYLDQQGIDE 126
Query: 132 NHFKQYL 138
F YL
Sbjct: 127 KTFDMYL 133
>gi|288959403|ref|YP_003449744.1| parvulin-like peptidyl-prolyl isomerase [Azospirillum sp. B510]
gi|288911711|dbj|BAI73200.1| parvulin-like peptidyl-prolyl isomerase [Azospirillum sp. B510]
Length = 374
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 79/289 (27%), Gaps = 59/289 (20%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELE---KIAVQELIVETLKKQEIEKSGIT 96
+ +NGE + D+++ ++ L Q +E + +L+ L K+G+
Sbjct: 106 DPVVARVNGEELHKSDVTRMVSQLPPQVQQMPIEMIYPAVIDQLVSGKLVSSAGYKAGLA 165
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V + G+ ++ + +
Sbjct: 166 DSP-EVKDEIKRAEER---------------GVQ--------------RAFIQKEIKARV 195
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
++ +N E +L + ++K D
Sbjct: 196 TPEALQKAYQDYLKENPAQEEVKAAHILVEKEEEAKAIIAQLKK------------GGDF 243
Query: 217 NKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAI 272
KL K SK + G Y + + + P + P TQ G I +
Sbjct: 244 AKLAKEKSKDAAAAAQGGDLGYFTKDAMVEPFANAAFSMKPGEVSKEPVKTQFGYHIIKV 303
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAE----YVKKLRSNAIIHYY 317
D+R + P + + V++LR A + +
Sbjct: 304 EDRR------TQPQPTLDEVKPQLEQTLSKDIVTALVEELRGKAKVETF 346
>gi|264677817|ref|YP_003277723.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
gi|262208329|gb|ACY32427.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni CNB-2]
Length = 632
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 65/237 (27%), Gaps = 26/237 (10%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ L ++ I + A + + +F + N
Sbjct: 180 QQAMDALY---------QRREIQVARFDASA----FAGKVQPTEAELKAFYEAH---TNQ 223
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNK 191
FKQ A + + E ++ + + E +L I K
Sbjct: 224 FKQPEAATVEYVQLDLAAVQQGIVLSEDDLRTYYKENAARLAGPEERRASHIL--INAAK 281
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYL-LESDLHPQ 245
+K AE+ ++ KD + A + G Y E+ + P
Sbjct: 282 DLPAAEREKAKAKAEQLLAQVRKDPKSFAQVAKANSQDPGSAANGGDLGYFGREAMVKPF 341
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ + K Q + ++ + G I + + + + + +
Sbjct: 342 EEAVFKMKQGDISDVVESDFGFHIIELTGIKQPKVPSFEEMRPKLEADLKQQQAQRK 398
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 88/300 (29%), Gaps = 30/300 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-- 70
++ + ++I I V+ + SS+ ++G IT D D + R +L+ N
Sbjct: 13 MILLFLLIIPSFIFVGVNQNYFTESSQTVARVDGHDITQQDWDNAHRAESDRLRAQNPTM 72
Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-------NTGL 115
E +++L+ + + K +T + + + L
Sbjct: 73 DAKLLDSPEARYATLEKLVRDRVLAAAAAKMHLTTPDAQLVRTLREIPAIASLQKPDGSL 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
AE + + + QG+ F+ L + V + + A Q+ +
Sbjct: 133 DAEAYKALVGSQGMTPEGFEANLRRELALNQV-----LGSVSSTSFTTAAQLQQAMDALY 187
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ I+ F + Q + E + + ++ +
Sbjct: 188 QRREIQVARFDASAFAGKVQPTEAELKAFYEAHTNQFKQPEAATVEYVQLDLAAV--QQG 245
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+L D + K++ P ++ + K E + Q
Sbjct: 246 IVLSED---DLRTYYKENAARLAGPEE-RRASHILINAAKDLPAAEREKAKAKAEQLLAQ 301
>gi|224283332|ref|ZP_03646654.1| trigger factor [Bifidobacterium bifidum NCIMB 41171]
gi|310287701|ref|YP_003938959.1| Trigger factor [Bifidobacterium bifidum S17]
gi|313140483|ref|ZP_07802676.1| trigger factor [Bifidobacterium bifidum NCIMB 41171]
gi|309251637|gb|ADO53385.1| Trigger factor [Bifidobacterium bifidum S17]
gi|313132993|gb|EFR50610.1| trigger factor [Bifidobacterium bifidum NCIMB 41171]
Length = 461
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ + EK V+EL + + EK + V F A+ G+ F + K
Sbjct: 326 EQKADAEKQVVKELTDQMVLDALAEKLDVKVSQADVTNFLASIAQQYGMDPSAFIQAIVK 385
Query: 127 QG 128
G
Sbjct: 386 NG 387
>gi|6006449|emb|CAB56780.1| p13 protein [Dictyostelium discoideum]
Length = 91
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 4/87 (4%)
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G + ++ F + K + P TQ G I + D R + E +
Sbjct: 7 GGDLGWAPATNYVQPFAEAVTKLKKGQLVDKPVQTQFGWHVIQVDDTRPV--EFPAMDQV 64
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAIIH 315
Q ++ A Y K+LR A I
Sbjct: 65 RPQLEEMLRQQTLANYQKQLREQAKIQ 91
>gi|319408175|emb|CBI81828.1| peptidyl-prolyl cis-trans isomerase [Bartonella schoenbuchensis R1]
Length = 316
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 92/293 (31%), Gaps = 54/293 (18%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ S + ING+ IT GEL+++A++ I L + E
Sbjct: 41 ASAKPIAPSHVMAIINGKSIT----------------AGELDELALE--INPNLARLSDE 82
Query: 92 KSGITFDSNTVN-YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ IT ++ F + A G+ + + + Q + +V
Sbjct: 83 QRRITVLKAYLDMQAFAKAAIEKGIDKTEVYD------KRMAIMRDNVLQQLYFKQMV-- 134
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ K + +++ +K+ E R +L + +A RL
Sbjct: 135 --VDKIQDADLQALYDKEVAALPKEDEVKARHILVKTKE------------AAEAIIKRL 180
Query: 211 RLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGV 267
+ + ++ K S S+G Y + F++ T P + G
Sbjct: 181 KKGESFEEIAKKDSTDGSASVGGDLGYFSYGQMVKPFEDAAFSLKVGEYTKKPVESPFGW 240
Query: 268 EYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + D+R ++ K L Q + + LR+ + Y
Sbjct: 241 HIIKVEDRRPKQPPAFDDV--KEVLRTQIMKDRYHAL----IIDLRNKVDVKY 287
>gi|126724635|ref|ZP_01740478.1| PPIC-type PPIASE domain protein [Rhodobacterales bacterium
HTCC2150]
gi|126705799|gb|EBA04889.1| PPIC-type PPIASE domain protein [Rhodobacterales bacterium
HTCC2150]
Length = 341
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 87/308 (28%), Gaps = 50/308 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++ ++ I +V + + T+NG+ IT L + + L
Sbjct: 61 MRFSHSFSAAAIMGMVFVGQPAFSQNMDTVLATVNGDQIT---------LGHMIAMEQRL 111
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ + L +++ + + LS E+ L K G+
Sbjct: 112 PQQYRN-YPDDVLYDGILQQLIQQALLSQIVDGKDDLV--LNLSIENEVRAL-KAGL--- 164
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
++ ++ + V + ++ E+ +L
Sbjct: 165 -LLDQISADAVTEEAVTKIYDERFAGQ-------------TGGVEWNASHILV------D 204
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQ-NLL 250
+ AE D +L K S G+ + + P+F+
Sbjct: 205 TEDEAKALIVTLAE------GADFAELAKEKSTGPSGPRGGQLGWFGPGQMVPEFEGAAA 258
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK------AYLSAQNTPTKIEKHEAEY 304
+ + + P TQ G + + D R+ + A + + IE E
Sbjct: 259 EMETGDVSAPVQTQFGWHVLKMNDIRETPAPTLEEVRAEIVAEIQGLAVDSAIEAAEVRA 318
Query: 305 VKKLRSNA 312
+L A
Sbjct: 319 TVELSDVA 326
>gi|90416122|ref|ZP_01224055.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium
HTCC2207]
gi|90332496|gb|EAS47693.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium
HTCC2207]
Length = 618
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 63/203 (31%), Gaps = 17/203 (8%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE- 71
I + I+F I S + +NGE +T+ + + I+ K + +N
Sbjct: 12 IAFGIVILIAIVFAFSGIGSLSMSGSGADTAVIVNGEKVTELSVLRAISSEKRRILNENE 71
Query: 72 -----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF----VQHARNTGLS 116
+ V++LI L Q + G+ S T + + +
Sbjct: 72 GLDASLLEDELIRPQVVEQLIGRRLLSQAAKSGGMGISSRTTSKLLLGTPAFLSEDGRFD 131
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+ + + QG F + L + V+ F+ E+ +
Sbjct: 132 QDLYLYTIRAQGYTSGTFLEMLRDDLLIEQYVRG-FVASGFVTASELDLIASITEQQRSY 190
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQ 199
YL + ++ L ++
Sbjct: 191 YYLTLPLQPAVDAVDLSDEQIAT 213
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 46/152 (30%), Gaps = 13/152 (8%)
Query: 152 FMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA-EES 208
F E +I A +Q+ + +L + P + + + + +A E
Sbjct: 240 FSATQSVAEEQILARYEEQRDSLESTTSRQAAHILLAQPSDDVLAEINEKLAAGEAFEAL 299
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
+D + G Y F+ L+ Q + P T G+
Sbjct: 300 AKEYSEDVGSAD---------FGGDLGYTSGDTFPESFETALEALQVGEVSPPVSTDSGI 350
Query: 268 EYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
I + D ++ + + Q T++
Sbjct: 351 HLIKLLDIQEKIVDFDSERARIEQELVTELTD 382
>gi|299144111|ref|ZP_07037191.1| PPIC-type PPIASE domain protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518596|gb|EFI42335.1| PPIC-type PPIASE domain protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 253
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 76/286 (26%), Gaps = 63/286 (22%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELI-VETLKKQEIEK 92
M ++ ++G IT D + + L Q +G+ +K + ELI E L IE
Sbjct: 1 MEKKVLAIVDGNEITMDDFNFFMESLNPQVRAYFTDGDKKKEIIDELIYQELLYLDAIEN 60
Query: 93 SGITFDSNTVNYFFVQHARNTG---LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
D + FV + T L L+ +
Sbjct: 61 ---KLDE---DEEFVTVSERTKASLLKTYALGKLLE--NVSP------------------ 94
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
E+E N +L +++ + K +
Sbjct: 95 -------SEKEIEEFYNANAEHYDVPNSVDASHILV---EDENKANELYNKILAGENFEE 144
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVE 268
L + + G + +F + + + + P T G
Sbjct: 145 LAKNNSMCPSKN--------NGGNLGVFHSGQMVREFDEKVFSMKEGEISEPVKTNFGFH 196
Query: 269 YIAICDK--------RDLGGEIAL--KAYLSAQNTPTKIEKHEAEY 304
I + ++ ++ K Y + KI + ++
Sbjct: 197 IIKLNKIIPSKKHTLSEVRDDVIKEVKRYKEQKIYMNKIRELSQKH 242
>gi|227554800|ref|ZP_03984847.1| peptidylprolyl isomerase [Enterococcus faecalis HH22]
gi|227176099|gb|EEI57071.1| peptidylprolyl isomerase [Enterococcus faecalis HH22]
gi|315166858|gb|EFU10875.1| putative foldase protein PrsA [Enterococcus faecalis TX1341]
gi|315575314|gb|EFU87505.1| putative foldase protein PrsA [Enterococcus faecalis TX0309B]
gi|315581481|gb|EFU93672.1| putative foldase protein PrsA [Enterococcus faecalis TX0309A]
Length = 362
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ K + +L + + S + + S+ T+ G IT D +I
Sbjct: 15 TGVHKRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------E 67
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ A +++ K E EK G + F + FS L + G+
Sbjct: 68 QSTSQQAFSQMV--IYKVFE-EKYGDKVTDKDIQKNFDEAKEQVEAQGGKFSDALKQAGL 124
Query: 130 GDNHFKQYLA 139
+ FK+ L
Sbjct: 125 TEKTFKKQLK 134
>gi|39997172|ref|NP_953123.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Geobacter sulfurreducens PCA]
gi|39984062|gb|AAR35450.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA]
gi|298506185|gb|ADI84908.1| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter
sulfurreducens KN400]
Length = 321
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/319 (11%), Positives = 93/319 (29%), Gaps = 27/319 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70
++T +L P +NG VI ++ + ++
Sbjct: 8 IITILCLLGSVPSAPGAETAVAPSGRAAAAVVNGAVIFRDELDHFVEFALSRRRGAGRKV 67
Query: 71 --ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
E +K ++ + + + + + ++G + ++ AR E S + + G
Sbjct: 68 TDEQKKRVERQELDKLIAMELLAQAGEKLNPADLSKKIQ--ARR-----EAIGSSVSRGG 120
Query: 129 I----GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA----NKQKMKNITVREYLI 180
++ + + + + E ++ A NK K +
Sbjct: 121 SVVAPSEDRLNDTARRDVLVDAYLASRGIDAIKVPETDLRAYYEKNKSGFKKPET--IAV 178
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239
R +L + ++ + R+ D L +S G +
Sbjct: 179 RHILVKVEKEASPETQAEARKKIEGIRDRIGAGADFAVLASESSDCASAAKGGDLGEIQR 238
Query: 240 SDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK-AYLSAQNTPTKI 297
+ +F + T+ T G I + ++ + Q
Sbjct: 239 GFMPREFDQVAFSLKPGETSGIVKTHHGFHIIRVMERHPETVRTFEEMRDFIEQYLAKDY 298
Query: 298 EKHE-AEYVKKLRSNAIIH 315
++ + E V++L+ A I
Sbjct: 299 QRKKVEEIVEELKRAATID 317
>gi|299531702|ref|ZP_07045107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
gi|298720418|gb|EFI61370.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni S44]
Length = 632
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 68/235 (28%), Gaps = 22/235 (9%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ L ++ I + A + + +F + N
Sbjct: 180 QQAMDALY---------QRREIQVARFDASA----FAGKVQPTEAELKAFYEAH---TNQ 223
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNK 191
FKQ A + + E ++ + + E +L + +
Sbjct: 224 FKQPEAATVEYVQLDLAAVQQGIVLSEDDLRTYYKENAARLAGPEERRASHILINAARDL 283
Query: 192 LQNQGFVQKRIKDAEESRLRL-PKDCNKLEKFASKIHD--VSIGKAQYL-LESDLHPQFQ 247
+ K + +++R PK ++ K S+ + G Y E+ + P +
Sbjct: 284 PAAEREKAKAKAEQLLAQVRKDPKSFAQVAKANSQDPGSAANGGDLGYFGREAMVKPFEE 343
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ K Q + ++ + G I + + + + + +
Sbjct: 344 AVFKMKQGDISDVVESDFGFHIIELTGIKQPKVPSFEEMRPKLEADLKQQQAQRK 398
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 44/318 (13%), Positives = 101/318 (31%), Gaps = 31/318 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-- 70
++ + ++I I V+ + SS+ ++G IT D D + R +L+ N
Sbjct: 13 MILLFLLIIPSFIFVGVNQNYFTESSQTVARVDGHDITQQDWDNAHRAESDRLRAQNPTM 72
Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-------NTGL 115
E +++L+ + + K +T + + + L
Sbjct: 73 DAKLLDSPEARYATLEKLVRDRVLAAAAAKMHLTTPDAQLVRTLREIPAIASLQKPDGSL 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
AE + + + QG+ F+ L + V + + A Q+ +
Sbjct: 133 DAEAYKALVGSQGMTPEGFEANLRRELALNQV-----LGSVSSTSFTTAAQLQQAMDALY 187
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ I+ F + Q + E + + ++ +
Sbjct: 188 QRREIQVARFDASAFAGKVQPTEAELKAFYEAHTNQFKQPEAATVEYVQLDLAAV--QQG 245
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+L D + K++ P ++ + I RDL KA A+
Sbjct: 246 IVLSED---DLRTYYKENAARLAGPEE-RRASHIL-INAARDLPAAEREKAKAKAEQLLA 300
Query: 296 KIEKHEAEYVKKLRSNAI 313
++ K + + ++N+
Sbjct: 301 QVRKDPKSFAQVAKANSQ 318
>gi|167040994|ref|YP_001663979.1| hypothetical protein Teth514_2383 [Thermoanaerobacter sp. X514]
gi|300913795|ref|ZP_07131112.1| conserved hypothetical protein [Thermoanaerobacter sp. X561]
gi|307725518|ref|YP_003905269.1| hypothetical protein Thet_2431 [Thermoanaerobacter sp. X513]
gi|166855234|gb|ABY93643.1| hypothetical protein Teth514_2383 [Thermoanaerobacter sp. X514]
gi|300890480|gb|EFK85625.1| conserved hypothetical protein [Thermoanaerobacter sp. X561]
gi|307582579|gb|ADN55978.1| hypothetical protein Thet_2431 [Thermoanaerobacter sp. X513]
Length = 238
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG I + R L + + ++ +Q+LI E +++ K I N
Sbjct: 66 IIAEVNGVPIYKNEFELRKGLALASGVQADNIDDYILQKLIREKVQEYLASKYNIKVSQN 125
Query: 101 TVNYFFVQHARNTGLSAED---FSSFLDKQGIGDNHF 134
+N + + + E + + G+ ++ +
Sbjct: 126 EINAYIEKEKKEFNEYPEAKKKLNELIAASGMTEDEY 162
>gi|222056568|ref|YP_002538930.1| hypothetical protein Geob_3486 [Geobacter sp. FRC-32]
gi|221565857|gb|ACM21829.1| conserved hypothetical protein [Geobacter sp. FRC-32]
Length = 526
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 64/180 (35%), Gaps = 18/180 (10%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVIT------DGD----ISK 58
S IK++ VL + +V + +NG I+ + D + +
Sbjct: 11 SVLIKIVFCIIVLSFVGTIFLVWGRGDETTGGDFAAKVNGTKISMDDYLKNYDRMKSLYQ 70
Query: 59 RI---ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARN 112
+I A+ + + K+A+ LI L +E ++ GI + + + + ++
Sbjct: 71 QIYGQAMTPDLEKQLGIRKMAINSLIDNALIVKEAKRMGIAVNKDEIANEIAKVPAFQKD 130
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ + ++ L + +F++ + + + + + ++ K +
Sbjct: 131 GVFNFDQYTQMLKAYRMTPANFEEGQEQEMLVKKA-REKVKERATVSDQDLQQAFNKQND 189
Score = 35.8 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 59/181 (32%), Gaps = 13/181 (7%)
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQK------MKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+V+K F+LK G L I K K L + +
Sbjct: 341 GEVIKRAFLLKQGELGGPIETAKGIYIIKVMEKKPAAVPPLAEIKGQLTQKVTEEKAREL 400
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
K+ + ++L K ++ + + + + DL NL + T
Sbjct: 401 AKKKAEEALAQLAKGTGTVKTQETGAFAYAANGVIPRIGTSPDLMEAAFNLTAAAP---T 457
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIA----LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ G + A+ K+ + A K + P K ++ ++K+L++ A I
Sbjct: 458 PKNTFKAGDRWYAVKLKQRIELNRADFQKNKEQIRQTLLPKKQQEALDNWMKELKAKAKI 517
Query: 315 H 315
Sbjct: 518 Q 518
>gi|83950728|ref|ZP_00959461.1| PPIC-type PPIASE domain protein [Roseovarius nubinhibens ISM]
gi|83838627|gb|EAP77923.1| PPIC-type PPIASE domain protein [Roseovarius nubinhibens ISM]
Length = 286
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 87/279 (31%), Gaps = 46/279 (16%)
Query: 39 SSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + T++G IT G I R L +L + + I++ L +Q I ++
Sbjct: 32 ADTVVATVDGNEITLGHMIVLRAG---LPAQLSQLPPAVLYKGILDQLIQQAIMENNFE- 87
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ ++ LS E+ L I + + +
Sbjct: 88 ---------GELSKAAKLSLENERRAL------------------IAGETINRVANVALT 120
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ ++ M E+ +L + + +++ A+ S L
Sbjct: 121 DEALQKVYEDTYMTAEAQTEFNAAHILVETEEEA---KALIEELNGGADFSAL------- 170
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
++ ++ + G+ + + F + K + + P TQ G I + D R
Sbjct: 171 -AKEKSTGPSGPNGGELDWFAGDMMVEPFAEAVAKMEKGAISEPVQTQFGWHVIKLNDTR 229
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
E + A+ ++ Y+ L A +
Sbjct: 230 --TKERPELEEVRAELEEVVRQQAIDAYMTDLSEGAKVD 266
>gi|298490621|ref|YP_003720798.1| PpiC-type peptidyl-prolyl cis-trans isomerase ['Nostoc azollae'
0708]
gi|298232539|gb|ADI63675.1| PpiC-type peptidyl-prolyl cis-trans isomerase ['Nostoc azollae'
0708]
Length = 252
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 81/270 (30%), Gaps = 44/270 (16%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK----QEIE-KSGITFDS 99
TIN E I D+ + I L++ + + I + L++ QE+E ++ I +
Sbjct: 8 TINDEQI---DLYQVIQYLQVSGK--------LNQFISDVLRQYVLEQELETRNDIEIST 56
Query: 100 NTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ + + L+ E F +L G F + F K
Sbjct: 57 ALIEQAIIDYRLKNQLTDPEQFQKWLKNNGSDYATFHASVT------------FSFKLEK 104
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
L+ I K I + YL R VL I + + + +I++ +
Sbjct: 105 LKALIVEPKLPEYFIERKIYLDRVVLSRIMVDNRELAEELHTQIEEGGSFEQLAKEYSLA 164
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEYIAICDKRD 277
E+ + + + L + + + P + + + +
Sbjct: 165 DERIFNGM-------MGPISRGSLPDILRAAVDAATPGKLIGPIELEGSLSLFRLENILP 217
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
E E +++ +
Sbjct: 218 ASLENT---QFKQSLQNELFE----KWLGE 240
>gi|145628054|ref|ZP_01783855.1| lipoprotein signal peptidase [Haemophilus influenzae 22.1-21]
gi|144979829|gb|EDJ89488.1| lipoprotein signal peptidase [Haemophilus influenzae 22.1-21]
Length = 622
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 43/407 (10%), Positives = 119/407 (29%), Gaps = 117/407 (28%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI---- 56
+ K+ + I + + F + + Y ++ + +NGEVI+ D
Sbjct: 2 LIEKMHNLTNSKISKFILGLIAVSFLVGGMSGY-LFSSNDTYAAKVNGEVISQQDFLNRY 60
Query: 57 -------SKRIALLKLQKINGE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-- 102
++R + + + L + V +I + L +Q +++ + +
Sbjct: 61 NQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKR 120
Query: 103 ---------------NYFFVQHARNTGLS----------------------------AED 119
N + + + L+
Sbjct: 121 AIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQ 180
Query: 120 --------------------FSSFLDKQGIGDNHFK-------------QYLAIQSIWPD 146
+ + KQ + D+ K + + +Q I D
Sbjct: 181 VKNSAEIFFQKRLARLATLSLADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYI--D 238
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ ++ ++EI Q K + ++L + F+ + +QK A+
Sbjct: 239 LSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLA-HIQFANEQDAKVAYEELQKGANFAD 297
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQK 265
++ + KI + G ++ E++L F++ Q + P
Sbjct: 298 VAKAKS----------LDKISGENGGNLGWVNENELPKAFEDAAAALQVGQYSQPINVDG 347
Query: 266 GVEYIAICDKRDLG--------GEIALKAYLSAQNTPTKIEKHEAEY 304
+ + +++ ++ K+ + ++ + + + +
Sbjct: 348 NYHIVLVQERKAQSLENVKAQIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|114704310|ref|ZP_01437218.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fulvimarina pelagi
HTCC2506]
gi|114539095|gb|EAU42215.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Fulvimarina pelagi
HTCC2506]
Length = 295
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 90/284 (31%), Gaps = 48/284 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLK--LQKINGELEKIA-VQELIVETLKKQEIEKSG 94
S + T+ E IT+ D++ A + +++ + +IA + LI + Q E++
Sbjct: 26 AQSPVVATVGEEEITEADLTAAQAEIGGDFERVPEDQRRIAVLAALIDIKVLAQAAEEAT 85
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ D + R+ L +++ ++G+ + ++ +
Sbjct: 86 LQ-DDAQIAATI-DFLRDRTLH----NAYFAREGVDTVT-----------DEELRARYEQ 128
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ +E +E R +L D +Q A+ + L K
Sbjct: 129 EIAAMEP-------------PQEVRARHILLETEDQARTVIEELQ---NGADFAELATEK 172
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAI 272
+ + G + + + P F T P TQ G I +
Sbjct: 173 STGPTAQ--------NGGDLGFFADGQMVPPFSEAAFALEPGAITEEPVQTQFGWHVIKV 224
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+KR E + Q +++ V + R + Y
Sbjct: 225 EEKRQ--AEPPAYEQVQEQIRRAVLQEKYVGLVGEAREELGVTY 266
>gi|167849967|ref|ZP_02475475.1| putative rotamase [Burkholderia pseudomallei B7210]
Length = 156
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 3 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 46
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 47 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 106
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 107 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 149
>gi|157691720|ref|YP_001486182.1| peptidylprolyl isomerase PrsA [Bacillus pumilus SAFR-032]
gi|157680478|gb|ABV61622.1| peptidylprolyl isomerase PrsA [Bacillus pumilus SAFR-032]
Length = 292
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 28/221 (12%)
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L +Q++ ++ ++ + L + D+ G K Y+ Q +
Sbjct: 57 LVQQKVLADKYKVSDKEIDKKMEEYKKT--LGEDRLKQLQDEFG------KDYIKDQVKY 108
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ + + E+ A +K IR + D K ++ + +
Sbjct: 109 ELLTQKAAKANIKITDKEVKAYYDDLKG------KIRASHILVADKKTADEVEKKLDKGE 162
Query: 205 A-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQF-QNLLKKSQNNTTNPY 261
+ D + G + E + F + K N + P
Sbjct: 163 KWDAVVSEYSTDTASAAQ---------GGDVGWFAKEGQMDENFSKAAFKLKVNEISKPV 213
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+Q G I ++R + +KA L + K
Sbjct: 214 KSQFGYHIIKKTEERGKYDD--MKADLKKELLDQKQADTNE 252
>gi|307942651|ref|ZP_07657999.1| cell-binding factor 2 [Roseibium sp. TrichSKD4]
gi|307774290|gb|EFO33503.1| cell-binding factor 2 [Roseibium sp. TrichSKD4]
Length = 286
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 81/264 (30%), Gaps = 48/264 (18%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQK-INGELEKI 75
++ F ++ S S A + + IT+ DI+ L +LQ+ + I
Sbjct: 12 SIMVTAFALMLGTSAVSAAEPDDVIAKVGETEITEADIAFAAQDLGQELQRFPPSQWRGI 71
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ ++ L Q + I D + F L
Sbjct: 72 LLDVIVDMELLAQAARDADIDKDPD-------------------FQKQL----------- 101
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+L ++++ + + +++ +KQ E R +L
Sbjct: 102 DFLTLRALRNAYIAQKIEGGVSDEDVQAAYDKQFADFEGDEEINARHILVK--------- 152
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQNL-LKKS 253
+K DA + L+ D +L K S + G + + + F+
Sbjct: 153 ---EKAEADAIVAELQGGADFVELAKEKSTGPSGPNGGDLGFFVRGQMVGPFEEAAFALE 209
Query: 254 QNNTT-NPYVTQKGVEYIAICDKR 276
T P TQ G I + +KR
Sbjct: 210 PGAFTIEPVQTQFGWHVIKLEEKR 233
>gi|284046681|ref|YP_003397021.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei
DSM 14684]
gi|283950902|gb|ADB53646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei
DSM 14684]
Length = 390
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 38/361 (10%), Positives = 100/361 (27%), Gaps = 59/361 (16%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD----- 55
M S V +L + L + + + S +++G IT D
Sbjct: 1 MLSSVTKTLRIVLALCAFFVLSFTVAACGGDDESGNDVPSNAVASVDGTPITKADYERWA 60
Query: 56 ----------------------------ISKRIALLKLQKINGELE-------------K 74
+ ++ + + + + +
Sbjct: 61 LINAKSPGAQGSPVIIPDPPNYERCIAALERQSRDARARTTPSDSQLRAQCRQVETQIMQ 120
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
++ LI ++E ++ G++ V + R + D+ SFL + G+ +
Sbjct: 121 QSMALLIQADWIEKEADELGVSVSDADVQRTLEETKRQSFPRRGDYESFLRRSGMTERDI 180
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKL 192
L IQ + + + +I A N+ + + + +L
Sbjct: 181 LFRLRIQDLSTRITEKIQREAGDVTSAQITAYYNRNRDQFAVPERRDLEIILTRTEAQAN 240
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
+ + ++ A +R R D ++ V+ G+ L++
Sbjct: 241 EAKRAIESGTSWAAAAR-RYSTDALSKGN-GGRLLGVARGQQDRALDT-------AAFNA 291
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLRS 310
+ P Q G + + ++ + + ++ ++ +
Sbjct: 292 RTDVIVGPVRGQFGWYIVRVTRVTPAKQNSLAESREQIRELLRQQGSSRKLNDFAREFQE 351
Query: 311 N 311
Sbjct: 352 R 352
>gi|311233706|gb|ADP86560.1| SurA domain protein [Desulfovibrio vulgaris RCH1]
Length = 328
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 32/312 (10%), Positives = 89/312 (28%), Gaps = 44/312 (14%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----- 69
+L VL + ++ A+ + T+NG + + LL+
Sbjct: 11 VLAVLQVLAVTLLLSAGGCADDALPPGVVATVNGHPV-------NMKLLQATHDAYAQSW 63
Query: 70 --------GELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
L + +L+V+ L Q++ G + + +
Sbjct: 64 TGAEGPSVEALRSQYGAVLADLVVQELVLQKLAAVGASVTDAELGAAEAEV--RGDYPEG 121
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
F + L + + +++ L + + + E+ + + + E+
Sbjct: 122 MFEAALVEDYLDLEVWREMLRRRLALTKFAQVVLRSEVAISLEEVESWYRGHQG----EF 177
Query: 179 -LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
L V F + + + + + + K + +++ I +
Sbjct: 178 RLAARVRFIMVEGDTREGVEAAAGAVASGAAPEEVEKAFPGMSG-----NELLIRR---- 228
Query: 238 LESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTP 294
+ +Q L + P + + + + AY + +
Sbjct: 229 --DRIPAAWQKALAALKPGGVSPPIAFEGRWVAFRLIESLPAQDMSVVDAYPVIERRLLE 286
Query: 295 TKIEKHEAEYVK 306
K++ +V+
Sbjct: 287 EKLDAAFDVWVE 298
>gi|32265604|ref|NP_859636.1| hypothetical protein HH0105 [Helicobacter hepaticus ATCC 51449]
gi|32261652|gb|AAP76702.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 276
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 42/300 (14%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGD---ISKRIALLKLQKINGELEKIAVQELI 81
+ S ++ ++ T++G ITD D + + I K++ + +++ + ELI
Sbjct: 5 LLATILFSLVCVSLQAKTYATVDGVAITDKDMEILKQSIPNFNYNKLSEQEKEMLINELI 64
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L + ++ + + N K L I
Sbjct: 65 NRQLILKAAKQEKLDTSKEYTD--------------------------TINSIKDNLLID 98
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK---LQNQGFV 198
W N + N ++ +E R +L ++ V
Sbjct: 99 L-WTKKQANSTQVPTMNDAQLRKIYQENEGEFIDQEGKARHILVKSESEAKEIIKELDKV 157
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNT 257
K +A+ L K + K + G + + P F +
Sbjct: 158 GKAKAEAKFIELANAKSIDPASKQQK-----NGGDLGVFKRAGMDPMFSKAAFDLKPGTY 212
Query: 258 TN-PYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P +TQ G I + K + + K + I+ + ++ LR+ A I
Sbjct: 213 TKEPVLTQFGYHIIYLERKSEPKVIPYKDAKKIIENSIKMQSIQGGMMQKIQALRAKAKI 272
>gi|209521454|ref|ZP_03270162.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
gi|209498110|gb|EDZ98257.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
H160]
Length = 644
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 74/238 (31%), Gaps = 25/238 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + + +L V I ++ + + ++NG IT + D + R L
Sbjct: 5 FRTHQRLMMFMLILVILPGLGFVGIQGFRGFFDENANVASVNGHKITRVEYDDAMRQQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFF 106
+ +++ G E ++ + +I + + E ++ +T + V +
Sbjct: 65 RGRQMLGAQFDMKSFDTPERRRMMLDGMIEQRVLADETQRLHLTASDDAVRRTLMSDPVI 124
Query: 107 VQHARNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
G + + + L QG+ + + + + +
Sbjct: 125 SSLKNPDGSIDLDRYKQLLAMQGMTPDQYDERVRYNLAMQQL-----PASIEASAFTSKT 179
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + + ++ ++ + F D + Q + + R ++
Sbjct: 180 LAQHLTELAQQQREVQGIAFHPHDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQYL 237
>gi|76800245|ref|ZP_00781993.1| Foldase protein prsA precursor [Streptococcus agalactiae 18RS21]
gi|76584547|gb|EAO61412.1| Foldase protein prsA precursor [Streptococcus agalactiae 18RS21]
Length = 257
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 87/267 (32%), Gaps = 37/267 (13%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + + + + + T+ G+ IT D ++ K A Q ++
Sbjct: 12 LTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSML 61
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L + + G V+ + + A+ G S FSS L + G+ +KQ +
Sbjct: 62 TLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNS---FSSALSQAGLTPEGYKQQIRTT 118
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ ++ +K + AN ++ E ++ + D + + + ++
Sbjct: 119 ML------VEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKL---DAEDKAKSVLKDV 169
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ-FQNLLKKSQNNTTNP 260
D D K+ K + D + + L + K +N ++
Sbjct: 170 KAD--------GADFAKIAKEKTTATDKKVEYKFDSAGTTLPKEVMSAAFKLDKNGVSDV 221
Query: 261 YVT------QKGVEYIAICDKRDLGGE 281
T + I + DK + +
Sbjct: 222 VSTVDSTTYKTSYYIIKVTDKTEKKSD 248
>gi|68249587|ref|YP_248699.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
86-028NP]
gi|68057786|gb|AAX88039.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
86-028NP]
Length = 622
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 41/387 (10%), Positives = 114/387 (29%), Gaps = 116/387 (29%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLS----------------------------AED-------------------- 119
+ + L+
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQVKNSAEVFFQKRLARLATLS 200
Query: 120 FSSFLDKQGIGDNHFK-------------QYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ KQ + D+ K + + +Q I D+ ++ ++EI
Sbjct: 201 LEDEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYI--DLSADNISRNLQVTDVEIAQY 258
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Q K + ++L + F+ + +QK A+ ++ + KI
Sbjct: 259 YQDNKAQFMTQHLA-HIQFANEQDAKVAYEELQKGANFADVAKAKS----------LDKI 307
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG------ 279
+ G ++ E++L F++ Q + P + + +++
Sbjct: 308 SGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKA 367
Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEY 304
++ K+ + ++ + + + +
Sbjct: 368 QIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|326391780|ref|ZP_08213299.1| hypothetical protein TheetDRAFT_2540 [Thermoanaerobacter
ethanolicus JW 200]
gi|325992168|gb|EGD50641.1| hypothetical protein TheetDRAFT_2540 [Thermoanaerobacter
ethanolicus JW 200]
Length = 238
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+ +NG I + + R L + + ++ +Q+LI E +++ K I N
Sbjct: 66 VIAEVNGIPIYNNEFELRKGLTLASGVQTDNIDDYILQKLIKEKVQEYLANKYNIKVSQN 125
Query: 101 TVNYFFVQHARNTGLSAED---FSSFLDKQGIGDNHF 134
+N + + + E + G+ ++ +
Sbjct: 126 EINAYIEKEKKEFNEYPEAKKKLDELISTSGMTEDEY 162
>gi|319897486|ref|YP_004135683.1| peptidyl-prolyl cis-trans isomerase d [Haemophilus influenzae
F3031]
gi|317432992|emb|CBY81363.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus influenzae
F3031]
Length = 622
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 40/387 (10%), Positives = 115/387 (29%), Gaps = 116/387 (29%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKIN 69
++ + +V +S ++ + +NGEVI+ D ++R + + +
Sbjct: 21 LITVSFLVGGMSGYLFSSNDTYAAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSD 80
Query: 70 GE-----LEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NYFFV 107
L + V +I + L +Q +++ + + N +
Sbjct: 81 SPEFVTALRQNIVNLMIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQ 140
Query: 108 QHARNTGLS----------------------------AED-------------------- 119
+ + L+
Sbjct: 141 RILQQNHLTSDGYASILRASLPLEQIQNGVANSEFIVPAQVKNSAEIFFQKRLARLATLS 200
Query: 120 FSSFLDKQGIGDNHFK-------------QYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ + KQ + D+ K + + +Q I D+ ++ ++EI
Sbjct: 201 LADEMAKQSVSDDEIKTYYEANQKSFVQPEQVKVQYI--DLSADNISRNLQVTDVEIAQY 258
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
Q K + ++L + F+ + ++K A+ ++ + KI
Sbjct: 259 YQDNKAQFMTQHLA-HIQFANEQDAKVAYEELEKGANFADVAKAKS----------LDKI 307
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG------ 279
+ G ++ E++L F++ Q + P + + +++
Sbjct: 308 SGENGGDLGWVNENELPKAFEDAAAALQVGQYSQPINVDGNYHIVLVQERKAQSLENVKA 367
Query: 280 --GEIALKAYLSAQNTPTKIEKHEAEY 304
++ K+ + ++ + + + +
Sbjct: 368 QIADLVRKSLMESRYFSLEKQASDKAF 394
>gi|268679964|ref|YP_003304395.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurospirillum
deleyianum DSM 6946]
gi|268617995|gb|ACZ12360.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sulfurospirillum
deleyianum DSM 6946]
Length = 270
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 90/267 (33%), Gaps = 46/267 (17%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL---KLQKINGEL 72
+ + I C V +S + + T+NGE +TD DI+ + + K + + +
Sbjct: 1 MKKVILSGIACAVLGMSLNAA-----VYATVNGEDVTDQDIAVLMRAMQGAKFESLPADA 55
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ V++ + L +E KSG+ ++++ L +
Sbjct: 56 KQKIVEQAVERKLLTKEAVKSGVE-------------------KEKEYTDALKR------ 90
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
K+ L+++ + N + + + M+ TV+ R +L
Sbjct: 91 -IKEDLSLELWMKKIYNNVKVDAKEVKDYYDKNADKFMQPATVK---ARHILVK------ 140
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN-LL 250
+ + + S +L +L S G + + + F +
Sbjct: 141 SEEEAKAAIKELSGLSGQKLNDKFVELATTKSTGPSGQGGGDLGWFAANQMVKPFADAAF 200
Query: 251 KKSQNNTT-NPYVTQKGVEYIAICDKR 276
+ T +P TQ G I + D +
Sbjct: 201 ALKKGEYTKSPVQTQFGFHVILVEDTK 227
>gi|186683552|ref|YP_001866748.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme
PCC 73102]
gi|186466004|gb|ACC81805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme
PCC 73102]
Length = 242
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 32/227 (14%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
IT+ DI ++ L V+++I L E++GI + + Q
Sbjct: 7 ITNEDILHQVKL-------SCKIPEIVEQIITRKLIIAAAEEAGIKVEVEELQKAADQIR 59
Query: 111 RNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN--LEMEIPANK 167
L SA+ +L+K + + F++ + I + + F K +E ++
Sbjct: 60 LVNKLDSADRTWQWLEKHSLSLDDFEEIAYLNLISGKLTNHLFADKVEPYFIENQLDYVG 119
Query: 168 QKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
M + + E L + ++I + ++ K I+D E R
Sbjct: 120 VVMYEVVLDDEDLALELFYAIKEGEMSFYDVAHKFIQDTELRRK---------------- 163
Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
G + DL P+ + P VT KG+ I +
Sbjct: 164 ----GGYLGIVRRKDLKPEISAAVFSAKPPQVIKPIVTSKGIHLILV 206
>gi|115375700|ref|ZP_01462954.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1]
gi|115367263|gb|EAU66244.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1]
Length = 204
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 18/189 (9%)
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ A + I + N + E E+ A Y F P+
Sbjct: 2 SLAELRAREANRLIIEKLFTNHVYARVAVTEEELRAA-----------YTAHEAEFQEPE 50
Query: 190 NKLQNQGFVQKRIKDAE--ESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQF 246
Q V+ + +A +++L+ K L + S D +G + + P F
Sbjct: 51 QVHAAQLVVKG-LDEARRVQAQLKAGKKFADLARRYSLSADAKVGGDLGFFPRGQMPPVF 109
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEAE 303
++ ++ T+ G + + + + ++A + A+ K E+
Sbjct: 110 DEVVFNLRPGQVSDVVSTEYGYHLFRVLEFKPARKRDFVEVRAKVEAREVKRKQEEAHEA 169
Query: 304 YVKKLRSNA 312
+ K L A
Sbjct: 170 FEKALLDKA 178
>gi|240851485|ref|ZP_04752236.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor 202]
gi|240310003|gb|EER48295.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor 202]
Length = 624
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 45/171 (26%), Gaps = 19/171 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI---TDGDISKRIALLKLQKINGEL 72
F L+ V + +NGE I T D R + + GE
Sbjct: 14 FKIVFTLVSLSFVLGGIGSGLVATDDSAVKVNGEGISQRTFTDAKNRQQNILYSQKGGEA 73
Query: 73 -------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLS 116
+ + LI + L +Q + + + + +N
Sbjct: 74 WDLLDKPEYAREFNQSVLNSLINDELLRQYAKSLKLDVGVDQIKSEIVHDANFQQNGKFD 133
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ L G+ + + + I+ + + + + K
Sbjct: 134 NNLYQQALRNAGLTPDGYAAVVREGMIFSQIEEGIINTSFDLPAQQEALAK 184
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 40/231 (17%)
Query: 48 GEVITDGDI-SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
G + T D+ +++ AL KL ++ +A L E T + F+
Sbjct: 167 GIINTSFDLPAQQEALAKLLFQKRDVR-LATYSLADEA--------KNQTVSPEELQSFY 217
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
H + L+ E F+ ++ + ++ + + + ++ +
Sbjct: 218 DAHKKQL-LTPETFT--VEYLVLTPKDVEKRI----------------QITDEQIATYYD 258
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K K + +T E + + N+ + Q+ A+ + L K +K +
Sbjct: 259 KNKAQFVTKGEANLAHIQV---ANEAEANAIAQQLNNGADFAALAKEKSTDK-------L 308
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
G + F+N + Q + P I + D++
Sbjct: 309 SAAQGGNLGWAKAGTFPQAFENAANQLQVGQVSQPIKIDNAYHIIKVIDRK 359
>gi|253581345|ref|ZP_04858571.1| peptidylprolyl isomerase [Fusobacterium varium ATCC 27725]
gi|251836709|gb|EES65243.1| peptidylprolyl isomerase [Fusobacterium varium ATCC 27725]
Length = 584
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 47 NGEVITDGDISKR--------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
NG I+ ++ K L + G ++ +A E++ + L + +K +
Sbjct: 56 NGNKISKFEVEKTKVTMIDGYSRYLGDKVDRGLIDILAFDEVVNKNLTLEMADKLKVKVS 115
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
S VN + + + G + + F L QG N FK+ L
Sbjct: 116 SGDVNAQYDKIESSIG-NKDQFKRMLQVQGYTKNTFKKELK 155
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 77/257 (29%), Gaps = 68/257 (26%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISK-RIALLKLQKINGELEKIAVQELI--VETL-- 85
+ + M+ R T+N IT+GD K R + K +L KIA++ I ETL
Sbjct: 249 FAISNVEMAKR---TLNNLFITNGDREKARELSKEYYKAQIKLAKIAIERGITVDETLPL 305
Query: 86 --KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
K +E +K F + + + +K + + F
Sbjct: 306 DYKFEEYKK-----------GLFENIKNSLNPTDAQLKEYFEKNKLVYDTF--------- 345
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ Y + + + K
Sbjct: 346 -----------------------------PSADSY-----IAILKVDPSAEDKAAAKTRA 371
Query: 204 DAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-P 260
+ E + PK+ + +K + + G + + D+ FQ + + P
Sbjct: 372 E-ELLKTLTPKNFAEVAKKNSDGPSSPNGGDLGWFSKKDMVEPFQKAVFAGEVGKIYPEP 430
Query: 261 YVTQKGVEYIAICDKRD 277
T G I I D++D
Sbjct: 431 VETIFGQHLIYIEDRKD 447
>gi|319406090|emb|CBI79720.1| peptidyl-prolyl cis-trans isomerase [Bartonella sp. AR 15-3]
Length = 317
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 32/216 (14%), Positives = 64/216 (29%), Gaps = 35/216 (16%)
Query: 115 LSAEDFSSFLDKQGIGDNH--------FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
L + + ++G+ + + Q + ++V + K + +++ N
Sbjct: 93 LDMQALAKAALQKGVDKTEAYDKRMAIMRDNILQQLYFKEMV----VDKIADADVKALYN 148
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K+ E R +L + + KR+ E+ KD
Sbjct: 149 KEIAALPKEDEIKARHILVKTKE----EAEKIIKRLNKGEKFEEIAKKDSTDG------- 197
Query: 227 HDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDKR----DLGG 280
G Y + F+ T P + G I I D+R +
Sbjct: 198 SSAVGGDLGYFSRGQMVKSFEEAAFNLKVGEYTKKPIESPFGWHVIKIEDRRLKQPPVFD 257
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
++ K L Q + + + LRS + Y
Sbjct: 258 DV--KEVLRTQLIRERYQTL----ITDLRSKVNVEY 287
>gi|209965938|ref|YP_002298853.1| peptidyl-prolyl cis-trans isomerase family protein, putative
[Rhodospirillum centenum SW]
gi|209959404|gb|ACJ00041.1| peptidyl-prolyl cis-trans isomerase family protein, putative
[Rhodospirillum centenum SW]
Length = 315
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 31/216 (14%), Positives = 67/216 (31%), Gaps = 27/216 (12%)
Query: 117 AEDFSSFLDKQGIGDNHFKQYL--------AIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
++ + FK L +++ V+ F+ K + +M K+
Sbjct: 84 PAVLEQVVNAHLVTQAGFKDKLQDTTEVKQRLKAAEERFVQEAFLKKAIDAKMSDALVKK 143
Query: 169 K-----MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
K +N E R +L + + +++ A+ ++L + +
Sbjct: 144 KFDEWLKENPPQDEVRARHILVQTKEEA---EALIKQIKGGADFNKLAADQKIDTAAAQQ 200
Query: 224 SKIHDVSIGKAQYLLESDL-HPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGE 281
G Y + + P + + + P TQ G I + DKR
Sbjct: 201 Q-------GDLGYFTKDQMVEPFAKAAFAMKPGDVSQTPVETQFGWHVIKVEDKRKQTPP 253
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+A + + + V+ LR A + +
Sbjct: 254 TYEEAAPELRQVVAQ--DIAGDVVEGLRKQAKVEMF 287
>gi|25010882|ref|NP_735277.1| foldase protein PrsA [Streptococcus agalactiae NEM316]
gi|77409622|ref|ZP_00786296.1| rotamase family protein [Streptococcus agalactiae COH1]
gi|77413120|ref|ZP_00789320.1| rotamase family protein [Streptococcus agalactiae 515]
gi|46396916|sp|Q8E602|PRSA_STRA3 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|23095261|emb|CAD46471.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160821|gb|EAO71932.1| rotamase family protein [Streptococcus agalactiae 515]
gi|77171768|gb|EAO74963.1| rotamase family protein [Streptococcus agalactiae COH1]
Length = 309
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 82/260 (31%), Gaps = 23/260 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + + + + + T+ G+ IT D ++ K A Q ++
Sbjct: 12 LTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSML 61
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L + + G V+ + + A+ G S FSS L + G+ +KQ +
Sbjct: 62 TLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNS---FSSALSQAGLTPEGYKQQIRTT 118
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ ++ +K + AN ++ E ++ + + +
Sbjct: 119 ML------VEYAVKEAAKKELTEANYKEAYKNYTPETSVQVI--KLDAEDKAKSVLKDVK 170
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
A+ +++ K +K K + ++ + + + Y
Sbjct: 171 ADGADFAKIAKEKTTATDKKVEYKFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTY 230
Query: 262 VTQKGVEYIAICDKRDLGGE 281
T I + DK + +
Sbjct: 231 KTSY--YIIKVTDKTEKKSD 248
>gi|31789450|gb|AAP58564.1| conserved hypothetical protein [uncultured Acidobacteria bacterium]
Length = 434
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 59/210 (28%), Gaps = 24/210 (11%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSS-------FLDKQGIGDNHFKQYLAIQSIWP 145
+G V+ FF Q A + F + L + + K + Q
Sbjct: 116 AGPNITEQEVDEFFKQPANQAK--FDQFINDAKAKNPQLASGQVPEEQLK-QVKRQLGQV 172
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN----------- 194
+ ++ + + + + + + + + + L
Sbjct: 173 LIGESKGIAAGSDKKRSVELQIKLEQARILAQTYAQEQLAEKMKATDAEIDAYIAQHPDL 232
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF-QNLLK 251
+ + R++ +D KL K S G + + + P+F Q
Sbjct: 233 DAKQNRGKAEEVLKRVKAGEDFAKLAKEFSTDPGSKEKGGDLGWFAQGAMVPEFEQAAFA 292
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
++ + G I + +++ +
Sbjct: 293 LKPGEVSDLVESSFGYHIIKVEERKTETKD 322
>gi|126445541|ref|YP_001062970.1| rotamase [Burkholderia pseudomallei 668]
gi|126225032|gb|ABN88537.1| peptidylprolyl isomerase [Burkholderia pseudomallei 668]
Length = 220
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 67 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 110
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L + +N + ++ + P
Sbjct: 111 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDEARNEIDAIVKSGFSMPIRGS 170
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 171 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 213
>gi|291279447|ref|YP_003496282.1| peptidyl-prolyl cis-trans isomerse D [Deferribacter desulfuricans
SSM1]
gi|290754149|dbj|BAI80526.1| peptidyl-prolyl cis-trans isomerse D [Deferribacter desulfuricans
SSM1]
Length = 626
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 84/243 (34%), Gaps = 20/243 (8%)
Query: 53 DGDISKRIALLKLQK-INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
D + + +L+L E+ +L+V+ K + ++ + N + ++ +
Sbjct: 127 QFDAKRYVEILRLNGLTPASFERSIKADLLVQKTKNLITQ--SVSVNENEIKNEYIYRNK 184
Query: 112 NTGLSAEDFSSFLDKQGIGD--NHFKQYL-----------AIQSIWPDVVKNDFMLKYGN 158
+S +S K+ + K Y I+ + + DF +
Sbjct: 185 TAKISYIKLNSEKFKKDVTYNDEELKAYFEKNKEDYRVPEKIKLKYIKIDPKDFNKEIKV 244
Query: 159 LEMEIPAN-KQKMKNITVRE-YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ EI Q +E + +L + D + + K+ + +++
Sbjct: 245 SDEEIEKYYLQHTDEFIEKEKVAAKHILIRVKDWNNKKEVAEAKKKIENILQKIKKGAKF 304
Query: 217 NK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICD 274
+K++ + G Y + + +F++++ K + ++ T+ G I +
Sbjct: 305 EDLAKKYSDDPTAKNGGDLGYFTKGQMIKEFEDVVFKLKPGDISDIVKTKFGYHIIKVYG 364
Query: 275 KRD 277
+
Sbjct: 365 HKP 367
>gi|172064366|ref|YP_001812017.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
gi|171996883|gb|ACB67801.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
Length = 282
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 47/320 (14%), Positives = 92/320 (28%), Gaps = 60/320 (18%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F ++L + + +S ++ + T+NG ITD +++ A+L+ K
Sbjct: 5 FNRILIATAIAWQMALPVQAEAQSASLPAGSVATVNGTPITDAEVN---AVLQASKQPDT 61
Query: 72 L--EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +LI L +Q EK+ V Q A+ +
Sbjct: 62 PQIRQAIKNQLIAHVLIQQAAEKAKYGGKP-EVQAAM-QVAKAN--AEAQL--------- 108
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ K + + VK + G+L E ++ + + D
Sbjct: 109 ---YLKDNIKPSPVTDAQVKARYDEIVGSLGKE----------------EVKPRIIVVKD 149
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL---------ES 240
Q + +++ + G+ ++
Sbjct: 150 AATAATVLAQLKAGQ---------TFEALARQYSQAPTAGAGGELPWVSFKMPLVEGNTQ 200
Query: 241 DLH-PQFQNLLKKSQNNTTNPYVT--QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPT 295
L P Q + K T + + I KR + ++ + Q
Sbjct: 201 GLPLPVAQAMTKLPAGGVTADSIPLGNGARAIVKIDAKRPTQVPAYDTAQSTIRQQLQAL 260
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
EK AE V L +A I
Sbjct: 261 AFEKATAELVGGLLKDAKIQ 280
>gi|150025240|ref|YP_001296066.1| peptidyl-prolyl cis-trans isomerase precursor [Flavobacterium
psychrophilum JIP02/86]
gi|149771781|emb|CAL43255.1| Probable peptidyl-prolyl cis-trans isomerase precursor
[Flavobacterium psychrophilum JIP02/86]
Length = 658
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 8/170 (4%)
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ Y + A ++ N +++E +L ++ +N +
Sbjct: 96 RTQLSKNYTSDTKVTKALIEEGYNRSLKEIRASHILITVDENAVPADTLKAYNQAIDIRK 155
Query: 209 RLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQK 265
+ + + L S+ G Y + F+ + + + P T+
Sbjct: 156 KALVGEKFEDLAVTFSQDPSSKENKGDLGYFSAFRMIYPFETVAYNTKKGQISMPVRTKF 215
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I I D R+ GEI + + ++ + E E ++ A I
Sbjct: 216 GYHLIYITDSRENRGEITVAHIMILKSPKAESEITTTE-----KAKATIQ 260
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 44/146 (30%), Gaps = 8/146 (5%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKLEKFASKIHDVS--IG 232
E + ++ +K ++ +L + L S+ + + G
Sbjct: 231 EITVAHIMILKSPKAESEITTTEKAKATIQDIYTKLKQGENFESLASQFSQDKNSAPKGG 290
Query: 233 KAQYLLESDLH-PQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
L +F+N N + P+ +Q G + + +K+ + ++ L
Sbjct: 291 LLPRFASGQLSSEEFENAAFALTKPNEYSAPFESQFGWHIVKLVEKQPIKKLNEMEKELD 350
Query: 290 AQNTPTKIEKH-EAEYVKKLRSNAII 314
+ + KLR I
Sbjct: 351 EKIRKDDRSRLITNSLTNKLRKKYTI 376
>gi|322389168|ref|ZP_08062729.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis
ATCC 903]
gi|321144073|gb|EFX39490.1| peptidyl-prolyl cis-trans isomerase [Streptococcus parasanguinis
ATCC 903]
Length = 314
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 33/306 (10%), Positives = 96/306 (31%), Gaps = 36/306 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ V ++ +V+ + A + + T+ G+ IT D +++ G +
Sbjct: 1 MKKKLVAGAVTLLSVVTLAACANGTNKDIVTMKGDTITVSDF-----YNEIKTNQG--AQ 53
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ++ + + ++E G V+ + A+ F ++L +QG+ +
Sbjct: 54 QVLFQMTINKVFEKE---YGSKVSDKEVDK---ELAKQKKQLGNRFDAYLAQQGLTEETA 107
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
K+ + + V + + + + + +
Sbjct: 108 KKQIRSNMLLEYAVNQAAKKDIKESDYKAAFESYTPE--------VTAQIIKLDSEDKAK 159
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKS 253
+ + + A+ +++ + K G +D+ Q + K
Sbjct: 160 EVLEAAKAEGADFAQIAKDNSTDTTTKDKGGEVKFDSG------TADIPSQVKEAAFKLD 213
Query: 254 QNNTTNPYVTQKG------VEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+N ++ G + + K + G + K + K + Y++
Sbjct: 214 ENGISDVITVSAGQNYSASYYIVKLNKKTEKGSDW-KKYEKRLKEIIVDGRKQDTNYIRS 272
Query: 308 LRSNAI 313
+ + A+
Sbjct: 273 IIAKAM 278
>gi|254478727|ref|ZP_05092097.1| hypothetical protein CDSM653_484 [Carboxydibrachium pacificum DSM
12653]
gi|214035341|gb|EEB76045.1| hypothetical protein CDSM653_484 [Carboxydibrachium pacificum DSM
12653]
Length = 238
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSN 100
+ +NG I + R L + + ++ +Q+LI E +++ K I +
Sbjct: 66 VIAEVNGIPIYKNEFELRKGLALASGVQADNIDDYVLQKLIKEKVQEYLASKYNIRVSES 125
Query: 101 TVNYFFVQHARNTGLSAED---FSSFLDKQGIGDNHF 134
+N + + + E ++ G+ ++ +
Sbjct: 126 EINEYIEKEKKEFNEYPEAKKKLDELINASGMTEDEY 162
>gi|188586230|ref|YP_001917775.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350917|gb|ACB85187.1| SurA domain [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 255
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 38 MSSRIRTTINGEVITDGDISK---------RIALLKLQKIN----GELEKIAVQELIVET 84
+ + +NGE I ++S+ ++ + +L++ + EL +A++ELI T
Sbjct: 43 IEQDVVAVVNGEEIMYEELSQTKEQLAFQMQMPIDQLEEQDDEMMNELRDMAMEELIGGT 102
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L QE E G+T D V Q+ G S E+ L ++ + ++ + +
Sbjct: 103 LLAQEAEAEGLTPDEEEVEKNLEQYTAQFGESEEEIEENLAQEDLTMEDLREDVTQSLMI 162
Query: 145 PDVVKNDFMLKYGNLEMEIPANK 167
+++ + E +
Sbjct: 163 TEIMDEKIEVDEDVDVSEEEVRE 185
>gi|76788083|ref|YP_329554.1| foldase protein PrsA [Streptococcus agalactiae A909]
gi|123601968|sp|Q3K1P9|PRSA_STRA1 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|76563140|gb|ABA45724.1| foldase protein PrsA [Streptococcus agalactiae A909]
gi|319744849|gb|EFV97187.1| peptidyl-prolyl cis-trans isomerase [Streptococcus agalactiae ATCC
13813]
Length = 309
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 82/260 (31%), Gaps = 23/260 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + + + + + T+ G+ IT D ++ K A Q ++
Sbjct: 12 LTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSML 61
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L + + G V+ + + A+ G S FSS L + G+ +KQ +
Sbjct: 62 TLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNS---FSSALSQAGLTPEGYKQQIRTT 118
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ ++ +K + AN ++ E ++ + + +
Sbjct: 119 ML------VEYAVKEAAKKELTEANYKEAYKNYTPETSVQVI--KLDAEDKAKSVLKDVK 170
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
A+ +++ K +K K + ++ + + + Y
Sbjct: 171 ADGADFAKIAKEKTTATDKKVEYKFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTY 230
Query: 262 VTQKGVEYIAICDKRDLGGE 281
T I + DK + +
Sbjct: 231 KTSY--YIIKVTDKTEKKSD 248
>gi|319941683|ref|ZP_08016006.1| hypothetical protein HMPREF9464_01225 [Sutterella wadsworthensis
3_1_45B]
gi|319804804|gb|EFW01666.1| hypothetical protein HMPREF9464_01225 [Sutterella wadsworthensis
3_1_45B]
Length = 260
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 81/281 (28%), Gaps = 61/281 (21%)
Query: 46 INGEVITDGDISKRI----ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+NGE T ++ A+ + Q ELE LI +T QE +K+ I +
Sbjct: 28 VNGE--TVSVAEQKAVYDRAVAQGQPAGPELESQVKNLLIQQTALLQEAKKAKIQ-QNAD 84
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V + L + W K +
Sbjct: 85 VQRAIDN--ARNQI----LIQGLAQD----------------WAK--------KNPVSDA 114
Query: 162 EIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
++ + K EY +R +L D SRL D KL
Sbjct: 115 DLQKAYEADKASYGDTEYQVRHILVKTEDQ------------AKNLISRLAKGADFGKLA 162
Query: 221 KFAS--KIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTT-NPYVTQKGVEYIAICDKR 276
+ S + G +++ P F P TQ G + + KR
Sbjct: 163 QEFSEDTANKAQGGLLGWVVPRSFVPAFGAAFSALKPGEVAQAPVRTQFGFHVVKLEAKR 222
Query: 277 DL---GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ KA + K+++ + ++L A++
Sbjct: 223 KAELYPSFDSQKAVIHNALANQKVQQ----HFQELIKRAVV 259
>gi|295397248|ref|ZP_06807346.1| peptidyl-prolyl cis-trans isomerase [Aerococcus viridans ATCC
11563]
gi|294974529|gb|EFG50258.1| peptidyl-prolyl cis-trans isomerase [Aerococcus viridans ATCC
11563]
Length = 376
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 88/291 (30%), Gaps = 25/291 (8%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
K + ++ + + S T +G +T+ ++ A LK N
Sbjct: 3 ISKKFKLTSIALLSTVALAACSTGSSDGSSAVATGDGVEVTNEELQ---AELKSTYGNTV 59
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L+K+ ++E+ V + ++ + V + ++F++ L G D
Sbjct: 60 LQKLIMEEVFVNEVGDDRAKELKEEATT-EVETLIATYGGE-----DEFNTVLASSGFSD 113
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
++ Q + ++ + EI Q + + + +L
Sbjct: 114 ---REDYEHQVYYYKLMSESVSKYIEVTDEEI----QTAYDDYTPSFTVSHILV------ 160
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
++ + I ++ +S + S+G+ F +
Sbjct: 161 -DDEETAKDLIAQLDDGADFAELAKENSTDTSSAKNGGSLGE-VNADSGLDETFFAAAQE 218
Query: 252 KSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
++ TT P T G I + +K + G L K+
Sbjct: 219 LAEGEYTTAPVETDYGYHIIKMDEKPEKGSLEDETEQLKESIVAEKLTDST 269
>gi|219856704|ref|YP_002473826.1| hypothetical protein CKR_3361 [Clostridium kluyveri NBRC 12016]
gi|219570428|dbj|BAH08412.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 258
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 76/269 (28%), Gaps = 40/269 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + + +N IT+ D + ++ ++L+ E + + G
Sbjct: 12 MQNNVLAIVNNVEITENDFKNVVKRFPAERQQYFNTDEGKKQLLDEIISFELFYNYGKEI 71
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ E +L + K+ L IQ +++N +
Sbjct: 72 E------------------LEKDRDYL----VKLETTKKELLIQETISKIMEN-IKVTDK 108
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+E NK K R +L + Q ++K + +
Sbjct: 109 EVEDYYTNNKSMYKKPEN--ITARHILVDSFEKAAQISNEIKKGLSFEDA---------- 156
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+K++S G + P+F+ + + P TQ G I + K
Sbjct: 157 -AKKYSSCPSKAQGGNLGNFTRGQMVPEFETAAFQLEIGILSKPVKTQFGYHLIKVEKKE 215
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEA 302
+ A + + ++
Sbjct: 216 KDSIKGFDKVKNAIKNGLLQEKRTLEYSK 244
>gi|167742962|ref|ZP_02415736.1| putative rotamase [Burkholderia pseudomallei 14]
Length = 190
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 37 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 80
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 81 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 140
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 141 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 183
>gi|262370474|ref|ZP_06063800.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046]
gi|262314816|gb|EEY95857.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter johnsonii SH046]
Length = 621
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 113/326 (34%), Gaps = 28/326 (8%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIAL 62
S IK +LI+F + SS ++NG+ I++ ++ A
Sbjct: 1 MESFRKVIKGWLGKALLILFLTPLALVGIEGYFSSGSKDAVKSVNGQDISEKELETLTAS 60
Query: 63 LK---LQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ--- 108
K L NG+ ++ A+ +LI TL Q+ EK GI+ + Q
Sbjct: 61 FKEQFLAYANGDETLLNQSFIKDKAMDQLIANTLLLQQAEKLGISLSDTQIEQMIAQQPS 120
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
N S +SS+L G+ + L ++++ F+ +++I Q
Sbjct: 121 FQENGKFSETRYSSYLQSVGMSSDALVANLRQDHAL-KMMRSTFVDYALVSKLDI----Q 175
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
++ N+ + ++ ++ + K + Q+ ++ + + +
Sbjct: 176 QIANLQTEQRTVQFANVNLDEYKKNVKVSAQEIENYYKQHPAMFKQVASVDVDYVLLAPA 235
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAY 287
A + +++L + ++ ++N + D R D + +
Sbjct: 236 NVPAAASPVTDAELQQAYTQFVEAQKDNVAPLVK-----HILITTDARTDAEAKKRAEEV 290
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAI 313
++ T A+Y + S A
Sbjct: 291 VAKIKAGTSFAAAAAQYSEDTASKAN 316
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 16/169 (9%), Positives = 51/169 (30%), Gaps = 7/169 (4%)
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
++ +N +SA++ ++ + FKQ ++ + + + + +
Sbjct: 194 LDEYKKNVKVSAQEIENYYKQH---PAMFKQVASVDVDYVLLAPANVPAAASPV-TDAEL 249
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS- 224
+ + + ++ + ++ I K+ + ++++ S
Sbjct: 250 QQAYTQFVEAQKDNVAPLVKHILITTDARTDAEAKKRAEEVVAKIKAGTSFAAAAAQYSE 309
Query: 225 -KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
+ G + F Q + + P T+ G I
Sbjct: 310 DTASKANGGALAVYNKGTFGDAFDQAVASLKSGQVSAPVKTEFGYHVIE 358
>gi|296532547|ref|ZP_06895259.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
gi|296267124|gb|EFH13037.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
Length = 330
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 82/299 (27%), Gaps = 60/299 (20%)
Query: 32 SYKSWAMSSR---IRTTINGEVITDGDISKRIALLKLQKINGELEKI--------AVQEL 80
+ A + R + ++G + DI L ++ GEL + +L
Sbjct: 42 QAQGNAQAQRPNPVVARVDGAELRRSDIEA-----ALSQLPGELRAAPPQMLFPLVLDQL 96
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + G+ D V + E L ++ I
Sbjct: 97 IAQQALVNAARAQGLDKDP-EVQAAIRRAEE------EQLQQALLRRAIAPA-------- 141
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ P+ ++ + +++ E R +L + V
Sbjct: 142 --LTPEALRARY-------------DREIAGKPGEEEVHARHILTATEAEARAALEEV-- 184
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT- 258
R A+ + + + + G + + D+ P+F +
Sbjct: 185 RRPGADFAEVARRRSTGPGTQQ--------GGDLGFFKKGDMVPEFAEAAFALQPGQISQ 236
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
P + G I + ++R + + + E+ V+ + A + +
Sbjct: 237 APVRSAFGWHIIKVEERR--TAPVPSFEESAEELRKAAFEEAVNAAVESTVAAARVERF 293
>gi|188534628|ref|YP_001908425.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Erwinia
tasmaniensis Et1/99]
gi|188029670|emb|CAO97549.1| Peptidyl-prolyl cis-trans isomerase D [Erwinia tasmaniensis Et1/99]
Length = 622
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 67/218 (30%), Gaps = 38/218 (17%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NG+ I+ + + R ++ ++ + + +LI E L
Sbjct: 41 AAKVNGQEISRAQLERAFSSERARQQQMLGEQFSVLASNEGYMQQMRQQTLSQLIDEVLL 100
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-----SSFLDKQGIGDNHFKQYLAIQ 141
Q + G+T + + + +A F S ++ G + + + L Q
Sbjct: 101 TQYAKDIGLTIGDDQIKQAI--FTQPAFQTAGQFDNAKYLSIINNIGFSADQYAEALRKQ 158
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
++ + + + + ++ L+R V + + ++
Sbjct: 159 LTTQQLINA-----VTKTDFVLGNEADSLAALVSQQRLVREVTIDVNALAAKQDVTQEEI 213
Query: 202 ----------IKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ +E+ R+ K + A D+
Sbjct: 214 SNYYQQHQSSLMSSEQFRVSYIKMDAAAMEQAVSESDI 251
>gi|152990776|ref|YP_001356498.1| hypothetical protein NIS_1031 [Nitratiruptor sp. SB155-2]
gi|151422637|dbj|BAF70141.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 490
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 17/151 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----------- 61
I + + + V +YK + +S + E IT + +R A
Sbjct: 14 ITIWISTIAFVGAGFVGWGAYK-YGSASDAVAEVGNEKITLKEFQQRYANVYNYYNKMLQ 72
Query: 62 --LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA---RNTGLS 116
L + Q L+K+ + ELI E L + G+ V +N
Sbjct: 73 GKLDQEQAKKMGLDKMVLNELIQEALLENYAHDLGLIVTDEEVAQKIASMKVFWQNGHFE 132
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
++ L + I F+Q + + + +
Sbjct: 133 KSLYNKLLQQNRIKPKDFEQSIRKELLLNKL 163
>gi|94263261|ref|ZP_01287077.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta
proteobacterium MLMS-1]
gi|93456344|gb|EAT06468.1| PpiC-type peptidyl-prolyl cis-trans isomerase [delta
proteobacterium MLMS-1]
Length = 630
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 12/134 (8%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
R +L DN +K A R R D +L S+ + G +
Sbjct: 267 ARHILIRSADNDSPELRASRKEQLRAVLERARAGHDFAELVALYSEDARAAGGDLGFFQR 326
Query: 240 SDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY-----------IAICDKRDLGGEIALKAY 287
++ + ++ T+ G + + + RD +
Sbjct: 327 DEMVEPIEEAAFALEPGEISDIVETRFGFHILKLDELQPARQLELAEVRDEIADRLQDEE 386
Query: 288 LSAQNTPTKIEKHE 301
+ ++ E +E
Sbjct: 387 IQDESFARAGEAYE 400
>gi|260682966|ref|YP_003214251.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196]
gi|260686564|ref|YP_003217697.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291]
gi|296451354|ref|ZP_06893092.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296880296|ref|ZP_06904261.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
gi|260209129|emb|CBA62320.1| putative peptidyl-prolyl isomerase [Clostridium difficile CD196]
gi|260212580|emb|CBE03572.1| putative peptidyl-prolyl isomerase [Clostridium difficile R20291]
gi|296259770|gb|EFH06627.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296428739|gb|EFH14621.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
Length = 261
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 83/276 (30%), Gaps = 53/276 (19%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKS 93
M ++ T+ + IT+ DI + L +Q E +K + +L+ + L + ++
Sbjct: 11 MEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKEE 70
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
D + L+ + I +N KQ+ N +
Sbjct: 71 --KLDEEEIFK-------------------LEMKKIEENVLKQF----------AINKVL 99
Query: 154 LKYGNLEMEI----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
E E ANK + +L D+ + + + + +
Sbjct: 100 SSVNVTEDEKVKFFEANKSSFSKPESA--TAKHILV---DSDEKAKEILAQIKSEEISFE 154
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
+ K +S G + P+F+ + ++ + P TQ G
Sbjct: 155 -------DAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYH 207
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
I + D ++ E + +K Y
Sbjct: 208 IIKLEDLQEST-ESTFDEVKAEVEKSLLYQKQNEVY 242
>gi|226329062|ref|ZP_03804580.1| hypothetical protein PROPEN_02965 [Proteus penneri ATCC 35198]
gi|225202248|gb|EEG84602.1| hypothetical protein PROPEN_02965 [Proteus penneri ATCC 35198]
Length = 276
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 21/153 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI--RTTINGEVITDGDISK--RIALLKLQKINGE 71
+ +I + + SS + +NG I+ + + + +LQ+ GE
Sbjct: 13 FIKILLAVIILSFVLTGVGGYLFSSGVNDAAEVNGYKISRSQLEQAYQQRRAQLQQDMGE 72
Query: 72 --------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV-NYFFV--QHARNTG 114
+ + A+ LI + L Q +K GI+ + + F N
Sbjct: 73 NFAALASSEEGQKLIRQQALDLLINQALLDQFAQKLGISAGDQQIRDAIFALPYFQTNGK 132
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ + L I + F + + I +
Sbjct: 133 FDNKKYVDLLKGNNIDADAFAEGIRQNLINQQL 165
>gi|167923109|ref|ZP_02510200.1| putative rotamase [Burkholderia pseudomallei BCC215]
Length = 190
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 37 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--VLTVPG--------------EADALRL 80
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 81 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 140
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 141 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 183
>gi|319892874|ref|YP_004149749.1| Foldase protein PrsA precursor [Staphylococcus pseudintermedius
HKU10-03]
gi|317162570|gb|ADV06113.1| Foldase protein PrsA precursor [Staphylococcus pseudintermedius
HKU10-03]
gi|323464093|gb|ADX76246.1| foldase protein PrsA [Staphylococcus pseudintermedius ED99]
Length = 318
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 85/241 (35%), Gaps = 30/241 (12%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
N ++ + + L+ + L+K+ +K + ++ + F S L +QG
Sbjct: 53 NEQIASQSFKVLLNKILEKKYGDKVDQKQIDKETDEEIEKYGGK-----KQFESLLKQQG 107
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ + +K+ +V E+ K K I +L +
Sbjct: 108 MTIDDYKEQ-------RKLVSYQ-------KELLNEKVKVSDKEIKESTKKASHILIKVK 153
Query: 189 DNKLQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDL 242
+K +G K K + + PKD +K+ K S D + G Y+++ +
Sbjct: 154 QDKDDKEGLSDKDAKKKIDEIKEKLDKNPKDFDKIAKEESMDSTKDKN-GSLGYVIKGQM 212
Query: 243 HPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
F+ L K + ++ T+ G I ++ + K+ L + K+++
Sbjct: 213 VKPFEEALFKLKEGQISDVVKTEYGYHI--IRADKEDDFDK-EKSKLKEKIIQNKLQEDP 269
Query: 302 A 302
Sbjct: 270 K 270
>gi|170702053|ref|ZP_02892969.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria IOP40-10]
gi|170133039|gb|EDT01451.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria IOP40-10]
Length = 644
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQRE 193
>gi|167723994|ref|ZP_02407230.1| putative rotamase [Burkholderia pseudomallei DM98]
gi|167828511|ref|ZP_02459982.1| putative rotamase [Burkholderia pseudomallei 9]
gi|167898574|ref|ZP_02485975.1| putative rotamase [Burkholderia pseudomallei 7894]
gi|167906920|ref|ZP_02494125.1| putative rotamase [Burkholderia pseudomallei NCTC 13177]
gi|167915279|ref|ZP_02502370.1| putative rotamase [Burkholderia pseudomallei 112]
Length = 180
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 27 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 70
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 71 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 130
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 131 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 173
>gi|134277039|ref|ZP_01763754.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
305]
gi|134250689|gb|EBA50768.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
305]
Length = 644
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|78222137|ref|YP_383884.1| hypothetical protein Gmet_0917 [Geobacter metallireducens GS-15]
gi|78193392|gb|ABB31159.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length = 549
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Query: 180 IRTVLFSIPDNKLQNQG--FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL 237
+ + + + + +K+ ++A+ + KL++ S D
Sbjct: 403 LAQIRAKVEERAKAVRAVELAKKKAEEAQAKLAKGDTAGLKLQETGSFAFDAKGNVPVIG 462
Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPT 295
+L L K+ P + ++ +L A K + + P
Sbjct: 463 TSPELMEAAFTLTDKAPAP-QAPVKIGNRWVAFRLKERTELNAAAFPAEKEKIKQELLPK 521
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
K E+ +++K+LR+ A I
Sbjct: 522 KQEEELQKWLKELRAKAKIE 541
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSSF 123
+ L+K A+ LI L ++ + G+ V +N + + +
Sbjct: 104 EKQLNLKKQALDSLIDAALLRKAAKDMGVKVSEEEVQKAIAAIPAFQKNGAFDSAQYFAV 163
Query: 124 LDKQGIGDNHFKQ 136
L + F+
Sbjct: 164 LKANRLAPKEFEA 176
>gi|283834240|ref|ZP_06353981.1| peptidylprolyl cis-trans isomerase D [Citrobacter youngae ATCC
29220]
gi|291069758|gb|EFE07867.1| peptidylprolyl cis-trans isomerase D [Citrobacter youngae ATCC
29220]
Length = 624
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 42/344 (12%), Positives = 92/344 (26%), Gaps = 82/344 (23%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNGQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYF-----------------FVQHARNTGLSAEDFSSFLDKQ-- 127
Q + + + V + G++A+ ++ L Q
Sbjct: 102 DQYSRELKLNISDDQVKQAIFTTPSFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLT 161
Query: 128 -------------------------------------GIGDNHFKQYLAIQSIWPDVVKN 150
+ KQ + Q + +N
Sbjct: 162 TQQLINSVAGTDFMLKGETDELAALVAQQRIVREATIDVNALAAKQSVTDQEVTSYYEQN 221
Query: 151 D------FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++++ A ++ + ++ Y + + + K +
Sbjct: 222 KNNFMTPEQFRVSYIKLDAAAMQETASDADIQSYYDQHQDQFTQPQRNRYSIIQTKTEDE 281
Query: 205 AEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
A+ L D L K S I G +L ES + +N K + +
Sbjct: 282 AKAVLDELNKGGDFAALAKEKSADIISARKGGDMGWLEESTTPDELKNAGLKEKGQLSGV 341
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ G + D + + +A + + +A Y
Sbjct: 342 IKSSVGFLVARLDDVQPAQVKPLSEARDDIAAKVKQEKALDAYY 385
>gi|126698956|ref|YP_001087853.1| putative peptidyl-prolyl isomerase [Clostridium difficile 630]
gi|254974902|ref|ZP_05271374.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-66c26]
gi|255092291|ref|ZP_05321769.1| putative peptidyl-prolyl isomerase [Clostridium difficile CIP
107932]
gi|255100375|ref|ZP_05329352.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-63q42]
gi|255306317|ref|ZP_05350488.1| putative peptidyl-prolyl isomerase [Clostridium difficile ATCC
43255]
gi|255314029|ref|ZP_05355612.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-76w55]
gi|255516709|ref|ZP_05384385.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-97b34]
gi|255649808|ref|ZP_05396710.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-37x79]
gi|255655366|ref|ZP_05400775.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-23m63]
gi|306519909|ref|ZP_07406256.1| putative peptidyl-prolyl isomerase [Clostridium difficile
QCD-32g58]
gi|115250393|emb|CAJ68215.1| putative peptidyl-prolyl isomerase [Clostridium difficile]
Length = 251
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 83/276 (30%), Gaps = 53/276 (19%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKS 93
M ++ T+ + IT+ DI + L +Q E +K + +L+ + L + ++
Sbjct: 1 MEKKVLATVGEKEITNIDIENALKSLDPYQAMQFKTEEGKKHLLNDLVNQELFFLDAKEE 60
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
D + L+ + I +N KQ+ N +
Sbjct: 61 --KLDEEEIFK-------------------LEMKKIEENVLKQF----------AINKVL 89
Query: 154 LKYGNLEMEI----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
E E ANK + +L D+ + + + + +
Sbjct: 90 SSVNVTEDEKVKFFEANKSSFSKPESA--TAKHILV---DSDEKAKEILAQIKSEEISFE 144
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
+ K +S G + P+F+ + ++ + P TQ G
Sbjct: 145 -------DAALKHSSCPSKDMGGDLGTFGRGQMVPEFEEAVFSMAKGEVSEPVKTQFGYH 197
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
I + D ++ E + +K Y
Sbjct: 198 IIKLEDLQEST-ESTFDEVKAEVEKSLLYQKQNEVY 232
>gi|126452826|ref|YP_001066614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1106a]
gi|242317337|ref|ZP_04816353.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1106b]
gi|126226468|gb|ABN90008.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1106a]
gi|242140576|gb|EES26978.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1106b]
Length = 644
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|53719046|ref|YP_108032.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei K96243]
gi|76809896|ref|YP_333865.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
1710b]
gi|254189176|ref|ZP_04895687.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
Pasteur 52237]
gi|254259824|ref|ZP_04950878.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
1710a]
gi|52209460|emb|CAH35412.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei K96243]
gi|76579349|gb|ABA48824.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
1710b]
gi|157936855|gb|EDO92525.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
Pasteur 52237]
gi|254218513|gb|EET07897.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
1710a]
Length = 644
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|255036260|ref|YP_003086881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
fermentans DSM 18053]
gi|254949016|gb|ACT93716.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dyadobacter
fermentans DSM 18053]
Length = 774
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 3/108 (2%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGK 233
+E +L + ++ R A RL D + SK + G
Sbjct: 141 QEVRASHILVGVSEDASPADTLEAHRAAIALRGRLEEGSDFADMASRFSKDPAAKTTRGD 200
Query: 234 AQYLLE-SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
Y L+P + P T+ G I + D+R G
Sbjct: 201 LGYFTAFQTLYPIETAAYTLPVGKISQPVRTKAGYHLIKVNDRRTNRG 248
>gi|39997188|ref|NP_953139.1| hypothetical protein GSU2090 [Geobacter sulfurreducens PCA]
gi|39984078|gb|AAR35466.1| hypothetical protein GSU2090 [Geobacter sulfurreducens PCA]
gi|298506201|gb|ADI84924.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length = 527
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 58/195 (29%), Gaps = 14/195 (7%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSS 122
+ ++K A+ L+ L + GI + V N S +
Sbjct: 82 LEKQLNVKKQALDTLVEGALVRNAARDMGIKVSKDDVQQAIAAMPSFQVNGAFSFNQYVQ 141
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
L I F++ + + ++ + + E +K + Y
Sbjct: 142 VLKANRIAPKEFEEGQKDELMIKKA-QDQIKSRATVSDDEARELFRKRNDRLAISY---- 196
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY--LLES 240
+ + + ++ ++ + + D EK + V K + E+
Sbjct: 197 ----VSYSPDDVKAEIKLTDQELTDFLAKNQNDFKTPEKISITYVMVDPLKVGGLEVSEA 252
Query: 241 DLHPQFQNLLKKSQN 255
D+ +Q + + Q
Sbjct: 253 DIQAWYQKNIDRYQG 267
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 24/187 (12%)
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK--LQNQGFVQKRI 202
++++ F+LK G L + K YLI+ + Q + V+++
Sbjct: 341 TELIRRAFILKEGELGGPVETKKGI--------YLIKIKERKPAEVPPLAQIRAQVEEKA 392
Query: 203 KDAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYL---------LESDLHPQFQNLLKK 252
K A+ L K K A +++ + + K
Sbjct: 393 KTAKAVDLAKKKAEEAQAKLAKGDSTGLTLRDSGPFAFDAKGNIPTVGASPELMEAAFKL 452
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIA----LKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + G +IA K A K + + P K + +++++L
Sbjct: 453 TTAAPAPKEPIRVGARWIAFRLKERTELNAANFAAQKEKIKQEILPRKQDDEYRKWIEEL 512
Query: 309 RSNAIIH 315
RS A I
Sbjct: 513 RSKAKIE 519
>gi|197118887|ref|YP_002139314.1| hypothetical protein Gbem_2510 [Geobacter bemidjiensis Bem]
gi|197088247|gb|ACH39518.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 526
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 60/180 (33%), Gaps = 17/180 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQ----- 66
++ F+ IF + KS + ++G I+ D K R L Q
Sbjct: 20 VIVLSFIGTIFLVWGRGGDKSANGPAGYAAMVDGTKISMDDFQKNYYRTRNLYEQIYGRS 79
Query: 67 -----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ L+K + +I L +E +K GI D + V + A DF+
Sbjct: 80 LTPEMEKQMGLKKATISSMIDNVLTLKEAKKMGIKVDKDEVAAEIAKIPSFQNNGAFDFT 139
Query: 122 ---SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
+ L + F++ + +N K + ++ +K + +Y
Sbjct: 140 LYQNTLKANRVTPKEFEETQEQDLL-VQKARNKVKEKATVTDADLMQEFKKQNDKVNLQY 198
Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 34/125 (27%), Gaps = 10/125 (8%)
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
+K+ ++A + + + F + +
Sbjct: 401 AEVAKKKAEEALQQLSKAGAATKETGNFGYSPAGAIP------TVGTSPELMEAAFALTP 454
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIA----LKAYLSAQNTPTKIEKHEAEYVKKLRS 310
N + G + A+ K + A + P K ++ +++K LR
Sbjct: 455 ANPVAKQPVKVGERWYAVKLKNRVEAPTTDFAKASATIKQTLLPKKQQEELDKWLKGLRD 514
Query: 311 NAIIH 315
A I
Sbjct: 515 KAKID 519
>gi|78485440|ref|YP_391365.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
gi|78363726|gb|ABB41691.1| peptidyl-prolyl cis-trans isomerase D [Thiomicrospira crunogena
XCL-2]
Length = 638
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 92/276 (33%), Gaps = 18/276 (6%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
NG + + +R L++ Q + + + + ++ + V+
Sbjct: 141 NGLNVARFEYEQRQFLIENQNRQLTMASAITND--TQLAQLAALQFQQRKVNYLRVDQ-- 196
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV---KNDFMLKYGNLEMEI 163
+ ++ ++ ++ +K H + ++ + + V K D K + +
Sbjct: 197 RPFMQEAQITDDEIQTYYNK------HKEDFITPEQVVLSYVLLSKKDLADKVSVDDAIL 250
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q K+ + + + + QK IK+ +++L +D L K
Sbjct: 251 KRFYQDNKDQFTQPEKRQASHILVKVDAESQDAEAQKTIKEI-QAKLADGEDFAALAKTY 309
Query: 224 SKIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
S + G + + P F + + N ++P T+ G I + +
Sbjct: 310 SDDPGSANMGGDLGLFQQGMMVPAFDKAVFSMKLNEISDPVKTEFGYHLIKLTKIQPKKM 369
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + + + ++ + +Y +L I Y
Sbjct: 370 QAFNEVKAEVETLYRR-QQADKQYFDELEQLNTIAY 404
>gi|126439578|ref|YP_001059347.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
668]
gi|126219071|gb|ABN82577.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
668]
Length = 644
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|121601506|ref|YP_993264.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
SAVP1]
gi|124383444|ref|YP_001029291.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
NCTC 10229]
gi|126449228|ref|YP_001080774.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
NCTC 10247]
gi|167738127|ref|ZP_02410901.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia
pseudomallei 14]
gi|217421364|ref|ZP_03452868.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 576]
gi|237812671|ref|YP_002897122.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
MSHR346]
gi|251766653|ref|ZP_04819742.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
PRL-20]
gi|254179433|ref|ZP_04886032.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
1655]
gi|254198164|ref|ZP_04904586.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei S13]
gi|254297318|ref|ZP_04964771.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
406e]
gi|254358198|ref|ZP_04974471.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
2002721280]
gi|121230316|gb|ABM52834.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
SAVP1]
gi|124291464|gb|ABN00733.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
NCTC 10229]
gi|126242098|gb|ABO05191.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
NCTC 10247]
gi|148027325|gb|EDK85346.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
2002721280]
gi|157806973|gb|EDO84143.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
406e]
gi|169654905|gb|EDS87598.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei S13]
gi|184209973|gb|EDU07016.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
1655]
gi|217395106|gb|EEC35124.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 576]
gi|237505475|gb|ACQ97793.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia pseudomallei
MSHR346]
gi|243065067|gb|EES47253.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
PRL-20]
Length = 644
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|110636617|ref|YP_676824.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC
33406]
gi|110279298|gb|ABG57484.1| possible peptidyl-prolyl cis-trans isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 773
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 84/283 (29%), Gaps = 50/283 (17%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
F ++ + L Y + + +S T+ + I+ D K
Sbjct: 5 FWIIASALSGLFVYSCVSDKTATSSSKKSTAPAASPAILTVADDSISTEDFK--YIYDKN 62
Query: 66 QKINGEL-EKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
+ + + +++E I L+ +E E G+ + F
Sbjct: 63 NGKSADAYSRQSIEEYIDLYTKFKLRVKEAESLGLD-------------------TTAAF 103
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L +++ LA ++ + G +M + ++MK E
Sbjct: 104 KQELAG-------YQKQLA----------QPYLTEKGVTDMLVKQAYERMKE----EIRA 142
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLL 238
+L + A R ++ ++L S+ G Y
Sbjct: 143 SHILIFCNPEATPKDTLIAYNKIVALRERALKGENFDQLAAQYSEDPSAKTNKGDLGYFT 202
Query: 239 ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
+ +F+ ++ + + P T+ G + + D+R G
Sbjct: 203 ALSMVYEFEEAAYNTKVGSVSKPVRTKFGYHILKVVDRRPSQG 245
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 4/139 (2%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+ + + + ++ + K D L+ N+L S +
Sbjct: 240 RRPSQGQIHVAHIMARYSQGMSAEDSILAKNKIDQIYKELQAGTSWNELCGEFSDDVNSR 299
Query: 231 I--GKAQYLLESDLHPQFQNL--LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
G+ Q+ + P F+N + T P T G I + +++ LG L+
Sbjct: 300 SKNGELQWFSTGKMIPSFENAAFTLTTPGQYTTPVQTPYGWHIIKLLERKPLGSFEELEP 359
Query: 287 YLSAQNTPTKIEKHEAEYV 305
+ A+ T + +
Sbjct: 360 SIRAKVTKDSRSDLNKKML 378
>gi|325282949|ref|YP_004255490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
proteolyticus MRP]
gi|324314758|gb|ADY25873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
proteolyticus MRP]
Length = 652
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 84/280 (30%), Gaps = 13/280 (4%)
Query: 46 INGEVITDGDISKRIA------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+NG+ IT + K + + + + + +++ + L Q I
Sbjct: 50 VNGKAITAEKLQKIQDNNPSPFASQGKALQDDFRTFMISQVVRQELMVQAARD--INVTR 107
Query: 100 NTVNYFFVQHARNTGLSAE-DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
VN + L+ + ++ L + G+ D+ +++ + +
Sbjct: 108 EDVNAEVTKVREQNNLTDDAAWTDALQRVGLSDSEYREQVKEGLAVQRKNEAIEAAVPAA 167
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E E+ + E +R + D K + Q R A+ + L
Sbjct: 168 TEQEMKTYYDLNPTLFQTEQRLRGRQIVVDDEKKARELLAQAR-GGADFAELAKKNSTEN 226
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN-NTTNPYVTQKGVEYIAICDK-- 275
E + G Q + L + ++ T+ + + + +
Sbjct: 227 AENGGALGALGEGGALQPVEPVVLPEEVAAAVQALPAPGLTDVVASGGRFYVVKVEELLP 286
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ +K + + +K ++ + + A I
Sbjct: 287 PETKPFETVKEEVKTELEKSKKRAAVEAFMDEQLAGAKIE 326
>gi|154148381|ref|YP_001406634.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381]
gi|153804390|gb|ABS51397.1| foldase protein PrsA [Campylobacter hominis ATCC BAA-381]
Length = 275
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 53/305 (17%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQE 79
F I + + ++++ + T ITD DI L+ +NG E +K ++
Sbjct: 4 FLISTLSLVAAISLNADVLATAGDIKITDEDI---TPFLEQNHMNGIDINDEQKKALLEN 60
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI L +E + SG+ N + ++ + ++A+ + L + N FK+
Sbjct: 61 LIKYKLLVKEAKNSGVE---NEL-----EYKKRLDIAADGIAFGLWQD----NEFKK--- 105
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + E + + + + +L + + K +
Sbjct: 106 --------------VNVSDDEAKKFYEENNASFVIPEQISASHIL--VKEEKEAKNIISK 149
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVS---IGKAQYLLESDLHPQFQN-LLKKSQN 255
E+ K ++ I + + G + + + F+ + +
Sbjct: 150 LSKLKGEKLSKEFAKIASE-----KSIDNGTKQNGGALGFFQKGQMVEPFEKAVFGLKKG 204
Query: 256 NTT-NPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T P TQ G I D++ E A ++ K +K E + L
Sbjct: 205 ELTKQPVKTQFGYHIILKTDEKKASTLPFESVKNAIINN-IKGQKFQKQIDEKAEALYKA 263
Query: 312 AIIHY 316
A + +
Sbjct: 264 ANVQF 268
>gi|253996686|ref|YP_003048750.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera
mobilis JLW8]
gi|253983365|gb|ACT48223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera
mobilis JLW8]
Length = 632
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 14/139 (10%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI-----------TDGDISKRIALLKLQK 67
F+ + F + I SY S A ++ ++G I + + Q
Sbjct: 19 AFITVPFALFGIDSYLSQAGNNAAIAKVDGSEISVQAYANAMQNLRSRMQAEGKADQAQL 78
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN---YFFVQHARNTGLSAEDFSSFL 124
N E++ + + +LI E L ++EI+++ + ++ S E + L
Sbjct: 79 DNPEVKAMVLDQLINEQLLEKEIQRANYKISDAQLATYITAMPSFQKDGKFSQELYDELL 138
Query: 125 DKQGIGDNHFKQYLAIQSI 143
+ F+ + +
Sbjct: 139 QQNRYTPKKFEAEIRATLL 157
>gi|237508070|ref|ZP_04520785.1| peptidylprolyl isomerase [Burkholderia pseudomallei MSHR346]
gi|235000275|gb|EEP49699.1| peptidylprolyl isomerase [Burkholderia pseudomallei MSHR346]
Length = 240
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 25/167 (14%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 87 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 130
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 131 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 190
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G + + DKRD+ + Q ++ +LRS
Sbjct: 191 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELRSA 235
>gi|226941162|ref|YP_002796236.1| peptidyl-prolyl cis-trans isomerase [Laribacter hongkongensis
HLHK9]
gi|226716089|gb|ACO75227.1| Probable peptidyl-prolyl cis-trans isomerase [Laribacter
hongkongensis HLHK9]
Length = 243
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 78/278 (28%), Gaps = 46/278 (16%)
Query: 44 TTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN 103
T+NG IT+ I + + +Q+L++ TL Q+ ++G+
Sbjct: 3 ITVNGVEITEEMIKAQQD---NFADASDPRDATIQQLVLHTLLLQKAREAGLDTSDEA-- 57
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
A L + + + +++ +
Sbjct: 58 ------AAINAL----LEQSIRYEPATEATCREF---------------------YDTYP 86
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
Q + +LF + D++L K E + + + +
Sbjct: 87 ERFSQGESAV------ASHILFPLGDDELAKVVMRGKAEGVLAEVQAEPSRFADLARVHS 140
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN-PYVTQKGVEYIAICDKRDLGGE 281
+ G + F++ + + T TQ G I + D+ G
Sbjct: 141 TCPSGREGGSLGEFGRGQMVKPFEDAVFSTPAGEITPQLVETQFGFHIIQVQDRTQGGAV 200
Query: 282 IALKAYLSAQNTPTKIEKHEA--EYVKKLRSNAIIHYY 317
Q T + +A EY+ L A I Y
Sbjct: 201 AFDDIKERLQQYLTDLAARQAMHEYLSGLVDAAKIEGY 238
>gi|70726122|ref|YP_253036.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus haemolyticus
JCSC1435]
gi|68446846|dbj|BAE04430.1| peptidyl-prolyl cis/trans isomerase [Staphylococcus haemolyticus
JCSC1435]
Length = 324
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 84/246 (34%), Gaps = 34/246 (13%)
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
L K +K D+ ++ + + G + F S L +QG+ + +K+
Sbjct: 63 ALNKILADKYKDKVDTKDIDDEIKKEQKQYGGK-DQFESMLKQQGMSLDDYKEQ------ 115
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF------ 197
+ L +++ K+ K + +L + + +G
Sbjct: 116 -KKLAAYQKQLLADKVKVSDKELKENTKKAS-------HILIKVKSSSSDKEGLSDKKAK 167
Query: 198 --VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQ 254
+K K+ E++ + + K +S G Y+++ + +F+ L K +
Sbjct: 168 EKAEKIQKEVEKNPDKFGEIAKKESMDSSSAK--KDGSLGYVVKGQMVSKFEKALFKLKE 225
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK----HEAEYVKKLRS 310
++ T G I ++ + K+ L A+ K++K Y K L
Sbjct: 226 GQVSDVVKTDYGYHVIK--ADKESDFDK-QKSKLKAKLIEQKVQKDPKILTNAY-KDLLK 281
Query: 311 NAIIHY 316
+ Y
Sbjct: 282 EYDVDY 287
>gi|313201268|ref|YP_004039926.1| ppic-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
MP688]
gi|312440584|gb|ADQ84690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
MP688]
Length = 632
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 80/254 (31%), Gaps = 18/254 (7%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+ + + R LL Q G + E I + E ++ +T +
Sbjct: 146 SQFESTMRTDLLVQQAREGLAALAYLPEPISKQTLATEHQQREVTI--AEIKT--ADFLD 201
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFK--QYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NK 167
+ ++ D+ + FK + + ++ + N+ + K + E+ ++
Sbjct: 202 QVKVDEAQIKAYYDQH---KDKFKVPEQVKLEFV--LFSSNNLIPKVQVSDEEVKKYYDE 256
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASKI 226
K + +L S + K+ + +++R P L K SK
Sbjct: 257 NAAKFQGNEQRRASHILISFGVSATAEAKQQAKKQAEEVLAQVRQHPDQFADLAKKYSKD 316
Query: 227 HDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEI 282
+ G + F++ + +N ++ G I + + G
Sbjct: 317 PGSAEKGGDLGSFGRGMMVKPFEDAVFSMKPGEISNLVESEFGYHIIKLTEITGQSQGFD 376
Query: 283 ALKAYLSAQNTPTK 296
A K + A+ K
Sbjct: 377 AAKPQIKAELLYQK 390
>gi|134295955|ref|YP_001119690.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
gi|134139112|gb|ABO54855.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
vietnamiensis G4]
Length = 646
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + + ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGTIDVQRYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKGPAQRLSELAAQQRE 193
>gi|268316847|ref|YP_003290566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
gi|262334381|gb|ACY48178.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
Length = 684
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 77/291 (26%), Gaps = 54/291 (18%)
Query: 34 KSWAMSSRIRTTINGEVI--TDGDIS-KRIALLKLQKINGELE--KIAVQELIVETLKKQ 88
+ A + + EVI T + R +L+ + L+ + ++ + L+ Q
Sbjct: 23 TNPAENPEVVAVAGSEVIDLTTFEDQYARSVGNRLEAADDSLQAYQDFLERYVNYRLRVQ 82
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E G DS V SA + +L Q + ++
Sbjct: 83 EARARGYDRDSAIVAEA----------SAYQLELA-----------RNHLMRQEVIEPLL 121
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + ++ I + +P + R A
Sbjct: 122 RTLYARMPDMVD-------------------ISHIFVRVPTDATPEDTLAAYRRLQALID 162
Query: 209 RLRLPKDCNKLEKFASKIHDVSI--------GKAQYLLESD-LHPQFQNLLKKSQNNTTN 259
+R D N++ S G ++ + P +
Sbjct: 163 SVRQGADFNEIAFRHSDDPSARSPRSTRGGWGHIGWIKMGQTIEPMETYAFNTPVGELSP 222
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ T+ G + + D++ ++ + + + LR
Sbjct: 223 IFRTRYGYHVLKVHDRKPAPYDVRAAHIMITPAPTPEDSARVRRTLDSLRQ 273
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 51/138 (36%), Gaps = 7/138 (5%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSIGKAQYLLESD 241
+ P ++ V++ + + L D +L + S+ G YL +
Sbjct: 250 IMITPAPTPEDSARVRRTLDSLRQLVLSGKADFAELARQHSEDWRTKSRGGDLGYLSFAQ 309
Query: 242 -LHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTK 296
+ ++ L K + ++ T G+ + D+R + E A L+ + +
Sbjct: 310 PMPVMVRDTLFALKEIGDVSHIVTTPFGLHIFQLKDRRPIPPTFEAAYDTLLTVADRLGR 369
Query: 297 IEKHEAEYVKKLRSNAII 314
+++ +V +LR +
Sbjct: 370 LQEARNRFVAQLRRRLHV 387
>gi|149372555|ref|ZP_01891667.1| possible peptidyl-prolyl cis-trans isomerase [unidentified
eubacterium SCB49]
gi|149354598|gb|EDM43162.1| possible peptidyl-prolyl cis-trans isomerase [unidentified
eubacterium SCB49]
Length = 653
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 32/278 (11%), Positives = 82/278 (29%), Gaps = 55/278 (19%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKING 70
+K+ + F+L++ + S S + TI+G + + + + L +Q +
Sbjct: 3 LKITSILFMLLVTLVA------SAQKKSDVIMTIDGNPVYANEFVRVYQKNLELVQDESQ 56
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF--FVQHARNTGLSAEDFSSFLDKQG 128
+ + + LK E + G+ + + F + + L
Sbjct: 57 KSVDGYLDLFVDYKLKVAEAYEQGLNNNDDYRKEFSKYEEQLSRNYL------------- 103
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
++ + + + + + +L
Sbjct: 104 -----YEDKVTTDLAKLAYERGKY------------------------DLKVAHILVRSS 134
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQF 246
+ + + R +D L S+ + G Y + QF
Sbjct: 135 YDDVPQDTLKAYNKIKEALDKARSGEDFGTLAGTYSEEPGAAERGGDIGYFSTFTMVHQF 194
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+++ ++ ++ TQ G + + DKR+ +I
Sbjct: 195 EDMAYETPVGEISDIVRTQFGYHILKVEDKRERSPDIT 232
>gi|160947370|ref|ZP_02094537.1| hypothetical protein PEPMIC_01304 [Parvimonas micra ATCC 33270]
gi|158446504|gb|EDP23499.1| hypothetical protein PEPMIC_01304 [Parvimonas micra ATCC 33270]
Length = 328
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 30/232 (12%), Positives = 74/232 (31%), Gaps = 23/232 (9%)
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
E ++EI K ++ +N + G + F+ L+K + ++ K +
Sbjct: 103 DEGKSEEEIAK--VSVTEQEINDNLAKVKEQLG---DKFNEELEKAKLTEDELKYKIEDN 157
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ F Y + EI K K + + +L ++ + +
Sbjct: 158 LYSTKF-QTWFSENYDPTDEEI-MEKYKGSDFDGPQINASHILVENEEDAKKVK------ 209
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
SRL + + SK + G + + +F + +K +
Sbjct: 210 ------SRLEAGEKFEDVATEVSKDPSAKKNKGVLGTFTKGVMVKEFYDAAVKLKVGEIS 263
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+P T+ G I + + + + + ++ + K ++ +
Sbjct: 264 DPVKTKFGYHIIKLNEIVEDYDKFSDESKKRIKQ-NLKKSLLSEKFKTEFEK 314
>gi|22536972|ref|NP_687823.1| foldase protein PrsA [Streptococcus agalactiae 2603V/R]
gi|46396914|sp|Q8E0C6|PRSA_STRA5 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|22533826|gb|AAM99695.1|AE014228_16 protease maturation protein, putative [Streptococcus agalactiae
2603V/R]
Length = 309
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 19/201 (9%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L + + + + + T+ G+ IT D ++ K A Q ++
Sbjct: 12 LTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSML 61
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L + + G V+ + + A+ G S FSS L + G+ +KQ +
Sbjct: 62 TLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNS---FSSALSQAGLTPEGYKQQIRTT 118
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ ++ +K + AN ++ E ++ + D V+
Sbjct: 119 ML------VEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAEDKAKSVLKDVKAD 172
Query: 202 IKDAEESRLRLPKDCNKLEKF 222
D + +K ++
Sbjct: 173 GADFAKIAKEKTTATDKKVEY 193
>gi|126653292|ref|ZP_01725403.1| hypothetical protein BB14905_08958 [Bacillus sp. B14905]
gi|126589966|gb|EAZ84095.1| hypothetical protein BB14905_08958 [Bacillus sp. B14905]
Length = 323
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 93/261 (35%), Gaps = 38/261 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI-----RTTINGEVITDGDISKRIALLKLQKING 70
L+ VL++ I+ +++ S I I+G+VIT ++ ++ +++ G
Sbjct: 31 LSVIAVLLLGNILWFIAWAIPNKSQEIGSDEQVAAIDGDVIT-----RQEWMIAMEERYG 85
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
K +Q L+ E++ ++ + I ++ + + F + + Q +
Sbjct: 86 ---KETLQNLVNESVMEKAAKTYKIKVTDQEIDLELALM----RSAQDKFDTAM--QNLS 136
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+Q + Q I V+ D ++ ++E N+ T Y +
Sbjct: 137 AEQLRQKIRSQLILDKVLTKDVVISEESIEKYYEENQGLYN--TKTSYRTNFI------- 187
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLE--SDLHPQF 246
K+ D L+ D + L + S G +L E ++ P
Sbjct: 188 -----EVDAKKAADEALGELKNGSDFSVLAREISLDSASASLGGDVGFLTENQENVDPAI 242
Query: 247 QNLLKKSQ-NNTTNPYVTQKG 266
N +K ++ N + + G
Sbjct: 243 INAVKSTKANEVSKAFKLDNG 263
>gi|257470876|ref|ZP_05634966.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium ulcerans ATCC
49185]
gi|317065078|ref|ZP_07929563.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313690754|gb|EFS27589.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 584
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 10/125 (8%)
Query: 47 NGEVITDGDISKR--------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
NG I+ ++ K L + ++ +A E++ + L + +K +
Sbjct: 56 NGNKISKFEVEKTKATMIDGYSRYLGDKVDRSLIDILAFDEVVNKNLTLEMADKLKVKVS 115
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ VN + + + G + + F L QG N FK+ L +
Sbjct: 116 NGDVNDQYDKIENSIG-NRDQFKRMLQVQGYTKNTFKKELKDNLTVEQTL-AKIQEGINP 173
Query: 159 LEMEI 163
+ EI
Sbjct: 174 TDEEI 178
>gi|209963457|ref|YP_002296372.1| peptidyl-prolyl cis-trans isomerse, putative [Rhodospirillum
centenum SW]
gi|209956923|gb|ACI97559.1| peptidyl-prolyl cis-trans isomerse, putative [Rhodospirillum
centenum SW]
Length = 622
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 42/385 (10%), Positives = 103/385 (26%), Gaps = 81/385 (21%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M + ++ +I + ++ F + I + R + IT ++ +
Sbjct: 1 MLQAIRSTAGSWIAKILFILLIASFAVWGIGDFTRGL--GRHVAEVGDVQITPQELDQEF 58
Query: 59 RIALLKLQKINGE--LEKIA---------VQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
R + +L+++ G + A +Q+++ TL + G+ V
Sbjct: 59 RDEVTRLRRVMGADLTAEQARAFGLLERTLQQMVQRTLVSLAGQDKGLMPSDAMVADEIR 118
Query: 108 Q---HARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------- 150
+ G + + L + G+ + + + ++ +
Sbjct: 119 RVPVFHNQLGQFDPDLMRALLRQNGMTEQGLVEQVRADMARGQLLGSVSIGAILPTTLAE 178
Query: 151 ---DFMLKYGNLEMEIPANKQKMKNI------------------TVREY--------LIR 181
F + ++ + T EY
Sbjct: 179 TLFRFRNEKRVADLITVPATAMPEPAAPDASVLAQYHQDRAVRYTAPEYRSLTVAKLTAE 238
Query: 182 TVLFSIPDNKLQNQGFVQKRIKD--AEESRLRLPKDCNKLEKFASKIHDVSIG------- 232
+ I + + R + A E R + S V+ G
Sbjct: 239 AIAGDITVSDADIEQAYSARASEFVAPERRAVVQAVLPDEAAAKSVADAVAGGASLEQAA 298
Query: 233 --------KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ L P+ + + SQ + P + G + + G E
Sbjct: 299 KAAAAEAIDLGEVTRDQLLPELVEPVFGLSQGAISAPVESTLGWHVLTVRGITP-GHERP 357
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKKL 308
L A + Q ++ + + ++
Sbjct: 358 L-AEVRDQVVADLRKERALDRLYEV 381
>gi|322385853|ref|ZP_08059496.1| peptidyl-prolyl cis-trans isomerase [Streptococcus cristatus ATCC
51100]
gi|321270138|gb|EFX53055.1| peptidyl-prolyl cis-trans isomerase [Streptococcus cristatus ATCC
51100]
Length = 376
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ +F +V + + A I T+ GE IT + K NG +++ +Q
Sbjct: 27 AVTLFSVVALAACSQTAKDKDI-VTMKGETITVSE------FYDQVKNNGSSQQVLLQMA 79
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + + EK G V F + G F + L + G+ ++ ++ +
Sbjct: 80 IKQVFE----EKYGKKVTDKEVEEAFEKMKSAYG---SAFQNVLAQSGMTEDAYRDQIRA 132
>gi|323491007|ref|ZP_08096201.1| hypothetical protein GPDM_16601 [Planococcus donghaensis MPA1U2]
gi|323395363|gb|EGA88215.1| hypothetical protein GPDM_16601 [Planococcus donghaensis MPA1U2]
Length = 313
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 90/266 (33%), Gaps = 30/266 (11%)
Query: 15 LLTTYFVLIIFCIVPIVS--YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+L VL++F I+ ++ + + +++GE IT + L + +
Sbjct: 28 VLMVIGVLLLFNILWFIAWLIPNDTGKAEKVASVSGEAITREE--------WLASMEEQH 79
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ A+ EL+ E + + GI ++ + + + + D
Sbjct: 80 GREALLELVNEKVMATAAQDYGIEVSDKEIDLELALVRSSRDGTEAALYT------VDDA 133
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDN 190
++ + Q I V+ D +++ + EI A +++ Y R ++
Sbjct: 134 RQREKIKAQLILEKVLTKDVVIE----KEEIKAFYDDNESLYDVKDSYRTRIIVL----- 184
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
+ ++ IK+ E+ + A+ IG + +
Sbjct: 185 --NSSAEAEETIKELEKGSSFEATARERSIDSATGNLGGDIGYISNGEPGVDANVAKAVS 242
Query: 251 KKSQNNTTNPYVTQKG-VEYIAICDK 275
K ++P + G I++ +K
Sbjct: 243 KVEVGGWSSPLPLETGKTAIISVTEK 268
>gi|237746606|ref|ZP_04577086.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes HOxBLS]
gi|229377957|gb|EEO28048.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes HOxBLS]
Length = 647
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 57/161 (35%), Gaps = 12/161 (7%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+K + +++ + + + E + +L ++ N ++ K+ + ++L+
Sbjct: 246 NVKISDADLQSYYEQNRDRFSIPEERRAQHILIAVAKNASDSEKAEAKKKAEELLAQLKA 305
Query: 213 -PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
P +L K S+ + G + + F + + + ++P T G
Sbjct: 306 DPSRFAELAKAHSQDPGSARNGGDLGFFTRGKMVKPFNDAVFGMKKGEISDPVQTDFGYH 365
Query: 269 YIAICDKRDLGG-------EIALKAYLSAQNTPTKIEKHEA 302
IA+ D + + L+ L Q T K +
Sbjct: 366 LIAVTDIKPAVAKPLSQVKDSVLQ-ELKRQETSKKFAEMSE 405
>gi|237730418|ref|ZP_04560899.1| peptidyl-prolyl cis-trans isomerase [Citrobacter sp. 30_2]
gi|226905957|gb|EEH91875.1| peptidyl-prolyl cis-trans isomerase [Citrobacter sp. 30_2]
Length = 624
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 49/366 (13%), Positives = 101/366 (27%), Gaps = 82/366 (22%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE------- 71
++I+ I+ VS + +NG+ I+ G ++Q+ G+
Sbjct: 20 IIIVSFILTGVSGYLIGGGNNFAAKVNGQEISRGQFENAFNSERNRMQQQLGDQYSELAA 79
Query: 72 -------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FV 107
L + + L+ E L Q + + + V +
Sbjct: 80 NEGYMKTLRQQVLNRLVDEALLDQYSRELKLNISDDQVKQAIFATPAFQVDGKFDNNRYN 139
Query: 108 QHARNTGLSAEDFSSFLDKQ--------GIGDNHF-----KQYLAIQSIWPDVVK----- 149
G++A+ ++ L Q G+ F LA +V+
Sbjct: 140 AIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQRIVREATID 199
Query: 150 -NDFMLKYGNLEMEI--------------------------PANKQKMKNITVREYLIRT 182
N K E E+ A ++ + ++ Y +
Sbjct: 200 VNALAAKQSVTEQEVASYYEQNKNNFMTPEQFRVSYIKLDAAAMQETASDADIQSYYDQH 259
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKDCNKLEKFASK--IHDVSIGKAQYLL 238
+ + K +A+ L D L K S I G +L
Sbjct: 260 QDQFTQPQRNRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARKGGDMGWLE 319
Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
+S + +N K + + + G + D + + +A + +
Sbjct: 320 DSTTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDVQPAQVKPLSEARDEIAAKVKQEK 379
Query: 299 KHEAEY 304
+A Y
Sbjct: 380 ALDAYY 385
>gi|312129915|ref|YP_003997255.1| ppic-type peptidyl-prolyl cis-trans isomerase [Leadbetterella
byssophila DSM 17132]
gi|311906461|gb|ADQ16902.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Leadbetterella
byssophila DSM 17132]
Length = 768
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 89/300 (29%), Gaps = 52/300 (17%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEV---------ITDGDISKRIALLKLQKINGE 71
+L F + + + S++ E IT ++S I L + K++
Sbjct: 10 LLSPFLLFSCAKPTTTSDKSQVLVVKEEEPKVVELASGGITRKELS--IDLENMVKLDSG 67
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ +QEL+ L E G+ N
Sbjct: 68 SHEEILQELLQRKLFIAEARSQGMDTTEN------------------------------- 96
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
F++ + V + ++E A ++ +K + + P
Sbjct: 97 --FREQIQSHLSLA--VASALEDHSEIRKLENEAYERYLKEVNASHLFV----PISPYAA 148
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLL 250
+ + + ++ + ++++ S G+ + L ++ +
Sbjct: 149 PADTLKLYNELLQIRNMAIQNKDFETQAKRWSKDPKTASSGGQLGWFSVFYLVYPLESAV 208
Query: 251 KKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
K + + P T G I + D R G + ++ ++ ++ + + LR
Sbjct: 209 YKVPKDSISLPVRTPAGYHLIKVNDIRKSSGMVQIQHIFKHIGPESEDKETLRKQLDSLR 268
>gi|226197150|ref|ZP_03792727.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei Pakistan 9]
gi|225930529|gb|EEH26539.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei Pakistan 9]
Length = 644
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|156935006|ref|YP_001438922.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Cronobacter
sakazakii ATCC BAA-894]
gi|156533260|gb|ABU78086.1| hypothetical protein ESA_02857 [Cronobacter sakazakii ATCC BAA-894]
Length = 625
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 75/276 (27%), Gaps = 66/276 (23%)
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDK 126
EL + A+Q LI E L Q + V + + +++ +
Sbjct: 85 AELRQRALQGLIDEALIDQYARSLHLNISDEQVRQSIFKNPAFQSDGKFDNARYNAIITS 144
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKN---------------------DFMLKYGNLEMEIPA 165
G+ + + Q L Q +V ++ + ++ A
Sbjct: 145 MGMSADQYAQALRNQLTTDQLVSAVMGSDFILPGESDQFAALFAQQRQVRTATIAVDALA 204
Query: 166 NKQKMKNITVREYLIRTV-------LFSIPDNKLQNQGFVQKRIKDAEES---------- 208
KQ++ +++Y + F + KL + +D ++
Sbjct: 205 QKQQVSEQEIKDYYQQHTNNFQSPEQFRVSYIKLDAAALAENASEDEIQAYYDKHQDEFG 264
Query: 209 ---RLRLPKDCNKLEKFASKIHDV----------------------SIGKAQYLLESDLH 243
R R K E A I + G +L
Sbjct: 265 QPQRNRYSLIQTKTEDEAKAILAQLKQGADFATLAKEKSVDVITARNGGDMGWLEPGTTP 324
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+F+N K + ++ + G + + D
Sbjct: 325 DEFKNAGLKEKGQLSDVIKSSVGFLIVRLDDITPAT 360
>gi|317047179|ref|YP_004114827.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. At-9b]
gi|316948796|gb|ADU68271.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pantoea sp. At-9b]
Length = 622
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 87/280 (31%), Gaps = 39/280 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKIN----------------GELEKIAVQELIVETLK 86
+NG I+ ++ + + ++ ++ + A+ +LI + L
Sbjct: 42 AAKVNGHEISRAELDQAYNTERNRQQQMLGDQFSQLASNEGYMQQMRQQALSQLIDQALL 101
Query: 87 KQEIEKSGITFDSNTV-NYFFVQHARNTGLSAE--DFSSFLDKQGIGDNHFKQYLAIQSI 143
Q I+ I + V + F Q A T + ++ + G + + + L Q
Sbjct: 102 DQYIKDLHIGISDDQVKDAIFNQQAFQTNGKFDNVKYNGLITSMGFTADQYAEALRKQLA 161
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ N + + K+ ++ ++ IR + N ++ +
Sbjct: 162 TQQLINA-----VANTDFMLKGETSKLVDLVAQQREIRQATIDV------NALAAKQTVT 210
Query: 204 DAEESR--LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
D E S+ + E+F + Q + + + + + P
Sbjct: 211 DDEISQYYQQHQNSFMAPEQFRVSYIKMDAASLQENASEADIQSW---FDQHKADYSQPQ 267
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ V I K + L A ++ T +
Sbjct: 268 RNRYSV----IQTKTEADANAVLDALKKGEDFATLAKSKS 303
>gi|95930881|ref|ZP_01313612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas
acetoxidans DSM 684]
gi|95133123|gb|EAT14791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas
acetoxidans DSM 684]
Length = 664
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 49/154 (31%), Gaps = 4/154 (2%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLS 116
+ +L + ++ LI + L +E E+ ++ + + + + +
Sbjct: 94 QNFTPELEKQLQLTRQSINLLIDQALLLEEAERMHVSISDDELVKAIAEVPAFQVDGVFN 153
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
E + S L Q + F+Q Q + + + + + ++ +++
Sbjct: 154 KEQYISVLSYQRMTPELFEQMQKQQMLVN-LTQAQIRSEAVVTDEDVADEYRRLNENVNL 212
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
Y+ + + + E R+
Sbjct: 213 SYVAFKTGAFTDAVDVTDDALTAYYEANQEAFRV 246
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 22/234 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFVQHARNTG 114
+ I++L Q++ EL + ++ + L Q +S V + + N
Sbjct: 155 EQYISVLSYQRMTPELFEQMQKQ---QMLVNLTQAQIRSEAVVTDEDVADEYRRLNENVN 211
Query: 115 LSAEDFS--SFLDKQGIGDNHF--------KQYLAIQSIWPDVVK---NDFMLKYGNLEM 161
LS F +F D + D+ + + Q + +V D++ + E
Sbjct: 212 LSYVAFKTGAFTDAVDVTDDALTAYYEANQEAFRVAQQVNLSLVTLSPADYLDQVVLEEG 271
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK-DCNKLE 220
+I + + IP + + +K+ AE+ + D KL
Sbjct: 272 DIQRYYDRHLATYAIPEQMAAAHILIPVAQDADDAQREKQRVLAEQVLEKAQTGDFAKLA 331
Query: 221 KFASKIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
K S + G + P F ++ + T+ G I
Sbjct: 332 KQYSADTATAQKGGDLGLFQRGVMDPAFEAAAFALQKDALSPIVETRFGYHIIK 385
>gi|53805225|ref|YP_113052.1| peptidyl-prolyl cis-trans isomerse D [Methylococcus capsulatus str.
Bath]
gi|53758986|gb|AAU93277.1| peptidyl-prolyl cis-trans isomerse D [Methylococcus capsulatus str.
Bath]
Length = 605
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 6/130 (4%)
Query: 155 KYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ E E+ +QK T + +L ++ K +++ +I+ E RL
Sbjct: 218 EVKPTEEELRNFYEEQKAGFTTEERRKVSHILVTVDPAKPEDEAAALAKIRQIRE-RLLK 276
Query: 213 PKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
+D KL K S ++ G + + + P F+ L SQ + P T G
Sbjct: 277 GEDFAKLAKETSDDRVSAEKGGDLGVVTKGGMEPNFEKAALALSQGEVSEPVRTSFGYHL 336
Query: 270 IAICDKRDLG 279
I + +
Sbjct: 337 IKVTELTPAT 346
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 3/82 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQG 128
L++ A++ L+ + L Q G+ + V F + + ++ L QG
Sbjct: 61 LKRQALERLVRDELISQAAAGEGLAVPDSAVRAFIQTLPYFQTDGKFDKDKYNVMLSAQG 120
Query: 129 IGDNHFKQYLAIQSIWPDVVKN 150
F + + + +
Sbjct: 121 TSSPVFVEQVKRALLMEQFQRG 142
>gi|50084586|ref|YP_046096.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase)
[Acinetobacter sp. ADP1]
gi|2623969|emb|CAA05330.1| putative peptidyl-prolyl cis-trans isomerase [Acinetobacter sp.
ADP1]
gi|49530562|emb|CAG68274.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Acinetobacter sp. ADP1]
Length = 622
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 18/154 (11%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
S IK +LI+F +V I Y + + T+NG+ I+ D+
Sbjct: 1 MESFRKVIKGWLGKVLLILFLTPLALVGIEGYFGGGNKADVAKTVNGQDISKKDLENLTK 60
Query: 62 LLK---LQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
K L G+ +E+ A+ LI +L Q+ EK GI+ + Q
Sbjct: 61 TYKDQYLSLAKGDETLLNQSYIEENALNTLIARSLLLQQAEKLGISLSDAQIEKMLAQQP 120
Query: 109 -HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
N S +S++L G+ L
Sbjct: 121 SFQENGKFSETLYSNYLRSVGMTSQALIASLRQD 154
>gi|222153359|ref|YP_002562536.1| foldase protein PrsA 1 [Streptococcus uberis 0140J]
gi|222114172|emb|CAR42691.1| foldase protein PrsA 1 precursor [Streptococcus uberis 0140J]
Length = 314
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 84/241 (34%), Gaps = 29/241 (12%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
++ K++T + L + S S + T+ G+ IT D
Sbjct: 1 MNTSKKIVTGFVTLASVLTLAACSSTS---DNTKVVTMKGDTITVTDFYNEAK------- 50
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ ++ LI+ + ++E G + V + + A+ G S FS L + G
Sbjct: 51 TSTAAQQSMLSLILSRVFEKE---YGKSVPEKKVEESYNKTAKQYGSS---FSDALAQAG 104
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ + +K+ + + ++ +K + N +K E + + F
Sbjct: 105 LTTDTYKKQIRTTML------VEYAVKQAAKKELTDDNYKKAFESYTPEMTTQVIAF--- 155
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
++ +K +++ + + A+K D + A +L SD+ +
Sbjct: 156 ----DDEEKAKKVLEETKAEGADFANIAKENTTEANKKIDYTFDSADTVLPSDVIKETAK 211
Query: 249 L 249
L
Sbjct: 212 L 212
>gi|317475723|ref|ZP_07934982.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|316908106|gb|EFV29801.1| ppic-type ppiase domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 541
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 59/170 (34%), Gaps = 16/170 (9%)
Query: 149 KNDFMLKYGNLEMEIPANKQK-----MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + Y +E A ++ + +R + +P N +
Sbjct: 118 RARLVESYLTDTVEADAAARRWYDRMKARHRGGQVRVRHIFKYLPQNVSSDALRDAVARM 177
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262
D+ LR N + D ++ ++ + +F+++ + + P+
Sbjct: 178 DSIHEYLRKNPGDNAFNACVERFSD--DKRSLWVSWLQMPVEFEDVAFELPVGGVSQPFF 235
Query: 263 TQKGVEYIAICDKRD------LGGEIALKAYLSAQN--TPTKIEKHEAEY 304
T +G+ + + ++R+ + EI + + ++EK + EY
Sbjct: 236 TPQGIHIVKVLERRELPPFEKVKDEIMARQSRHEADRGVEVQVEKLKKEY 285
>gi|86133091|ref|ZP_01051673.1| peptidylprolyl isomerase [Polaribacter sp. MED152]
gi|85819954|gb|EAQ41101.1| peptidylprolyl isomerase [Polaribacter sp. MED152]
Length = 459
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 89/279 (31%), Gaps = 13/279 (4%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ +K + + ++ F +V + + + I ++ D DI K ++++
Sbjct: 5 TTILKFIKSAILVAFFGLVSTYT-SAQIKIDGVAVVIGKNIVLDSDIEKFKQEVEVRSEG 63
Query: 70 GE--LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+ ++EL+ + L +T ++ + +
Sbjct: 64 KIKISDCEMLEELMQQKLLAHHAVIDSVTVSDEEISSRVERSVAFFTEQFGSVDKVIKAY 123
Query: 128 GI-GDNHFKQYLAIQSIWPDVVKNDFM---LKYGNLEMEIPANKQKMK-NITVREYLIRT 182
G + K+ L +++ + + K E+ +K + + E+
Sbjct: 124 GFNDLDDLKKELYSVQSENVLIEKEQLKITDKIDVTPEEVRLYYVGLKEDGELPEFSAEI 183
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK--FASKIHDVS--IGKAQYLL 238
L + + Q+ I E + + N K S V+ G+ +
Sbjct: 184 ELAQLVIKAKPTEEENQRIINKLNELKKEIEDGANFKMKAIINSDDPGVTNNGGRYEVTK 243
Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
ES +F+ + + P+ + G + + + +
Sbjct: 244 ESQFIKEFKEMAFSLDVGQVSKPFKSDFGYHLMQLHEIK 282
>gi|107100164|ref|ZP_01364082.1| hypothetical protein PaerPA_01001186 [Pseudomonas aeruginosa PACS2]
Length = 314
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 10/163 (6%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ E++ K + Y + + + G + R + E R D
Sbjct: 140 SDAELQAAYQANKAQLAVPTLYRVSQIFIA----ASAAGGLAEARKRAQELYRQAADGDF 195
Query: 217 NKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAI 272
+L + S + G LL + L P + L++ + + P G + +
Sbjct: 196 AELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFHLVKL 255
Query: 273 CDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
++RD ++ L + E+ Y+ L +NA
Sbjct: 256 TERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|153956391|ref|YP_001397156.1| foldase-related protein [Clostridium kluyveri DSM 555]
gi|146349249|gb|EDK35785.1| Foldase-related protein [Clostridium kluyveri DSM 555]
Length = 247
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 76/269 (28%), Gaps = 40/269 (14%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M + + +N IT+ D + ++ ++L+ E + + G
Sbjct: 1 MQNNVLAIVNNVEITENDFKNVVKRFPAERQQYFNTDEGKKQLLDEIISFELFYNYGKEI 60
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ E +L + K+ L IQ +++N +
Sbjct: 61 E------------------LEKDRDYL----VKLETTKKELLIQETISKIMEN-IKVTDK 97
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+E NK K R +L + Q ++K + +
Sbjct: 98 EVEDYYTNNKSMYKKPEN--ITARHILVDSFEKAAQISNEIKKGLSFEDA---------- 145
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+K++S G + P+F+ + + P TQ G I + K
Sbjct: 146 -AKKYSSCPSKAQGGNLGNFTRGQMVPEFETAAFQLEIGILSKPVKTQFGYHLIKVEKKE 204
Query: 277 DLGG---EIALKAYLSAQNTPTKIEKHEA 302
+ A + + ++
Sbjct: 205 KDSIKGFDKVKNAIKNGLLQEKRTLEYSK 233
>gi|320450789|ref|YP_004202885.1| peptidyl-prolyl cis-trans isomerase [Thermus scotoductus SA-01]
gi|320150959|gb|ADW22337.1| peptidyl-prolyl cis-trans isomerase [Thermus scotoductus SA-01]
Length = 307
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 69/255 (27%), Gaps = 37/255 (14%)
Query: 37 AMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVE----------- 83
A + + E IT R L + G + + L+ +
Sbjct: 20 AQEDPVVAQVGPEHITKSQFELRFGLFAKSALRQLGLPDSEETRALLAQYRAPYLEALAE 79
Query: 84 -TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGI-GDNHFKQYLA 139
+ G ++V Q A E+ L+ G+ ++ LA
Sbjct: 80 ERALLLLARRQGFWPLPDSVE---AQVAELVKAFPEEEALRKALEGAGVPDLATYRTLLA 136
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + + + + A + Y R +L +P + +
Sbjct: 137 EAMALEAL-EAHYRTELKVSPAALKALWLLSPEYRHPALYCARHIL--VPTLEAAKEVLA 193
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQN 255
+ +A ++ + S+ + G E P F+ LL
Sbjct: 194 RLAKGEA----------FAQVAREVSQDPGSKEAGGDLGCEPEGTYIPAFEKALLALKPG 243
Query: 256 NTTNPYVTQKGVEYI 270
+ P T+ G I
Sbjct: 244 EVSPPVGTEFGFHVI 258
>gi|53723660|ref|YP_103105.1| peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei ATCC
23344]
gi|67642012|ref|ZP_00440775.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia mallei GB8
horse 4]
gi|254177616|ref|ZP_04884271.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
ATCC 10399]
gi|254200054|ref|ZP_04906420.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
FMH]
gi|254206388|ref|ZP_04912740.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
JHU]
gi|52427083|gb|AAU47676.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia mallei
ATCC 23344]
gi|147749650|gb|EDK56724.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
FMH]
gi|147753831|gb|EDK60896.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
JHU]
gi|160698655|gb|EDP88625.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia mallei
ATCC 10399]
gi|238523056|gb|EEP86497.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia mallei GB8
horse 4]
Length = 644
Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 28/190 (14%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D + R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGTLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ ++ V +
Sbjct: 69 VLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLSTSDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITV 175
+Q+ V
Sbjct: 189 EQQREVQPMV 198
>gi|299822144|ref|ZP_07054030.1| peptidyl-prolyl cis-trans isomerase [Listeria grayi DSM 20601]
gi|299815673|gb|EFI82911.1| peptidyl-prolyl cis-trans isomerase [Listeria grayi DSM 20601]
Length = 287
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 59/213 (27%), Gaps = 35/213 (16%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
V+ + G + F+S L + + + +K L + + K +
Sbjct: 67 KVSDKEVDKKYNAAKAQYG---DQFASALQQANLTEKMYKLSLKNELLRQKATKAYIKVT 123
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
Q + + +L + + + ++ K A+ + D
Sbjct: 124 --------DKKLQDYYKTWQPKITVSHILVADKKTADKVEQELKDGKKFAD-LAKKYSTD 174
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAIC 273
K GK + P F+ K + + + P +Q G I +
Sbjct: 175 TASKTK---------GGKLDAFGTGQMDPAFEKAAYALKEKGDISKPVKSQFGYHVIQL- 224
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ K ++ + +Y+
Sbjct: 225 -------DEPAKKATFEKDKAQ----VKKDYID 246
>gi|167586935|ref|ZP_02379323.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ubonensis Bu]
Length = 644
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDESANVAAVNGHKITRVEFDGTYRQQIDRARQALGAQFDLKSFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKEVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|296329574|ref|ZP_06872060.1| hypothetical protein BSU6633_00635 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305672771|ref|YP_003864442.1| putative secretion protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296153317|gb|EFG94180.1| hypothetical protein BSU6633_00635 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411014|gb|ADM36132.1| putative secretion protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 297
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 45/318 (14%), Positives = 109/318 (34%), Gaps = 40/318 (12%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSS---RIRTTINGEVITDGDISKRIALLKLQ 66
S I + +L+ V KS A +S TI G+ +T + L+
Sbjct: 3 SRTIWTIILGALLVCCISVAYTLTKSQAGASPSGESIATIGGKSVTREE--------WLK 54
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ K ++++I + +Q +K+ + +N ++ F+ SF +
Sbjct: 55 EMEDRYGKSTLEDMINVRVVEQLAKKNNLKVSNNEIDREFLLVKAVNN-------SFYED 107
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + +K + + +++ D + N E++ NK K Y IR ++
Sbjct: 108 EHTTEKEWKDQIRYNILLEELLTRD--IDISNKELKSFYNKNKELYQFDDSYRIRHIVVK 165
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHP 244
++ ++ +K+ + + E+ + G ++ E+ +
Sbjct: 166 -------DEEEAREVLKE---LKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNIPS 215
Query: 245 QF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEK 299
+ + ++ ++ P G I + +K R + +K
Sbjct: 216 AYIEEAQTLKEDEWSDEPIKVSNGYAVIQLKEKLKARTFSYDEVKDQIRRQIAMDQLGDK 275
Query: 300 HEAEYVKKLRSNAIIHYY 317
VK L A + ++
Sbjct: 276 AT---VKTLWKEADVSWF 290
>gi|126658177|ref|ZP_01729328.1| hypothetical protein CY0110_11602 [Cyanothece sp. CCY0110]
gi|126620548|gb|EAZ91266.1| hypothetical protein CY0110_11602 [Cyanothece sp. CCY0110]
Length = 257
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 89/249 (35%), Gaps = 25/249 (10%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
T D+ + I LK E+ + +Q+ I+E Q ++ +T + R
Sbjct: 6 TLIDVEEVIDYLKKNLKFKEICQQILQQRIIE----QASQQRDLTITEEEIQAEADNIRR 61
Query: 112 NTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
L A D ++L+ + I + ++ + + + +N F + + N
Sbjct: 62 EKRLEKAVDTLAWLNGELITPDDWEAGIQDTLLRKKLAQNLFDKEVEKTFQQSWFNFD-- 119
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+ L+ ++ +P KL + F Q ++ + D ++ +
Sbjct: 120 ------QVLLYQII--VPYEKLALEIFYQIEEEEMSFYQAAHLYDIDEKRRLQCGYEGKV 171
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
+ ++ +L P + + P+ T++G I + +R + ++ + Y
Sbjct: 172 YR---FNMKPELSPV---IFAANPGEVIPPFKTEQGYHIIMV--ERFIKAQLTEEIY--E 221
Query: 291 QNTPTKIEK 299
Q ++
Sbjct: 222 QIINKMFDQ 230
>gi|192360723|ref|YP_001982468.1| putative peptidyl-prolyl cis-trans isomerase D [Cellvibrio
japonicus Ueda107]
gi|190686888|gb|ACE84566.1| putative peptidyl-prolyl cis-trans isomerase D [Cellvibrio
japonicus Ueda107]
Length = 621
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 50/399 (12%), Positives = 105/399 (26%), Gaps = 87/399 (21%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + + I + F+++IF + + S +W ++ +NGE IT ++ I
Sbjct: 1 MLQSIRDNSKGVISYILIGFLVVIFALFGVESLFNWNPTANKVVEVNGEKITQVELQNAI 60
Query: 61 A--LLKLQKINGE-----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
A ++ G+ L K + LI + Q +K+G+T ++ +
Sbjct: 61 ARQKQQMMNRYGDQVPSEFLSEDYLRKPVLDNLIQNQVLYQAAKKAGMTVGNDLITEQIS 120
Query: 108 Q---HARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN------------- 150
G+ + L G + Q LA + +
Sbjct: 121 SAPVFKNEAGVFDNTRYRQALSMMGYTHATYTQQLAKDLVLNQLYTGLASSSFTTPNEIE 180
Query: 151 --------------------DFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSI- 187
+ EI K + + + + S+
Sbjct: 181 QLIALSYQTRDFSYFVLPSSKIKESVVVSDEEIADYYAKNPQAYTSEEQVAVDYIELSVD 240
Query: 188 --------------------------PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ V+ + + ++ +
Sbjct: 241 ALMADISISEEQLHKQYEQGLASFVAAPERHAAHILVENQDAEKIKAVREKLAAGEDFAE 300
Query: 222 FASKIHD-----VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDK 275
A D G + +F+ L + P T G +I + +
Sbjct: 301 LAKTYSDDLGSKEQGGDLGFTKGDTFPAEFETALAGLKVGEVSAPVETDAGTHFIKLLAE 360
Query: 276 RDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
R KA L + E +++L+ A
Sbjct: 361 RGSQAPSFEEQKASLEEHLKRAEAENIFVAKLEQLKELA 399
>gi|134282592|ref|ZP_01769296.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
305]
gi|134246149|gb|EBA46239.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
305]
Length = 240
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 87 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 130
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 131 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 190
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 191 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 233
>gi|253999166|ref|YP_003051229.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
SIP3-4]
gi|253985845|gb|ACT50702.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
SIP3-4]
Length = 632
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 80/254 (31%), Gaps = 18/254 (7%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+ + + R LL Q G + E I + E ++ +T +
Sbjct: 146 SQFESTMRTDLLVQQAREGLAALAYLPEPISKQTLATEHQQREVTI--AEIKT--ADFLD 201
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFK--QYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NK 167
+ ++ D+ + FK + + ++ + N+ + K + E+ ++
Sbjct: 202 QVKVDEAQIKAYYDQH---KDKFKVPEQVKLEFV--LFSSNNLIPKVQVSDEEVKKYYDE 256
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASKI 226
K + +L S + K+ + +++R P L K SK
Sbjct: 257 NAAKFQGNEQRRASHILISFGVSATTEAKQQAKKQAEEVLAQVRQHPDQFADLAKKYSKD 316
Query: 227 HDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR-DLGGEI 282
+ G + F++ + +N ++ G I + + G
Sbjct: 317 PGSAEKGGDLGSFGRGMMVKPFEDAVFSMKPGEISNLVESEFGYHIIKLTEITGQSQGFD 376
Query: 283 ALKAYLSAQNTPTK 296
A K + A+ K
Sbjct: 377 AAKPQIKAELLYQK 390
>gi|37993071|gb|AAP97044.1| putative peptidylprolyl isomerase [Lactobacillus reuteri DSM 20016]
Length = 128
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 13/128 (10%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + A ++ T +G IT+ + + K +Q++I
Sbjct: 6 LIAIIAGVALMMPLAACGNKAVATTSGGKITESEYYSSMK-------QTSAGKQVLQQMI 58
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
++ + + ++ G VN + + G DF+++L Q + + KQ +
Sbjct: 59 LDKVLE---KQYGKEVSDKQVNAQYNTYKNEYG---SDFNAYLQSQNLTEKSLKQQIRSN 112
Query: 142 SIWPDVVK 149
+ +
Sbjct: 113 LLLTAAAR 120
>gi|22124938|ref|NP_668361.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis
KIM 10]
gi|45440627|ref|NP_992166.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Microtus str. 91001]
gi|108808639|ref|YP_652555.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis
Antiqua]
gi|108811102|ref|YP_646869.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis
Nepal516]
gi|145600047|ref|YP_001164123.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis
Pestoides F]
gi|149365001|ref|ZP_01887036.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis CA88-4125]
gi|162420506|ref|YP_001607415.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Angola]
gi|165926634|ref|ZP_02222466.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936039|ref|ZP_02224609.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010989|ref|ZP_02231887.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212996|ref|ZP_02239031.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399316|ref|ZP_02304840.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421506|ref|ZP_02313259.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423714|ref|ZP_02315467.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468476|ref|ZP_02333180.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis FV-1]
gi|218930183|ref|YP_002348058.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia pestis
CO92]
gi|229838757|ref|ZP_04458916.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229896089|ref|ZP_04511259.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Pestoides A]
gi|229899325|ref|ZP_04514468.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901331|ref|ZP_04516453.1| Peptidyl-prolyl cis-trans isomerase ppiD [Yersinia pestis Nepal516]
gi|270489517|ref|ZP_06206591.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27]
gi|294504885|ref|YP_003568947.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Z176003]
gi|21957777|gb|AAM84612.1|AE013706_7 putative protease maturation protein [Yersinia pestis KIM 10]
gi|45435484|gb|AAS61043.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar
Microtus str. 91001]
gi|108774750|gb|ABG17269.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Nepal516]
gi|108780552|gb|ABG14610.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Antiqua]
gi|115348794|emb|CAL21748.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis CO92]
gi|145211743|gb|ABP41150.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Pestoides F]
gi|149291414|gb|EDM41488.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis CA88-4125]
gi|162353321|gb|ABX87269.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis Angola]
gi|165916184|gb|EDR34791.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921562|gb|EDR38759.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989989|gb|EDR42290.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205783|gb|EDR50263.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960425|gb|EDR56446.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051820|gb|EDR63228.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167057884|gb|EDR67630.1| peptidyl-prolyl cis-trans isomerase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229681260|gb|EEO77354.1| Peptidyl-prolyl cis-trans isomerase ppiD [Yersinia pestis Nepal516]
gi|229687727|gb|EEO79800.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695123|gb|EEO85170.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701012|gb|EEO89041.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Pestoides A]
gi|262362950|gb|ACY59671.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis D106004]
gi|262366870|gb|ACY63427.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis D182038]
gi|270338021|gb|EFA48798.1| PPIC-type PPIASE domain protein [Yersinia pestis KIM D27]
gi|294355344|gb|ADE65685.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis Z176003]
gi|320016339|gb|ADV99910.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 628
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 30/192 (15%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQ 66
L + L+ F+L I +A +N + I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDYA------AKVNDQDISRAQLEQAMQSERGRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +LI L Q K G+T V Q
Sbjct: 68 QKLGEQFSVLAANEGYMQQLRQQVLGQLINNVLLDQYARKLGLTVSDEQVKESIRQIPDF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
+ + +++ G F Q ++ + + + +P Q
Sbjct: 128 QTGEHFDNNRYLALINQLGYTPEQF-----AQLQRQQLINQQLLKAFSDTGFVLPIEVQA 182
Query: 170 MKNITVREYLIR 181
M + +++ +R
Sbjct: 183 MSALVLQQRDVR 194
>gi|262195599|ref|YP_003266808.1| hypothetical protein Hoch_2377 [Haliangium ochraceum DSM 14365]
gi|262078946|gb|ACY14915.1| hypothetical protein Hoch_2377 [Haliangium ochraceum DSM 14365]
Length = 339
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 28/278 (10%), Positives = 78/278 (28%), Gaps = 40/278 (14%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+ T++G + + + L L + A+ + + L +E E+ G++
Sbjct: 67 VVATVDGAPVYGDCVRTQAQALGLDRAG------ALAQCVDFELLAREAERRGLSARP-E 119
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V + ++++ + + LE+
Sbjct: 120 VQAAGER-----------------------ERVRRFIEDEFE-RRYPDPASAPRAELLEV 155
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-RLRLPKDCNKLE 220
Q ++ +R + + + + + + R R + +LE
Sbjct: 156 YEALKGQYVRPALRHTAFLRVPVAEDSEAGGDEDRQAKALVDEIYAAVRERDDLETAELE 215
Query: 221 KFASKIHDVSIGKAQYLLESD-----LHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICD 274
+ +I + + + + L + P TQ G + I + +
Sbjct: 216 RVGKEIAGEREVEVLRAPLAYPGARLVPEYLEPALSLTEPGTVAPPARTQWGWDIILLTE 275
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + + ++++ LR A
Sbjct: 276 LEPALDRSPDEVI--DELFQLWQRRAFQQWLRALREPA 311
>gi|206560356|ref|YP_002231120.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia J2315]
gi|198036397|emb|CAR52293.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia J2315]
Length = 644
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|166030348|ref|ZP_02233177.1| hypothetical protein DORFOR_00009 [Dorea formicigenerans ATCC
27755]
gi|166029868|gb|EDR48625.1| hypothetical protein DORFOR_00009 [Dorea formicigenerans ATCC
27755]
Length = 260
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 87/283 (30%), Gaps = 50/283 (17%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93
M ++ + G ITD ++ I L ++ N + ++L E L
Sbjct: 15 MDQKVLAVVGGHEITDKEVDAFIKSLPREQQAYASNPQFRAQCQEQL--EAL-------- 64
Query: 94 GITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
Y F ++ + L E++ S ++ ++ + + + +
Sbjct: 65 ----------YSFAKYGEDLKLDETEEYKSVMENA-------RKDILARLAMKQLFDSVK 107
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + Q K TV + +L ++ + ++
Sbjct: 108 VTDEEVKDYYEANKSQFKKGATV---HAKHIL-------TDSEEKCNQILESIVSGEKVF 157
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
+ ++F++ G + + +F++ + P TQ G I
Sbjct: 158 E---DAAKEFSTCPSGQRGGDLGEFGKGQMVKEFEDAAFAAEIGHVVGPVKTQFGYHLIK 214
Query: 272 ICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ +K+D + + S + + + + V +L
Sbjct: 215 VEEKKDAAESSFDEVKEQIKSQLKQQKQGDAYSKK-VAELTEK 256
>gi|90021693|ref|YP_527520.1| tRNA pseudouridine synthase [Saccharophagus degradans 2-40]
gi|89951293|gb|ABD81308.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus
degradans 2-40]
Length = 264
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 25/200 (12%)
Query: 121 SSFLDKQ--GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
S LDK + FK+ + I + +K + + ++ + K I
Sbjct: 73 SDLLDKSLIDVEVAEFKKQMLISRYFEAYIKKNVTPEAIKNYYNNNQDEYQNKKI----- 127
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGK 233
+ +LF N + R+ A+E+ RL ++ K E A + D G
Sbjct: 128 HVAHILFRT--NGRMSDEEKNARLLKAKEAHARLQQN-EKFEDLAKEYSDDKLSAQKGGD 184
Query: 234 AQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI-----CDKRD---LGGEIAL 284
+L E + P F + + + P+VT G + + + + G+IA
Sbjct: 185 LGWLDEGSIDPVFSRTVFAMDAGAVSEPFVTSYGYHIVKVIEAAKTTTKPFDAVKGDIAY 244
Query: 285 KAYLSAQNTP-TKIEKHEAE 303
K A+ ++++ +
Sbjct: 245 KLKEQAKQAEMNRLKEQAKK 264
>gi|319649925|ref|ZP_08004075.1| hypothetical protein HMPREF1013_00680 [Bacillus sp. 2_A_57_CT2]
gi|317398363|gb|EFV79051.1| hypothetical protein HMPREF1013_00680 [Bacillus sp. 2_A_57_CT2]
Length = 254
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 47/138 (34%), Gaps = 13/138 (9%)
Query: 39 SSRIRTTINGEVITDGDIS----------KRIALLKLQKINGE-LEKIAVQELIVETLKK 87
+ +N + I + + +++ K + +++ + L+ +TL
Sbjct: 63 EEKTVAIVNDQEILGREYNSVLTSSQMMYQQMGQDPTTKDAADKIKEQTLDSLVGQTLLL 122
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
QE +K G V + ++F + + + G+ + ++ +A +
Sbjct: 123 QEADKKGYKASDEEVKKQLEETKGQFK-DDKEFETAMKQAGLNPDSLEKEIANNIKYTKY 181
Query: 148 VKNDFMLKYGNLEMEIPA 165
+ + + EI
Sbjct: 182 INGEIKPGE-VTDAEIQK 198
>gi|51595313|ref|YP_069504.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia
pseudotuberculosis IP 32953]
gi|153948580|ref|YP_001402048.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia
pseudotuberculosis IP 31758]
gi|170025447|ref|YP_001721952.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pseudotuberculosis
YPIII]
gi|186894330|ref|YP_001871442.1| peptidyl-prolyl cis-trans isomerase D [Yersinia pseudotuberculosis
PB1/+]
gi|51588595|emb|CAH20203.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of
outer membrane proteins [Yersinia pseudotuberculosis IP
32953]
gi|152960075|gb|ABS47536.1| peptidyl-prolyl cis-trans isomerase [Yersinia pseudotuberculosis IP
31758]
gi|169751981|gb|ACA69499.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia
pseudotuberculosis YPIII]
gi|186697356|gb|ACC87985.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Yersinia
pseudotuberculosis PB1/+]
Length = 628
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 30/192 (15%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQ 66
L + L+ F+L I +A +N + I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDYA------AKVNDQDISRAQLEQAMQSERGRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +LI L Q K G+T V Q
Sbjct: 68 QKLGEQFSVLAANEGYMQQLRQQVLGQLINNVLLDQYARKLGLTVSDEQVKESIRQIPDF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
+ + +++ G F Q ++ + + + +P Q
Sbjct: 128 QTGEHFDNNRYLALINQLGYTPEQF-----AQLQRQQLINQQLLKAFSDTGFVLPIEVQA 182
Query: 170 MKNITVREYLIR 181
M + +++ +R
Sbjct: 183 MSALVLQQRDVR 194
>gi|260891097|ref|ZP_05902360.1| putative chaperone SurA [Leptotrichia hofstadii F0254]
gi|260859124|gb|EEX73624.1| putative chaperone SurA [Leptotrichia hofstadii F0254]
Length = 608
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 25/155 (16%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKI------------------------A 76
+ T+NG I D + LK Q +KI
Sbjct: 46 EVIATVNGAKIYRDDFDRESYGLKAQLSEINQQKIQQLSQVGVSAENIKNIPDNIINEYV 105
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q +I + + GI +N F + + + ++ ++F+ L +G FK+
Sbjct: 106 LQLMINKEVLLSSAHNLGIKVSGAEINKEFNNYQKQSQMNRKEFADHLRNRGYNITSFKK 165
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
+ + I ++ + EI ++ K
Sbjct: 166 AIKDEKIIEK-MREKIFSNDKVTDEEIKKAYERNK 199
Score = 39.6 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 10/160 (6%)
Query: 164 PANKQKMKNITVREYLIRTVL--FSIPDNKLQNQGFVQKRIKDAEESRLRLPKD--CNKL 219
A Q N Y I + + I + G + K A++ KD K
Sbjct: 350 EAALQAKFNAKKDSYNIPNSIGGYVIGEEYQAGDGDFEAAKKQAQDIMKTTNKDNFAAKA 409
Query: 220 EKFASKIHDVS-IGKAQ-YLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
++F+ + G S L P+F N +K + + P TQ G I I K
Sbjct: 410 KEFSKDPGSANNGGSLGETADLSQLVPEFANAVKSGKAGDIVGPIKTQFGYHIIYIQSKD 469
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS-NAIIH 315
+A +++ TPT E + + +KK++ A I
Sbjct: 470 ANNENVAKVSHIL--ITPTISEASKQKIIKKVQDLKAEIE 507
>gi|297544426|ref|YP_003676728.1| hypothetical protein Tmath_0987 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842201|gb|ADH60717.1| conserved hypothetical protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 238
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKINGE-LEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG I + R L + + ++ +Q+LI E +++ K I N
Sbjct: 66 IIAEVNGIPIYKNEFELRKGLALASGVQADNIDDYILQKLIREKVQEYLASKYNIKVSQN 125
Query: 101 TVNYFFVQHARNTGLSAED---FSSFLDKQGIGD----NHFKQY 137
+N + + + E + + G+ + N +++Y
Sbjct: 126 EINAYIEKEKKEFNEYPEAKKKLNELIAASGMTEVEYWNTYEKY 169
>gi|116074357|ref|ZP_01471619.1| hypothetical protein RS9916_37942 [Synechococcus sp. RS9916]
gi|116069662|gb|EAU75414.1| hypothetical protein RS9916_37942 [Synechococcus sp. RS9916]
Length = 251
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 69/234 (29%), Gaps = 22/234 (9%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA-RNTGLSAEDFSSFLDKQGIGDNHFK 135
++ LI E + EI +S + T + S E + G+ ++ F
Sbjct: 27 LESLI-ERMVVSEITRS-VELPEATEQTVINDFLRQQNAGSPEALGELIRNSGLSEDAFY 84
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ L + + + F K E QK + L R V + N
Sbjct: 85 EQLFRPARMAQIAQEQFGAKA-----EARFLGQKGR-------LDRVVYSLLRLNSQSQA 132
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQ 254
+ RI E + +++ + + G + + HP L+
Sbjct: 133 QELYLRIAHGEA------NFSDLAGRYSEGMERNTNGVIGPVPLNQAHPTLSEKLRAAKP 186
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
P+ + + + + A + + +++ V+ L
Sbjct: 187 GMLLEPFRIDRWWVVARLERFAPASFDERMGAQMRMELLQEWLKEDTRRRVQAL 240
>gi|330836698|ref|YP_004411339.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
coccoides DSM 17374]
gi|329748601|gb|AEC01957.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
coccoides DSM 17374]
Length = 92
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL 249
K + +K + D ++++ D + L + S G + + +F+
Sbjct: 4 KASHILVKEKALADRLYAQIKGGADFSSLARTHSTCPSKSKGGDLGWFGPGKMVGEFERA 63
Query: 250 LKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
++K S + P TQ G I RD
Sbjct: 64 VQKLSHGAVSAPIRTQFGYHIIKKTGLRD 92
>gi|116495203|ref|YP_806937.1| parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei ATCC
334]
gi|191638713|ref|YP_001987879.1| Protein maturation protease (Peptidylprolyl isomerase)
[Lactobacillus casei BL23]
gi|227534778|ref|ZP_03964827.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239632085|ref|ZP_04675116.1| protein maturation protease [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|116105353|gb|ABJ70495.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei ATCC
334]
gi|190713015|emb|CAQ67021.1| Protein maturation protease (Peptidylprolyl isomerase)
[Lactobacillus casei BL23]
gi|227187534|gb|EEI67601.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239526550|gb|EEQ65551.1| protein maturation protease [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|327382753|gb|AEA54229.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei LC2W]
gi|327385940|gb|AEA57414.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei BD-II]
Length = 300
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 82/279 (29%), Gaps = 23/279 (8%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ + V+ SS + G +T + + + ++ +I
Sbjct: 5 ILGVVGLFVAVTLAGCSSSTVANMKGAKVTKDEYYDAMK-------KTTTGQATLRNMI- 56
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
LK E ++ VN F + G S F + L++ G ++ FK +
Sbjct: 57 -VLKALE-QQYPNKVSDKKVNSQFNTLKKQYGSS---FDTTLEQNGYTESSFKDQIRTTL 111
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ E +I A +K + + ++ +L D Q QK
Sbjct: 112 ----YSEVALKALKKPTEKQIAAQWKKYQ----PKITVQHILVKTEDEAKQIISDYQKDP 163
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
+ L + K + L+S L K+ + TT P
Sbjct: 164 TEKNFEALAKKNSIDTGTK-DKGGKLTAFDNTDTSLDSTFKKAAFK-LTKAGDITTTPVK 221
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
TQ G I + G K L Q T
Sbjct: 222 TQYGYHVIRVISVGKKGTMKEHKKDLENQLYTTWQSDQT 260
>gi|94310820|ref|YP_584030.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cupriavidus
metallidurans CH34]
gi|93354672|gb|ABF08761.1| Peptidyl-prolyl cis-trans isomerase [Cupriavidus metallidurans
CH34]
Length = 647
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 43/143 (30%), Gaps = 20/143 (13%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKINGELE------ 73
F + SY + SS ++G IT ++ + + ++ N +
Sbjct: 24 FVFFGVESYSRFMDSSHDAAKVDGRAITVQEVDNVVRDQSERMRQMLGNNYDPRMFEGPA 83
Query: 74 --KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-------FSSFL 124
+ + +LI + + + +K +T + L D + L
Sbjct: 84 ARQAVLDQLIQQRVISEATQKKHLTVSDAQIAAAIQSIPAIAQLRTADGKFDEKAYVQLL 143
Query: 125 DKQGIGDNHFKQYLAIQSIWPDV 147
QG+ + + +
Sbjct: 144 AAQGMTPEQLDARMRFELSTQQL 166
Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 80/267 (29%), Gaps = 28/267 (10%)
Query: 52 TDGDISKRIAL-LKLQKINGELEKIA------VQELIVETLKKQEIEKSGITFDSNTVNY 104
T + R+ L Q++ G + A + LI ++++++ I
Sbjct: 149 TPEQLDARMRFELSTQQLGGAIGTTAFVPKSLLDRLIAIRDQQRDVQAIVIKP------- 201
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ--SIWPDVVKNDFMLKYGNLEME 162
A ++ + + + ++ + D + + L+
Sbjct: 202 --ADFTAKVTPDAAALKAYYESH-LAAYTMPEQAKVEYLVLSGDALAASQTITPDQLKSY 258
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EESRLRLPKDCNKLE 220
+N Q+ T + +L + P + + K + E+ R P +
Sbjct: 259 YDSNIQRFH--TDEQRRASHILIAAPKDGKEADRKAAKEKAEKLLEDLRKH-PDTFADVA 315
Query: 221 KFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
K S+ + G ++ L F++ + ++ T G I + +
Sbjct: 316 KKNSQDPGSAEKGGDLGFMGRGALVKPFEDAMFALKDGQISDVVETDYGYHIIKLTGIKP 375
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEY 304
E L+A K + Y
Sbjct: 376 AATE-PLEAVRPELEIELKKQLAAKAY 401
>gi|259501419|ref|ZP_05744321.1| peptidylprolyl isomerase PrsA1 [Lactobacillus iners DSM 13335]
gi|302190860|ref|ZP_07267114.1| peptidylprolyl isomerase [Lactobacillus iners AB-1]
gi|309805385|ref|ZP_07699434.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 09V1-c]
gi|312875036|ref|ZP_07735054.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
2053A-b]
gi|315653171|ref|ZP_07906096.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus iners ATCC
55195]
gi|325911618|ref|ZP_08174026.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII
143-D]
gi|259167168|gb|EEW51663.1| peptidylprolyl isomerase PrsA1 [Lactobacillus iners DSM 13335]
gi|308165312|gb|EFO67546.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 09V1-c]
gi|311089431|gb|EFQ47857.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
2053A-b]
gi|315489536|gb|EFU79173.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus iners ATCC
55195]
gi|325476604|gb|EGC79762.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII
143-D]
Length = 297
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 90/307 (29%), Gaps = 37/307 (12%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F K L T ++ F V + + S+ G IT D K +
Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQED------FYNKVKKSPA 52
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ I +I +TL++Q G VN + + G F L + G+
Sbjct: 53 GQAILANMIINKTLQQQ----YGSQVSKKKVNTAYDNARKQYG---ARFEMVLQQNGMTP 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+K+ + + +++ A ++K + ++ +L
Sbjct: 106 EAYKESIQTNLL--------LQAALKDIKPITKAQEKKAWKEYQPKVRVQHILV------ 151
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
+ K++ + K + + ++ L F+
Sbjct: 152 --EKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKEAAF 209
Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKK 307
K T P TQ G I + G + K+ + A+ + + +
Sbjct: 210 KLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIIARIYQKMAQDQNVIKSVLGV 269
Query: 308 LRSNAII 314
+ A +
Sbjct: 270 VLKRANV 276
>gi|171463490|ref|YP_001797603.1| hypothetical protein Pnec_0772 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193028|gb|ACB43989.1| hypothetical protein Pnec_0772 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 137
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 26/132 (19%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRI------------RTTINGEVITDGDISKRIALLKLQK 67
F+ + + + + S++ T+NG IT G ++ + L Q
Sbjct: 7 FIFALCVLAGLAHLSVASAQSKVDSKTDPKSDYEFVATVNGSPITQGLLNLNVRALTNQG 66
Query: 68 ING--ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
EL + ++LI + L QE K G ++ F L
Sbjct: 67 QKDTPELRQAIKEDLINKELIAQEATKLGYA---KEID--FPD-------QITQLKQNLL 114
Query: 126 KQGIGDNHFKQY 137
Q + HFK+
Sbjct: 115 LQAFLEEHFKKR 126
>gi|317128538|ref|YP_004094820.1| hypothetical protein Bcell_1827 [Bacillus cellulosilyticus DSM
2522]
gi|315473486|gb|ADU30089.1| hypothetical protein Bcell_1827 [Bacillus cellulosilyticus DSM
2522]
Length = 179
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 52/151 (34%), Gaps = 8/151 (5%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL 63
K F + + +++I + + T+NGE I D+ K +
Sbjct: 3 KYFKFNNSIFIISIAVLLILILAPFNKGKMEEQVEIDAVVATVNGENIIYKDVIKVKNSM 62
Query: 64 KLQKING-------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+L+K N +L + A+++ I+ L QE ++ I V Q + S
Sbjct: 63 RLKKYNDLTNNNEDKLTEAAIEQRIIHRLLIQEAQRLNIEVSDEEVAIQL-QLIKEVLPS 121
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
L Q ++ + Q + +
Sbjct: 122 DLTLEESLILQNYTEDALLAEIKEQLMIERL 152
>gi|296135612|ref|YP_003642854.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia
K12]
gi|295795734|gb|ADG30524.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomonas intermedia
K12]
Length = 640
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 6/137 (4%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PKDCNKLEKFASKIHDVS--IGK 233
E +L ++P + Q K +A +++ P + L + S+ + G
Sbjct: 271 ERRASHILIAVPADATAAQQEQAKARAEAIAKQVKANPAEFAALARKDSQDPGSAEKGGD 330
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
Y + F + + + P TQ G I + + G + A ++
Sbjct: 331 LGYFTADSMVKPFADAVFGMQKIGEIVGPIKTQFGYHIIELTGIKP-GAQQPFDAVKASI 389
Query: 292 NTPTKIEKHEAEYVKKL 308
+ E + + +
Sbjct: 390 EKQLQQEAAQKQMSADV 406
>gi|218248033|ref|YP_002373404.1| hypothetical protein PCC8801_3275 [Cyanothece sp. PCC 8801]
gi|257060643|ref|YP_003138531.1| hypothetical protein Cyan8802_2846 [Cyanothece sp. PCC 8802]
gi|218168511|gb|ACK67248.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
gi|256590809|gb|ACV01696.1| hypothetical protein Cyan8802_2846 [Cyanothece sp. PCC 8802]
Length = 256
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 74/231 (32%), Gaps = 29/231 (12%)
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQ 136
Q+L+ E + + + +T + + L A D ++L++Q I +++
Sbjct: 29 QQLLEERIINKVSQARNLTVTETEIQTEADKQRCQMKLEKAADTLAWLEEQMITPENWED 88
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ +++ + ++ + K+ V Y I IP KL +
Sbjct: 89 GIR-----DRLLRAKLAESLFSQNVDKFFAQNKLNFDQVVLYQI-----IIPYEKLAWEI 138
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256
F Q ++ + D ++ K + + +L +
Sbjct: 139 FYQIEEEEMSFYQAAHLYDIDEKRKLHCGYEGKLYR---WEIHPNLA---AAIFAAQPGE 192
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+P K + + + ++SA+ TP ++ + +
Sbjct: 193 IISPIKIDKQYHILLV------------EKFISAELTPEIYQEILNKMFDE 231
>gi|307266612|ref|ZP_07548142.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918343|gb|EFN48587.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 240
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Query: 42 IRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG I + R L L + ++ + +L+ E +K+ K +
Sbjct: 65 IIAEVNGIPIYKNEFELRKGLTLASEGQVNDINNFVLSKLVREKVKEYLAMKYNLKVSEG 124
Query: 101 TVNYFFVQHARNTGLSAE---DFSSFLDKQGIGDNHF 134
+N + + + S E + G+ + +
Sbjct: 125 EINSYLEKEKQQFKESPEVDKKLKELISASGMTYDEY 161
>gi|262277387|ref|ZP_06055180.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
gi|262224490|gb|EEY74949.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
Length = 187
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 22/136 (16%)
Query: 44 TTINGEVITDGDISKRIALL-KLQKINGELEKIA--VQELIVETLKKQEIEKSGITFDSN 100
IN IT+ D+ K I +L K++ I + + +LI +K+ E++ + I D
Sbjct: 31 ARINNHSITNYDLFKEIEILEKIKNIKIHPNQKVLILNKLIDLKIKELEVKNNNINTDDI 90
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS----IWPDVVKNDFMLKY 156
++ + L K+Y+ + W ++ F K
Sbjct: 91 ELDKKLNE---------------LSYYKNSPEEIKKYIKKEYQINFQWNKLINFKFRNKL 135
Query: 157 GNLEMEIPANKQKMKN 172
E+ K
Sbjct: 136 EINMDEVNMIINSKKK 151
>gi|253990887|ref|YP_003042243.1| peptidyl-prolyl cis-trans isomerase [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782337|emb|CAQ85501.1| Peptidyl-prolyl isomerase [Photorhabdus asymbiotica]
Length = 623
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 48/150 (32%), Gaps = 19/150 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE------ 71
++I+ ++ V + + +NG+ I+ + + + LQ+ G+
Sbjct: 19 ALIILSFVLTGVGGYLTSGTDSYAAEVNGQTISRAQLEQAFQQERNMLQEQLGDKFSVLA 78
Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDF 120
+ ++ LI L Q ++ G++ V N +
Sbjct: 79 SNEQSMKQIRSQVLERLINNALIDQYSQELGLSASDEQVKDAIRNISYFQINGKFDNNKY 138
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
FL++ + + + I ++
Sbjct: 139 LDFLNRSNLSPDILAEQTRQNLINQQLIMA 168
>gi|269925897|ref|YP_003322520.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum
terrenum ATCC BAA-798]
gi|269789557|gb|ACZ41698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermobaculum
terrenum ATCC BAA-798]
Length = 398
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 69/263 (26%), Gaps = 70/263 (26%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA----------- 117
+++ + ++I + Q K GI V + G SA
Sbjct: 125 TSDVDAYTLDQMINNLVLNQTASKLGINISDQEVQAKIREIMSVVGASATPTSLPTTTTP 184
Query: 118 -------------------------EDFSSFLDK-QGIGDNHFKQYLAIQSIWPDVVKND 151
++F S L K GI + + A + P +++
Sbjct: 185 SATSTPQAKSTPRITPTAATLPSDYQNFVSSLQKSAGISMDMY----ASMLVRPALIRQR 240
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
++ E + +R +L S + +++ K ++ +
Sbjct: 241 YLETKVPKSAE--------------QVHVRHILVSTKQQAEEVIKELRQGKKFEVIAKEK 286
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEY 269
D KL+ G + F++ + P T G
Sbjct: 287 SIDDQTKLK----------GGDLGWAPRGIYEKSFEDAAFALTKVGQISPPVQTSYGWHV 336
Query: 270 IAICDKRDLGGEIALKAYLSAQN 292
I + + + L Q
Sbjct: 337 IQLLGREK---DRPLTETQRQQL 356
>gi|254301623|ref|ZP_04969067.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
406e]
gi|157810736|gb|EDO87906.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
406e]
Length = 220
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 67 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 110
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 111 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 170
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 171 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 213
>gi|332362621|gb|EGJ40419.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sanguinis SK49]
Length = 341
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 21/205 (10%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
F + + V + T+ G IT + K NG +++
Sbjct: 3 KKIFAGAVTLLSVAVLAACSNSEGKDIVTMKGNTITVNE------FYDQVKNNGAAQQVL 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q I E EK G VN F + G S F+ L + G+ + +K
Sbjct: 57 LQMTIKEVF----GEKYGKNVTDKEVNEAFDKMKTAYGTS---FAQVLAQSGLTEETYKD 109
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ +V+ K E+ K +N T E + + I +
Sbjct: 110 QIRT----NKLVEYAVK-KAAEKELTDENYKAAFENYT-PEVTAQII--KIDSEDKAKEV 161
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEK 221
+ + + A+ S++ + K
Sbjct: 162 LEKTKAEGADFSQIAKENSTDTATK 186
>gi|76819072|ref|YP_335569.1| putative rotamase [Burkholderia pseudomallei 1710b]
gi|254186693|ref|ZP_04893209.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei Pasteur 52237]
gi|76583545|gb|ABA53019.1| putative rotamase [Burkholderia pseudomallei 1710b]
gi|157934377|gb|EDO90047.1| putative peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei Pasteur 52237]
Length = 244
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 91 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 134
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 135 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 194
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 195 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 237
>gi|315924379|ref|ZP_07920601.1| peptidyl-prolyl cis-trans isomerase [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622258|gb|EFV02217.1| peptidyl-prolyl cis-trans isomerase [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 266
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 56/289 (19%)
Query: 40 SRIRTTINGEVITDGD----ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
++ T+ G+ IT I + ++Q E + + E+I + L + + I
Sbjct: 16 DQVLATVEGKEITQSQLDLLIEQAPQDQQMQFRTHEGRRQLLNEMIAQELFYLKGKAEKI 75
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
++ F + E F + + FM
Sbjct: 76 E-ETEEYQKEFAEM-------TEKFLK-----------------------SYMISHFMSS 104
Query: 156 YGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
E E+ N+ + K I +L + + K E++
Sbjct: 105 VKVEEDELRQYYNENQDKFIAPDSVRCSHILVPAKQQAIDIIEEIDTGGKTFEQAAKAYS 164
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTT-NPYVTQKGVEYIA 271
D + ++ G Y + + +F+ + T P TQ G I
Sbjct: 165 ADASNKDR---------GGDLGYFHKGQMVAEFEMAAFSLNPGEMTSAPVQTQFGWHIIQ 215
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK---LRSNAIIHYY 317
D + + +A + + +K YV + L+ Y+
Sbjct: 216 CTDHK-TNEIVPYEAARDSLHRFLLGQKQNRRYVAEAEDLKK----QYH 259
>gi|294669050|ref|ZP_06734136.1| putative PPIC-type PPIASE domain protein [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309042|gb|EFE50285.1| putative PPIC-type PPIASE domain protein [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 291
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 52/304 (17%), Positives = 92/304 (30%), Gaps = 37/304 (12%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL---- 80
F I++ S ++ + T+NG I G+I ++I L++ +L
Sbjct: 6 FLPALIMALFSGSLMAETLLTVNGNKIDSGEIDRQIKLIRQDNPQIPDSPELRNQLLSNT 65
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLA 139
+ L QE + + F + N SA++ QG + FKQ
Sbjct: 66 VTRMLVNQEARRLKLEQGQE-----FKTASENARKSAKE-------QGADKHADFKQQ-- 111
Query: 140 IQSIWPDVVKN----DFMLKYG----NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
W D F+ + EI + + ++ P+
Sbjct: 112 ----WDDYQAALLIQAFVSHIIKTNPISDQEIRRAYDESRKYYQGSSEVQLGEILTPNKA 167
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
Q + K R + K I+ A LE + P + +
Sbjct: 168 DAEQAIKDLKAKKPFTDTAR-KYSADPAVKQTGGIN--PEFDALKDLEQSVPPIYAAVKD 224
Query: 252 KSQNNTTNPYVTQKGV-EYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ T+ V GV I DKR L + + + ++ + V L
Sbjct: 225 LKKGQFTSTPVVGNGVFGIFYIHDKRPLQ--LPPFEQVQNNIRRSLQQQKISRAVDALYQ 282
Query: 311 NAII 314
A I
Sbjct: 283 KATI 286
>gi|240142444|ref|YP_002966954.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Methylobacterium extorquens AM1]
gi|240012388|gb|ACS43613.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Methylobacterium extorquens AM1]
Length = 266
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 29/181 (16%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHF-------KQYLAIQSIWPDVVKNDFMLKYGNL 159
+ S +G+ + A Q++ +VK + + ++
Sbjct: 60 AGFIAGQVVDVAILSDAARLEGVSPPTVDADRDYGRDSQAAQAMLNKIVK-ESAPEESDV 118
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
A + EY R +L + + L +G R+ + +
Sbjct: 119 RSAYDAQVPGL------EYRARHILVATEEQALAARG------------RIVAGERFEDV 160
Query: 220 EKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
+ S + G + L + P+F + S + P +Q G I + + R
Sbjct: 161 ARSVSSDRSTVPAGGDLGWFLRDRMVPEFGTAVAALSPGALSEPVRSQFGWHLIRLDETR 220
Query: 277 D 277
Sbjct: 221 P 221
>gi|237714319|ref|ZP_04544800.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1]
gi|229445483|gb|EEO51274.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D1]
Length = 514
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 93/304 (30%), Gaps = 53/304 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG + +
Sbjct: 5 LLLGCI-SLFVVAVFAQEDPVLMRVNGREVLRSEF------------------------- 38
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S + + L E G+ F++
Sbjct: 39 -ENAYRRYAERSNARLSPKE----YAALFAQSKLKVE----AARAAGLDTTTVFRKQ--H 87
Query: 141 QSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ W ++V++ + K + + K +K + R + + +P +
Sbjct: 88 EKCWTELVESYLIDKQVMDSCARVLYQKMGLKARSGRV-QVMQIFKRLPQTVTSRHLEEE 146
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
K D+ R+ + + D + LE+ +F+++ ++ +
Sbjct: 147 KARMDS-IYRVIQNQPDLNFNRLVEIYSDDKQSRWIEGLETT--SEFEDVAFSLAKGTVS 203
Query: 259 NPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
P+ T +G+ + + D+ + E + + + T +++ + +
Sbjct: 204 QPFFTPEGIHILKVIDREEAFAYEDVSGRLIERLRRKEILDKGTAAMLDRLKRSWQYTPN 263
Query: 310 SNAI 313
A+
Sbjct: 264 QAAM 267
>gi|224536048|ref|ZP_03676587.1| hypothetical protein BACCELL_00912 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522331|gb|EEF91436.1| hypothetical protein BACCELL_00912 [Bacteroides cellulosilyticus
DSM 14838]
Length = 513
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 97/303 (32%), Gaps = 54/303 (17%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS----KRIALLKLQKING 70
++ + +I+ C+ +V +A + ING+ I + K AL +++
Sbjct: 1 MIRSGLTIILLCLGLVV----FAQQDPVLMRINGKEILRSEFEYIYNKNNALAGIEQKT- 55
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
V + LK E +G+ + F L+
Sbjct: 56 --LSEYVDLFVNFKLKVAAAEAAGLD-------------------TTRAFREELE----- 89
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPD 189
+ + ++ E+ KMK N + + + +P
Sbjct: 90 ------------GYRRQLAKAYLTDESVSELAARQVYDKMKANNRAGQIRVSHIFKFLPQ 137
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ ++ + L ++ D K+ ++ + +F+++
Sbjct: 138 TVTSH--VLRSAEARMDSLYAALQNGQADFDECVRNFSD--EKKSFWVSWLQMPVEFEDV 193
Query: 250 L-KKSQNNTTNPYVTQKGVEYIAICDKRDL-GGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ Q + P+ T +G+ + +++++ E + Q+ +++ V+K
Sbjct: 194 VFALKQGEISRPFFTPQGIHIVKAIERKEILPFEKVKDEIMRRQSRRYGMDRGTEALVEK 253
Query: 308 LRS 310
L+
Sbjct: 254 LKK 256
>gi|221198210|ref|ZP_03571256.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD2M]
gi|221209208|ref|ZP_03582200.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD2]
gi|221170946|gb|EEE03401.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD2]
gi|221182142|gb|EEE14543.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD2M]
Length = 644
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G +
Sbjct: 25 GFVGIQGFRGFFDESANVAAVNGHKITRVEFDGAFRQQIDQARQALGAQFDIKAFDTPDH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ +
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLMS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|262408152|ref|ZP_06084699.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_22]
gi|294645122|ref|ZP_06722847.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294809726|ref|ZP_06768413.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|262353704|gb|EEZ02797.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_22]
gi|292639546|gb|EFF57839.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294443060|gb|EFG11840.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
Length = 515
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 93/304 (30%), Gaps = 53/304 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG + +
Sbjct: 6 LLLGCI-SLFVVAVFAQEDPVLMRVNGREVLRSEF------------------------- 39
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S + + L E G+ F++
Sbjct: 40 -ENAYRRYAERSNARLSPKE----YAALFAQSKLKVE----AARAAGLDTTTVFRKQ--H 88
Query: 141 QSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ W ++V++ + K + + K +K + R + + +P +
Sbjct: 89 EKCWTELVESYLIDKQVMDSCARVLYQKMGLKARSGRV-QVMQIFKRLPQTVTSRHLEEE 147
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
K D+ R+ + + D + LE+ +F+++ ++ +
Sbjct: 148 KARMDS-IYRVIQNQPDLNFNRLVEIYSDDKQSRWIEGLETT--SEFEDVAFSLAKGTVS 204
Query: 259 NPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
P+ T +G+ + + D+ + E + + + T +++ + +
Sbjct: 205 QPFFTPEGIHILKVIDREEAFAYEDVSGRLIERLRRKEILDKGTAAMLDRLKRSWQYTPN 264
Query: 310 SNAI 313
A+
Sbjct: 265 QAAM 268
>gi|304405785|ref|ZP_07387443.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
gi|304345028|gb|EFM10864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
Length = 320
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 96/287 (33%), Gaps = 34/287 (11%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
++ I G+ IT+ D++K +L + G + ++ E +K E G+T
Sbjct: 53 EGKVLAIIGGKPITEQDLTK-----ELHRQYGAS--MLRTMMLHEAVKL-EAAAQGLTVT 104
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ ++ + G AE + ++ G+ + + + + +
Sbjct: 105 AEQLSAELARTMEGYGSEAEYYEEMQEQLGLSREDVQADAEYRLLLEQIATRAITVTDDQ 164
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
++ + + + V E +R +L + V +++ D E+ L
Sbjct: 165 IDEYL--AEHASEFTGVTELKLRWIL----TGTRSDANDVIEKLSDGEDFALMAKTYSID 218
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ----NNTTNPYVTQKGVEYIAICD 274
G Y+ E + LL + T P T+ G I + +
Sbjct: 219 A------FTSEQGGDLGYI-EDNDPLVEAALLDATHSLDVGQVTGPVKTEGGYAIIRLDE 271
Query: 275 KRDLGG-------EIALKAYLSAQNT--PTKIEKHEAEYVKKLRSNA 312
+R+ G E A + Q P ++ +Y + R+ A
Sbjct: 272 RREREGMALGQRREEARRQVSLEQARPLPEVEDELLRKYGEDKRNPA 318
>gi|172060885|ref|YP_001808537.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
gi|171993402|gb|ACB64321.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
Length = 644
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQRE 193
>gi|296390946|ref|ZP_06880421.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa PAb1]
Length = 314
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 134 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELFRQAA 191
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL + L P + L++ + + P G
Sbjct: 192 DGDFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFH 251
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 252 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|254247971|ref|ZP_04941292.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
gi|124872747|gb|EAY64463.1| Parvulin-like peptidyl-prolyl isomerase [Burkholderia cenocepacia
PC184]
Length = 645
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGTIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|116747610|ref|YP_844297.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter
fumaroxidans MPOB]
gi|116696674|gb|ABK15862.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Syntrophobacter
fumaroxidans MPOB]
Length = 632
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 3/135 (2%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGK 233
++ R +LF + ++ + + + + + R KD +L + S + G
Sbjct: 265 QQVRARQILFRLKEDAAEEEIAKARSEAEKVLAEARKGKDFAELARKYSQDTATAKNGGD 324
Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
+ F + + ++ T G I + + +A +
Sbjct: 325 LGAFTRGQMLEPFSDAAFAMKKGEISDLVETPDGFHIIKVEEIIPEKTTSFEEARSGIEQ 384
Query: 293 TPTKIEKHEAEYVKK 307
+ + EA Y K
Sbjct: 385 AVKRQKAREAAYEKA 399
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 57/182 (31%), Gaps = 17/182 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGD---------ISKRIALLKL 65
++ +L+ V + S I+ E I++ D R L K
Sbjct: 13 MIKALLILVAIVFVWWGGATYQSKSDTAVVQIDDEFISERDYYNVYEKMVTRYRTQLGKA 72
Query: 66 QKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAEDF 120
L+ + LI L + + G++ + V +++ +
Sbjct: 73 WSEKLVEEMNLKGQVLDMLINRYLVSKAARELGLSASTEEVRRRILEYPVFLNDGRFDQL 132
Query: 121 S--SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
+ L ++ + F++ +A + ++ + + E+ A+ + Y
Sbjct: 133 TYERVLRQERLTPEGFEKDIAESIAYERLLNF-IKRQVVVTDEEVTADYRTNYGQVQIAY 191
Query: 179 LI 180
+
Sbjct: 192 AL 193
>gi|218440442|ref|YP_002378771.1| hypothetical protein PCC7424_3511 [Cyanothece sp. PCC 7424]
gi|218173170|gb|ACK71903.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
Length = 257
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 71/235 (30%), Gaps = 32/235 (13%)
Query: 44 TTIN--GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+N G +I +I + NG+L K Q+++ + + + ++ +T
Sbjct: 2 IMVNLQGVLIEWTEIE------SYLQKNGQL-KEICQKVLHQKIINRVAQERHLTVTDEE 54
Query: 102 VNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+ R L A D ++L + + W ++ + +
Sbjct: 55 IQAEADCFRRQMRLEKAADTLAWLADELMTPED----------WETGIRERLLTQ---KL 101
Query: 161 MEIPANKQKMKNITVREYLIRTVLF---SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E K+ K+ + ++ +P L + F Q ++ + + +
Sbjct: 102 AESLFGKEVEKSFAENKLNFEQIILYQIIVPYETLAWEIFYQIEEEEISFYQAAHLYNFD 161
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
++ ++L ++ P T++G I
Sbjct: 162 AKSRYYCGFEGQVYR---WILNPEISSVL---FSSKVGEVIPPLKTEQGYHLFLI 210
>gi|58040109|ref|YP_192073.1| peptidyl-prolyl cis-trans isomerase precursor [Gluconobacter
oxydans 621H]
gi|58002523|gb|AAW61417.1| Peptidyl-prolyl cis-trans isomerase precursor [Gluconobacter
oxydans 621H]
Length = 308
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 68/240 (28%), Gaps = 44/240 (18%)
Query: 42 IRTTINGEVITDGDISKRIALL---KLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ T+NG IT GD+ + L Q L + V +L+ + + EK G+
Sbjct: 50 LIATVNGAKITLGDVQRAAGNLPPQARQIQPSVLVPLIVNQLVDQKAVQFAAEKEGLNHK 109
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ A ++ ++ +
Sbjct: 110 PD------------------------------VKAAMDAAAANALQNAYLEEKVGPLVTD 139
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
M E R +L D++ Q + + + K A+ K +
Sbjct: 140 SAMHDFYQSHYANKKPEEEIHARHILV---DSEAQAKDIIAQLGKGAD-----FGKLAAQ 191
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQKGVEYIAICDKR 276
L K + G + + D+ P F N + P TQ G I + R
Sbjct: 192 LSK-DKGSAGANGGDLGWFKKEDMLPAFSAAAFAMKPNTISQTPVHTQYGWHVIQVLATR 250
>gi|13488227|ref|NP_085712.1| hypothetical protein mlr9159 [Mesorhizobium loti MAFF303099]
gi|14027961|dbj|BAB54553.1| mlr9159 [Mesorhizobium loti MAFF303099]
Length = 360
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 45/326 (13%), Positives = 101/326 (30%), Gaps = 58/326 (17%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F ++ + + VP+ + S + + I +R + Q++ +
Sbjct: 3 FKRVYAAALLSLPLTTVPLTALSS-----------DDDPIVLSIGHERWTASQFQRLMLD 51
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE-DFSSFLD--KQG 128
+E + + + Q A + L + D L ++G
Sbjct: 52 TPPQVKEE---------AAAEPDVFAKRYADMHLLAQLAESRHLDQDADIRQRLAWVREG 102
Query: 129 IGDNHFKQ--YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF- 185
+ N K Y Q + V+ + + +Y ++ ++
Sbjct: 103 VMANAAKNDLYQRTQVG-NEEVRRYYDEHVSDF----------------VDYTLQHLVIG 145
Query: 186 ----SIPDNKLQNQGFVQKRIKDAEESRLRL--PKDCNKLEKFASKIHDVSIGKAQYLLE 239
N + +AE+ R +L ++ +L + S D S L E
Sbjct: 146 YHGAESARNVGRKDMAEDDARAEAEQLRKQLLEGENFAELVQCYS-YDDDSKSDGGLLPE 204
Query: 240 SD----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQN 292
+ L Q + +N ++P T G + + + D E A + L +Q
Sbjct: 205 TASRNLLPEIAQGIADLKENEISHPIKTLYGYHLVRVIKRSDNSFEDARRHIVNLLKSQI 264
Query: 293 TPTKIEKHE-AEYVKKLRSNAIIHYY 317
+I+ + + + A I ++
Sbjct: 265 VDQQIDAIIWRRRLSDVFAAAHIPWH 290
>gi|119713671|gb|ABL97722.1| hypothetical protein MBMO_EB0-39H12.0098 [uncultured marine
bacterium EB0_39H12]
Length = 269
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 93/310 (30%), Gaps = 59/310 (19%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
K L + VL IF ++ +++ + N I + +I+ I Q
Sbjct: 2 AKRLFIFLVLGIFILIADLTFNDESD--------NKITIFESEINSLIGTWVTQVGREPT 53
Query: 73 EKIA---VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +++L+ E + +E K G+ + +
Sbjct: 54 LQEIDGIIRQLLDEEILYREAMKLGLDKNDIII--------------------------- 86
Query: 130 GDNHFKQYLAIQSIW-PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
K+ LA + + + + + +K K + V FS
Sbjct: 87 -----KRRLAQKIGFLRQEADSSLPSEEQVSDFY---SKNIDKYFVAKRLTFSHVYFSTN 138
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
DN + + + S + + F+SK SI + + QN
Sbjct: 139 DN-GKTLAEEALILIKSGASESDFGEPFLLGKNFSSK----SISEIERSFGKQFSENIQN 193
Query: 249 LLKKSQNNTTNPYVTQKGVEYIAICDKRDL---GGEIALKAYLSAQNTPTKIEKHEAEYV 305
++ + P ++ G I + D E ++ + EY+
Sbjct: 194 II---PKEWSGPLDSEYGSHLIYVNSISDSFTPSLEEIKDIVINDVILEKQNNSV-NEYL 249
Query: 306 KKLRSNAIIH 315
K+LR+ I
Sbjct: 250 KELRNKYQIE 259
>gi|256830955|ref|YP_003159683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfomicrobium
baculatum DSM 4028]
gi|256580131|gb|ACU91267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfomicrobium
baculatum DSM 4028]
Length = 632
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 47/151 (31%), Gaps = 18/151 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKINGE 71
IK+L + + + ++ + + T+N I +R L+L +
Sbjct: 14 IKILFGIIIAVFVLAFGMNRVQN--DQTTVVATVNDSPILFRPFQERLQRSLELARSQNP 71
Query: 72 L-----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR----NTGLS 116
++ ++++++E L Q+ K G+T + +
Sbjct: 72 NLTAEILAQMGFKRQILEQMVIEELMMQQAAKLGLTVSKEELAKEIHLIPAFQNESNVFD 131
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ + L + F+ + +
Sbjct: 132 PASYQNVLRANNLTPGKFESEYMRGMVMDKL 162
Score = 42.3 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 3/129 (2%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
E E +QK + + +L + +N + + A + L
Sbjct: 244 AAVSPEETEKYYAEQKEQFKIEEQVKASHLLVRVDENADEESVEKAMQTIKAAQKDLAAG 303
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
K ++ ++ + G+ + + F++ + + P TQ G I
Sbjct: 304 KSFAEVAAQYTEDPSGTQTGGELGWFGRGRMVKPFEDAAFALEKGAVSEPVRTQFGFHLI 363
Query: 271 AICDKRDLG 279
+ D + G
Sbjct: 364 TVEDTKSAG 372
>gi|171322244|ref|ZP_02911086.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MEX-5]
gi|171092428|gb|EDT37778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MEX-5]
Length = 644
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S ING IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAINGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMNDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQRE 193
>gi|46580311|ref|YP_011119.1| hypothetical protein DVU1902 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449728|gb|AAS96378.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
Length = 312
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 87/306 (28%), Gaps = 44/306 (14%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----------- 69
+L + ++ A+ + T+NG + + LL+
Sbjct: 1 MLAVTLLLSAGGCADDALPPGVVATVNGHPV-------NMKLLQATHDAYAQSWTGAEGP 53
Query: 70 --GELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + +L+V+ L Q++ G + + + F + L
Sbjct: 54 SVEALRSQYGAVLADLVVQELVLQKLAAVGASVTDAELGAAEAEV--RGDYPEGMFEAAL 111
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY-LIRTV 183
+ + +++ L + + + E+ + + + E+ L V
Sbjct: 112 VEDYLDLEVWREMLRRRLALTKFAQVVLRSEVAISLEEVESWYRGHQG----EFRLAARV 167
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
F + + + + + + K + +++ I + +
Sbjct: 168 RFIMVEGDTREGVEAAAGAVASGAAPEEVEKAFPGMSG-----NELLIRR------DRIP 216
Query: 244 PQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKH 300
+Q L + P + + + + AY + + K++
Sbjct: 217 AAWQKALAALKPGGVSPPIAFEGRWVAFRLIESLPAQDMSVVDAYPVIERRLLEEKLDAA 276
Query: 301 EAEYVK 306
+V+
Sbjct: 277 FDVWVE 282
>gi|148555285|ref|YP_001262867.1| hypothetical protein Swit_2370 [Sphingomonas wittichii RW1]
gi|148500475|gb|ABQ68729.1| hypothetical protein Swit_2370 [Sphingomonas wittichii RW1]
Length = 286
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 86/281 (30%), Gaps = 48/281 (17%)
Query: 41 RIRTTINGEVITDGDISKRIALLKL--QKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+I +NGE I+ +++ + ++ +L K +Q LI L Q+ + G+
Sbjct: 28 QILAIVNGEEISLQELNAELQGTRIPDSVDRDKLRKQVLQRLIDRKLIVQKAREQGLDKT 87
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V L + L + +A PD +
Sbjct: 88 PEYVTQ-------QRRLEENLLVTMLGQ----------KIASTVPMPD-----------D 119
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
++ + + + L+ + F+ P + Q +A + ++
Sbjct: 120 RDITQYIADNPTQFASRQRLLLDQIQFAAPKDPKQLLTLRDAHTLEALATGIQ------- 172
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIA--ICDKR 276
K+ + L P ++ + P+V +Y+A I +
Sbjct: 173 ------KLGLGMSRGKGVIDTGRLDPALVKVINQLPPG--EPFVLPSNGQYVASVIVGRD 224
Query: 277 DLGGEIALKAYLSAQNTP-TKIEKHEAEYVKKLRSNAIIHY 316
+ +A+ ++ V + R++A I Y
Sbjct: 225 ATPTPTPIARQAAAEMVRRKELVAESKAQVARARTSAEIQY 265
>gi|145220375|ref|YP_001131084.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Prosthecochloris
vibrioformis DSM 265]
gi|145206539|gb|ABP37582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeovibrioides DSM 265]
Length = 704
Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 4/98 (4%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKAQYL 237
+L N + + D L+ + +L + S G +
Sbjct: 351 ASHILIRFNPNSRA-DIQKGRALSDMILRELKAGGNFAELARRYSADPGSAARGGDLGWF 409
Query: 238 LESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ P+F + + P TQ G+ I +
Sbjct: 410 RSDRMVPEFADAVFASKPGAIVGPVQTQFGLHIIKVAG 447
>gi|294672825|ref|YP_003573441.1| peptidylprolyl isomerase domain-containing protein [Prevotella
ruminicola 23]
gi|294471979|gb|ADE81368.1| peptidylprolyl isomerase domain protein [Prevotella ruminicola 23]
Length = 452
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 77/262 (29%), Gaps = 25/262 (9%)
Query: 34 KSWAMSSRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ + + E I D+ + + ++ K +G + +++ V+ L K + +
Sbjct: 19 SIGTVIDEVVWVVGDEAILRSDVEALRMQSAMEGVKWSGNPDCTIPEQIAVQKLFKHQAQ 78
Query: 92 KSGITFDSNTVNYFFVQ----HARNTGLSAEDFSSFLDKQGIG------DNHFKQYLAIQ 141
I V Q S E + Q + K +Q
Sbjct: 79 IDSIEVTDADVAQEVEQQISYWLEMVDGSRERLEEY-KHQNLTQIRADLREEMKDRQMVQ 137
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ +V+ D + + A Q E ++ V + Q + +
Sbjct: 138 KMKQKLVE-DIAVTPAEVRRYFSALPQDSLPFVPTEVEVQIVQLT----PKIEQEELNRV 192
Query: 202 IKDAEESRLRLPKD---CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQ 254
+ R+ K L + S+ + G+ + L P F +
Sbjct: 193 KDELRNYTERVNKGETRFQTLAQLYSEDPGSARRGGELGLMGRGTLDPAFAAVAFNLTDP 252
Query: 255 NNTTNPYVTQKGVEYIAICDKR 276
+ ++ G I + +KR
Sbjct: 253 KKVSKIVESEFGFHIIQLIEKR 274
>gi|78187764|ref|YP_375807.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium luteolum
DSM 273]
gi|78167666|gb|ABB24764.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium luteolum
DSM 273]
Length = 701
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 4/103 (3%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--S 230
+ +L + +D +L+ L + S S
Sbjct: 341 ASQPVARASHILIGFNPANRAEAQQAGAKAQDIL-RQLKGGASFADLARRYSADIGSARS 399
Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAI 272
G+ + + P+F + + + P T+ G+ I +
Sbjct: 400 GGQLGWFRSERMVPEFADAVFSAAPGTVVGPVATRFGLHIIKV 442
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 49/135 (36%), Gaps = 19/135 (14%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGD-IS 57
MTS + LL + LI+F +++ A + ++NG + ++ + I
Sbjct: 4 MTSMRDKTHIILYTLLAAFLALIVFEWG--MNFSGPAGRNGQAGSVNGTPVPYSEYEEIY 61
Query: 58 KRIALLKLQKINGE---------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
++ + Q G L++ A L+ + L +++ K IT + + + +
Sbjct: 62 RQYSENYRQSNPGADISPEAELGLKEQAWNTLVDQKLLEEQFRKFRITIEDSEILAAIQR 121
Query: 109 -----HARNTGLSAE 118
+
Sbjct: 122 PDPPQIIARNFMDPA 136
>gi|190574687|ref|YP_001972532.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family
protein [Stenotrophomonas maltophilia K279a]
gi|190012609|emb|CAQ46237.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family
protein [Stenotrophomonas maltophilia K279a]
Length = 299
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 92/298 (30%), Gaps = 52/298 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
+S + R ++ I++ DI++ + + + + A + L+V L + E ++
Sbjct: 36 RSLGQPAPCRLFVDETAISEADIAREMQHHRAMR-PEQSRAEAARALVVRELLRLEAQRL 94
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ +S E+ L +Q + ++ K +
Sbjct: 95 GLQAPE------------GNRVSDEE---VLIQQ-LLEDAIKDRVPSDEDCRRYF----- 133
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + + +R +L + P + + + + + P
Sbjct: 134 ------------EQNPERFRSPDRVRLRHILLAAPADDVAGRFAARTEGERLVGLLKESP 181
Query: 214 KDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
+ + G +L P+F + + + + P ++ G +
Sbjct: 182 HLFADFALRHSRCPSSSEGGDLGWLQRGQTTPEFDRQVFRLREGLAGFPVESRWGYHVVC 241
Query: 272 ICDKRDLGGEIALKAYL-----------SAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ D R+ G +A L + + + + Y + ++ + A I
Sbjct: 242 V-DAREEGQPQPFEAVLPQLRDYLELQVRQREVQAYLLQLQERYPVRGLDEIEAEADI 298
>gi|255656246|ref|ZP_05401655.1| putative protein export chaperone [Clostridium difficile QCD-23m63]
Length = 253
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 60/174 (34%), Gaps = 20/174 (11%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGEL--------EKIAVQELIVETLKKQEI 90
SS + TI + IT + KR+ L + E ++ +I + E
Sbjct: 87 SSEVVATIGDKKITGEMLRKRMEPLFYLNAKTTMTDDEIRSYESNMIETMITSDILSSEA 146
Query: 91 EKSGITFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
K I+ ++ ++ + + G++ E+F D ++Y+ +
Sbjct: 147 AKEKISITNDQLDAQYNNLMSSIESAMGMTKEEFLKQFDLT-------EKYIKDDMK-KE 198
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+V + ++ + + + N + +L D+K + +K
Sbjct: 199 LVASKYLNEKSKVTDKEAENYYNKNKNNYLQVRASHILIKTVDDKGKQVSNSKK 252
>gi|37527725|ref|NP_931070.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36787161|emb|CAE16237.1| Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 623
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 19/150 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE------ 71
++I+ ++ V + + +NG+ I+ + + + LQ+ G+
Sbjct: 19 ALIILSFVLTGVGGYLTSGAGSYAAEVNGQAISRAQLEQAFQQERNALQEQLGDKFSVLA 78
Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDF 120
+ A+ LI L Q + G++ V + +
Sbjct: 79 SDEQSMKQIRNQALDRLINNALIDQYSRELGLSASDEQVKDSIRNTSYFQTDGKFDNNKY 138
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
L++ + + F + + ++
Sbjct: 139 LELLNRFNMSPDIFAEQTRQNLVNQQLIMA 168
>gi|193214032|ref|YP_001995231.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton
thalassium ATCC 35110]
gi|193087509|gb|ACF12784.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton
thalassium ATCC 35110]
Length = 728
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 17/147 (11%), Positives = 52/147 (35%), Gaps = 6/147 (4%)
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHD 228
+ + ++ ++P + + R ++ R++ +D + K S K+
Sbjct: 240 RRPKTQPIRASHIMVALPKSPTPSDTLKAYRKAESILRRIQKGEDFQSIAKKESDDKLSG 299
Query: 229 VSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALK 285
G + + F+ K + + T G I + + + + + +
Sbjct: 300 ARGGDLGLFGLNRMVKPFETAAFALKQAGDLSPIIRTPFGYHIILLTGREEPKSYDESKE 359
Query: 286 AYLSAQNTPTKIEKHEAE-YVKKLRSN 311
+ ++ KHE + ++++L+
Sbjct: 360 LLKRLLSRNSEKLKHERDLFIQQLKET 386
>gi|299536706|ref|ZP_07050016.1| hypothetical protein BFZC1_11817 [Lysinibacillus fusiformis ZC1]
gi|298727820|gb|EFI68385.1| hypothetical protein BFZC1_11817 [Lysinibacillus fusiformis ZC1]
Length = 323
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 85/256 (33%), Gaps = 28/256 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI-----RTTINGEVITDGDISKRIALLKLQKING 70
L VL++ ++ +S+ I I+G+VIT ++ ++ +++ G
Sbjct: 31 LAVIAVLLLGNVLWFISWLIPNKGQEIGSDEQVAAIDGDVIT-----RQEWMIAMEERYG 85
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
K +Q L+ ET+ ++ + I ++ + + F + + Q +
Sbjct: 86 ---KETLQNLVNETVMEKAAKTYKIKVTDKEIDLELALM----RSAQDKFDTAM--QNLS 136
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+Q + Q I V+ D +++ N+E N+ T V D+
Sbjct: 137 AEQLRQKIRSQLILDKVLTKDVVIEEENVEKYYEENQGLYNTKTSYRTNFIEV-----DS 191
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL 250
K + + ++ + L + S IG E+ +
Sbjct: 192 KKAADEALGELKNGSDFTVLAREISVDSA----SASLGGDIGFLTENQENVDPAIINTVK 247
Query: 251 KKSQNNTTNPYVTQKG 266
N + + G
Sbjct: 248 SLKANEVSKAFKLDNG 263
>gi|119897994|ref|YP_933207.1| putative cell binding factor [Azoarcus sp. BH72]
gi|119670407|emb|CAL94320.1| putative cell binding factor [Azoarcus sp. BH72]
Length = 260
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 82/279 (29%), Gaps = 59/279 (21%)
Query: 47 NGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
NG I ++ A+L Q+ G +L +EL+ + QE K GI
Sbjct: 31 NGTAIPA---ARSEAMLAEQRAQGAQDNPQLRDAVREELVRREVLSQEAGKKGID-KKAD 86
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK---QYLAIQSIWPDVVKNDFMLKYGN 158
+ A+ L ++ + D K + + ++ ++
Sbjct: 87 IQAQM-DMAKQAVLIRAYLQDYVKNNPVTDAELKKEYDSIKSRMG-----DKEYKPRHVL 140
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
+E E A + ++ + + + R +++
Sbjct: 141 VESEEHA---------------KEIIGKLNGGAKFDDLAKESRDPGSKD----------- 174
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKR 276
G + F + ++K + T P + G I + D R
Sbjct: 175 -----------KGGDLGWTTPDRFVKPFSDAMVKLEKGKYTAAPVKSDYGFHVIMLDDVR 223
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+L + Q ++ +++ LR+ A +
Sbjct: 224 ELKA--PPFEEVKPQLQQRLQQQKVEKHILDLRTKAKVQ 260
>gi|325518979|gb|EGC98507.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
TJI49]
Length = 644
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G +
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPDH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGTIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQHLSELAAQQRE 193
>gi|320354707|ref|YP_004196046.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus
propionicus DSM 2032]
gi|320123209|gb|ADW18755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobulbus
propionicus DSM 2032]
Length = 626
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 43 RTTINGEVITDGDISK---RIALLKLQKINGELEK----------IAVQELIVETLKKQE 89
+NG+ I+ D + R Q+ G+L + + +LI L +Q
Sbjct: 41 VAVVNGKEISYRDFQQNYERAIEGYKQQFGGQLPEKFVESLGVKDQVLNQLIQSELLRQG 100
Query: 90 IEKSGITFDSNTVNYFFVQHA----RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
EK G+T N + + + L + + F+ + +
Sbjct: 101 AEKMGMTISKEATQRKIQDLEVFRDENGRFDLDRYKTVLAQNRLSPTSFEAGIGNDLLMN 160
Query: 146 DVVKN 150
V++
Sbjct: 161 RAVES 165
>gi|221215062|ref|ZP_03588029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD1]
gi|221164998|gb|EED97477.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD1]
Length = 644
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDESANVAAVNGHKITRVEFDGAFRQQIDQARQALGAQFDIKAFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ +
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLMS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|167619701|ref|ZP_02388332.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia
thailandensis Bt4]
gi|257138861|ref|ZP_05587123.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia
thailandensis E264]
Length = 644
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 79/238 (33%), Gaps = 37/238 (15%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGMLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ +T V +
Sbjct: 69 MLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLSDPVVASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+Q+ ++ ++ D + Q + + + ++
Sbjct: 189 EQQRE---------VQQMMLKSADYATKVQPTDAQISAYYDAHKQAFATREAATIQYL 237
>gi|326795821|ref|YP_004313641.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas
mediterranea MMB-1]
gi|326546585|gb|ADZ91805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas
mediterranea MMB-1]
Length = 613
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 69/201 (34%), Gaps = 21/201 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI-----SKRIALLKL 65
I + F+++ F + + + + SS ++G+ IT + ++R L+ +
Sbjct: 11 SLIVKIIIGFIVVTFALFGVDALVTSFNSSETVAEVDGKEITRTQVLQTADTQRRQLISM 70
Query: 66 QKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTG 114
N + L++ A+ LI + K + + + ++ Q+ +
Sbjct: 71 MGNNIDPSLLDENLLQRRALDSLIELAVLKNQADGLELGVSDAQIDSLLVSAEQYQTDGV 130
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ + + G +K+ + V + E +P+ + +
Sbjct: 131 FDQNKYLNAIRSLGFTPLAYKERIK-----ESYVLSQLRSAVTESEFALPSQVNAISELQ 185
Query: 175 VREYLIRTVLFSIPDNKLQNQ 195
++ V FS+ D Q
Sbjct: 186 NQKRTYEYVQFSLADQTEQTD 206
>gi|309806668|ref|ZP_07700664.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 03V1-b]
gi|312870840|ref|ZP_07730945.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
3008A-a]
gi|308166973|gb|EFO69156.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 03V1-b]
gi|311093530|gb|EFQ51869.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
3008A-a]
Length = 297
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 89/307 (28%), Gaps = 37/307 (12%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F K L T ++ F V + + S+ G IT D K +
Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQED------FYNKVKKSPA 52
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ I +I TL++Q G VN + + G F L + G+
Sbjct: 53 GQAILANMIINRTLQQQ----YGSQVSKKKVNTAYDNARKQYG---ARFEMVLQQNGMTP 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+K+ + + +++ A ++K + ++ +L
Sbjct: 106 EAYKESIQTNLL--------LQAALKDIKPITKAQEKKAWKEYQPKVRVQHILV------ 151
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
+ K++ + K + + ++ L F+
Sbjct: 152 --EKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKEAAF 209
Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKK 307
K T P TQ G I + G + K+ + A+ + + +
Sbjct: 210 KLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIIARIYQKMAQDQNVIKSVLGV 269
Query: 308 LRSNAII 314
+ A +
Sbjct: 270 VLKRANV 276
>gi|297566395|ref|YP_003685367.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus
DSM 9946]
gi|296850844|gb|ADH63859.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus silvanus
DSM 9946]
Length = 322
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 67/233 (28%), Gaps = 30/233 (12%)
Query: 63 LKLQKINGELEKIA---------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
L+ Q + E A + L + + E++G+ V + AR
Sbjct: 58 LQRQGMPATPESEAQFERFKPQFLGRLAKDYAVIKASERAGLAASKEAVENQVAE-ARKD 116
Query: 114 GLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
S E F+ L + GI + ++ + + ++ + E + +
Sbjct: 117 FESDEAFNQALSQVGIASIDDYRMLVYEALTYNAYLE-QLQEQVKPSESALRLIYGLSQA 175
Query: 173 --ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV- 229
T Y +L D + + + D L K S+
Sbjct: 176 EFTTPETYCASHILVVSGDEAISLIRQLGQ------------GADFATLAKQYSQDPGSK 223
Query: 230 -SIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKRDLG 279
+ G F+N +++ T+ P T+ G I +
Sbjct: 224 DNGGDLGCEPRGTYVAPFENAMIRLKAGQTSREPVRTEFGFHIIRLNKIEPST 276
>gi|78066690|ref|YP_369459.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
gi|77967435|gb|ABB08815.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
383]
Length = 644
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|107028901|ref|YP_625996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116689941|ref|YP_835564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
gi|105898065|gb|ABF81023.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia AU 1054]
gi|116648030|gb|ABK08671.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia HI2424]
Length = 645
Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGTIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQHLSELAAQQRE 193
>gi|329576836|gb|EGG58321.1| PPIC-type PPIASE domain protein [Enterococcus faecalis TX1467]
Length = 342
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKDIQKNFDEAKEQVEAQGGKFSDALKQAGLTEKTFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|326316510|ref|YP_004234182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323373346|gb|ADX45615.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 642
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 61/201 (30%), Gaps = 9/201 (4%)
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQ--YLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
A + ++ ++ + F+Q + +Q + D+ + ++
Sbjct: 201 DFAAKVTPTDDELQAYYKAH---EAQFRQPEHADVQYVVLDLDAVRASITLSEDDLRSYY 257
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFAS 224
+ + E +L + P + K A ++R P ++ + S
Sbjct: 258 KENLERLAGKEERRASHILINAPKDAPAADREKAKARAQALLEQVRKAPNTFAEVARKNS 317
Query: 225 KIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ S G + D+ F++ + + ++ ++ G I + D +
Sbjct: 318 QDSGSAPSGGDLGFFKRGDMVKPFEDAAFSMKKGDISDLVESEYGYHIIQLNDVKTPKQP 377
Query: 282 IALKAYLSAQNTPTKIEKHEA 302
+ + + +
Sbjct: 378 TFEEVRAKLETEAKQQQAQRK 398
Score = 39.3 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKINGEL 72
++ + ++I ++ + + S + ++G IT D D + R+ +++ + +
Sbjct: 13 MIVLFLLIIPSFVLVGIDRNYFTSKSAVVARVDGHDITQDDWDNAHRMETDRIRAQSPSV 72
Query: 73 EK----------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-------NTGL 115
+ ++ L+ + + + K + + + L
Sbjct: 73 DARLLDSPRARYATLERLVRDRVMQAAAVKMHLVTSDAQLARTLQGIPAIAALKRPDGSL 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
AE + + + QG+ F+ + + V+ + E
Sbjct: 133 DAEAYRALVGSQGLTPEGFENNVRRELSLSQVMGGVMGSAFAAQE 177
>gi|319899225|ref|YP_004159318.1| peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
gi|319403189|emb|CBI76748.1| peptidyl-prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
Length = 317
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 88/285 (30%), Gaps = 54/285 (18%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S + I+G+ IT G + ++A++ I L + E+ +T
Sbjct: 49 SHVMAVIDGKNITAGQLD----------------ELALE--INPNLVRIPDEQRRVTVLK 90
Query: 100 NTVN-YFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+N + A G+ E + + + + Q + +++ + K
Sbjct: 91 AYLNMQALAKAALKKGMDKTEAYDKRMAV-------MRDNILQQLYFKEMI----VDKIA 139
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ +++ +K+ E R +L + V KR+ E KD
Sbjct: 140 DADVKALYDKEIAALPKEDEIKARHILVKTKE----EAEAVIKRLNKGENFEEVAKKDST 195
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICDK 275
G Y + F+ N T P + G I + D+
Sbjct: 196 DG-------SSAVGGDLGYFSRGQMVKPFEEAAFNLKVNEYTKKPVESPFGWHVIKVEDR 248
Query: 276 R----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
R + ++ K L Q + + + LRS + Y
Sbjct: 249 RLKQPPVFDDV--KDVLRTQLIRERYQTL----IPDLRSEVNVQY 287
>gi|49085090|gb|AAT51251.1| PA0699 [synthetic construct]
Length = 315
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 134 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELYRQAA 191
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL + L P + L++ + + P G
Sbjct: 192 DGDFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFH 251
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 252 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|1574034|gb|AAC22665.1| peptidyl-prolyl cis-trans isomerse, putative [Haemophilus
influenzae Rd KW20]
Length = 594
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 40/361 (11%), Positives = 102/361 (28%), Gaps = 94/361 (26%)
Query: 36 WAMSSRIRTTINGEVITDGDI-----------SKRIALLKLQKINGE-----LEKIAVQE 79
A + +NGEVI+ D ++R + + + L + V
Sbjct: 8 LAQMIPMPAKVNGEVISQQDFLNRYNQEFEIRAQREGEAFVAQSDSPEFVTALRQNIVNL 67
Query: 80 LIVETLKKQEIEKSGITFDSNTV-----------------NYFFVQHARNTGLSAEDFSS 122
+I + L +Q +++ + + N + + + L+++ ++S
Sbjct: 68 MIDQELLRQYVKELKLGVSDEMIKRAIVTDPNFQVKGKFDNAVYQRILQQNHLTSDGYAS 127
Query: 123 FLD--------KQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMKN 172
L + G+ ++ F + Q V + + A + +
Sbjct: 128 ILRASLPLEQIQNGVANSEF--IVPAQVKNSAEVFFQKRLARLATLSLADEMAKQSVSDD 185
Query: 173 ITVREYLIRTVLFSIPD-------------------------------NKLQNQGFVQKR 201
Y F P+ NK Q
Sbjct: 186 EIKTYYEANQKSFVQPEQVKVQYIDLSADNISRNLQVTDVEIAQYYQDNKAQFMTQHLAH 245
Query: 202 IKDAEESRLRLP----KDCNKLEKFASK-----IHDVSIGKAQYLLESDLHPQFQNLLKK 252
I+ A E ++ + A I + G ++ E++L F++
Sbjct: 246 IQFANEQDAKVAYEELQKGANFADVAKAKSLDKISGENGGDLGWVNENELPKAFEDAAAA 305
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLG--------GEIALKAYLSAQNTPTKIEKHEAE 303
Q + P + + +++ ++ K+ + ++ + + +
Sbjct: 306 LQVGQYSQPINVDGNYHIVLVQERKAQSLENVKAQIADLVRKSLMESRYFSLEKQASDKA 365
Query: 304 Y 304
+
Sbjct: 366 F 366
>gi|237748739|ref|ZP_04579219.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes OXCC13]
gi|229380101|gb|EEO30192.1| peptidyl-prolyl cis-trans isomerase [Oxalobacter formigenes OXCC13]
Length = 647
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 73/225 (32%), Gaps = 31/225 (13%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+S ++ +N F+ A + + + + + + P V
Sbjct: 201 AAYRSKVSVTDEELNAFYK--AHEAQFTIPEHADV------------EVIVLDM--PSVA 244
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
KN +K + +++ ++ K + E + +L ++ N + + K+ + +
Sbjct: 245 KN---IKISDADLQSYYSQNKDRFSIPEERRAQHILIAVNKNATEAEKSEAKKKAEGILA 301
Query: 209 RLRL-PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
L+ P +L K S+ + G + + F + + + + ++ T
Sbjct: 302 ELKANPARFAELAKANSQDPGSAQNGGDLGFFTRGKMVKPFNDAVFGMKKGDISDLVQTD 361
Query: 265 KGVEYIAICDKRDLGG-------EIALKAYLSAQNTPTKIEKHEA 302
G I + D + + L+ Q K +
Sbjct: 362 FGYHIITVSDIKPAVAKPLAQVRDRVLQELTREQ-ANRKFAEMSE 405
>gi|94969502|ref|YP_591550.1| hypothetical protein Acid345_2475 [Candidatus Koribacter versatilis
Ellin345]
gi|94551552|gb|ABF41476.1| hypothetical protein Acid345_2475 [Candidatus Koribacter versatilis
Ellin345]
Length = 234
Score = 45.0 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 9/142 (6%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI------NGELEKIAVQELIVETL 85
S ++ + R+ +++ I D + +A LQ+ + +Q L+ + L
Sbjct: 20 SSRAGEVIDRLVASVDSTPILQSDWDEAVAFEALQQGRLISSFTENDRREVLQHLVDQRL 79
Query: 86 KKQEIEKSGITFDSN-TVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ +I S I + + + E + S L G+ ++ Q
Sbjct: 80 IQAQIGDSQIAAAEEREITKSLDDLRKLYPQATTDEAWRSLLQTYGLDQETVRRKTTAQL 139
Query: 143 IWPDVVKNDFMLKYGNLEMEIP 164
+ + ++
Sbjct: 140 EALRFINLRLRPESRIARADVE 161
>gi|161524527|ref|YP_001579539.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans ATCC 17616]
gi|189350717|ref|YP_001946345.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia multivorans
ATCC 17616]
gi|160341956|gb|ABX15042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans ATCC 17616]
gi|189334739|dbj|BAG43809.1| peptidyl-prolyl cis-trans isomerase D [Burkholderia multivorans
ATCC 17616]
Length = 644
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDESANVAAVNGHKITRVEFDGAFRQQIDQARQALGAQFDIKAFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ +
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVREALLSDPMIASLKKPDGSIDVERYAQLMS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|312882503|ref|ZP_07742244.1| peptidyl-prolyl cis-trans isomerase D [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369903|gb|EFP97414.1| peptidyl-prolyl cis-trans isomerase D [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 619
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 58/200 (29%), Gaps = 20/200 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS--- 57
M ++ S + +++ F + Y SS N E I+ GD
Sbjct: 1 MMERMREGASGVAVKVILGVIILSFVFTGVSGYIGSGASSSAAKVGNDE-ISRGDFEREY 59
Query: 58 --KR-----------IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+R LL Q K + +I + L ++ E G+ V
Sbjct: 60 QNQRNQMQAQLGDYFSNLLADQNYVNTFRKSVLDRMIDDKLIERHAESLGLRVSDAQVRQ 119
Query: 105 F---FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
F Q + + + L + G + F + L + + +
Sbjct: 120 QIFEFPQFQVEGKFDEDVYQATLRRAGFTAHTFSEDLRKNILREQLRNAIEGTDFSLAGE 179
Query: 162 EIPANKQKMKNITVREYLIR 181
+K + V++ +
Sbjct: 180 VESQSKLISQTRDVKKITLS 199
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 62/210 (29%), Gaps = 21/210 (10%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D + A+ LS E+ + + + + + + I ++
Sbjct: 192 DVKKITLSLSDFAKKVKLSDEEINDYYQQH-TSQYTRPEQMKVAYI--ELSAEKLKNNIV 248
Query: 158 NLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + A K + + + +L + N+ QK + D
Sbjct: 249 VSDNDAKAYYQDNIDKYTSEEQRRVSHILI-----QGDNKEKAQKVLDKLNA-----GAD 298
Query: 216 CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIA 271
L K S+ + G ++ + P+F+ K TT ++ G I
Sbjct: 299 FATLAKEDSEDVGSAEEGGSLGWIERDVMDPEFEKAAFALKQPGETTGLVKSEFGYHIIK 358
Query: 272 ICDKR--DLGGEIALKAYLSAQNTPTKIEK 299
+ + + + ++ + + K
Sbjct: 359 LDELKAPETESYETVEKAIKQELKDQKAAD 388
>gi|241663130|ref|YP_002981490.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12D]
gi|240865157|gb|ACS62818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12D]
Length = 646
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 45/400 (11%), Positives = 108/400 (27%), Gaps = 106/400 (26%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKL 65
+ L+ V F + SY S+ SS ++G+VI+ ++ R+ L ++
Sbjct: 10 RLMFLVLLILVFPSFVFFGVQSYSSFMDSSHDAAKVDGKVISTNEVDARVREQTERLRQM 69
Query: 66 QKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTV--------------- 102
+ + + +I + + E+ ++ +T + +
Sbjct: 70 LGAQYDPRQFEGPQMRRDVLDGIIQQRVLANEVTRANLTISNEKIRDTILQIPAVAALRK 129
Query: 103 ------NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+V+ ++ E L + + ++ + +V ++
Sbjct: 130 PDGSFDQEAYVRLLSAQNMTPEQLEGNLRFELSQQQIPQSIVSSAFVPKSLVDRLIQVRD 189
Query: 157 GNLEMEI--------PANKQKMKNITVREYLIRTVLFSIPDNKLQN-------------Q 195
E++ A Y FS+P+
Sbjct: 190 QQREVQALLFKPADYAAKVNADDKAIQAYYDAHQQEFSVPEQVKAEYVVFSGEEMMKQIP 249
Query: 196 GFVQKRIKDAEESRLRL-----------------------------------------PK 214
++ + +++ R P
Sbjct: 250 VTPEQIKEYYDQNAARFKTQEERRAAHILIKLPDNAKPADKEAAKKKAEEVLAEVRKNPA 309
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
L K S + G+ +L + P F+N L K + ++ + G I
Sbjct: 310 SFADLAKKYSGDPGSAAQGGELGFLGKGATVPPFENALFALKQPGDISDVVQSDFGFHII 369
Query: 271 AICDKRDLG------GEIALKAYLSAQNTPTKIEKHEAEY 304
+ + + G + L+ L Q K + +
Sbjct: 370 KLEEVKGGGVQPLEAVKPELERELRTQLANKKYSELADAF 409
>gi|121609649|ref|YP_997456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
gi|121554289|gb|ABM58438.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
Length = 643
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 176 REYLIRTVLFSIPDN-KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIG 232
+E +L S+ + + + R + + P D L K +S K + G
Sbjct: 269 QERRASHILISVAKDAPAAEREKAKARATELLAQLRKTPADFAPLAKQSSDDKGSAAAGG 328
Query: 233 KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLS 289
+ + F+ + + ++ T+ G I + D + G +A ++
Sbjct: 329 DLNFFARGAMTKPFEEAVFALKKGQISDVVETEFGYHIIELTDIKTPPQPGFEEARAVIA 388
Query: 290 AQNTPTKIEKH 300
A+ + ++
Sbjct: 389 AELGQQRAQRQ 399
>gi|310766848|gb|ADP11798.1| putative protease maturation protein [Erwinia sp. Ejp617]
Length = 623
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 24/202 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKIN------ 69
++I+ I+ V S +NG+ I + + R ++
Sbjct: 20 LIILSFILTGVGGYLTGGSGDYAAKVNGQEIGRAQLERAFSSERARQQQMLGEQFSVLAG 79
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFS 121
++ + A+ +LI E L Q ++ G+ + + + +
Sbjct: 80 NEGYMQQMRQQALSQLIDEMLLTQYAKEIGLAIGDDQIKQAIFTQPAFQTDGKFDNAKYL 139
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
S ++ G + + + L Q ++ + + + + ++ L+R
Sbjct: 140 SIINNMGFTADQYAEALRKQLTTQQLIG-----SVTGTDFVLGNETDSLAALVAQQRLVR 194
Query: 182 TVLFSIPDNKLQNQGFVQKRIK 203
V ++ + ++
Sbjct: 195 EVTINVNAMAAKQNVTQEEIAN 216
>gi|283479299|emb|CAY75215.1| putative protease maturation protein [Erwinia pyrifoliae DSM 12163]
Length = 623
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 92/302 (30%), Gaps = 35/302 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKIN------ 69
++I+ I+ V S +NG+ I + + R ++
Sbjct: 20 LIILSFILTGVGGYLTGGSGDYAAKVNGQEIGRAQLERAFSSERARQQQMLGEQFSVLAG 79
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFS 121
++ + A+ +LI E L Q ++ G+ + + + +
Sbjct: 80 NEGYMQQMRQQALSQLIDEMLLTQYAKEIGLAIGDDQIKQAIFTQPAFQTDGKFDNAKYL 139
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
S ++ G + + + L Q ++ + + + + ++ L+R
Sbjct: 140 SIINNMGFTADQYAEALRKQLTTQQLIG-----SVTGTDFVLGNETDSLAALVAQQRLVR 194
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
V ++ + ++ ++ + L + +L+
Sbjct: 195 EVTINVNALAAKQNVTQEEIANYYQQHQSSLMSPEQFRVSYIKMDASA-------MLQPV 247
Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
Q+ ++ Q++ T P + + I K + L A + ++
Sbjct: 248 SESDIQSWYQQHQDDYTQPQRNRYSI----IQTKTEAEARSVLDALNKGGSFAKLAKEKS 303
Query: 302 AE 303
A+
Sbjct: 304 AD 305
>gi|259909248|ref|YP_002649604.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Erwinia
pyrifoliae Ep1/96]
gi|224964870|emb|CAX56392.1| Peptidyl-prolyl cis-trans isomerase D [Erwinia pyrifoliae Ep1/96]
Length = 622
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 92/302 (30%), Gaps = 35/302 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQKIN------ 69
++I+ I+ V S +NG+ I + + R ++
Sbjct: 19 LIILSFILTGVGGYLTGGSGDYAAKVNGQEIGRAQLERAFSSERARQQQMLGEQFSVLAG 78
Query: 70 -----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSAEDFS 121
++ + A+ +LI E L Q ++ G+ + + + +
Sbjct: 79 NEGYMQQMRQQALSQLIDEMLLTQYAKEIGLAIGDDQIKQAIFTQPAFQTDGKFDNAKYL 138
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
S ++ G + + + L Q ++ + + + + ++ L+R
Sbjct: 139 SIINNMGFTADQYAEALRKQLTTQQLIG-----SVTGTDFVLGNETDSLAALVAQQRLVR 193
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
V ++ + ++ ++ + L + +L+
Sbjct: 194 EVTINVNALAAKQNVTQEEIANYYQQHQSSLMSPEQFRVSYIKMDASA-------MLQPV 246
Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
Q+ ++ Q++ T P + + I K + L A + ++
Sbjct: 247 SESDIQSWYQQHQDDYTQPQRNRYSI----IQTKTEAEARSVLDALNKGGSFAKLAKEKS 302
Query: 302 AE 303
A+
Sbjct: 303 AD 304
>gi|254244936|ref|ZP_04938258.1| hypothetical protein PA2G_05813 [Pseudomonas aeruginosa 2192]
gi|126198314|gb|EAZ62377.1| hypothetical protein PA2G_05813 [Pseudomonas aeruginosa 2192]
Length = 314
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 134 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELYRQAA 191
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL + L P + L++ + + P G
Sbjct: 192 DGDFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFH 251
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 252 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|302878839|ref|YP_003847403.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella
capsiferriformans ES-2]
gi|302581628|gb|ADL55639.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gallionella
capsiferriformans ES-2]
Length = 631
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 44/395 (11%), Positives = 100/395 (25%), Gaps = 99/395 (25%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVIT--DGDISKRIALLKLQK-- 67
+ +L+I S+ S + T+NGE IT + D + R K+++
Sbjct: 9 RRFVQIVLLLIILPFAFFGVDSYRHSGDTDAPATVNGEKITKQEFDTAMRQQQDKMRQVL 68
Query: 68 ---------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--------- 109
E+++ + L+ + L + + +G+T +
Sbjct: 69 GENFDPALFEKAEMKRAILDNLVAQRLLLERAKAAGLTVTDEQIAQVIGGIDAFKDGGKF 128
Query: 110 ---------ARNT------------GLSAEDFSSFLDKQGIGDNHFKQYLAIQ------S 142
A L+ + + G N +
Sbjct: 129 DKARYTSALAAQNMTPAIFEARVKDELTGQQMRDAYTQNGYVSNAVADNIIAINEQQRIV 188
Query: 143 IWPDVVKNDFMLKYGNLEMEIPA----------------------------NKQKMKNIT 174
++ FM + + I K +K
Sbjct: 189 SIAPILSRSFMAQAKVDDAAIKTYFDANQKEFQVPEQVKVEYVKFSIADLIAKADIKAEE 248
Query: 175 VREY--------------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PKDCNKL 219
VR+Y +L + Q + K + ++++ P L
Sbjct: 249 VRQYYDEHQSEFASAEQRQASHILLVVAATAPQAEQDAVKAKAEKLLAQVKQEPGKFADL 308
Query: 220 EKFASKIHD--VSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ S+ V+ G + F + + + + G I + +
Sbjct: 309 ARQNSQDPGSAVNGGDLGMFGRGMMVKPFDEAVFSLKAGEISGLVKSDFGYHIIKLTAIK 368
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A+ ++ A+ +L
Sbjct: 369 --ASRATPFNEVQAEIAGKLRQQKAADSFAELADK 401
>gi|29375282|ref|NP_814435.1| rotamase family protein [Enterococcus faecalis V583]
gi|257077560|ref|ZP_05571921.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis JH1]
gi|257086046|ref|ZP_05580407.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis D6]
gi|294780469|ref|ZP_06745834.1| putative foldase protein PrsA [Enterococcus faecalis PC1.1]
gi|46396846|sp|Q837Y9|PRSA_ENTFA RecName: Full=Foldase protein prsA; Flags: Precursor
gi|29342742|gb|AAO80506.1| rotamase family protein [Enterococcus faecalis V583]
gi|256985590|gb|EEU72892.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis JH1]
gi|256994076|gb|EEU81378.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis D6]
gi|294452468|gb|EFG20905.1| putative foldase protein PrsA [Enterococcus faecalis PC1.1]
gi|315025711|gb|EFT37643.1| putative foldase protein PrsA [Enterococcus faecalis TX2137]
Length = 342
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKDIQKNFDEAKEQVEAQGGKFSDALKQAGLTEKTFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|116048605|ref|YP_792596.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa UCBPP-PA14]
gi|115583826|gb|ABJ09841.1| probable peptidyl-prolyl cis-trans isomerase, PpiC [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 314
Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 134 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELYRQAA 191
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL + L P + L++ + + P G
Sbjct: 192 DGDFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFH 251
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 252 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|325913389|ref|ZP_08175756.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII
60-B]
gi|329919662|ref|ZP_08276640.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN
1401G]
gi|325477315|gb|EGC80460.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners UPII
60-B]
gi|328937314|gb|EGG33738.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN
1401G]
Length = 297
Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 89/307 (28%), Gaps = 37/307 (12%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F K L T ++ F V + + S+ G IT D K +
Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQED------FYNKVKKSPA 52
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ I +I +TL++Q G VN + + G F L + G+
Sbjct: 53 GQAILANMIINKTLQQQ----YGSQVSKKKVNTAYDNARKQYG---ARFEMVLQQNGMTP 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+K+ + + +++ A ++K + ++ +L
Sbjct: 106 EAYKESIQTNLL--------LQAALKDIKPITKAQEKKAWKEYQPKVRVQHILV------ 151
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
+ K++ + K + + ++ L F+
Sbjct: 152 --EKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKEAAF 209
Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKK 307
K T P TQ G I + G + K+ + + + + +
Sbjct: 210 KLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIITRIYQKMAQDQNVIKSVLGV 269
Query: 308 LRSNAII 314
+ A +
Sbjct: 270 VLKRANV 276
>gi|330721964|gb|EGG99902.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium
IMCC2047]
Length = 471
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 26/190 (13%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I V ++ E+ + ++ ++ + + ++ + DF
Sbjct: 48 IVISDAEVQAYYE----------ENLADYMSEESLKIEYL-----------ELKQADFAS 86
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E EI Q+ + + R I + + Q I+ +++ +
Sbjct: 87 NIDVDEAEIEQLYQQETDALAAQQERRAAHILITEEARSSNEAEQLIIELQN--KIKAGE 144
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIA 271
D +L K S+ + G ++ + P+F+ +L ++ ++ T+ G I
Sbjct: 145 DFAELAKRYSEDPGSAENGGDLGFVEKGAFVPEFEQVLFSLNEGEVSDIVETEFGYHLIR 204
Query: 272 ICDKRDLGGE 281
+ + R E
Sbjct: 205 LEELRTPEAE 214
>gi|332851740|ref|ZP_08433665.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150]
gi|332865885|ref|ZP_08436665.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113]
gi|332729747|gb|EGJ61082.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013150]
gi|332734935|gb|EGJ66021.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6013113]
Length = 621
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +L++F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G+++E + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQD 154
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 358
>gi|78189176|ref|YP_379514.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium
chlorochromatii CaD3]
gi|78171375|gb|ABB28471.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium
chlorochromatii CaD3]
Length = 697
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 7/131 (5%)
Query: 180 IRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQY 236
+L P NK + + Q ++ ++ + +P L K S + G +
Sbjct: 348 ASHILLRFNPANKAEIEKVQQLTMQIGQQLQAGVP--FETLAKQYSADPGSAENGGDLGW 405
Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+ P+F + + P TQ GV I + D +A + + +++
Sbjct: 406 FSPDRMVPEFSKAVFNSRPGAIIGPIQTQFGVHIIKVTGF-DQRALVASEVVRTIRSSSE 464
Query: 296 KIEKHEAEYVK 306
+E +
Sbjct: 465 SMESQRRRAMA 475
>gi|15595896|ref|NP_249390.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Pseudomonas
aeruginosa PAO1]
gi|254239075|ref|ZP_04932398.1| hypothetical protein PACG_05257 [Pseudomonas aeruginosa C3719]
gi|9946581|gb|AAG04088.1|AE004505_9 probable peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa PAO1]
gi|126171006|gb|EAZ56517.1| hypothetical protein PACG_05257 [Pseudomonas aeruginosa C3719]
Length = 314
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 134 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELYRQAA 191
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL + L P + L++ + + P G
Sbjct: 192 DGDFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFH 251
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 252 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|55980321|ref|YP_143618.1| peptidyl-prolyl cis-trans isomerase [Thermus thermophilus HB8]
gi|55771734|dbj|BAD70175.1| peptidyl-prolyl cis-trans isomerse, PpiC family [Thermus
thermophilus HB8]
Length = 608
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 42/311 (13%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIV---- 82
+ + +NG+ + + D LL+LQ + + ++ L+
Sbjct: 28 FTPQAAQQTRGKPVLWVNGKALYELD------LLRLQGNDPLYAASPEGLLKTLVDTYFL 81
Query: 83 ------ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFK 135
E LK+ + S V + GL + FL++ G D +
Sbjct: 82 EQVILTEALKQDAAR---VRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLR 138
Query: 136 QYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ Q I + + K E+ K T R ++ +
Sbjct: 139 AEVKTQLQIQKRLEQIRSGAKPTEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEEL 198
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK-AQYLLESDLHPQFQNLLKKS 253
+ A +R + + + Q + +++ +
Sbjct: 199 AAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQVVFPTEVGEA---VFALK 255
Query: 254 QNNTTNPYVTQKGVEYIAICDK--------RDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
P + + + ++ +A A K Y+
Sbjct: 256 GPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAER------AKGNGVLEAYL 309
Query: 306 KKLRSNAIIHY 316
++LR A + +
Sbjct: 310 EELRKKAQVRF 320
>gi|257870832|ref|ZP_05650485.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
gallinarum EG2]
gi|257804996|gb|EEV33818.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
gallinarum EG2]
Length = 342
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 65/207 (31%), Gaps = 22/207 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKS-WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ +L + +++ + SS T+ G IT D ++ Q + +
Sbjct: 1 MKKKLILAAVSALSVLTLAACSGSSSNEIATMKGGKITVEDFYEQAK--TDQNNQSLIRQ 58
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ V ++ +K G ++ + Q A+ G S + F S L+ G+ +
Sbjct: 59 LIVLKVFD--------QKYGDDVTEKMIDKQYDQTAKQYGDS-DKFESALEASGLTKKSY 109
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ + Q + + E+ A + L +
Sbjct: 110 REQIRQQLALQE----GLKANMDIGDDELKAAWDSFHP------EVEAQLIKLTSEDDAK 159
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + A+ S+L K +
Sbjct: 160 DVLKEAQKDGADFSKLAKEKSTDTATA 186
>gi|312796419|ref|YP_004029341.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI
454]
gi|312168194|emb|CBW75197.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia
rhizoxinica HKI 454]
Length = 638
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 84/282 (29%), Gaps = 39/282 (13%)
Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS---GITFD---SNTVNYFF 106
D+ + LL +Q + EL E ++ Q + GI ++
Sbjct: 133 TYDVDQYKQLLAMQGMTP--------ELFDERVRYQLASRQLPDGIQASAFAPKSLAQQL 184
Query: 107 VQHARNTG------LSAEDFSSFLDKQGIGDNHF------------KQYLAIQSIWPDVV 148
+ + L A D++ + + + + + + D +
Sbjct: 185 ASLSEQSREVQGLMLRATDYADKVQPSDVQLKQYYDAHHDAFAMPERASVEYLMLSADAL 244
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
L+ + K K E +L ++ + Q + ++ ++ +
Sbjct: 245 AQRAQPSEAELKKYYDDHAAKFKTPG--EVRASHILIAVAASASQAERDKARQKAESILA 302
Query: 209 RLRL-PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQ 264
++ P+ KL + S G + + F + K ++ ++ +
Sbjct: 303 QVTAHPEQFAKLAQQNSDDPGSKNKGGDLGFFGPGMMVKPFSDAAFKLKKDQISSIVQSD 362
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
G I + D + + T K E+ YV+
Sbjct: 363 FGYHIIKVTDIKPEQT-KPFDEVKATIATELKAEQATKAYVE 403
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 61/196 (31%), Gaps = 20/196 (10%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALL 63
F + + L + V + ++++ S ++ G IT + + + R L
Sbjct: 5 FRNHKRLMMFLLVILIAPGLGFVGVQGFRNFFDDSADVASVAGRKITRAEYEGAMREQLD 64
Query: 64 KLQKING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV---NYFFVQH 109
+ +++ G E+ + + L+ + + + E ++ V
Sbjct: 65 RARQVLGANFDAKAIDTPEMRRAILDSLVQQRVLAKATEDLHLSASDQAVLRAEQSIPAI 124
Query: 110 ARNTG----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
A + + L QG+ F + + Q + + +
Sbjct: 125 AALRKPDGTYDVDQYKQLLAMQGMTPELFDERVRYQLASRQLPDGIQASAFAPKSLAQQL 184
Query: 166 NKQKMKNITVREYLIR 181
++ V+ ++R
Sbjct: 185 ASLSEQSREVQGLMLR 200
>gi|71066028|ref|YP_264755.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter
arcticus 273-4]
gi|71039013|gb|AAZ19321.1| possible PpiC-type peptidyl-prolyl cis-trans isomerase
[Psychrobacter arcticus 273-4]
Length = 624
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 86/313 (27%), Gaps = 86/313 (27%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY------------------FFVQHARNT 113
L + ++ LI TL +Q+ K G+T +T+N F R
Sbjct: 81 LHEQVLKGLIDRTLLEQQAGKLGMTVSDDTINRLLRQEEIFKGEDGEFSNDQFASFLRQR 140
Query: 114 GLSAEDF---------SSFLDKQGIGDNHFKQYLAIQSI---------------WPDVVK 149
++ L+ +G + Q I W D V
Sbjct: 141 NMTKNQLFAEFRNQLSLDQLNASIVGTAAYPMKAVSQLIDLQLESRNIWLHRFNWQDYVS 200
Query: 150 NDFMLKYGNLEMEIPANKQKMKNIT------------------------VREYLIRTVLF 185
L +++ ANK +K+ ++Y
Sbjct: 201 -QVKLNKSDIQAYYDANKDTLKSAAMVDLAYLQLSPQTIQVNEVTKEDLQQQYEAYKQSL 259
Query: 186 SIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLES 240
++ D + +Q + K D ++RL + KL K S + G S
Sbjct: 260 AVVDERKISQILLTGSDAKARADKVKARLAKGEVFTKLAKTESDDPSGEAGGDIGRFNPS 319
Query: 241 DLHPQFQNLLKKSQ----NNTTNPYVTQKGVEYIAIC--------DKRDLGGEIALKA-- 286
+ K + + + P T G + + + ++ KA
Sbjct: 320 VFGNDAAAVEKALEGLSVGDVSVPVKTSFGYQIFTVTEDSGSKIPSLESMRDDLTAKAKE 379
Query: 287 YLSAQNTPTKIEK 299
Y + K+
Sbjct: 380 YKRQEVYADKVTA 392
>gi|229548632|ref|ZP_04437357.1| peptidylprolyl isomerase [Enterococcus faecalis ATCC 29200]
gi|255971145|ref|ZP_05421731.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T1]
gi|255973769|ref|ZP_05424355.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T2]
gi|256617573|ref|ZP_05474419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis ATCC 4200]
gi|256761456|ref|ZP_05502036.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T3]
gi|256957443|ref|ZP_05561614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis DS5]
gi|256964476|ref|ZP_05568647.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis HIP11704]
gi|257089114|ref|ZP_05583475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis CH188]
gi|257415255|ref|ZP_05592249.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis AR01/DG]
gi|257420948|ref|ZP_05597938.1| rotamase [Enterococcus faecalis X98]
gi|300861731|ref|ZP_07107811.1| putative foldase protein PrsA [Enterococcus faecalis TUSoD Ef11]
gi|307269720|ref|ZP_07551050.1| putative foldase protein PrsA [Enterococcus faecalis TX4248]
gi|307272499|ref|ZP_07553752.1| putative foldase protein PrsA [Enterococcus faecalis TX0855]
gi|307277028|ref|ZP_07558134.1| putative foldase protein PrsA [Enterococcus faecalis TX2134]
gi|307284552|ref|ZP_07564714.1| putative foldase protein PrsA [Enterococcus faecalis TX0860]
gi|312904295|ref|ZP_07763457.1| putative foldase protein PrsA [Enterococcus faecalis TX0635]
gi|312953070|ref|ZP_07771920.1| putative foldase protein PrsA [Enterococcus faecalis TX0102]
gi|229306263|gb|EEN72259.1| peptidylprolyl isomerase [Enterococcus faecalis ATCC 29200]
gi|255962163|gb|EET94639.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T1]
gi|255966641|gb|EET97263.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T2]
gi|256597100|gb|EEU16276.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis ATCC 4200]
gi|256682707|gb|EEU22402.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T3]
gi|256947939|gb|EEU64571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis DS5]
gi|256954972|gb|EEU71604.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis HIP11704]
gi|256997926|gb|EEU84446.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis CH188]
gi|257157083|gb|EEU87043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis ARO1/DG]
gi|257162772|gb|EEU92732.1| rotamase [Enterococcus faecalis X98]
gi|300848256|gb|EFK76013.1| putative foldase protein PrsA [Enterococcus faecalis TUSoD Ef11]
gi|306503229|gb|EFM72483.1| putative foldase protein PrsA [Enterococcus faecalis TX0860]
gi|306506272|gb|EFM75436.1| putative foldase protein PrsA [Enterococcus faecalis TX2134]
gi|306510784|gb|EFM79801.1| putative foldase protein PrsA [Enterococcus faecalis TX0855]
gi|306513830|gb|EFM82432.1| putative foldase protein PrsA [Enterococcus faecalis TX4248]
gi|310628979|gb|EFQ12262.1| putative foldase protein PrsA [Enterococcus faecalis TX0102]
gi|310632391|gb|EFQ15674.1| putative foldase protein PrsA [Enterococcus faecalis TX0635]
gi|315031408|gb|EFT43340.1| putative foldase protein PrsA [Enterococcus faecalis TX0017]
gi|315034487|gb|EFT46419.1| putative foldase protein PrsA [Enterococcus faecalis TX0027]
gi|315144514|gb|EFT88530.1| putative foldase protein PrsA [Enterococcus faecalis TX2141]
gi|315146998|gb|EFT91014.1| putative foldase protein PrsA [Enterococcus faecalis TX4244]
gi|315154018|gb|EFT98034.1| putative foldase protein PrsA [Enterococcus faecalis TX0031]
gi|315156661|gb|EFU00678.1| putative foldase protein PrsA [Enterococcus faecalis TX0043]
gi|315159697|gb|EFU03714.1| putative foldase protein PrsA [Enterococcus faecalis TX0312]
gi|315162001|gb|EFU06018.1| putative foldase protein PrsA [Enterococcus faecalis TX0645]
gi|315170748|gb|EFU14765.1| putative foldase protein PrsA [Enterococcus faecalis TX1342]
gi|315578736|gb|EFU90927.1| putative foldase protein PrsA [Enterococcus faecalis TX0630]
gi|327534276|gb|AEA93110.1| peptidyl-prolyl cis-trans isomerase [Enterococcus faecalis OG1RF]
Length = 342
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKDIQKNFDEAKEQVEAQGGKFSDALKQAGLTEKTFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|239833408|ref|ZP_04681736.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301]
gi|239821471|gb|EEQ93040.1| Chaperone surA precursor [Ochrobactrum intermedium LMG 3301]
Length = 301
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 85/279 (30%), Gaps = 38/279 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
++NG I + DI L + Q + A+ + V
Sbjct: 41 AVSVNGVAINETDI-----LTEAQNHPSDNPGAALLA----------------AARALAV 79
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+Q AR G+ E + ++ ++ + V+ + E
Sbjct: 80 RELLLQRAREAGIVPEREKDAEGRSETDEDAL-----VRMVIEREVE---VPSATREEAL 131
Query: 163 IPANKQKMKNITVREYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + + +L + P + + + A + +
Sbjct: 132 RFYENNRHRFTSAPILEASHILIAADPADSQAREKARATAARLASAVIAEPATFASVAHE 191
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEYIAICDKR--- 276
++S G L P+F+ L++ + T P ++ G + + D+R
Sbjct: 192 YSSCPSGAQGGNLGQLTRGSTVPEFERALERMAAGEITANPIESRFGFHIVRL-DRRIEG 250
Query: 277 -DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+L + ++ + K ++Y+ L ++A I
Sbjct: 251 EELPFDYVADR-IAGWLEASTWSKAVSQYIAILAADAEI 288
>gi|331086426|ref|ZP_08335506.1| hypothetical protein HMPREF0987_01809 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406192|gb|EGG85715.1| hypothetical protein HMPREF0987_01809 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 246
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 64/290 (22%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-------EKIAVQELIVETLKKQEI 90
MS+ + + G+ IT+ ++ A L+ + + +++LI L Q
Sbjct: 1 MSNEVLAVVAGKEITNAELD---AFLQNAPREQQAYVTNPQFRQQYLEQLISLHLFAQAG 57
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
E + + E+F+ L+ K+ + Q + +K
Sbjct: 58 EDAKLE-------------------ETEEFAKILENA-------KRDILAQLAMRETLK- 90
Query: 151 DFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ E+ A + K + + +L D++ + ++ +
Sbjct: 91 ----DVTVTDEEVAAYYEENKQQFTKGETVSAKHILV---DSEEKCTSVLESITSGEKAF 143
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGV 267
+ ++ ++ G + + +F+ ++ + P TQ G
Sbjct: 144 E-------DAAKEASTCPSGARGGDLGEFGKGQMVKEFEEAAFAAEIGHVVGPVKTQFGY 196
Query: 268 EYIAICDKRDLGG-------EIALKAYLSAQN---TPTKIEKHEAEYVKK 307
I + K + E + + + K+++ + +Y++K
Sbjct: 197 HLIKVEKKNEASVAVFDEVKEAIKRNLIQQKQNAAYNAKVQELKEKYLQK 246
>gi|229546514|ref|ZP_04435239.1| peptidylprolyl isomerase [Enterococcus faecalis TX1322]
gi|307289957|ref|ZP_07569886.1| putative foldase protein PrsA [Enterococcus faecalis TX0411]
gi|229308414|gb|EEN74401.1| peptidylprolyl isomerase [Enterococcus faecalis TX1322]
gi|306499023|gb|EFM68512.1| putative foldase protein PrsA [Enterococcus faecalis TX0411]
gi|323479869|gb|ADX79308.1| Peptidyl-prolyl cis-trans isomerase PPIASE domain protein
[Enterococcus faecalis 62]
Length = 342
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKDIQKNFDEAKEQVEAQGGKFSDALKQAGLTEKTFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|325295071|ref|YP_004281585.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065519|gb|ADY73526.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 182
Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 23 IIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIALLKLQ----KINGELEKIAV 77
++F + + A S +I +NG+ IT+ + + + L + K N + + +
Sbjct: 4 LLFSLSMVAVTSLTAQGSDKILAKVNGKPITESQLEEVLKGLPAKYNSVKNNPQFQSQVL 63
Query: 78 QELIVETLKKQEIEKSGIT 96
LI + L QE +K GI
Sbjct: 64 NSLINQELLYQEAKKEGIE 82
>gi|239501895|ref|ZP_04661205.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB900]
Length = 621
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +L++F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G+++E + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQD 154
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 358
>gi|163781832|ref|ZP_02176832.1| hypothetical protein HG1285_03078 [Hydrogenivirga sp. 128-5-R1-1]
gi|159883052|gb|EDP76556.1| hypothetical protein HG1285_03078 [Hydrogenivirga sp. 128-5-R1-1]
Length = 437
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 39/332 (11%), Positives = 101/332 (30%), Gaps = 54/332 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKRIALLKLQKING 70
++ + +F + + K R +N I+ + ++ K +LL+ +++
Sbjct: 15 IIAVASLSFLFWMFSVSDIKQMFGLQRCAAAVNDYCISLREFNHELRKYQSLLEKEELRT 74
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
+++ + LI L Q+ G+ V + +
Sbjct: 75 LVKRQVLFSLINRELLYQKALDVGVVASDREVAELIKKDPQFQEGGKFSFKLYAETLERA 134
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP--------DVVKNDFMLKYGNLEMEIPA 165
GL+ ++ +L K + +++ + ++ F + L
Sbjct: 135 GLTPVEYEGYLKKS-LTIRKLLRFIKSGTYLSPKELEFQERILSARFSGRAYLLNASSVK 193
Query: 166 NKQKMKNITVREYLIRTVL-FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
K ++E+ R FS+P K R+ D K +
Sbjct: 194 LDYKPTLEELKEFYSRNAEKFSLPSVKR---------------FRVWETADKGKAQSIYR 238
Query: 225 KIHDVSIGKAQY-LLESDLHPQFQNLLKKSQNNTTNPY-----VTQKGVEYIAICDKRDL 278
++ + + E +L ++ ++ + T P+ + V Y+ +
Sbjct: 239 ELKRGKVPEGGSLFKEEELPSALKDTVRNLK--VTEPFTLTKVKGKYYVIYLEESSPGRV 296
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ + K + + ++LR
Sbjct: 297 KSFEEARKDIEKLLVEEKKAELVEKKARELRE 328
>gi|90407687|ref|ZP_01215866.1| peptidyl-prolyl cis-trans isomerase C [Psychromonas sp. CNPT3]
gi|90311156|gb|EAS39262.1| peptidyl-prolyl cis-trans isomerase C [Psychromonas sp. CNPT3]
Length = 93
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+K ++ + G + P+F ++ + P TQ G + + ++ D
Sbjct: 34 AQKHSTCPSGATGGDLGQFGPGQMVPEFDKVVFSAPIGEVQGPVKTQFGYHLLEVTERDD 93
>gi|212212179|ref|YP_002303115.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212]
gi|212010589|gb|ACJ17970.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuG_Q212]
Length = 522
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVSAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLTSAQFVAQL 153
>gi|300853330|ref|YP_003778314.1| putative foldase-like protein [Clostridium ljungdahlii DSM 13528]
gi|300433445|gb|ADK13212.1| putative foldase related protein [Clostridium ljungdahlii DSM
13528]
Length = 247
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 86/287 (29%), Gaps = 51/287 (17%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET----LKKQEIEKS 93
M + + +NG I + D+ + I K N + L+ E L +
Sbjct: 1 MQNNVLAIVNGMEIKESDLKEAINRFPQDKRNQLNTAEGKKYLLNEMVFFELAYSYAKDE 60
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ D ++ L+ K+ + Q V+
Sbjct: 61 NLEKDD-------------------EYLKMLESA-------KKEILTQIAISKVMN-KVN 93
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + ANK K + +L + ++ + K I +
Sbjct: 94 VTDKESQDYYEANKDMYKKPE--RLKAKHILV----DSIEKAKKISKEISEGMPFE---- 143
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAI 272
+K+++ G + P+F+N + + P TQ G I +
Sbjct: 144 ---EAAQKYSTCPSKAQGGSLGEFARGQMVPEFENAAFSLDIDVVSEPVKTQFGYHLIKV 200
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEA----EYVKKLRSNAIIH 315
+K + IA + +++ + ++ K+LRS +
Sbjct: 201 EEKIEPS--IASYDEVKNAIKNGLLQERQKYEYSKFNKELRSKYKVE 245
>gi|330809635|ref|YP_004354097.1| peptidylprolyl isomerase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377743|gb|AEA69093.1| putative peptidylprolyl isomerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 314
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 59/180 (32%), Gaps = 8/180 (4%)
Query: 141 QSIWPDVVKNDFMLKYG-NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q ++ D +++ + G E E+ K L R + + Q V+
Sbjct: 120 QIVFRDYLQSVSQVPAGYPSEDELKQAYDAGKANWTAPALYRVSQIFLATTEPQTVEAVR 179
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL-HPQFQNLLKKSQNN 256
++ + + P + L S+ + G + + L P + + +
Sbjct: 180 RQALELSKKAQASPAEFGALASRFSQDRSSAERGGDSGFQPLQQLVPPVRETVARLKVGA 239
Query: 257 TTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
++P + G I + ++ R+ + + A + E+ Y+ + A
Sbjct: 240 VSDPVQSPAGFHVIKLTEQQPAREATLDDVRERLTQA-LRAQRQEQIAKAYLDGMLDTAT 298
>gi|325265616|ref|ZP_08132306.1| peptidyl-prolyl cis-trans isomerase [Kingella denitrificans ATCC
33394]
gi|324982886|gb|EGC18508.1| peptidyl-prolyl cis-trans isomerase [Kingella denitrificans ATCC
33394]
Length = 608
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 47/156 (30%), Gaps = 6/156 (3%)
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-C 216
E+ A + I ++ + P + + + + D
Sbjct: 230 VSAEEVQAALKTATTNQKPTRRIAHIMINAPKSADAATRQKAREQAEKIAQEAKASPDKF 289
Query: 217 NKLEKFASKIHDVS--IGKAQYLLESDLH--PQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
+L K S+ + G L + L P K +Q ++ T G + +
Sbjct: 290 AELAKQYSQDTGSAQNGGDLGALTQGSLPAKPLDDAAFKLAQGAVSDVVETDFGYHIVRV 349
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ A +A + + K ++ + +++
Sbjct: 350 LEI-QGNDAAAQEARVRQELQLKKAQQAYEKIREEI 384
>gi|319792645|ref|YP_004154285.1| ppic-type peptidyL-prolyl cis-trans isomerase [Variovorax paradoxus
EPS]
gi|315595108|gb|ADU36174.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
EPS]
Length = 638
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 20/226 (8%), Positives = 63/226 (27%), Gaps = 29/226 (12%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
S +T + ++ H ++ I D+
Sbjct: 201 SKVTVSDADIEAYYKDHTSQF--------QAPEQANIEYLVL-----------DLDAAKK 241
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR- 211
+ +++ + + T E +L + P + K + + ++
Sbjct: 242 NVVVNEADLKTYYEQNTARFGTKEERRASHILITAPASMSAADREKAKAKAEQLLAEVKK 301
Query: 212 LPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
P + + S+ + G ++ + + F++ + + + T+ G
Sbjct: 302 APNTFADVARKNSQDPGSAEKGGDLDFVTKGAMVKPFEDAMFALKKGEISGVVETEFGYH 361
Query: 269 YIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
I + D + +++ + A + K + +
Sbjct: 362 IIHLVDIKPAVVPPFEQVRATIESEVRAAQAAQEFAKAAEVFTDAV 407
>gi|221067844|ref|ZP_03543949.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni KF-1]
gi|220712867|gb|EED68235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Comamonas
testosteroni KF-1]
Length = 632
Score = 44.6 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 27/237 (11%), Positives = 65/237 (27%), Gaps = 26/237 (10%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A+ L ++ I + A + + +F + +
Sbjct: 180 QQAMDALY---------QRREIQVARFDASA----FAGKVQPTEAELKAFYESH---TSQ 223
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNK 191
FKQ A + + E ++ + + E +L I K
Sbjct: 224 FKQPEAATVEYVQLDLATVEKSIVLSEDDLRTYYKENAARLAGPEERRASHIL--INAAK 281
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH-----DVSIGKAQYL-LESDLHPQ 245
+K AE+ ++ KD + A + G Y ++ + P
Sbjct: 282 DLPAAEREKAKAKAEQLLAQVRKDPKSFAQVAKANSQDPGSAANGGDLGYFGRDAMVKPF 341
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ + K Q + ++ + G I + + + + + +
Sbjct: 342 EEAVFKMKQGDISDVVESDFGFHIIELTGIKQPKVPTFEEMRPKLEADLKQQQAQRK 398
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 87/300 (29%), Gaps = 30/300 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-- 70
++ + ++I I V+ + SS+ ++G IT D D + R +L+ N
Sbjct: 13 MILLFLLIIPSFIFVGVNQNYFTESSQTVARVDGHDITQQDWDNAHRAESDRLRAQNPSM 72
Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-------NTGL 115
E +++L+ + + K +T + + + L
Sbjct: 73 DAKLLDSPEARYATLEKLVRDRVLAAAATKMHLTTPDAQLVRTLREIPAIASLQKPDGSL 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
AE + + + QG+ F+ L + V+ + A Q+ +
Sbjct: 133 DAEAYKALVGSQGMTPEGFEANLRRELALNQVLGA-----VSSTSFTTAAQLQQAMDALY 187
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ I+ F + Q + E + + ++
Sbjct: 188 QRREIQVARFDASAFAGKVQPTEAELKAFYESHTSQFKQPEAATVEYVQLDLATVEKSI- 246
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+L D + K++ P ++ + K E + Q
Sbjct: 247 -VLSED---DLRTYYKENAARLAGPEE-RRASHILINAAKDLPAAEREKAKAKAEQLLAQ 301
>gi|169796089|ref|YP_001713882.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter baumannii AYE]
gi|213157178|ref|YP_002319223.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
AB0057]
gi|215483544|ref|YP_002325763.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii
AB307-0294]
gi|301347497|ref|ZP_07228238.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB056]
gi|301511279|ref|ZP_07236516.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB058]
gi|169149016|emb|CAM86893.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Acinetobacter baumannii AYE]
gi|213056338|gb|ACJ41240.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
AB0057]
gi|213987782|gb|ACJ58081.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii
AB307-0294]
Length = 621
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +L++F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G+++E + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQD 154
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 358
>gi|320449245|ref|YP_004201341.1| peptidyl-prolyl cis-trans isomerase, PpiC family [Thermus
scotoductus SA-01]
gi|320149414|gb|ADW20792.1| peptidyl-prolyl cis-trans isomerase, PpiC family [Thermus
scotoductus SA-01]
Length = 605
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 33/315 (10%), Positives = 81/315 (25%), Gaps = 28/315 (8%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKI 75
+ I+ + +NG+ + + D LL+LQ + +
Sbjct: 17 ALAFAVGAILLFTPQAGQQARGKPVLWVNGKAVYELD------LLRLQGNDPLYAANPQG 70
Query: 76 AVQELIV----------ETLKKQEIE-KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ L+ E LK+ + G V+ Q + E F L
Sbjct: 71 LLKTLVDTHFLEQVILTEALKQDAARIRVGSAEVRKEVDRIREQFGLKEKKAYEQF---L 127
Query: 125 DKQGIGDNHFKQYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
++ G D + + Q I + + K E+ + R +
Sbjct: 128 NQVGYTDAQLRSEIKTQLQIQKRLEQIRSAAKPTPEEVRFYFEVHQEDYKGEPRLKARQI 187
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH 243
+ + + A ++ + + + ++ D
Sbjct: 188 VVDEAKLAAELLAKAKAGEDFAALAKQYSKVGAEQGGALGAGPGESEPKPVTKVVFPD-- 245
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHE 301
+ + + P + + + + + K
Sbjct: 246 KVAEAVFAQKGPGLVGPVEAGGRYYLVKVEEYLPAKVPTFEEIKEQVEKDAQAAKGNGAL 305
Query: 302 AEYVKKLRSNAIIHY 316
Y++ LR A + +
Sbjct: 306 EAYLENLRQKAQVRF 320
>gi|260555138|ref|ZP_05827359.1| ppic-type ppiase domain-containing protein [Acinetobacter baumannii
ATCC 19606]
gi|260411680|gb|EEX04977.1| ppic-type ppiase domain-containing protein [Acinetobacter baumannii
ATCC 19606]
Length = 621
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +L++F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G+++E + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQD 154
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 358
>gi|169633493|ref|YP_001707229.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter baumannii SDF]
gi|169152285|emb|CAP01195.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Acinetobacter baumannii]
Length = 621
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +L++F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G+++E + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQD 154
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 358
>gi|219849264|ref|YP_002463697.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aggregans DSM 9485]
gi|219543523|gb|ACL25261.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroflexus
aggregans DSM 9485]
Length = 515
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 17/201 (8%)
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
LS E+F L +Q ++ L + I +V D E
Sbjct: 269 LSKEEFRMALMEQ------YRDRLLNERIQAQLVPEDGFTYSTEPERVTARQILIAVKPP 322
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
E + + Q V + A+ + L + + +
Sbjct: 323 A-EATPEQIEAAFAAALPTAQELVTQLRNGADFAALAAERSDDPGSRDNGGDIGSFDRNG 381
Query: 235 QYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ P+ N ++P TQ G + + ++ + +A +
Sbjct: 382 FADNGATYPPELVAAAFALPVNQISDPVRTQFGWHILEVTNRI-----VPSEADQLQKAR 436
Query: 294 PTKIEKHEAEYVKKLRSNAII 314
+++ ++ + R+ A I
Sbjct: 437 TKALDE----WIAEQRAKADI 453
>gi|46199933|ref|YP_005600.1| hypothetical protein TTC1631 [Thermus thermophilus HB27]
gi|46197560|gb|AAS81973.1| hypothetical conserved protein [Thermus thermophilus HB27]
Length = 608
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 42/311 (13%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN---GELEKIAVQELIV---- 82
+ +NG+ + + D LL+LQ + + ++ L+
Sbjct: 28 FTPQAGQQTRGKPVLWVNGKALYELD------LLRLQGNDPLYAASPEGLLKTLVDTYFL 81
Query: 83 ------ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFK 135
E LK+ + S V + GL + FL++ G D +
Sbjct: 82 EQVILTEALKQDAAR---VRVSSAEVRQEVNRIREQFGLKDKAAYEQFLNQVGYTDAQLR 138
Query: 136 QYLAIQS-IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ Q I + + K E+ K T R ++ +
Sbjct: 139 AEVKTQLQIQKRLEQIRSGAKPTEEEVRFYYEVFKENYRTEPRVKARQIVVDDKALAEEL 198
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK-AQYLLESDLHPQFQNLLKKS 253
+ A +R + + + Q + +++ +
Sbjct: 199 AAKAKAGEDFAALARQHSKVGAEQGGALGAGPGEAEPKPVTQVVFPTEVGEA---VFALK 255
Query: 254 QNNTTNPYVTQKGVEYIAICDK--------RDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
P + + + ++ +A A K Y+
Sbjct: 256 GPGVVGPIAAGGRYYIVKVEEYLPSTLPAFEEVKDRVAQDAER------AKGNGVLEAYL 309
Query: 306 KKLRSNAIIHY 316
++LR A + +
Sbjct: 310 EELRKKAQVRF 320
>gi|89100502|ref|ZP_01173363.1| YacD [Bacillus sp. NRRL B-14911]
gi|89084768|gb|EAR63908.1| YacD [Bacillus sp. NRRL B-14911]
Length = 296
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 41/265 (15%)
Query: 15 LLTTYFVL--IIFCIVPIVSYKSWAMSSRIRTTINGEVITD----GDISKRIALLKLQKI 68
++ + FVL I ++ I +A S + + IT ++ +R
Sbjct: 9 IIASLFVLNIIFILLLTIRPAVLFAGSGETVAEVGKDKITREEWLNEMEQRYG------- 61
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDFSSFLD 125
K + +LI + + EK + + V + L +
Sbjct: 62 -----KEVLNDLIDQKVIGAMAEKYDVEVSKDAVERELTLVKTMYQGNRL--QQLDES-- 112
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
+K+ + + +++ D ++ ++ NK + Y I ++
Sbjct: 113 -------KWKEQIKYSLLLEELLTRDVVVTEEEMKDYYDQNKSLFQVPDS--YHISQIVV 163
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
++ IK+ E + + G E
Sbjct: 164 KTKK-------EAEQTIKELENGSSFPVLAMERSIDEFTANQGGETGFISEEDERFSQDF 216
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYI 270
K + + P + G I
Sbjct: 217 IDEAAKLKEGEWSEPVEVEDGYAVI 241
>gi|42523892|ref|NP_969272.1| hypothetical protein Bd2456 [Bdellovibrio bacteriovorus HD100]
gi|39576099|emb|CAE80265.1| unnamed protein product [Bdellovibrio bacteriovorus HD100]
Length = 345
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 47/331 (14%), Positives = 102/331 (30%), Gaps = 40/331 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M K+ ++ F II V +N +I+ D +
Sbjct: 5 MADKMKRGINAKSVTAMVIFGAIIMVFVFFGMPGQMGAGVGSVARVNNTLISLADFQQEE 64
Query: 61 ALLK-----LQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
++ L + L + A++ L+ L Q +KSGI V F V+
Sbjct: 65 NRIQQYYQNLFGNQMDFGSQRQLLRQQALENLVRMELVSQAAQKSGILATDAEVRDFIVK 124
Query: 109 ---HARNTGLSAEDF-SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ G+ +DF ++++ +F+ + V+ + + +
Sbjct: 125 DIPFFQQNGMFQKDFYMRYIEQTRTTPANFEDKVRKDISN---VRTRALFELATQPTAVE 181
Query: 165 ANK-QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
K Q ++ + + K+ ++ + K+ ++ ++ E
Sbjct: 182 LKKIQDLRAAKINVLFV----------KIDSEAATKALTKEKADAAIKALD-----EALV 226
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY-----IAICDKRDL 278
+ + L + L ++ T+ T+ E + RD
Sbjct: 227 KGDEAAVNAQLKELKATWEETGLVELGSETFPKITSSVATEAVFELSKTEPLLKRLVRDG 286
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ LK S +E AE ++K R
Sbjct: 287 NSKYVLKLKESKVEEVKTLEPMSAEMMQKRR 317
>gi|291614259|ref|YP_003524416.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans
lithotrophicus ES-1]
gi|291584371|gb|ADE12029.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sideroxydans
lithotrophicus ES-1]
Length = 628
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 77/269 (28%), Gaps = 21/269 (7%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQELIVETLK-KQEIEKSGITFDSNTVNYFFVQHA 110
+ D R A+L Q + E I E L E ++ ++
Sbjct: 145 SGFDAEIRQAVLLQQLTESYTQNGYAPESIAEKLIHLNEQQRV---VAIADLDA--AAFV 199
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ LS S + +K F+ Q + + + + + + E+ ++
Sbjct: 200 KQVKLSDGAVSEYYNK---NLQEFQLPERAQVQYVVLSSDSLLSQVKVRDEEVKQYYEEH 256
Query: 171 KN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH- 227
+ T + +L ++P + Q AE+ + + K A +
Sbjct: 257 QADFGTQEQRHAAHILITVPKQA--SDAEKQAARTKAEQILKLVKQSPAKFAALAKQYSQ 314
Query: 228 ----DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G + F++ + ++ T G I + + +I
Sbjct: 315 DPGSASNGGDLGEFGRGAMVKPFEDSVFSLKVGQVSDLVQTDFGYHIIKLIAVKP--AKI 372
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
A + + + +L
Sbjct: 373 QALAEVRDMIIQQLKLQRANDMFAELAEK 401
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 51/141 (36%), Gaps = 17/141 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISKRIALLKLQKINGEL 72
+ +++ F + SY++ + + T+NGE I + D + +++++ G
Sbjct: 13 QIVLALIILPFAFWGVTSYRN-SSGTAPLATVNGEKIGQQEFDSAMNQQQQRVREMAGAN 71
Query: 73 EKIA-----------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAE 118
A + L+ + L E +K G++ V V + +
Sbjct: 72 FDPAFFDKPEIKFSLLDRLVTQHLMAMEAKKVGLSITDEQVGQIIVNIGAFQQDGRFDRQ 131
Query: 119 DFSSFLDKQGIGDNHFKQYLA 139
+ + L +G + F +
Sbjct: 132 RYEAVLRDKGKTPSGFDAEIR 152
>gi|49473855|ref|YP_031897.1| peptidyl-prolyl cis-trans isomerase [Bartonella quintana str.
Toulouse]
gi|49239358|emb|CAF25691.1| Peptidyl-prolyl cis-trans isomerase [Bartonella quintana str.
Toulouse]
Length = 317
Score = 44.6 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 83/286 (29%), Gaps = 56/286 (19%)
Query: 40 SRIRTTINGEVITDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSGIT 96
S + I+G+ IT G + + + ++ + + ++ + + + GI
Sbjct: 49 SHVMAVIDGKEITAGQLDELALEINPNLVRFPDEQRRITVLKAYLDMQVLAKAAISKGID 108
Query: 97 FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+ + + ++ L +FKQ + Q
Sbjct: 109 KTEA--------YDKRMAVMRDNVLQQL--------YFKQMIVDQI-------------- 138
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ ++E NK+ E R +L + KR+ E K+
Sbjct: 139 SDTDLETLYNKEVAALPKEDEVKARHILVKTKK----EAEAIIKRLSKGESFEAVAKKNS 194
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVEYIAICD 274
G Y + F++ T P + G I + D
Sbjct: 195 TDG-------SAAVGGDLGYFSHGQMVKPFEDAAFGLKVGEYTKKPVESPFGWHVIKVED 247
Query: 275 KR----DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R + ++ K L Q + + + + LR+ + Y
Sbjct: 248 RRLKQPPIFDDV--KEMLRTQLIKERYQ----KLIVDLRNTIDVKY 287
>gi|94969792|ref|YP_591840.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Koribacter versatilis Ellin345]
gi|94551842|gb|ABF41766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Koribacter versatilis Ellin345]
Length = 654
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 30/156 (19%)
Query: 44 TTINGEVITDGDISKRIA-LLKLQKINGE----LEKIAVQELIVETLKKQEIEKSGITFD 98
++GE IT D SK + + Q+ + L AV+ LI + E + G+
Sbjct: 52 AKVDGEAITAADASKAAQNMAQQQRYPAQFVPFLMPQAVEMLIKQKAVLDEAHRMGLNVS 111
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQG--IGDNHFKQYLAIQSIWP----------- 145
+ L F L +G +GD+ ++ ++ Q
Sbjct: 112 DEEL---------RAVLHKGQFGEILFPKGNYVGDDAYQNFVQSQFSMTVPQFELELKKS 162
Query: 146 ---DVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
++ + +I ++ + +Y
Sbjct: 163 IEIQKLRGVVEASATVADADIDNLVRQQQTKVKFDY 198
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 77/253 (30%), Gaps = 21/253 (8%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD----------- 131
E K + + ++ T ++ Q S ++GI
Sbjct: 164 EIQKLRGVVEASATVADADIDNLVRQQQTKVKFDYASLSLADIEKGINPSDAEMKAWYEA 223
Query: 132 --NHFKQYL--AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREY-LIRTVLF 185
+ FK L + + V+ + + + +I K T+ + ++ +L
Sbjct: 224 HKDQFKDSLPEKRKIKYVSVIGSK-LPGVQPSDADIQKYYNDHKTEFTIPQTATVQHILV 282
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+P K + + R + +L K S + + +L +
Sbjct: 283 MVPQGADAKTDAAAKAKAEDYLKQARGGANFGELAKKYSDDKGTGDSTLEVTPQGNLVKE 342
Query: 246 FQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEA 302
F++ L + P TQ G I I G +K+ ++ K
Sbjct: 343 FKDASLAGKTGDILGPVKTQFGYHIIKIQKNEPAGARSLDEVKSQIAIVMGGQKAADAAQ 402
Query: 303 EYVKKLRSNAIIH 315
+ LR++A +
Sbjct: 403 KAADNLRNSARVQ 415
>gi|187928946|ref|YP_001899433.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12J]
gi|187725836|gb|ACD27001.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12J]
Length = 646
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 45/400 (11%), Positives = 110/400 (27%), Gaps = 106/400 (26%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKL 65
+ L+ V F + SY S+ SS ++G+VI+ ++ R+ L ++
Sbjct: 10 RLMFLVLLILVFPSFVFFGVQSYSSFMDSSHDAAKVDGKVISTNEVDARVREQTERLRQM 69
Query: 66 QKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTV--------------- 102
+ + + +I + + E+ ++ +T + +
Sbjct: 70 LGAQYDPRQFEGPQMRRDVLDGIIQQRVLANEVVRANLTISNEKIRDTILQIPAVAALRK 129
Query: 103 ------NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
+V+ ++ E L + + ++ + +V+ ++
Sbjct: 130 PDGSFDQEAYVRLLSAQNMTPEQLEGNLRFELSQQQIPQSIVSSAFVPKSLVERLIQVRD 189
Query: 157 GNLEMEI--------PANKQKMKNITVREYLIRTVLFSIPDNKLQN-------------Q 195
E++ A Y FS+P+
Sbjct: 190 QQREVQTLLFKPADYAAKVNADDKAIQAYYDAHQQEFSVPEQVKAEYVVFSGEEMMKQIP 249
Query: 196 GFVQKRIKDAEESRLRL-----------------------------------------PK 214
++ + +++ R P
Sbjct: 250 VTPEQIKEYYDQNAARFKTQEERRAAHILIKLPDNAKPADKEAAKKKAEEVLAEVRKNPA 309
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYI 270
+L K S + G+ +L + P F+N L K + ++ + G I
Sbjct: 310 SFAELAKKYSGDPGSAAQGGELGFLGKGATVPPFENALFALKQPGDISDVVQSDFGFHII 369
Query: 271 AICDKRDLG------GEIALKAYLSAQNTPTKIEKHEAEY 304
+ + + G + L+ L Q K + +
Sbjct: 370 KLEEVKGGGVQPLEAVKPELERELRTQLANKKYSELADAF 409
>gi|325662683|ref|ZP_08151280.1| hypothetical protein HMPREF0490_02020 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471022|gb|EGC74249.1| hypothetical protein HMPREF0490_02020 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 246
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 93/288 (32%), Gaps = 60/288 (20%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-------EKIAVQELIVETLKKQEI 90
MS+ + + G+ IT+ ++ A L+ + + +++LI L Q
Sbjct: 1 MSNEVLAVVAGKEITNAELD---AFLQNAPREQQAYVTNPQFRQQYLEQLISLHLFAQAG 57
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
E + + E+F+ L+ K+ + Q + +K
Sbjct: 58 EDAKLE-------------------ETEEFAKILENA-------KRDILAQLAMRETLK- 90
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ + E+ + K + + +L D++ + ++ +
Sbjct: 91 --DVTVTDEEVAAYYEENKQQFTKGETVSAKHILV---DSEEKCTSVLESITSGEKAFE- 144
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEY 269
+ ++ ++ G + + +F+ ++ + P TQ G
Sbjct: 145 ------DAAKEASTCPSGARGGDLGEFGKGQMVKEFEEAAFAAEIGHVVGPVKTQFGYHL 198
Query: 270 IAICDKRDLGG-------EIALKAYLSAQN---TPTKIEKHEAEYVKK 307
I + K + E + + + K+++ + +Y++K
Sbjct: 199 IKVEKKNEASVAAFDEVKEAIKRNLIQQKQNAAYNAKVQELKEKYLQK 246
>gi|167581584|ref|ZP_02374458.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia
thailandensis TXDOH]
Length = 644
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 79/238 (33%), Gaps = 37/238 (15%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + S +NG IT + D R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGMLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G + + + LI + E ++ +T V +
Sbjct: 69 MLGAQFDAKAFDTPQRRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLSDPVVASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KADGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELA 188
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+Q+ ++ ++ D + Q + + + ++
Sbjct: 189 EQQRE---------VQQMMLKSADYATKVQPTDAQISAYYDAHKQAFATREAATIQYL 237
>gi|312900280|ref|ZP_07759592.1| putative foldase protein PrsA [Enterococcus faecalis TX0470]
gi|311292641|gb|EFQ71197.1| putative foldase protein PrsA [Enterococcus faecalis TX0470]
Length = 342
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IFKVFE-EKYGDKVTDKDIQKSFDEAKEQVEAQGGKFSDALKQAGLTEKAFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|254183780|ref|ZP_04890372.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
1655]
gi|184214313|gb|EDU11356.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
1655]
Length = 240
Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIP-ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + ++P +A+ RL
Sbjct: 87 FFSAVSVDEDDIGTAYARIKSKLGTTEYLLS--ILTVPG--------------EADALRL 130
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 131 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 190
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 191 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 233
>gi|332187280|ref|ZP_08389019.1| hypothetical protein SUS17_2464 [Sphingomonas sp. S17]
gi|332012701|gb|EGI54767.1| hypothetical protein SUS17_2464 [Sphingomonas sp. S17]
Length = 296
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIALL---K 64
S + ++ LII + + ++ T+NG I D+ +++ L
Sbjct: 23 SLILYAISAVLGLIIAGYGLFTAQGTRVGGIAPENAATVNGAPILRADLIQQVGSLYSIS 82
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ + + A+ ++I E L Q + G+ D V V A + ++ + +
Sbjct: 83 FAQASAAQRRKALDDMIREELHVQRGIEVGLPADDIDVRAALVG-ATDAQVAQDTLTE 139
>gi|328953890|ref|YP_004371224.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobacca
acetoxidans DSM 11109]
gi|328454214|gb|AEB10043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfobacca
acetoxidans DSM 11109]
Length = 629
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQG 128
L + A+ ++I E L KQ + G+ + + + A G + + + L ++
Sbjct: 83 LREQALGQMIDELLIKQASNRLGLNVTDAELRDYIRRNPAFADERGFNEKRYHQLLARRR 142
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ + +++ Q + +V E ++ + + EY++
Sbjct: 143 LPASEYEEQERQQLLVQKMVHF-ITSFAKISEADLQEAYRLQQETVRVEYVV 193
>gi|196232957|ref|ZP_03131806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter
flavus Ellin428]
gi|196222935|gb|EDY17456.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chthoniobacter
flavus Ellin428]
Length = 136
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Query: 210 LRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
++ +D KL + S+ G + + + P+F N + ++P + G
Sbjct: 1 MKKGEDFGKLAQEISEDPSAKENKGDLDFFRKEAMVPEFSNAAFGMKKGEISDPVRSDFG 60
Query: 267 VEYIAICDKRDLGGEIALKAYLS--AQNTPTKIEKHEAEYVKKLRSNAII 314
I + D++D KA A K + E +K +R A +
Sbjct: 61 FHVIKVTDRKDAETVTLEKAKPQLLAFLKNQKKQAAVEEVIKGVREKAEV 110
>gi|94968589|ref|YP_590637.1| trigger factor [Candidatus Koribacter versatilis Ellin345]
gi|118574057|sp|Q1IRD7|TIG_ACIBL RecName: Full=Trigger factor; Short=TF
gi|94550639|gb|ABF40563.1| trigger factor [Candidatus Koribacter versatilis Ellin345]
Length = 437
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
K++ KL++ + A +E+ L ++ + I ++ AR + S
Sbjct: 347 KKMDFGKLREGQ---REAATREVKASLLLEKIADAEKIEVSDEELDRQIAGLARQSQQSP 403
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQ 141
E + L + G + + + +
Sbjct: 404 EQVRARLTQDG-SLDRIRTQIRNE 426
>gi|309807374|ref|ZP_07701339.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 01V1-a]
gi|309810061|ref|ZP_07703907.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN
2503V10-D]
gi|312872215|ref|ZP_07732288.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
2062A-h1]
gi|312873587|ref|ZP_07733634.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
2052A-d]
gi|308169383|gb|EFO71436.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 01V1-a]
gi|308169560|gb|EFO71607.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners SPIN
2503V10-D]
gi|311090840|gb|EFQ49237.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
2052A-d]
gi|311092299|gb|EFQ50670.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners LEAF
2062A-h1]
Length = 297
Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 88/307 (28%), Gaps = 37/307 (12%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F K L T ++ F V + + S+ G IT D K +
Sbjct: 3 FKKSLKTLLLIAAFSGVALTATGC----SKTVANYKGGKITQED------FYNKVKKSPA 52
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ I +I TL++Q G VN + + G F L + G+
Sbjct: 53 GQAILANMIINRTLQQQ----YGSQVSKKKVNTAYDNARKQYG---ARFEMVLQQNGMTP 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+K+ + + +++ A ++K + ++ +L
Sbjct: 106 EAYKESIQTNLL--------LQAALKDIKPITKAQEKKAWKEYQPKVRVQHILV------ 151
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
+ K++ + K + + ++ L F+
Sbjct: 152 --EKEDTAKKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKEAAF 209
Query: 251 KKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKK 307
K T P TQ G I + G + K+ + + + + +
Sbjct: 210 KLKTGEYTKKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIITRIYQKMAQDQNVIKSVLGV 269
Query: 308 LRSNAII 314
+ A +
Sbjct: 270 VLKRANV 276
>gi|260550156|ref|ZP_05824370.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624]
gi|260406911|gb|EEX00390.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624]
Length = 621
Score = 44.3 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +LI+F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGINGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G++++ + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSQALIASLRQD 154
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 37/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + V+ I +++ + ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKNAKRVVKHILITTDARDDAAAQKLANEVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVSSLKNGQVSQPVKTQYGYHIIE 358
>gi|319648995|ref|ZP_08003204.1| hypothetical protein HMPREF1012_04243 [Bacillus sp. BT1B_CT2]
gi|317388989|gb|EFV69807.1| hypothetical protein HMPREF1012_04243 [Bacillus sp. BT1B_CT2]
Length = 255
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIVETLKKQ 88
++ +N E IT D + ++ ++Q +++K A+ LI + L Q
Sbjct: 64 TKTVAVVNDEKITGKDYNSVLSTAQMQYQQTGQDPTSKDAAQQIKKQAIDSLIGQALITQ 123
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
E +K G + + + + +DF + K G+ N K +A
Sbjct: 124 EADKKGYKASEKEIEKQLDESKKQYK-NEQDFEEAVKKAGLNMNTLKSDIA 173
>gi|91775766|ref|YP_545522.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus
flagellatus KT]
gi|91709753|gb|ABE49681.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacillus
flagellatus KT]
Length = 626
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 46/394 (11%), Positives = 103/394 (26%), Gaps = 102/394 (25%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING 70
++ + + I F +V + SY A SS ++GE IT + S + L+ + +
Sbjct: 11 GWLAKVILAAITIPFALVGVDSYLRDAGSSVAVAKVDGESITVQEYSNALQNLRNRLQSE 70
Query: 71 -----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV----------------- 102
EL++ + L+ L E++++ +
Sbjct: 71 GKVDQAVIDGPELKQAVIDHLVEGRLLANEVKRAKFVVSDEQLSHYIMQEESFHQDGQFS 130
Query: 103 NYFFVQHARNTGLSAEDFSS------------------FLDKQGIGDNHFK-QYLAIQSI 143
+ Q + F + G+ +N K + + +
Sbjct: 131 QALYDQFLAERRRTPSQFENEVRTDLLTMQAREGLSALAFVPNGVANNAIKVAHQSREVS 190
Query: 144 WPDVVKNDFMLKYGNLEMEIPA----------------------------NKQKMKNITV 175
+ D++ + E E+ A Q++
Sbjct: 191 IAEFRTADYLSQVKVTEDEVNAYYKEHQDKFKVPEQVKLEFVLLSANALIPSQQVTEEEA 250
Query: 176 REYLIR--------------TVLFSIPDNKLQNQGFVQKRIKDAE-ESRLRLPKDCNKLE 220
REY + +L + K + + P+ +L
Sbjct: 251 REYYAQNAAQFQGDEQRRASHILIGFGVSPTPETKQKAKEKAEEVLALVKKNPERFEQLA 310
Query: 221 KFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDK-- 275
S+ G + F++ + ++ T G I + +
Sbjct: 311 HQYSQDPGSKDKGGDLGLFGPGTMVKPFEDAVFSMKPGTISDLVETDFGYHIIKLTEIHG 370
Query: 276 -----RDLGGEIALKAYLSAQN--TPTKIEKHEA 302
D+ G+I + + E
Sbjct: 371 SGQSFEDVQGQIRAELMYQKALAQFSEQAENFSN 404
>gi|167836273|ref|ZP_02463156.1| putative peptidyl-prolyl cis-trans isomerse D [Burkholderia
thailandensis MSMB43]
Length = 644
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 33/238 (13%), Positives = 79/238 (33%), Gaps = 37/238 (15%)
Query: 14 KLLTTYFVLIIFC----IVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ L +F+L+I IV I ++ + + +NG IT + D R + + ++
Sbjct: 9 QRLMMFFLLLIVLPGLGIVGIQGFRGFFDENANVAAVNGHKITRAEFDGMLRQQVDQARQ 68
Query: 68 ING-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHA 110
+ G E + + LI + E ++ +T V +
Sbjct: 69 MLGAQFDAKAFDTPERRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLSDPVIASLK 128
Query: 111 RNTG-LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPA 165
+ G AE ++ L QG+ + +++ + +V + F K + A
Sbjct: 129 KPDGSFDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVASAFTPKSIARRLTELA 188
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+Q+ ++ ++ D + Q + + + ++
Sbjct: 189 EQQRE---------VQPMVLKPADYAAKVQPTDAQISAYYDAHKQAFATRETATIQYL 237
>gi|116624599|ref|YP_826755.1| DSBA oxidoreductase [Candidatus Solibacter usitatus Ellin6076]
gi|116227761|gb|ABJ86470.1| DSBA oxidoreductase [Candidatus Solibacter usitatus Ellin6076]
Length = 340
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 43 RTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+NG I +I ++ L +LQ+ L K + +I + L + E + G+
Sbjct: 30 AAMVNGAPILASEIDAKLGNDLAQLQQQIFNLRKKQLNTVIDQKLLEDESARRGVMIAE 88
>gi|20806943|ref|NP_622114.1| hypothetical protein TTE0434 [Thermoanaerobacter tengcongensis MB4]
gi|20515421|gb|AAM23718.1| hypothetical protein TTE0434 [Thermoanaerobacter tengcongensis MB4]
Length = 241
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 42 IRTTINGEVITDGDISKRIAL-LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +NG I + R L L + ++ + +L+ E +K+ K + +
Sbjct: 66 IIAEVNGIPIYKNEFELRKGLTLASDEQINDINNFVLNKLVREKVKEYLAMKYNLKVSED 125
Query: 101 TVNYFFVQHARNTGLSAED---FSSFLDKQGIGDNHF 134
+N + + + E + G+ +
Sbjct: 126 EINSYIEKEKQQFKEFPEAEKKLKELISASGMTYEEY 162
>gi|268592032|ref|ZP_06126253.1| peptidyl-prolyl cis-trans isomerase D [Providencia rettgeri DSM
1131]
gi|291312424|gb|EFE52877.1| peptidyl-prolyl cis-trans isomerase D [Providencia rettgeri DSM
1131]
Length = 651
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 59/189 (31%), Gaps = 24/189 (12%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKINGE-----------LEKIAVQELIVETLK 86
+NG+ I+ + + R +L + L + A+ LI L
Sbjct: 71 AAEVNGQSISREQLQQAFQQERQSLQEYLGDKFSEVASNEESMNLLRRQALDNLINNELI 130
Query: 87 KQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
Q + ++ + + +E + L + I + +
Sbjct: 131 NQYANELQLSASDQQIEQYIFSMPVFQTDGRFDSEKYREILSRNNINADSLAAQIR---- 186
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
D+ + + + +P+ + + ++E IRT + + + + + ++
Sbjct: 187 -QDLTRAQLGKTFTGTDFALPSEVKAYAELFMQEREIRTAILDLAEVQAKQTASEEELKA 245
Query: 204 DAEESRLRL 212
+ ++
Sbjct: 246 YYDANQNSF 254
>gi|323498280|ref|ZP_08103282.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sinaloensis DSM
21326]
gi|323316708|gb|EGA69717.1| peptidyl-prolyl cis-trans isomerase D [Vibrio sinaloensis DSM
21326]
Length = 619
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 33/314 (10%), Positives = 80/314 (25%), Gaps = 74/314 (23%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NTGLSAED--FSSFLDKQGI 129
K + ++ + L +Q E G+ V V+ + + + + L + G
Sbjct: 88 RKSVLDRMVNDLLIEQHAETLGLRVSDAQVRTMIVEMPQFQADGKFDQDIYQASLRRAGF 147
Query: 130 GDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLKY 156
F +YL + ++ DF K
Sbjct: 148 TPESFAEYLRRDLVRNQLLTAIQASDFSLAAEVEAQAKLLTQTREVETLTLPLSDFAAKV 207
Query: 157 GNLEMEIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP- 213
E +I A + + + + + + K ++ K +E +
Sbjct: 208 KLSEEDIQAYYEQNPQRYTRPEQVKVAYIELAAQQLKDAITISEEQAKKYYDEHLDKYSS 267
Query: 214 -------------KDCNKLEKFASKIHDVS------------------IGKAQYLLESDL 242
D K + +++ + G ++ +
Sbjct: 268 EEQRRVSHILVEGDDQAKAQAILDELNAGADFATLAEEKSDDFGSASEGGSLGWIERDVM 327
Query: 243 HPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIE 298
P F+ + T + G I + + + + + A + + +
Sbjct: 328 DPAFEEAAFGLNNVGEVTELVKSDFGYHIIKLDELKASVAKPYTEVAAEIKQELKDQQAI 387
Query: 299 KHEAEYVKKLRSNA 312
E +L A
Sbjct: 388 DQFYELQSELEKVA 401
>gi|255021292|ref|ZP_05293340.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus
ATCC 51756]
gi|254969155|gb|EET26669.1| Peptidyl-prolyl cis-trans isomerase ppiD [Acidithiobacillus caldus
ATCC 51756]
Length = 516
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 25/162 (15%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMS---------SRIRTTINGEVITDGDISKR-- 59
D + L+ + I V +S+ W +S ++ ++G+ I+ +R
Sbjct: 3 DAFRKLSQSWAAKIVLAVIALSFVLWGVSGYLFSNDSGEQVVAKVDGDKISAAIFQQRLH 62
Query: 60 -IALLKLQKINGELEKI----------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
Q E + LI L E K G+ + +
Sbjct: 63 DAREHYAQVFGPEAAAQMAKDPSFAPDVLNGLIDNLLLAHEARKLGLQVPDSALAQKIEG 122
Query: 109 ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
A S + L G+ F+ L + +
Sbjct: 123 ISAFADKGKFSRAKYQEVLRANGLTPVKFEAMLRDSMLLEQL 164
>gi|281421755|ref|ZP_06252754.1| chaperone SurA [Prevotella copri DSM 18205]
gi|281404250|gb|EFB34930.1| chaperone SurA [Prevotella copri DSM 18205]
Length = 328
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 6/137 (4%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQ 235
+ +L + + V +R D+ L D L K S K V+ G
Sbjct: 106 VHVAHILLRLGQKASYREQEVVERRIDSIYQALCKGADFADLAKKCSDDKGSAVNGGTLA 165
Query: 236 YLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSA-Q 291
+ + F+ + + + P++++ G + + DK D G + A + +
Sbjct: 166 WFTKGQTVQAFEKVAFSLRKGEISRPFMSEFGYHIVKLLDKHDDGNQKKYVADAKVENWR 225
Query: 292 NTPTKIEKHEAEYVKKL 308
T + E+ E + ++
Sbjct: 226 GTYQQQEEVENLLLNEI 242
>gi|169825702|ref|YP_001695860.1| hypothetical protein Bsph_0092 [Lysinibacillus sphaericus C3-41]
gi|168990190|gb|ACA37730.1| Hypothetical yacD protein [Lysinibacillus sphaericus C3-41]
Length = 323
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 90/261 (34%), Gaps = 38/261 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRI-----RTTINGEVITDGDISKRIALLKLQKING 70
L VL++ I+ + + I I+G+VIT ++ ++ +++ G
Sbjct: 31 LAVIAVLLLGNILWFIGWVIPNKGQEIGSDEQVAAIDGDVIT-----RQEWMIAMEERYG 85
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
K +Q L+ ET+ ++ + I ++ + + F + + Q +
Sbjct: 86 ---KETLQSLVNETVMEKAAKTYKIKVTDQEIDLELALM----RSAQDKFDTAM--QNLT 136
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+Q + Q I V+ D ++ ++E N+ T Y +
Sbjct: 137 AEQLRQKIRSQLILDKVLTKDVVINEESIEKYYEENQGLYN--TKTSYRTNFI------- 187
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLE--SDLHPQF 246
K+ D L+ D + L + S G +L E ++ P
Sbjct: 188 -----EVDAKKAADEALGELKNGSDFSVLAREISLDSASASLGGDVGFLTENQENVDPAI 242
Query: 247 QNLLKKSQ-NNTTNPYVTQKG 266
N +K ++ N + + G
Sbjct: 243 INAVKSTKVNEVSKAFKLDNG 263
>gi|116334085|ref|YP_795612.1| peptidylprolyl isomerase [Lactobacillus brevis ATCC 367]
gi|122269231|sp|Q03QE1|PRSA_LACBA RecName: Full=Foldase protein prsA; Flags: Precursor
gi|116099432|gb|ABJ64581.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus brevis ATCC
367]
Length = 305
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 83/256 (32%), Gaps = 39/256 (15%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVE 83
I +++ S+ T NG IT+ + +L L+++ + +++
Sbjct: 6 IALAGLLLTVTLAGCGSQTVATTNGGKITES--AYYSSLKGTSSGKQVLQQMILNKVLE- 62
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
++ G + V F ++ G S SS L + G+ + K + +
Sbjct: 63 -------KQYGDKVSKSAVTKQFDKYKSQYGSSF---SSVLSQSGMTQSSLKTEIRSNLL 112
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ VK++ + A +K E + +L + Q IK
Sbjct: 113 LKEAVKDNVTVT--------DAQLKKQFKSYEPEVSVAHILV-------SKKSTAQTIIK 157
Query: 204 DAEESRLRLPKDCNKLEKFASKIH-DVSIGKAQYLLE------SDLHPQFQN-LLKKSQN 255
D + ++ ++ K A K D + L + L F+ K
Sbjct: 158 DLKSTKS--SDMTSEFTKLAKKYSTDTATKNKGGKLSSFDSTDTSLDSTFKKAAFKLKTG 215
Query: 256 NTTN-PYVTQKGVEYI 270
T P TQ G I
Sbjct: 216 EYTATPVKTQYGYHVI 231
>gi|52078715|ref|YP_077506.1| putative lytic transglycosylase YomI [Bacillus licheniformis ATCC
14580]
gi|52784085|ref|YP_089914.1| hypothetical protein BLi00261 [Bacillus licheniformis ATCC 14580]
gi|52001926|gb|AAU21868.1| putative lytic transglycosylase YomI [Bacillus licheniformis ATCC
14580]
gi|52346587|gb|AAU39221.1| hypothetical protein BLi00261 [Bacillus licheniformis ATCC 14580]
Length = 255
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN-----------GELEKIAVQELIVETLKKQ 88
++ +N E IT D + ++ ++Q +++K A+ LI + L Q
Sbjct: 64 TKTVAVVNDEKITGKDYNSVLSTAQMQYQQTGQDPTSKDAAQQIKKQAIDSLIGQALITQ 123
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
E +K G + + + + +DF + K G+ N K +A
Sbjct: 124 EADKKGYKASEKEIEKQLDESKKQYK-NEQDFEEAVKKAGLNMNTLKSDIA 173
>gi|313672156|ref|YP_004050267.1| ppic-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938912|gb|ADR18104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 623
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 80/224 (35%), Gaps = 15/224 (6%)
Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVE-TLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+ DI + L K++ + + QE++ E ++ + +E S I F + +
Sbjct: 146 ENDIRVNLLLNKMKGVIATSVYVNDQEILKEYRMRNKAVEISYIKVSPED----FEKDVK 201
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQK 169
S E + +L+ N F + + + + ++ + E E+ + K K
Sbjct: 202 VDDKSLEKY--YLE----NKNEFLEPTKAKLKYVEFAPDNVKIDDNISEQELQSYYLKNK 255
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK-LEKFASKIHD 228
+ + R +L I + + + + + + + ++++ I
Sbjct: 256 EQFKQDEQIKARHILIKIDNFQDNVSVEKALKKAEEIYKKAKSGAKFEELAKQYSDDISK 315
Query: 229 VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271
+ G ++ + +F++ L + + P T G I
Sbjct: 316 NNGGDLGFVKRGMMIKEFEDALFSLKEGEISKPVKTSFGYHIIK 359
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 30/110 (27%), Gaps = 4/110 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQG 128
L K ++E+I + L E + + V + N + L
Sbjct: 80 LSKQVIEEIISKYLLLDEANRLKLPVTDAEVLAEIKKVPAFQVNGQFDKNRYLEVLRLNQ 139
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
I F+ + + + +K + EI + Y
Sbjct: 140 ITPETFENDIRVNLLLNK-MKGVIATSVYVNDQEILKEYRMRNKAVEISY 188
>gi|300779152|ref|ZP_07089010.1| peptidyl-prolyl cis-trans isomerase [Chryseobacterium gleum ATCC
35910]
gi|300504662|gb|EFK35802.1| peptidyl-prolyl cis-trans isomerase [Chryseobacterium gleum ATCC
35910]
Length = 455
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 24/306 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
I L F++I + K + I I E++ + D+ +++ K Q
Sbjct: 7 ITFLLGIFIMIFSSNMMNAQLKQGDLVDGIAAVIGDEIVLESDVIEQMNYGKQQGAANTD 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ ++ LI L E +K + S +
Sbjct: 67 KCEFLENLISNKLLVYEAKK------DTLIENRSAAIKEQANAKYRQLLSQFPDEKTLLA 120
Query: 133 HFKQYLAIQS-------------IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
+K A + + E+ N K + V++ +
Sbjct: 121 AYKFRNAYEMKNAIEKIDTDQYYGQAKYQRVTDKADVTPNEVTDFYNMYKTQLPQVKDEV 180
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+ P ++ + R+K ++ L ++ ++ + G +
Sbjct: 181 TLAQIMIYPSLTEAHKQDLINRLKKIKQDILAGETFESQARIYSEDEGSAANGGLYKNIN 240
Query: 240 --SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI 297
+ P L +N ++P ++ G I + + G++ ++ + TPT
Sbjct: 241 KGQMVKPFEAAALNLQENEISDPVESEFGFHIIQLVKR---SGKVYDARHILLKATPTDE 297
Query: 298 EKHEAE 303
E A+
Sbjct: 298 EIKTAK 303
>gi|297205678|ref|ZP_06923074.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus jensenii JV-V16]
gi|297150256|gb|EFH30553.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus jensenii JV-V16]
Length = 319
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 70/238 (29%), Gaps = 33/238 (13%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ L + + ++ G V+ + + + G S F S L++ G
Sbjct: 66 SSQAGKSTLANMIIYRALKQQYGKKVSQKQVDKEYNAYKKQYGSS---FESALEQNGYTT 122
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ FK+ + + + +++ +QK + ++ +L
Sbjct: 123 SSFKKNIETNLL--------TVAALKDIKKITSKQEQKAWKSYQPKVTVQHIL------- 167
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQ 245
+K + +L+ L K S D + L + L
Sbjct: 168 -----VSKKSTAEDIIKQLKSGTSFATLAKKYST--DSATKDKGGKLAAFDSTDTTLDSD 220
Query: 246 FQNL-LKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
F+ K TT P TQ G E I + G K + Q + +
Sbjct: 221 FKTAAFKLKTGEYTTTPVKTQSGYEIIKMIKHPSKGKFSDHKKEIDEQIYQSMEQDTA 278
>gi|170698305|ref|ZP_02889381.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria IOP40-10]
gi|170136796|gb|EDT05048.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria IOP40-10]
Length = 282
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 94/320 (29%), Gaps = 60/320 (18%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
F ++L + + +S ++ + T+NG ITD +++ A+L+ K
Sbjct: 5 FNRILIATAIAWQMALPVQAQAQSASLPAGSVATVNGTPITDAEVN---AVLQASKQPDT 61
Query: 72 L--EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ +LI L +Q EK+ D V N
Sbjct: 62 PQIRQAIKNQLIARVLIQQAAEKAKYG-DKPEVQAAMQAAKANAE---AQL--------- 108
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ K + + VK + G+L E ++ + + D
Sbjct: 109 ---YLKDNIKPAPVTDAQVKARYDEIVGSLGKE----------------EVKPRIIVVKD 149
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL---------ES 240
Q + ++ R +++ + G+ ++
Sbjct: 150 AATAATVLAQLKAGQTFDALAR---------QYSQAPSAGAGGELPWVSFKMPLVEGNTQ 200
Query: 241 DLH-PQFQNLLKKSQNNTTNPYVT--QKGVEYIAICDKR--DLGGEIALKAYLSAQNTPT 295
L P Q + K T ++ + I KR + ++ + Q
Sbjct: 201 GLPLPVAQAMTKLPAGGVTADFIPLGNGARAIVKIDAKRPTQVPAYDTAQSTIRQQLQAL 260
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
EK AE V L +A I
Sbjct: 261 AFEKATAELVGGLLKDAKIQ 280
>gi|163867494|ref|YP_001608693.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
gi|161017140|emb|CAK00698.1| peptidyl-prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
Length = 317
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 15/162 (9%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
A K+ + + + + + +++++ + + K K+AE L K E+ A
Sbjct: 132 QAIVDKISDTDLEDLYKQEIAALPKEDEVKARHILVKTRKEAEAIIKHLNKG-ENFEEIA 190
Query: 224 SKIH----DVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAICDKR- 276
K G Y + F++ T P + G I + D+R
Sbjct: 191 KKSSTDGSAAVGGDLGYFSHGQMVKPFEDAAFGLKVGEYTKQPVESPFGWHIIKLEDRRV 250
Query: 277 --DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + L Q + ++ + LRS + Y
Sbjct: 251 KQPPTFDEVKEM-LRTQLIKKRYQEL----IVDLRSKIDVKY 287
>gi|241759275|ref|ZP_04757381.1| conserved hypothetical protein [Neisseria flavescens SK114]
gi|241320411|gb|EER56708.1| conserved hypothetical protein [Neisseria flavescens SK114]
Length = 289
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 102/306 (33%), Gaps = 42/306 (13%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----ELEKIAVQEL 80
F +++ S + ++ T+NG+ I I ++A ++ N EL ++ +
Sbjct: 6 FASALMLALTSGTLFAQTLVTVNGQAIDSSVIDDQVASVRASNPNVQDTPELRQMLTERQ 65
Query: 81 IVETLKKQEIEKSGITFDSN---TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
I+ T+ QE +K + + + A+ F + F+
Sbjct: 66 IISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAV-------FEND 118
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
L Q+ +V+ +Y E ++ A N +E + ++ +
Sbjct: 119 LLGQAFAAHIVR-----QYPVQEKDVKAAYNDFSNFYKGTQEVQLGEIV--------TDS 165
Query: 196 GFVQKRIKDAEESRLRLPK----DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
QK I D + + + ++ K A I I L+ P + +
Sbjct: 166 SNAQKAIADLDAKKSFVSVLNQYSIDEAAKKAGGIPKAYI--PLKDLQESAPPLYAAVKD 223
Query: 252 KSQN-NTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ +T P + D+R++ A K + + +++ ++ L
Sbjct: 224 LKKGAHTKTPLQNGNLYAVFYVNDRRNVTVPSYEAAKNEIGSDLQAARVDAA----IQSL 279
Query: 309 RSNAII 314
A I
Sbjct: 280 LKKASI 285
>gi|329120541|ref|ZP_08249205.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Neisseria
bacilliformis ATCC BAA-1200]
gi|327461280|gb|EGF07612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Neisseria
bacilliformis ATCC BAA-1200]
Length = 290
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 98/305 (32%), Gaps = 45/305 (14%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET--- 84
+++ S +++++ T+NG I ++ + + L+ Q EL+ +
Sbjct: 9 ALVLAVLSGSLAAQTLVTVNGSKIDSSEVDRYVKALRAQNPQVPDSPEIRSELLGDIVTR 68
Query: 85 -LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ QE + + + A A K G FKQ
Sbjct: 69 TIVVQEARRLKLDQGKE------YKAAIENARKAAQKEGADKKPG-----FKQQ------ 111
Query: 144 W----PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
W +++ F+ + A +K Y +++Q +
Sbjct: 112 WEDYQNELLNQAFVAHIVRTQPVSDAEARKNYEEMQNFYK--------GSSEVQIGEILT 163
Query: 200 KRIKDAEESR--LRLPKDCNKLEKFASKIHDV--SIG-----KAQYLLESDLHPQFQNLL 250
++ DAE++ L+ K + + S V + G LE+ P + +
Sbjct: 164 QKKDDAEKAIKDLKANKPFVETARKYSADPQVKQTGGINKEYDPLKDLEAAAPPVYNAVK 223
Query: 251 KKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ TT P I DKR + I + A T + +++ + + L
Sbjct: 224 DLKKGQFTTTPVEGNGAYGVFYINDKRSVQ--IPAFEQIKANITRSLMQQKVNQAISSLT 281
Query: 310 SNAII 314
A I
Sbjct: 282 EKATI 286
>gi|82703453|ref|YP_413019.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira
multiformis ATCC 25196]
gi|82411518|gb|ABB75627.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosospira
multiformis ATCC 25196]
Length = 626
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 5/139 (3%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQ 127
E+ ++ LI + L +QE + G+ + + S + + +L Q
Sbjct: 81 EVRAAILEGLIQQRLLRQEASRVGLGVADAQLIEMIQNIDLFQEDGNFSKQRYEEWLRNQ 140
Query: 128 GIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLF 185
G+ F+ L + +V + E K + V + L
Sbjct: 141 GMNARAFEARLRQDLMRQQLVDPFSKNAFISHSVAERILRLGDEKREVRVVQIQPEQFLA 200
Query: 186 SIPDNKLQNQGFVQKRIKD 204
++ + + + +
Sbjct: 201 NVKPGNDAIRAYYEAHKAE 219
>gi|183601065|ref|ZP_02962558.1| hypothetical protein PROSTU_04689 [Providencia stuartii ATCC 25827]
gi|188019406|gb|EDU57446.1| hypothetical protein PROSTU_04689 [Providencia stuartii ATCC 25827]
Length = 618
Score = 44.3 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 51/389 (13%), Positives = 109/389 (28%), Gaps = 87/389 (22%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIAL-- 62
S FIK+L +L ++ V+ SS +NG+ I+ +R +L
Sbjct: 11 SPFIKVLLAIIILSF--VLTGVAGYMIGGSSNDAAKVNGQSISREQFQTAFSQERQSLQD 68
Query: 63 ---LKLQKINGE------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HA 110
K +I G L + LI TL + + ++ V +
Sbjct: 69 SLGDKFSEIAGNEESMKFLRNQVLNNLINSTLMAEYANELNLSASDQQVKDAIFEMPVFQ 128
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI---------------------WPDVVK 149
N + + L ++ + + I + ++V
Sbjct: 129 TNGKFDGDKYRQILAANNYSADNLAEQVRANLILSQLSDSFIKTDFALPSEVKTYAELVL 188
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVRE-YLIRTVLFSIP-------------------- 188
+ ++ L + KQ ++ Y F P
Sbjct: 189 QEREIRVATLSLADEQAKQTATEDEIKAYYNANQDSFIAPEKVQVSYVEIDAAALPPQSV 248
Query: 189 ---------DNKLQNQGFVQKRI---------KDAEESRLRLPKDCN----KLEKFASKI 226
+ L+N +++ K+A L + EK K+
Sbjct: 249 TDEEVKTYYEQNLKNYTQAEQKHYSMIQVASEKEANAIIDELKAGADFVALATEKSTDKL 308
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IAL 284
+ G ++ E+ + N + + P + + D + + ++
Sbjct: 309 SAGNKGIIGWMEEASTPSEIVNANLTEKGQISTPIKSDSNFVIFRLDDIKPESIKPLDSV 368
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
K + + K K + +K+ A
Sbjct: 369 KDEIKNKLIQDKNSKQFYDLQQKVSEAAT 397
>gi|238024223|ref|YP_002908455.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Burkholderia glumae BGR1]
gi|237878888|gb|ACR31220.1| Putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Burkholderia glumae BGR1]
Length = 319
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 78/292 (26%), Gaps = 61/292 (20%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ +NG IT + + + Q + +LI L +Q +
Sbjct: 72 EGVVARVNGVAITRDQLEQ-ARVAANQPDTASVRAALKNQLITRELLRQAAASAHYD--- 127
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH---FKQYLAIQSIWPDVVKNDFMLKY 156
+ + +++ + ++ + + VK +
Sbjct: 128 ----------------TYPQVLAAVEQAKSLAMTQAWLRDHIKPEPVTDAEVKAKY---- 167
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E+ A E R ++ ++ + + + A+ ++L
Sbjct: 168 ----DEVVAGLG------QTELKPRVIVLK---DRASADAALAQLKQGADFAQL------ 208
Query: 217 NKLEKFASKIHDVSIGKAQYL-LESDLHPQFQN---------LLKKSQNNTT-NPYVTQK 265
+ A + G ++ + P Q LLK T P
Sbjct: 209 --ARQAADGPNAAQGGALNWVSFRQPVPPGGQQGWPQPLAEALLKLPVGGVTSAPVEADG 266
Query: 266 GVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +KR + K L ++K E + L A I
Sbjct: 267 RFWILRVDEKRATRIPAYADAKDVLRRGLEQAALQKATIETMVGLLKQAQIQ 318
>gi|218893343|ref|YP_002442212.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa LESB58]
gi|218773571|emb|CAW29385.1| probable peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas aeruginosa LESB58]
Length = 314
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 134 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELYRQAA 191
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLES-DLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL L P + L++ + + P G
Sbjct: 192 DGDFAELARKHSDDPQTARNGGDIGGLLAQVQLLPAIRPALERLKVGAVSEPIQGANGFH 251
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 252 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 298
>gi|115351959|ref|YP_773798.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
gi|115281947|gb|ABI87464.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
Length = 644
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 24/175 (13%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S ING IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAINGHKITRVEFDGAFRQQIDQARQALGGQFDIKAFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E ++ +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQRLHLTASDNAVRDALMSDPMIASLKKPDGSIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
QG+ +++ + +V + F K + A +Q+ V+
Sbjct: 145 FQGMTPEQYQERVRYSLALQQIPASIVASAFTPKGPAQRLSELAAQQREVQALVQ 199
>gi|291529969|emb|CBK95554.1| PPIC-type PPIASE domain [Eubacterium siraeum 70/3]
Length = 472
Score = 44.3 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 70/235 (29%), Gaps = 35/235 (14%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK-----------QYLAIQSI 143
IT + V+ + + + E +S D+ +K +Y+A+
Sbjct: 218 ITVSDSEVDDYITKLTAEAKQAYEKSASSYA----TDSEYKKVWIPKDARYIKYIAVGIA 273
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
D + + + K+ K ++E + ++K
Sbjct: 274 SSDYAEINAARNESGADDAEIDKKRDEKLAEIKE---------------KADAALKKATA 318
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
+ + + + + + + + + ++ F + + + T
Sbjct: 319 EGADFDAVVKEYSSAYSESTKGEQILVLNSKGLISDALYDAVFAL---EKPGDISGLIPT 375
Query: 264 QKGVEYIA-ICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G + + D + +++ + + + ++ + +++ RS Y
Sbjct: 376 DSGYYIVKYVSDAKVTDSDLSDYRKTVRQELLTSRQSEKTNAILEEWRSAVNYEY 430
>gi|300114008|ref|YP_003760583.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
watsonii C-113]
gi|299539945|gb|ADJ28262.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrosococcus
watsonii C-113]
Length = 640
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+L +IP + + +A RL+ + ++ K S+ + G +
Sbjct: 271 ASHILITIPPQGDEAVRQQAQEKAEAVLERLQQGEAFEEVAKEVSEDPGSAKKGGDLGFF 330
Query: 238 LESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRD 277
+ P F+ + + + P +++ G I +
Sbjct: 331 GRGVMDPAFEKAVFSLEETGVLSEPILSKFGYHIIKLTGIEP 372
>gi|27368132|gb|AAN87191.1| LipA [Bacillus cereus]
Length = 248
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 32/210 (15%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFML 154
+ G E+F S L++ G+ ++ K+ + + + +K
Sbjct: 61 KVSDEEAKKKVEEAKDKMG---ENFKSTLEQLGLKNEDELKEKMKPEIAFEKAIKA---- 113
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
E ++ KN E + +L K +K+ ++ +
Sbjct: 114 --TVTEKDV-------KNNYKPEMKVSHILVK--------DEKTAKEVKE----KVNNGE 152
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
D L K S+ G+ +F+ K ++P T G I
Sbjct: 153 DFAALAKQYSEDTGSKEQGGEISGFAPGQTVKEFEEAAYKLDAGQVSDPVKTTYGYHIIK 212
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ DK++L +K + +++ +
Sbjct: 213 VTDKKELKPFDEVKEKIRKDLEQQRLQDRQ 242
>gi|117929118|ref|YP_873669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidothermus
cellulolyticus 11B]
gi|117649581|gb|ABK53683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidothermus
cellulolyticus 11B]
Length = 321
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 32/116 (27%), Gaps = 9/116 (7%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--------K 64
++ + + + + T+ ITD + K ++
Sbjct: 1 MRRWHSPLLAAMLGTAALAISACGPAHPGAAATVGDVRITDAQVQKAANVMLQDSGTRAA 60
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
Q L + + LI + L ++ G+T V + A S
Sbjct: 61 AQADPAGLRRDVLTRLIKDVLLQRAAASRGVTVSEADVQHELA-LAEQQEGSRAQL 115
>gi|313105527|ref|ZP_07791795.1| putative peptidyl-prolyl cis-trans isomerase, PpiC [Pseudomonas
aeruginosa 39016]
gi|310878297|gb|EFQ36891.1| putative peptidyl-prolyl cis-trans isomerase, PpiC [Pseudomonas
aeruginosa 39016]
Length = 247
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 8/167 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + E+ A Q K L R I + G + R + E R
Sbjct: 67 VPEDYPSDAELQAAYQANKAQLAVPALYRVSQIFIAASAA--GGLAEARKRAQELYRQAA 124
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLL-ESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVE 268
D +L + S + G LL ++ L P + L++ + + P G
Sbjct: 125 DGDFAELARKHSDDPQTARNGGDIGGLLAQAQLLPAIRPALERLKVGAVSEPIQGANGFH 184
Query: 269 YIAICDKRDLGGEIA--LKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ + ++RD ++ L + E+ Y+ L +NA
Sbjct: 185 LVKLTERRDARLATLDEVRGRLRESLRAQRQEQIAKAYLDGLVNNAT 231
>gi|240849866|ref|YP_002971254.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup]
gi|240266989|gb|ACS50577.1| peptidyl-prolyl cis-trans isomerase [Bartonella grahamii as4aup]
Length = 317
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 35/193 (18%)
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+ + Q + + + K + ++E ++ E R +L
Sbjct: 120 MRDNVLQQLYFKQAI----VDKISDTDLEALYKEEVAALPKEDEVKARHILVKT------ 169
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLESDLHPQFQNL 249
K+AE L K E+ A K G Y + F++
Sbjct: 170 --------RKEAEAIIKHLNKG-ENFEEIAKKSSTDGSAAVGGDLGYFSHGQMVKPFEDA 220
Query: 250 -LKKSQNNTT-NPYVTQKGVEYIAICDKR----DLGGEIALKAYLSAQNTPTKIEKHEAE 303
T P + G I + D+R ++ K L Q + ++
Sbjct: 221 AFGLKIGEYTKQPVESPFGWHIIKLEDRRLKQPPAFDDV--KEMLRTQLIKKRYQEL--- 275
Query: 304 YVKKLRSNAIIHY 316
+ LRS + Y
Sbjct: 276 -IVDLRSKMDVKY 287
>gi|71278179|ref|YP_270447.1| peptidyl-prolyl cis-trans isomerase D [Colwellia psychrerythraea
34H]
gi|71143919|gb|AAZ24392.1| peptidyl-prolyl cis-trans isomerase D [Colwellia psychrerythraea
34H]
Length = 638
Score = 44.3 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 22/160 (13%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------GDISK-RIA-- 61
+ +++ F + + SY + +S T+NGE I+ + R+A
Sbjct: 11 GLTAKIILGLIILTFAVAGVGSYTNSVDTS--VATVNGEPISQQAFNKAYQAQRGRMAQQ 68
Query: 62 ----LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-NT 113
L + + LI E L Q E I + +
Sbjct: 69 FGEMFDTLSNDANYMANFRQGVLDNLINEKLIDQNSEALAIRVSDLRLKETIRKMPEFQV 128
Query: 114 GLSAE--DFSSFLDKQG-IGDNHFKQYLAIQSIWPDVVKN 150
+ + + + +++ G + F+ YL ++ + +
Sbjct: 129 DGTFDNNRYLAIINQAGFFQSSDFRDYLRVEMTRRQLSQA 168
>gi|91215922|ref|ZP_01252891.1| putative exported peptidyl-prolyl cis-trans isomerase
[Psychroflexus torquis ATCC 700755]
gi|91185899|gb|EAS72273.1| putative exported peptidyl-prolyl cis-trans isomerase
[Psychroflexus torquis ATCC 700755]
Length = 485
Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 90/300 (30%), Gaps = 36/300 (12%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ + ++ + DISK +K Q++ + ++ L + + F+
Sbjct: 65 DGVAAVVGDYLVLESDISKAYIDMKNQQVGEITYCDVAETILENKLFAHHAVQDSLPFNP 124
Query: 100 NTV----NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY---LAIQSIWPDVVKNDF 152
+ V + Q R G S + F ++ + + Q + + ++
Sbjct: 125 SRVESFTDQQIDQFVRQVG-SMDKLLEFYKID--SESELRDQLNEINTQRMLAEEMQGSI 181
Query: 153 MLKYGNLEMEI----PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ + E A + + E + ++ + + Q + K
Sbjct: 182 VDEVEITPEETRDFFEAIPKDEIPLINDEVELAQIIVRPEVGEKEQQAVIDK----LNFY 237
Query: 209 RLRLPK--DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVT 263
R + S+ GK E + +F++ + + P+ T
Sbjct: 238 RDDVVAGGSFATKAVLYSEDRGSRSQGGKITLTREDNFVKEFKDAAFSLQEGEVSRPFET 297
Query: 264 QKGVEYIAICDKR-------------DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ G + + R ++ E KA + KI E ++ + R
Sbjct: 298 EFGWHILTVEKIRGQQVDVRHILLYPEISSEAIQKAKDEIELVRKKIVNGEVDFKEAARE 357
>gi|312880257|ref|ZP_07740057.1| conserved hypothetical protein [Aminomonas paucivorans DSM 12260]
gi|310783548|gb|EFQ23946.1| conserved hypothetical protein [Aminomonas paucivorans DSM 12260]
Length = 344
Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 82/245 (33%), Gaps = 14/245 (5%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L K + ++V +E+E IT + V + + E + +L + + +
Sbjct: 84 LRKAVLDNIVVSEQLLREVENQKITVGDDEVATALKRIQDQFP-TKEAYMQYLQRSNLSE 142
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
K L Q +++ ++ MK++ R R + +++
Sbjct: 143 KDVKARLREQIAQQKLME-KVSAGASVDIVDARKLYDAMKDMMFR----RPMGYTVNVVT 197
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNLL 250
+++ K+A + L K + L+ + I + + K ++ + +L Q +
Sbjct: 198 FRSESVA----KEARQKLLAGEKWDDVLKACSGDIGNSTPYSKPVFIPDRELASDLQVIR 253
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAEYVKK 307
T +A+ ++ + + K + + Y ++
Sbjct: 254 TLGIGKLTPLVRITSDDILLAVKRTKEAERVLPFAEVSGDIEQTLLAQKKRELQGAYFEE 313
Query: 308 LRSNA 312
L+ A
Sbjct: 314 LKKKA 318
>gi|62184931|ref|YP_219716.1| hypothetical protein CAB299 [Chlamydophila abortus S26/3]
gi|62147998|emb|CAH63749.1| putative exported protein [Chlamydophila abortus S26/3]
Length = 361
Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 33/184 (17%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKS 93
+ V+T D+ +++ LL LE + ++ +I E L + +
Sbjct: 61 DDTVVTTLDVIQKLNLLFASSYPQLLESYPARSQYYTAMWPVVLESVIDEFLMVADAKAK 120
Query: 94 GITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
I D TVN ++ ED + + L Q +
Sbjct: 121 KIQVDPTTVNQEIEAMFGRDLSFFYVHFDMTPEDIFKVVHRT----------LIAQRVMG 170
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF--VQKRIK 203
+V++ MLK ++ N+ + + R V L +Q + R+
Sbjct: 171 MMVRSKVMLKVTPGKIREHYNQLAEEAAKTTLWKYRVVTIKAATESLSSQIADRICARLN 230
Query: 204 DAEE 207
+ +
Sbjct: 231 ETQS 234
>gi|323495052|ref|ZP_08100141.1| peptidyl-prolyl cis-trans isomerase D [Vibrio brasiliensis LMG
20546]
gi|323310709|gb|EGA63884.1| peptidyl-prolyl cis-trans isomerase D [Vibrio brasiliensis LMG
20546]
Length = 619
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 61/219 (27%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D V A LS ++ S + + + + + + + ++
Sbjct: 192 DIKKVTLSLADFAAKAELSEQEISDYYQQNPERY-TRPEQVKVAYVELSAQQLKENIEIS 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + E + K + + + +L + +Q Q + +
Sbjct: 251 DEQAEKYYQEHIDKYSSEEQRRVSHILI-----EGDDQAKAQAILDELNAGAD-FATLAE 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ TT + G I + +
Sbjct: 305 EKSDDFGSASE--GGSLGWIERDVMDPSFEEAAFALTKVGETTGLVKSDFGYHIIKLDEL 362
Query: 276 RDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+D + + A + + + E +L A
Sbjct: 363 KDSVAKPYQEVAAEIKQELKDQQAIDQYYELQSELEKVA 401
>gi|297193962|ref|ZP_06911360.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
gi|197723093|gb|EDY67001.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
Length = 216
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 43 RTTINGEVITDGDISKRIALLK-----------LQKINGELEKIAVQELIVETLKKQEIE 91
+ G+ I + ++ ++ L K +G+L + + +LIV+ + + +
Sbjct: 34 AAVVGGQRIEVSTVQAKVRDVREAQQAAPQSAQLIKDSGQLGRAKLYDLIVDRVVAKAAQ 93
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSF-LDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+G++ + + +G E ++ L ++G+ + + + + +
Sbjct: 94 DAGVSVSRKEIQDGRDELVEQSG-GEEQLAAMYLQQRGVAPDQVENAVRRDILVGKIATA 152
>gi|113474123|ref|YP_720184.1| hypothetical protein Tery_0223 [Trichodesmium erythraeum IMS101]
gi|110165171|gb|ABG49711.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 253
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 50/273 (18%)
Query: 45 TINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ +IT DI + +KL EL+ +E+I + +++GI ++ +
Sbjct: 1 MLQSIIITAEDI---LKHIKLSLKTSELK----EEIITREIILNAAKEAGIKVETEELQK 53
Query: 105 FFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY------- 156
L SA+D ++L+K + + F++ + I + +V + F K
Sbjct: 54 AADTMRFVNKLHSAQDTFAWLEKFCLSIDDFEEVVYISVVAQKLVAHLFADKVEPYFYEN 113
Query: 157 -----GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
G + E+ + Q + + ++I + + + I+D E R
Sbjct: 114 QLNYAGVVMYEVVLDDQDLG---------MELFYAIQEGETSFYDVAHEYIEDIELRRQ- 163
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270
V K DL P+ + P VT KGV I
Sbjct: 164 ------------GGYRGVLYRK-------DLKPEISAAVFAAKPPQMIKPIVTSKGVHLI 204
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + + L++ + A+ ++K
Sbjct: 205 FVEEIISAELDNKLRSQIFAELFDEWLKKQVES 237
>gi|167820136|ref|ZP_02451816.1| rotamase [Burkholderia pseudomallei 91]
Length = 180
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + +A+ RL
Sbjct: 27 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLSILTV----------------SGEADALRL 70
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 71 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 130
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 131 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 173
>gi|212219179|ref|YP_002305966.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154]
gi|212013441|gb|ACJ20821.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii CbuK_Q154]
Length = 522
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLTSAQFVAQL 153
>gi|149924928|ref|ZP_01913258.1| peptidylprolyl cis-trans isomerase [Plesiocystis pacifica SIR-1]
gi|149814196|gb|EDM73809.1| peptidylprolyl cis-trans isomerase [Plesiocystis pacifica SIR-1]
Length = 397
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 41/318 (12%), Positives = 94/318 (29%), Gaps = 57/318 (17%)
Query: 41 RIRTTINGEVITDGDISKR-----IALLKLQKINGEL-------EKIAVQELIVETLKKQ 88
+ T+ I D R LL+ + + + LI L
Sbjct: 72 EVLATVGDRSIPKADFLARYEPEATKLLERRDDGKVPDAYQAMQREKIIDALIWSELMAL 131
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN----HFKQYLAIQSIW 144
E E+SG+ + D++++L++ G + YL
Sbjct: 132 EAERSGVDVSPEK----LAEEEGKQKAHVADWNAWLERIGQTPEIRQAMTRDYLRE---- 183
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQ---KMKNITVREYLIRTVLFSIPDNKLQNQGFVQ-- 199
+++ E E+ A K +T + + R F I + +Q
Sbjct: 184 RALIEARKGP-IEATEEELRAAYDESIKAGRLTAPQPMARASHFLITYGPREGDEKIQPV 242
Query: 200 --KRIKDAEE-------------------SRLRLPKDCNKL-EKFASKIHDVSIGKAQYL 237
K+ ++ ++ + D N+ +++ G
Sbjct: 243 PFKQREETDQAVKDEWKAKAKARAEALRELAQQPGVDFNEFCREYSEGPGAYRGGDMGLF 302
Query: 238 LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QNT 293
++ + + ++ + P + KG I + + + G++ +A + Q
Sbjct: 303 PQTQMIKAYADVAFSLEIGVLSEPVESDKGYYVIKVFGRYE-AGDLPFEAVRADLVRQVE 361
Query: 294 PTKIEKHEAEYVKKLRSN 311
K++ K+L
Sbjct: 362 GQKLQMGREALRKELEER 379
>gi|161830280|ref|YP_001597297.1| hypothetical protein COXBURSA331_A1623 [Coxiella burnetii RSA 331]
gi|161762147|gb|ABX77789.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
Length = 522
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLTSAQFVAQL 153
>gi|29830081|ref|NP_824715.1| lipoprotein [Streptomyces avermitilis MA-4680]
gi|29607191|dbj|BAC71250.1| putative lipoprotein [Streptomyces avermitilis MA-4680]
Length = 219
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 44/144 (30%), Gaps = 15/144 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQK------ 67
+ I P+++ + G+ IT + R+ ++ +
Sbjct: 5 RRTALVLSAAIVAAAPLLTACGGEAHPGAAAVVGGQRITVAQLESRVNEVRTAQRAATTD 64
Query: 68 ---------INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
G L + + L+++ + + + +G++ + G +
Sbjct: 65 DAQYEQTIAKTGSLTRDTLHSLVLDRVLDRAAKDAGVSVTRKDAQQMRTALEQQAGGTKA 124
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQS 142
S++L + G+ L +
Sbjct: 125 LESAWLQQYGVAPGRLDDSLRTEI 148
>gi|317051803|ref|YP_004112919.1| hypothetical protein Selin_1633 [Desulfurispirillum indicum S5]
gi|316946887|gb|ADU66363.1| hypothetical protein Selin_1633 [Desulfurispirillum indicum S5]
Length = 480
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 19/215 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI-------TDGDISKRIALL---- 63
+ FV IF + I S +N I T + + I+ L
Sbjct: 18 FVIATFVGSIFVVWGI--QSGDQRSRGYVIKVNDIEIGPNEFNRTYNQVHQNISALFGNQ 75
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV---NYFFVQHARNTGLSAEDF 120
+IN ++ +I + LI + L QE ++ + + S +
Sbjct: 76 GDAEINRQIREIVIDNLISKALLLQEAQRRNLRVSDQELFNSIAAIEAFQEEGVFSRTLY 135
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
+ L+ + F++ + +S+ + ++N + + E ++ Q + +Y+I
Sbjct: 136 RNVLEANKLSPAIFEE-MQKESLLVEKIQNQIVAEVRITEDDLQEEFQWQQGRVAFDYII 194
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + + ++ V + + + PK
Sbjct: 195 --LFPELFADSVETNEQVLRAYHETNAKQYETPKS 227
>gi|253700332|ref|YP_003021521.1| hypothetical protein GM21_1709 [Geobacter sp. M21]
gi|251775182|gb|ACT17763.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 526
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 58/180 (32%), Gaps = 17/180 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---RIALLKLQ----- 66
++ FV IF + S T++G I+ D K R L Q
Sbjct: 20 VIVLSFVGTIFLVWGRGGEGSADGPGGYAATVDGTKISMDDFQKNYYRTRNLYEQIYGRS 79
Query: 67 -----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ L+K + ++ L +E +K GI + + V + A DF+
Sbjct: 80 LTPEMEKQMGLKKTTIGSMVDNVLTLKEAKKMGIKVNKDEVAAEIAKIPSFQNNGAFDFN 139
Query: 122 ---SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY 178
L + F++ + +N K + ++ +K + +Y
Sbjct: 140 LYQQTLKANRVTPKEFEETQEQDIL-VQKARNKVKEKATVTDADVMQEFKKQNDKVNLQY 198
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 21/183 (11%)
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV--LFSIPDNKLQNQGFVQKRIK 203
++V F LK G L + K YL++ + S+ Q + V++++
Sbjct: 345 ELVTRAFALKQGELGGPVETAKGI--------YLLQVLDKKPSVVPPLAQVRAQVEQKLL 396
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLH-----PQF-QNLLKKSQNN 256
+ + + + K L++ A G Y + P+ + + +
Sbjct: 397 EVKGAEVAKKKAEEALQQLAKGGAAAKETGNFGYSPAGAIPTVGTSPELMEAAFALTPAS 456
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIA----LKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ G + A+ K + A + P K + +++K LR A
Sbjct: 457 PVAKQPVKVGERWYAVKLKNRVEAPTTDFAKASATIKQALLPKKQQDELDKWLKGLRDKA 516
Query: 313 IIH 315
I
Sbjct: 517 KIE 519
>gi|29654742|ref|NP_820434.1| hypothetical protein CBU_1451 [Coxiella burnetii RSA 493]
gi|29542010|gb|AAO90948.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii RSA 493]
Length = 522
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLTSAQFVAQL 153
>gi|329847914|ref|ZP_08262942.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19]
gi|328842977|gb|EGF92546.1| PPIC-type PPIASE domain protein [Asticcacaulis biprosthecum C19]
Length = 348
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 32/259 (12%), Positives = 78/259 (30%), Gaps = 47/259 (18%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR------IALLKLQKINGELEKIAVQE 79
C P V+ + I+GE + D+ I + ++ ++E
Sbjct: 24 CDKPTVTDRPPEPGDIAVAKIDGETVWASDVRAEAVAQGAIGPGEPLDPTSDMFARTLEE 83
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+I + L + G+ A L A + +
Sbjct: 84 VIDQRLLAKAARAKGLDKS----------VAAQRRLQAAE----------------DRIL 117
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+V+N ++ ++Q + E R +L +K + ++
Sbjct: 118 GDM----LVENTIDRDIDEKSIKEHYDEQVKLSKQSEEIRTRVILLK---SKEEADNVMK 170
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTT 258
+ + + + ++ +F S G Y + ++ +L ++ +T
Sbjct: 171 AVQGGSLFEAMAMERSIDQTTRF-------SGGDMGYFTTDIMPQAYKGVLSTAKIGDTV 223
Query: 259 NPYVTQKGVEYIAICDKRD 277
P + G + + D+R
Sbjct: 224 GPVQAEGGWAILRVEDRRP 242
>gi|261253455|ref|ZP_05946028.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio orientalis CIP
102891]
gi|260936846|gb|EEX92835.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio orientalis CIP
102891]
Length = 619
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 62/217 (28%), Gaps = 17/217 (7%)
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V A LS ++ + + + + + ++ + ++ E
Sbjct: 196 VTLSLEDFAAKAQLSEDEINDYYKQ---NPERYTRPEQVKVAYIELSAQQLKDDIQVSEE 252
Query: 162 EIPANKQK--MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ Q+ K + + + +L + +Q Q + + +
Sbjct: 253 QAKQYYQEHLDKYSSEEQRRVSHILV-----EGDDQAKAQAILDELNAGAD-FATLAEEK 306
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ G ++ + P F++ +TT + G I + + +D
Sbjct: 307 SDDFGSASE--GGSLGWIERDVMDPAFEDAAFALTKVGDTTGLVKSDFGYHIIKLDELKD 364
Query: 278 LGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + A + + + E +L A
Sbjct: 365 SVAKPYAEVAAEIKQELKDQQAVDQYYELQSELEKVA 401
>gi|153209250|ref|ZP_01947306.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|120575458|gb|EAX32082.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
Length = 522
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLTSAQFVAQL 153
>gi|315500239|ref|YP_004089042.1| ppic-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis
excentricus CB 48]
gi|315418251|gb|ADU14891.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis
excentricus CB 48]
Length = 332
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 36/311 (11%), Positives = 88/311 (28%), Gaps = 49/311 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--- 69
+ +L + I C P + + I+G I D+ L
Sbjct: 10 VAVLALVTLTIAGCDKPTLDERPPEPGDVAVARIDGHTIWASDVRYEAVQQGLIGDGEPF 69
Query: 70 ---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
L + ++E+I + L Q K GI + A+
Sbjct: 70 DLASPLFRRTLEEVIDQKLLAQAALKKGIDRT---------ELAQR-------------- 106
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
++ + + V + +++ ++Q E R +L
Sbjct: 107 ---RIAAAREDILGHMLLEQSVDA----SIDDKKVKDLYDEQVKLAQKSEEIRARLILVK 159
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ + +++ + + + + ++ +F + G Y + +
Sbjct: 160 T---RPEADNVMRQLQGGSLFEAMAMERSIDQATRF-------NGGDMGYFTTDVIPESY 209
Query: 247 Q-NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ L+ P G + ++R +A + K+E+ +
Sbjct: 210 RAALMTAKPGQIAGPVQIDGGWAVFKVEERRPEQPMTIEEARPGI-VSALKLEQV-RGLL 267
Query: 306 KKLRSNAIIHY 316
LR A + +
Sbjct: 268 GGLRDGARVEF 278
>gi|121607668|ref|YP_995475.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
gi|121552308|gb|ABM56457.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Verminephrobacter
eiseniae EF01-2]
Length = 374
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 12/153 (7%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KI 226
K +T E IR + + + + +++ + +A + KD +L K S
Sbjct: 210 DDKQLTAPE-RIRVRHLLVKEKSPEKRALIEQWLAEA-----KAGKDFAQLAKDHSEDNA 263
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEI 282
G +L + P F+ LK K + + T G I + ++R G G
Sbjct: 264 SAAQGGDLGFLTDGSTVPPFEQALKALKEPGDLSEVVETSFGYHIIRLEERRPAGLRGFD 323
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
++ L Q + + A+ ++L+ I
Sbjct: 324 EMRDPLRLQARNALLREARAKDAQRLQEEMQID 356
>gi|294339748|emb|CAZ88110.1| putative Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase
D) PpiD [Thiomonas sp. 3As]
Length = 640
Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 6/137 (4%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-PKDCNKLEKFASKIHDVS--IGK 233
E +L ++P + Q K +A +++ P + L + S+ + G
Sbjct: 271 ERRASHILIAVPTDATAAQQEQAKARAEAIAKQVKANPAEFPALARKDSQDPGSAEKGGD 330
Query: 234 AQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
Y + F + + + P TQ G I + + G + A ++
Sbjct: 331 LGYFTADAMVKPFADAVFGMQKIGEIAGPIKTQFGYHIIELTGIKP-GAQQPFDAVKASI 389
Query: 292 NTPTKIEKHEAEYVKKL 308
+ E + + +
Sbjct: 390 EKQLQQEAAQKQMSADV 406
>gi|210613468|ref|ZP_03289727.1| hypothetical protein CLONEX_01934 [Clostridium nexile DSM 1787]
gi|210151168|gb|EEA82176.1| hypothetical protein CLONEX_01934 [Clostridium nexile DSM 1787]
Length = 245
Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 77/280 (27%), Gaps = 46/280 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
MS + + GE IT + + + ++ ++ + + +
Sbjct: 1 MSQEVLAVVAGEEITQAEFDAFLQGVPREQQPYLSNPQFREQCLEQLI------------ 48
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
A+N + + K ++ + Q + +K+ + +
Sbjct: 49 -------ALHMFAKNGEEMKLEETEEFKKL---VESARRDILAQMAMRETLKDVVVSEEE 98
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ K TV + +L ++ ++
Sbjct: 99 IEAYYEANKQHFTKGDTVS---AKHIL-------TDSEEKCNSILESITTGEKEFETA-- 146
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
++F++ G + +F++ + P TQ G I + K
Sbjct: 147 -AKEFSTCPSGAKGGDLGEFGRGQMVKEFEDAAFAAEIGHVVGPVKTQFGYHLIKVEKKN 205
Query: 277 DL----------GGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ L + TK+E+ + +YVK
Sbjct: 206 EAIVASLEEVKETIRRTLLQQKQNEAYNTKVEEMKKKYVK 245
>gi|323466514|gb|ADX70201.1| Protease maturation protein [Lactobacillus helveticus H10]
Length = 301
Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 66/217 (30%), Gaps = 33/217 (15%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
K K + + I LI + L +Q G S VN + + G + F+
Sbjct: 45 FYKAIKTSPSSKTILANLLIYDALNEQ----YGKKLSSKAVNQEYNNYKERYG---DQFA 97
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
SFL + G F++ + I + +K +K ++
Sbjct: 98 SFLSQNGYTTTSFRRMIKINLLSKIALKAQIKPT--------DKQLKKEWKTYSPSVTVQ 149
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLE 239
+L K + +L L + S + GK +
Sbjct: 150 HIL------------TTDKNTANTVIQKLNNGTSFASLAQKYSVDSSSSSNGGKIAAFNK 197
Query: 240 --SDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAI 272
L F++ K +N TT P T G E I +
Sbjct: 198 DNKQLDSSFKDTAYKLKNGEYTTTPVKTTNGYEIIKM 234
>gi|307151228|ref|YP_003886612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC
7822]
gi|306981456|gb|ADN13337.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Cyanothece sp. PCC
7822]
Length = 247
Score = 43.9 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 94/265 (35%), Gaps = 46/265 (17%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
IT DI K + + +I +E+I +++I E +K+GI ++ + +
Sbjct: 5 ITPSDIFKAVQI--SCQIPEFIEQIVTRKIIEE-----AAKKAGIKIETEELQKAADEFR 57
Query: 111 RNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
L AED +L+K + + F++ + I I +V + F K + N+
Sbjct: 58 LGNQLQNAEDTWKWLEKYSLSLDSFEELVYINLISNKLVNHLFGDKI---DAYFFQNQLD 114
Query: 170 MKNITVREYLIR------TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
+ + E ++ + + I + ++ + I + E R
Sbjct: 115 YGGVVMYEVVLEDKDLALELFYGIQEGEMSFYEVAHQYIAEQELRRK------------- 161
Query: 224 SKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G + +L P+ ++ + P +T KGV I + E
Sbjct: 162 -------CGYLGMVNRKNLKPEISAVVFAANPPQVLKPIITSKGVHLILV--------EE 206
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKK 307
+K L+ +++K+
Sbjct: 207 IVKPELNQNLARKIAADLFTDWLKE 231
>gi|309781952|ref|ZP_07676683.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia sp.
5_7_47FAA]
gi|308919296|gb|EFP64962.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia sp.
5_7_47FAA]
Length = 635
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 49/396 (12%), Positives = 106/396 (26%), Gaps = 106/396 (26%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKLQKIN 69
L+ V F + SY S+ SS ++G+VI+ ++ R+ L ++
Sbjct: 3 LVLLILVFPSFVFFGVQSYSSFMDSSHDAAKVDGKVISTNEVDARVREQTERLRQMLGAQ 62
Query: 70 GELEK--------IAVQELIVETLKKQEIEKSGITFDSNTV------------------- 102
+ + + +I + + E+ ++ +T + +
Sbjct: 63 YDPRQFEGPQMRRDVLDGIIQQRVLANEVTRANLTISNEKIRDTILQIPAVAALRKPDGS 122
Query: 103 --NYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
+V+ ++ E L + + ++ + +V ++ E
Sbjct: 123 FDQEAYVRLLSAQNMTPEQLEGNLRFELSQQQIPQSIVSSAFVPKSLVDRLIQVRDQQRE 182
Query: 161 MEI--------PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV-------------- 198
++ A Y FS+P+
Sbjct: 183 VQALLFKPADYAAKVNADDKAIQAYYDAHQQEFSVPEQVKAEYVVFSGEEMMKQIPVTPE 242
Query: 199 ---------QKRIKDAEESRL-------------------------------RLPKDCNK 218
R K EE R + P
Sbjct: 243 QLKEYYDQNAARFKTQEERRAAHILIKLPDNAKPADKEAAKKKAEEVLAEVRKNPASFAD 302
Query: 219 LEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICD 274
L K S + G+ +L + P F+N L K + ++ + G I + +
Sbjct: 303 LAKKYSGDPGSAAQGGELGFLGKGATVPPFENALFALKQPGDISDVVQSDFGFHIIKLEE 362
Query: 275 KRDLG------GEIALKAYLSAQNTPTKIEKHEAEY 304
+ G + L+ L Q K + +
Sbjct: 363 VKGGGVQPLEAVKPELERELRTQLANKKYSELADAF 398
>gi|254520547|ref|ZP_05132603.1| ppic-type ppiase domain-containing protein [Clostridium sp.
7_2_43FAA]
gi|226914296|gb|EEH99497.1| ppic-type ppiase domain-containing protein [Clostridium sp.
7_2_43FAA]
Length = 248
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 88/281 (31%), Gaps = 46/281 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +I TI G+ I + D+ I K A ++L+ + + + I G
Sbjct: 1 MEDKILVTIAGKEIKESDLQNMIMKYPADKRAYFETVEAKKQLLEQMVSFELINMLGKEL 60
Query: 98 DSNTVNYFFVQH--ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + A N L+ + L L+
Sbjct: 61 NIQDTEEYKENVRQAENDILTQLTLNKLL-----------------------------LE 91
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ + K ++ + + ++ K + + L +
Sbjct: 92 VTVTDEDALNYYNNNKGEFTQQPTVSAKHILV-----DSKELCDKIKSEIDSKELTFEEA 146
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
K SK ++G + + P+F++ K N + P TQ G I + D
Sbjct: 147 AMKYSTCPSKEEGGNLGAFGRGM---MVPEFEDEAFKLDINVVSEPVKTQFGYHLIKVED 203
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEK-HEAEYV---KKLRSN 311
K + E+ + + AQ +++ + +Y+ K+L
Sbjct: 204 KNEGR-EMPFE-EIKAQIVNKLLQEMQQRKYLDVVKELEKK 242
>gi|312961518|ref|ZP_07776019.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas fluorescens WH6]
gi|311284197|gb|EFQ62777.1| putative peptidyl-prolyl cis-trans isomerase, PpiC-type
[Pseudomonas fluorescens WH6]
Length = 301
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 6/146 (4%)
Query: 174 TVREYLIRTVLFS-IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ +R +L PD+ + + + K+++ G
Sbjct: 143 SAPLLAVRHILLECAPDDIEARDLAHSQAEVLLLSLEEQPGQFAELALKYSACPSKAQGG 202
Query: 233 KAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---L 288
+ + P+ + L + P ++ G I++ D+R G + +A +
Sbjct: 203 SLGQVSKGQTVPELERQLFTLAPGLAGKPLESRYGWHVISV-DQRIEGQPLPYEAVAVAI 261
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAII 314
Q +K +Y++ L A I
Sbjct: 262 RTQLQQGVWQKALVQYLQTLIGAADI 287
>gi|163745064|ref|ZP_02152424.1| PPIC-type PPIASE domain protein [Oceanibulbus indolifex HEL-45]
gi|161381882|gb|EDQ06291.1| PPIC-type PPIASE domain protein [Oceanibulbus indolifex HEL-45]
Length = 282
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 34/277 (12%), Positives = 80/277 (28%), Gaps = 44/277 (15%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ T+N IT G + +A L + +L + + I++ L +Q
Sbjct: 30 DTVVATVNDTEITLGHML--VARATLPQQYQQLPDDVLFQGILDQLVQQTALA------- 80
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ F + LS E+ + L + ++ +
Sbjct: 81 ---DSFTGELPPRVTLSIENETRSLTA------------------GEAIEGVMAEDVSDE 119
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E++ + Q +E+ +L + + ++ AE ++ +
Sbjct: 120 ELQAAYDAQYKDAEPEQEFNASHILVETKEEADAIKAELEGGADFAEVAKEKSTGPSGPG 179
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL 278
+ + P+F+ + + P TQ G I + + R
Sbjct: 180 GG-----------SLGWFGPGMMVPEFEEAVAGMEAGGVSEPVETQFGWHVIKLNETR-- 226
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
GE + + + ++ L A +
Sbjct: 227 TGEAPALEDVREELETQVRQTKVQTAIESLTEAAKVD 263
>gi|114321433|ref|YP_743116.1| hypothetical protein Mlg_2284 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227827|gb|ABI57626.1| hypothetical protein Mlg_2284 [Alkalilimnicola ehrlichii MLHE-1]
Length = 484
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 55/189 (29%), Gaps = 20/189 (10%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKIN------------GELEKIAVQELIVETLKKQ 88
R+ + G IT +++R + Q L + A LI E L
Sbjct: 40 RVVAEVEGVEITREQVAERARQQQRQLEEFFGDLGAAGVDESTLRREARDGLIEEALLHV 99
Query: 89 EIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ + V Q + S E + L + + ++ + +
Sbjct: 100 LVTDGNLRVGDRAVAQRIRQQDIFHQGGTFSMERYQQLLSANRLTPDQYE-----EMVRR 154
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
D++ F + + ++ + ++ I ++ S + + +
Sbjct: 155 DLLVEQFQRAVTGSALVRDWDTARLAALDRQQRDIHYLVVSADEAPDAVSDAAVQAHYEE 214
Query: 206 EESRLRLPK 214
R P+
Sbjct: 215 NAERYTAPR 223
>gi|325685772|gb|EGD27846.1| peptidyl-prolyl cis-trans isomerase [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 313
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 54/319 (16%), Positives = 93/319 (29%), Gaps = 52/319 (16%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQ 66
+ K L VL + + + + S+ + +N G IT + +
Sbjct: 4 FNFMKKHLKKIAVLAGAAAIGLSTAACSSSSATV---VNYKGGKITQDE------YYEAM 54
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
K + V +I TLK Q G S +N + ++ + G +FS+ L
Sbjct: 55 KDTSAGQSTLVSLIIYRTLKAQ----YGDKVSSKKINAEYNKYKKQYG---SNFSTVLSY 107
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE-------YL 179
G+ FKQ LA + A + +K T + Y
Sbjct: 108 SGLTTKSFKQNLA-------------------TNLYSVAALKDLKKPTTTQEKNWWKSYH 148
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+T + I +K V K++K K + L
Sbjct: 149 TKTTVQHIVVDKKSTAETVIKKLKSGTSFATLAKKYSTDTATKKKAGKLAAFDSTDTSLS 208
Query: 240 SDLHPQFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
S + K + TT P T G E I + + G + K
Sbjct: 209 STFKSA---VWKLKEGEYTTTPVKTSSGYEVIKVLKTTE-KGSYTKNKSFIDKQLYAKWA 264
Query: 299 KHEA---EYVKKLRSNAII 314
+ + K+ A +
Sbjct: 265 ADSNTMTKIISKVLKKANV 283
>gi|165919397|ref|ZP_02219463.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|165916913|gb|EDR35517.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
Length = 522
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLTSAQFVAQL 153
>gi|89073234|ref|ZP_01159764.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium sp.
SKA34]
gi|89050944|gb|EAR56408.1| putative peptidyl-prolyl cis-trans isomerase D [Photobacterium sp.
SKA34]
Length = 630
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 47/400 (11%), Positives = 101/400 (25%), Gaps = 98/400 (24%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M ++ + + ++ F + SY + + +N + I+ +
Sbjct: 1 MMERLREGANSIWVKIILSLIIFSFVFAGVGSYLAGGNEQ-VAAKVNDKEISQRAFEQAY 59
Query: 61 A-------------LLKLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNY 104
KL +++ ++ ++ + L +Q + G+ V
Sbjct: 60 QNQRNQMQQRLGDYFSKLMGDPAYVQQFRNSVLERMVNDELIEQRATELGLGVSDAQVKQ 119
Query: 105 FF----------------------------VQHAR--NTGLSAEDFSSFLDKQGIGDNHF 134
Q A + + F S L+ N+
Sbjct: 120 AIVAMPAFQVDGVFNNEQYNLTLRRAGFSPEQFAESIRKDMLRQQFLSALEGSDFALNNE 179
Query: 135 KQYLAIQSIWPDVVK------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
L VV+ DF K + E A K K R ++ +
Sbjct: 180 LNELRKLESQERVVRTLKLNLADFTDKVTVTDKEAKAYYDKNKTQFTRPAQVKVSYIELS 239
Query: 189 DNKLQN-----------------------------------QGFVQKRIKDAEESRLRLP 213
D L N K +A + L+
Sbjct: 240 DKNLVNNIKITDKETEAYYNEHKSKYSTAEKIQVSHILVKGDSDTSKAKAEALLAELKGG 299
Query: 214 KDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEY 269
+ + K +S GK + + + P F+ + + + G
Sbjct: 300 ANFADVAKKSSDDTFSAKDGGKLDWFGKGVMDPAFEEAAFSLAKPGDMSGLVKSSFGYHI 359
Query: 270 IAICDKRDLG----GEIALK--AYLSAQNTPTKIEKHEAE 303
I + + ++ A L Q + K +++
Sbjct: 360 ILLDGIEEPKVKPFADVKASIVAELQEQQVAEQFYKLQSK 399
>gi|86749346|ref|YP_485842.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris HaA2]
gi|86572374|gb|ABD06931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris HaA2]
Length = 350
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+++ + + + R++ + + ++P + ++ K K E+ + +L
Sbjct: 173 SEDDLQRVYDANRAALLMPRQFELAQIFVALPKDA--DKAAEDKAKKSVEDIQRKLKAPG 230
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEYIAICDK 275
A++ + + G ++ ES + P+ + +++ S+N ++P G ++ + D
Sbjct: 231 VDFAAVAAEAGNANGGALGWVAESQIRPEIRAKVMELSKNAVSDPIKLDDGWHFVKVLDT 290
Query: 276 R 276
+
Sbjct: 291 K 291
>gi|325110000|ref|YP_004271068.1| hypothetical protein Plabr_3449 [Planctomyces brasiliensis DSM
5305]
gi|324970268|gb|ADY61046.1| hypothetical protein Plabr_3449 [Planctomyces brasiliensis DSM
5305]
Length = 927
Score = 43.9 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 13/150 (8%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----TDGDISKRI 60
V T L ++ T ++ VS + A + + +NG +I T + +
Sbjct: 73 VGTVLGSQLQATTAASEAVVETSFGAVSEEDLAEVNNRQQMVNGFLIEAFRTAHEGDENA 132
Query: 61 ALLKLQKI----NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+LQ+ NG+ + A+ L L +E ++ G+ V + + + LS
Sbjct: 133 NSFQLQQALFGGNGDPNREALMHL----LMLEEAKEIGLDISQTQVKAYIDRV-TSNKLS 187
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
F + G+ L Q + +
Sbjct: 188 GRAFREITSRIGLSGEDLFDLLREQMVARE 217
>gi|21673044|ref|NP_661109.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium tepidum
TLS]
gi|21646111|gb|AAM71451.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Chlorobium tepidum
TLS]
Length = 700
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 6/137 (4%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+L + +K E L+ L S+ + G +
Sbjct: 348 ASHILIRLNPADKAEAARAMGLLKKISE-ELKGGASFASLAAKYSEDPGSARNGGFVGWF 406
Query: 238 LESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAIC--DKRDLGGEIALKAYLSAQNTP 294
+ + PQF Q + P TQ G+ I I D R + + ++ T
Sbjct: 407 TKDRMVPQFAQAVFAGKPGQIVGPVQTQFGLHIIKIEGFDNRRIVCSEVARQIKASTQTS 466
Query: 295 TKIEKHEAEYVKKLRSN 311
I++ ++ + +S
Sbjct: 467 ETIKRQAQAFLTEAKSK 483
Score = 36.2 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 257 TTNPYVTQKGVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ P T G + + ++ A K + Q + ++ +EY++ R NA I
Sbjct: 637 LSQPVQTSGGYALVQLTSRQLAPGTDLAAEKQKVLPQLMQARQQQFLSEYLQSYRRNAKI 696
Query: 315 HYY 317
+
Sbjct: 697 EDF 699
>gi|150389495|ref|YP_001319544.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
metalliredigens QYMF]
gi|149949357|gb|ABR47885.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
metalliredigens QYMF]
Length = 249
Score = 43.9 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 71/249 (28%), Gaps = 45/249 (18%)
Query: 42 IRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + + IT D+ + L +Q + + +K V EL+ + L ++ +
Sbjct: 6 VLAVVGEKNITKQDVEALMKTLDPQMAMQLQSEDGQKRLVNELVNQELFYLLAKEENLEK 65
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ A L K+ L Q ++++ +
Sbjct: 66 ED----------AYQADL----------------EKMKENLLKQYAINKLLRDITITDSE 99
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
Q + + +L + +++ + E
Sbjct: 100 ITNYYTENKAQFEQPA---QVQASHILVDSEEKAQGVLAELKEGLSFEEA---------- 146
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
K +S + G + + P+F+ + + P TQ G I + D++
Sbjct: 147 -ATKHSSCPSNAKGGDLGLFAQGQMVPEFEEAAFNMEVDTVSEPVKTQFGYHIIKVVDQK 205
Query: 277 DLGGEIALK 285
+ +
Sbjct: 206 PAQEKSLAE 214
>gi|310828352|ref|YP_003960709.1| foldase protein PrsA [Eubacterium limosum KIST612]
gi|308740086|gb|ADO37746.1| foldase protein PrsA [Eubacterium limosum KIST612]
Length = 253
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 87/285 (30%), Gaps = 55/285 (19%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQK----INGELEKIAVQELIVETLKKQEIEKS 93
M ++ + G+ I + D+ I L ++ E + ++EL+ + L E +K
Sbjct: 1 MEKQVVAVVEGKEIYNTDLEALIQQLPQEQQGQFRTKEGRRKLLEELVAQELFYLEGKKD 60
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ V+ A+ L + + F+ + D K++
Sbjct: 61 HEDESEEYL--ALVEDAKEKLLKSHMIAKFMKNVEVSDEEVKKF---------------- 102
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV---QKRIKDAEESRL 210
Y F PD+ + + Q+ I +E +
Sbjct: 103 ------------------------YDENPKQFIAPDSIRASHILLPSEQQAIDIIKEIKD 138
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTN-PYVTQKGVE 268
+ ++ G Y + + PQF+N ++ P T G
Sbjct: 139 GGKTFEEAAKAYSVCPSREQGGDLSYFSKGKMVPQFENAAFAMKVGEMSDEPVKTDFGWH 198
Query: 269 YIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
I + D + + ++ ++ K + + V +L+
Sbjct: 199 IIKVTDSKTSETIPYDVVKESA-RQYLLEQKQNRAFLDRVDELKK 242
>gi|119356179|ref|YP_910823.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides DSM 266]
gi|119353528|gb|ABL64399.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides DSM 266]
Length = 700
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 81/243 (33%), Gaps = 26/243 (10%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ--------GIGDNHFKQYLAIQSIWPD 146
I + TV+ + A + A+D L+K G + K L + D
Sbjct: 458 IRPSTETVDSA-RRLAMAFQMQAKD--KGLEKSASTEKLVVGKTGDFGKHTLIADIGFSD 514
Query: 147 VVKN-DFMLKYGNLEMEIPANKQ--KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ F K G L I K MK V + R + + ++K
Sbjct: 515 KITAFAFNGKEGALSDVIETEKGFYVMKLTGVNDTGYRRLDADLKKRITAELVRLKKEPV 574
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLESDLH------PQFQNLLKKSQN 255
++ L + L+K A+ + ++ + P + + ++
Sbjct: 575 LEKKLSLNAKQSGATLDKIAAAYPGTVVVTADDIRWVDGFIPGYGFDQPLVEAMSAMTEG 634
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEI---ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P T G + + K+++ E A K + + K+ + EY ++ NA
Sbjct: 635 KLSGPVKTNDGYAIVLL-SKKNMPAERDVEAAKTAFTPKIIQDKLNRLFTEYFATIKKNA 693
Query: 313 IIH 315
+I
Sbjct: 694 VIE 696
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Query: 180 IRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+L P NK + + ++ + + + +P + + V G +
Sbjct: 347 ASHILLRFNPGNKEEVEKVRERMVMIFKNLQAGVPFETLAGKYSEDPGSAVQGGDLGWFT 406
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ P+F + + P T+ G+ I +
Sbjct: 407 RESMLPEFSAAVFSGTPGAVVKPVQTKFGLHIIKVTG 443
>gi|320161645|ref|YP_004174870.1| putative peptidylprolyl isomerase [Anaerolinea thermophila UNI-1]
gi|319995499|dbj|BAJ64270.1| putative peptidylprolyl isomerase [Anaerolinea thermophila UNI-1]
Length = 438
Score = 43.9 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ K + +I + L QE K GIT ++ +
Sbjct: 115 PQTIGKQVLDAMIEDALVAQEAAKRGITVSEEEIDKEMQE 154
Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 62/199 (31%), Gaps = 35/199 (17%)
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+ DF + + G + H + Y+ + + L ++P ++K
Sbjct: 245 KQTYSDFLAKVQVYGYDEAHLRDYIKRLILKRKLADA--------LSADLPREEEK---- 292
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
R +L + + + K +D + KD + K G
Sbjct: 293 ----VWARHILVETEETAKEVLDRLNK-GEDWVKLAAEYSKDTSNANK---------GGD 338
Query: 234 AQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
+ + + +F++ + + P T G I + R++ L+
Sbjct: 339 LGWFGKGTMVKEFEDAVYALKVGEISQPVQTTFGYHIIQLLG-REV-------RPLTDSE 390
Query: 293 TPTKIEKHEAEYVKKLRSN 311
K + E++ + +S
Sbjct: 391 FNQKKQAAYDEWLTQAKSA 409
>gi|297374635|emb|CBL42922.1| PpiC-type peptidyl-prolyl cistrans isomerase [Candidatus
Magnetobacterium bavaricum]
Length = 323
Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 11/127 (8%)
Query: 163 IPANKQKMKNITVRE-----YLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--RLRLPKD 215
I N Q E Y F +P+ V+ ++A++ +L+ D
Sbjct: 115 IQKNVQAKNVTVTPEEAKKYYDENQKEFVMPEQVRAVHILVKT-EQEAKDLYDKLKKGGD 173
Query: 216 CNKLEKFASKIHDVS--IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
K S + G + + P F + + K + + P T G I +
Sbjct: 174 FAATAKSVSMDTATAEKGGDLDFFSRGQMEPSFDEAVFKLKKGELSTPVKTSFGYHIIKV 233
Query: 273 CDKRDLG 279
D ++
Sbjct: 234 VDNKEAK 240
>gi|269302857|gb|ACZ32957.1| conserved hypothetical protein [Chlamydophila pneumoniae LPCoLN]
Length = 363
Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 54/312 (17%)
Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKING-----ELEKI--------AVQE 79
A+ RI ++ E V+T D+ ++ LL ++
Sbjct: 49 SGLAIHDRILFKVDEENVVTTLDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLES 108
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGD 131
+I E L + + I D VN + +S D + +D+
Sbjct: 109 VIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNVIDRT---- 164
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
L Q + +V++ MLK G + +++ + +Y + T+ +
Sbjct: 165 ------LTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTES 218
Query: 190 NKLQNQGFVQKRIKDAE--------ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
Q V+ R+ +A+ + E+F+ + ++S Q L
Sbjct: 219 LASQIADKVRARLNEAKTWDKDRLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIG 278
Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEK 299
+ L P + G + + DK E +++ + + E
Sbjct: 279 YPKELCGL----------PKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQHLFALEAES 328
Query: 300 HEAEYVKKLRSN 311
E +Y +LR
Sbjct: 329 VEKQYKDRLRKR 340
>gi|90021259|ref|YP_527086.1| peptidase M20D, amidohydrolase [Saccharophagus degradans 2-40]
gi|89950859|gb|ABD80874.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Saccharophagus
degradans 2-40]
Length = 621
Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 58/210 (27%), Gaps = 15/210 (7%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
GIT TV ++ E + + + +++ I V +
Sbjct: 191 FGITIPKETVGDEVT-------VTPEQ-IEAYYQANQQEFSVPEKVSVDYIEISVAEIAK 242
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ +++ ++K + EY I +L + D VQ ++ E
Sbjct: 243 TIAVDEADIKAQYEQEKADFVESSEYEIAHILIADGDESASKIEEVQTQLAAGEAFETLA 302
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
+ + G L +F Q + + + P T G +I
Sbjct: 303 ETYSDDFGSRE------TGGSLGVLTTGIFPEEFEQAVYALEEGEVSEPVTTDAGTHFIK 356
Query: 272 ICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ K+ + + +
Sbjct: 357 VTSKKVEALASYEERKPEIKKAIQNLRAES 386
>gi|227517652|ref|ZP_03947701.1| peptidylprolyl isomerase [Enterococcus faecalis TX0104]
gi|227074909|gb|EEI12872.1| peptidylprolyl isomerase [Enterococcus faecalis TX0104]
Length = 362
Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ K + +L + + S + + S+ T+ G IT D +I
Sbjct: 15 TGVHKRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------G 67
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ A ++++ + + K G V F F+ L + G+
Sbjct: 68 QSTSQQAFSQMVIYKVFED---KYGNKVTDKDVQKKFDDAKEQMEAQGAKFTDALKQYGL 124
Query: 130 GDNHFKQYLA 139
+ FK+ L
Sbjct: 125 TEKDFKKQLK 134
>gi|254194298|ref|ZP_04900730.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
S13]
gi|169651049|gb|EDS83742.1| peptidyl-prolyl cis-trans isomerase C [Burkholderia pseudomallei
S13]
Length = 229
Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 25/165 (15%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + +A+ RL
Sbjct: 76 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLSILTV----------------SGEADALRL 119
Query: 211 R----LPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQ 264
R + +F++ S G ++ + L +N + ++ + P
Sbjct: 120 RNQLIQGASFGELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGS 179
Query: 265 KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
G + + DKRD+ + Q ++ +LR
Sbjct: 180 NGYHLLYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 222
>gi|168702269|ref|ZP_02734546.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Gemmata
obscuriglobus UQM 2246]
Length = 420
Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 91/272 (33%), Gaps = 32/272 (11%)
Query: 69 NGELEKIAVQELIVETL--KKQEIEKSGI-----TFDSNTVNYFFVQHARNTGL-SAEDF 120
N L K +ELI++ + K ++ K I + +++ ++TG S E+F
Sbjct: 156 NQVLRKTIERELILDEMYTKLKKANKMAIIDEVKELATQSIDRQLRMFRKDTGAKSEEEF 215
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREY 178
++ L QG+ ++ + Q + V + K + Q +
Sbjct: 216 AAILRTQGLTVPVIRRQMERQFMAEQYVSSVLKEKSRRTGLAEVRAYYDQHPDEFRRPDR 275
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRI---------KDAEESRLRLPKDCNKLEKFASKIHDV 229
++ LF N Q + D E ++ + K +
Sbjct: 276 VVWQHLFIAVRNYPNAQAAYNQAAALAQQANSGADLAELSMKYDEGFAK---QQKGLGAG 332
Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG----EIALK 285
+ +DL + + T G + + + RD+ G + AL+
Sbjct: 333 EKRN--EIQPADLE---ATVWSLQPGQVSGILQTPTGYHLVKVVE-RDMAGVQPFDAALQ 386
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
+ + + T ++E + V +L ++ +
Sbjct: 387 SKIRDKLTRAQMESEYQKLVDELWRKGVVRVF 418
>gi|330507465|ref|YP_004383893.1| peptidyl-prolyl cis-trans isomerase C [Methanosaeta concilii GP-6]
gi|328928273|gb|AEB68075.1| Peptidyl-prolyl cis-trans isomerase C [Methanosaeta concilii GP-6]
Length = 94
Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Query: 198 VQKRIKDAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
+K+ + +E + + K++ S G + + + P+F+ + +
Sbjct: 14 TEKKALEVKELLASGQESFAQMARKYSQCPSGKSGGDLGWFGKGRMVPEFEKAAFEGEKG 73
Query: 256 NTTNPYVTQKGVEYIAICDKR 276
P +Q G I + DK+
Sbjct: 74 KIIGPVKSQFGYHLIRVLDKK 94
>gi|312277862|gb|ADQ62519.1| Protease maturation protein [Streptococcus thermophilus ND03]
Length = 380
Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 13/127 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
L+ ++ VS + I ++ G+ +T GD+ L+ N
Sbjct: 74 LVLVAVSALVGAGAMYVSLGNKTTEETILVSMKGDTVTVGDV-----FNSLKGSN----- 123
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
Q ++ TL+K ++ G V+ + Q + G + FS L G + +
Sbjct: 124 QTQQSVLSATLQKVLEKEYGSKVSKEDVDKAYKQASEQYG---DQFSQVLAAYGQTEESY 180
Query: 135 KQYLAIQ 141
+ + Q
Sbjct: 181 RTQIRTQ 187
>gi|167589752|ref|ZP_02382140.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ubonensis Bu]
Length = 310
Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 56/337 (16%), Positives = 93/337 (27%), Gaps = 73/337 (21%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----------------IRTTINGEVIT 52
L + L V C V + ++ S++ ++NG I
Sbjct: 16 LPALARRLCAGLVAATLCGVTALDAQAATRSAKKPADAPLAASAALPAGAAASVNGVPIM 75
Query: 53 DGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
I + + K L +LI L +Q +K V V+ A+
Sbjct: 76 QAQIDEAVRAGKAPDTPA-LRAALKNQLIARELFRQAAQKQHYDTKPQVV--AAVEQAKA 132
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
++ + + + VK + +
Sbjct: 133 LAMTQAYL--------------RDQVKPAPVTDADVKARYDA--------------IVAT 164
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ EY P N K++ +R R +D KL + SK + G
Sbjct: 165 LGENEYK--------PSAIAVNDADTAKQL----IARFRKGEDFAKLAQDNSKGPAAAQG 212
Query: 233 KAQYLLESDLH-----------PQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGG 280
A + P + L+K Q T +P + + DKR
Sbjct: 213 GALNWISFKTPITAGNTQNWPQPLAEALVKLPQGGLTRDPVQVGDAYWILRVDDKRPTQV 272
Query: 281 EI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
K L Q +EK A+ V L NA I
Sbjct: 273 PAFDQAKDMLRQQLEQVAMEKATAQVVADLIRNARIQ 309
>gi|220919567|ref|YP_002494871.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219957421|gb|ACL67805.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 354
Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 42/319 (13%), Positives = 95/319 (29%), Gaps = 46/319 (14%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIA----LLKLQK 67
+L +L + + S + T NG IT G++ R+ ++ +
Sbjct: 1 MLRRIVLLGLVALAATACQPGSKDSKKSGPAVATGNGFTITAGELKARLDEQSPFIRARY 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
E +K + LI + +E E+ G+ + V + L ++
Sbjct: 61 STLERKKEFLDNLIRFEVLAREAERQGL-ANDPDVQLTLKKV----------MVQKLVQK 109
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
F+ +++ ++ K + R + ++++
Sbjct: 110 N-----FQD-----------ANGAAAEALPEADLQKYYDEHKAEYYRPRRVRLAAIVWNA 153
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDL 242
P + V K + + K+ + + + G + DL
Sbjct: 154 PAGSPERAAKVALAKKALAKLKAEEKKNTLAFAQLVNEFSEDAVSKATAGDLGFKSREDL 213
Query: 243 HPQFQN-----LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPT 295
+ T+ T V + ++D +KA + +
Sbjct: 214 EKAYSKEFADVTFNLQPGATSGVLETANAVYLVKGTGEQDELNRTFEQVKAQIQTKLYRE 273
Query: 296 KIEKHEAEYVKKLRSNAII 314
K K ++KKLR +A +
Sbjct: 274 KKTKEFDGWLKKLRDDAKV 292
>gi|331000463|ref|ZP_08324138.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis
YIT 11859]
gi|329571795|gb|EGG53475.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis
YIT 11859]
Length = 641
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQY 236
+L + N+ Q AE+ + D +K + A + S G +
Sbjct: 272 HILIAPDANEADKAKADQDAKAKAEKILAEVKADPSKFAQLAKENSADPGTAESGGDLDF 331
Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ + P+F + + ++ P T+ G I + D
Sbjct: 332 FTQGQMVPEFDKAVFGAKKDEIVGPVKTEFGYHIIHVTDI 371
>gi|226953081|ref|ZP_03823545.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter sp. ATCC 27244]
gi|226836173|gb|EEH68556.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter sp. ATCC 27244]
Length = 623
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 73/190 (38%), Gaps = 25/190 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
S IK +L++F +V I Y S + + ++NG+ I++ ++ I
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFSGGNKADVAKSVNGQDISNKELESAIK 60
Query: 62 -----LLKLQKINGEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
L L + + L ++ A+ L+ +L Q+ EK GI+ + Q
Sbjct: 61 NYKDQYLALVQGDESLLNLSAIQERAMDALVARSLLSQQAEKLGISLSDAQLEQMLAQQP 120
Query: 109 -HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----SIWPDVVKNDFMLKYGNLEMEI 163
+N S + + ++L G+ + L I ++ N + K +++
Sbjct: 121 SFQQNGQFSQQLYENYLRSVGLTNQALISSLRQDHALKMISSSLIDNALVSK---SDLQQ 177
Query: 164 PANKQKMKNI 173
AN Q +
Sbjct: 178 LANLQTEQRT 187
>gi|190893605|ref|YP_001980147.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli CIAT 652]
gi|190698884|gb|ACE92969.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli CIAT 652]
gi|327193395|gb|EGE60295.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli CNPAF512]
Length = 293
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 100/313 (31%), Gaps = 60/313 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + + V++++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKFALLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I +K + D + + +L + + +
Sbjct: 61 KKVAALSAAID--VKLLAADAIAEKLDQTD------EFKKRM--------QYLSDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + ++ PD VK + + E+ A E R +L D
Sbjct: 105 AYFKKHV-VDTVTPDEVKARY-------DKEVAAL------PKQEEVHARHILVKTEDEA 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + KD +L K S + S G Y + +F++
Sbjct: 151 KEIIKQLDA------------GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQNTPTKIEKHE 301
+ + P T G I + DKRD + + + + +
Sbjct: 199 FALEKGAYSKTPVKTDFGYHVIKVEDKRDAPPPPFDQVQDQVRQLVMRDKYLALLNQAKT 258
Query: 302 AEYV----KKLRS 310
+ + + LR
Sbjct: 259 SAKIEISDETLRK 271
>gi|83718610|ref|YP_442650.1| peptidyl-prolyl cis-trans isomerse D [Burkholderia thailandensis
E264]
gi|83652435|gb|ABC36498.1| peptidyl-prolyl cis-trans isomerse D, putative [Burkholderia
thailandensis E264]
Length = 632
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 73/233 (31%), Gaps = 33/233 (14%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-- 70
VL IV I ++ + S +NG IT + D R + + +++ G
Sbjct: 2 FFLLLIVLPGLGIVGIQGFRGFFDESANVAAVNGHKITRAEFDGMLRQQVDQARQMLGAQ 61
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV------NYFFVQHARNTG- 114
E + + LI + E ++ +T V + + G
Sbjct: 62 FDAKAFDTPERRQQLLDGLIQQRALADETQRLHLTASDGAVRQTLLSDPVVASLKKADGS 121
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
AE ++ L QG+ + +++ + +V + F K + A +Q+
Sbjct: 122 FDAERYTQMLAMQGMTPDQYQERVRYNLALQQIPASIVSSAFTPKSVARRLTELAEQQRE 181
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA 223
++ ++ D + Q + + + ++
Sbjct: 182 ---------VQQMMLKSADYATKVQPTDAQISAYYDAHKQAFATREAATIQYL 225
>gi|325132766|gb|EGC55448.1| leucine-responsive regulatory protein [Neisseria meningitidis
M6190]
Length = 275
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 12/111 (10%), Positives = 32/111 (28%), Gaps = 11/111 (9%)
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+L+ ++L Q ++ I ++ ++ LS F I +Q
Sbjct: 2 QLVNQSLIVQAGKRRNIQASEAEIDAVVAKNPALKNLSPAQRRDF--ADNIIAEKVRQQA 59
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSI 187
+Q + + +E + +Y + ++
Sbjct: 60 VMQ-------NSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHIVIKA 103
>gi|315173979|gb|EFU17996.1| putative foldase protein PrsA [Enterococcus faecalis TX1346]
Length = 362
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ K + +L + + S + + S+ T+ G IT D +I
Sbjct: 15 TGVHKRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------E 67
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ A +++ K E EK G + F + FS L + G+
Sbjct: 68 QSTSQQAFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 124
Query: 130 GDNHFKQYLA 139
+ FK+ L
Sbjct: 125 TEKSFKKQLK 134
>gi|210620774|ref|ZP_03292241.1| hypothetical protein CLOHIR_00184 [Clostridium hiranonis DSM 13275]
gi|210155168|gb|EEA86174.1| hypothetical protein CLOHIR_00184 [Clostridium hiranonis DSM 13275]
Length = 339
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 48/324 (14%), Positives = 102/324 (31%), Gaps = 28/324 (8%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62
SK+ S + L F+ +++ + + S I I+GE + ++ KR
Sbjct: 15 SKLLDSTLLIVIALLLIFLTMLYVYIRPIDSNIKNDSKEIVAYIDGEKLRFNEVEKRAEE 74
Query: 63 LKLQKINGELEKIAVQ----ELI-----VETLKKQEIEKSGITFDSNTVNYFFVQ----H 109
N +E + ELI + L ++ ++ I + +
Sbjct: 75 TFYIDKNNTIENLGSDTYKKELIKYVVYEDILYRK-AKEENIHVTKQEIEDTYCSVEKFI 133
Query: 110 ARNTGLSAEDF-SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
L +F + + D + ++ + + + A+K
Sbjct: 134 TSKFNLDDAEFKNKYADDKNKLVKSMRKSIKA----YKYLDEKTRVSDSEARAYYDAHKD 189
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC--NKLEKFASKI 226
K + R+ I TV K ++ + A E +L + C LE S+
Sbjct: 190 KFREGVYRDIFISTVD---SSGKKLSKEEIDNAENRANEIYRKLEEGCKFEDLEDEYSED 246
Query: 227 HDVSI-GKAQYLLESDLHPQFQNLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIA 283
+ +I G L S + +N + + P + G I + +
Sbjct: 247 IEGTIPGGLGDLEMSFTDQKLRNKISTLKVGECIEKPLRSAYGYHIIKRVGTEEEPFDKV 306
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKK 307
+ + + + K K +K+
Sbjct: 307 KE-EIKSMLSYKKQIKLIESLMKE 329
>gi|148264478|ref|YP_001231184.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
gi|146397978|gb|ABQ26611.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Geobacter
uraniireducens Rf4]
Length = 299
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 8/143 (5%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+R + F + K +A +L+ D + + +S+ D + G L
Sbjct: 142 VRHIYFEAAKDATPEVKEKAKAKAEAILKQLKEGADFAAVARASSEDADSASKGGDLGVL 201
Query: 238 LE--SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI---CDKRDLGGEIALKAYLSAQN 292
++ + T+ T G I + D+R + A Y+
Sbjct: 202 SPGKTNSKEFEKAAFALKAGETSPVVETPFGYHIIRVDERTDQRTASFDEAKD-YIRTTL 260
Query: 293 TPTKIEKHEAEYVKKLRSNAIIH 315
+K E++ KL A +
Sbjct: 261 KGQFEQKKAREFLDKLAKEAGLE 283
>gi|260665523|ref|ZP_05866369.1| protease maturation protein [Lactobacillus jensenii SJ-7A-US]
gi|260560644|gb|EEX26622.1| protease maturation protein [Lactobacillus jensenii SJ-7A-US]
Length = 304
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 72/236 (30%), Gaps = 29/236 (12%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ L + + ++ G V+ + + + G S F S L++ G
Sbjct: 49 SSQAGKSTLANMIIYRALKQQYGKKVTQKQVDKEYNAYKKQYGSS---FESALEQNGYTT 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ FK+ + + + +++ +QK + ++ +L
Sbjct: 106 SSFKKNIKTNLL--------TVAALKDIKKITSKQEQKAWKSYQPKVTVQHIL------- 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD--LHPQFQ 247
+K + +L+ L K S GK +D L F+
Sbjct: 151 -----VSKKSTAEDVIKQLKSGTSFATLAKKYSIDSATKNKGGKLTAFDSTDTTLDSDFK 205
Query: 248 NLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
K +N TT P TQ G E I + G K + Q + +
Sbjct: 206 TAAFKLKNGEYTTTPVKTQSGYEIIKMIKHPSKGKFSDHKKEIDEQIYQSMEQDTT 261
>gi|256852157|ref|ZP_05557543.1| protease maturation protein [Lactobacillus jensenii 27-2-CHN]
gi|260661810|ref|ZP_05862721.1| protease maturation protein [Lactobacillus jensenii 115-3-CHN]
gi|282933671|ref|ZP_06339030.1| foldase protein PrsA [Lactobacillus jensenii 208-1]
gi|256615203|gb|EEU20394.1| protease maturation protein [Lactobacillus jensenii 27-2-CHN]
gi|260547557|gb|EEX23536.1| protease maturation protein [Lactobacillus jensenii 115-3-CHN]
gi|281302204|gb|EFA94447.1| foldase protein PrsA [Lactobacillus jensenii 208-1]
Length = 302
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 70/238 (29%), Gaps = 33/238 (13%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ L + + ++ G V+ + + + G S F S L++ G
Sbjct: 49 SSQAGKSTLANMIIYRALKQQYGKKVSQKQVDKEYNAYKKQYGSS---FESALEQNGYTT 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ FK+ + + + +++ +QK + ++ +L
Sbjct: 106 SSFKKNIETNLL--------TVAALKDIKKITSKQEQKAWKSYQPKVTVQHIL------- 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES------DLHPQ 245
+K + +L+ L K S D + L + L
Sbjct: 151 -----VSKKSTAEDIIKQLKSGTSFATLAKKYST--DSATKDKGGKLAAFDSTDTTLDSD 203
Query: 246 FQNL-LKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
F+ K TT P TQ G E I + G K + Q + +
Sbjct: 204 FKTAAFKLKTGEYTTTPVKTQSGYEIIKMIKHPSKGKFSDHKKEIDEQIYQSMEQDTA 261
>gi|194366009|ref|YP_002028619.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas
maltophilia R551-3]
gi|194348813|gb|ACF51936.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas
maltophilia R551-3]
Length = 299
Score = 43.5 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 92/298 (30%), Gaps = 52/298 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
+S + R ++ I++ DI++ + + + + A + L+V L + E ++
Sbjct: 36 RSLGQPAPCRLFVDETAISEADIAREMQHHRAMR-PEQSRAEAARALVVRELLRLEAQRL 94
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ +S E+ L +Q + ++ + +
Sbjct: 95 GLQAPE------------GNRVSDEE---VLIQQ-LLEDAIEDRVPTDEDCRRYF----- 133
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ + + +R +L + P + + + + + P
Sbjct: 134 ------------EQNPERFRSPDRVRLRHILLAAPADDVAGRFAARTEGERLVGLLKESP 181
Query: 214 KDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIA 271
+ + G +L P+F + + + + P ++ G +
Sbjct: 182 HLFADFALRHSRCPSSSEGGDLGWLQRGQTTPEFDRQVFRLREGLAGFPVESRWGYHVVC 241
Query: 272 ICDKRDLGGEIALKAYL-----------SAQNTPTKIEKHEAEY----VKKLRSNAII 314
+ D R+ G +A L + + + + Y + ++ + A I
Sbjct: 242 V-DAREEGQPQPFEAVLPQLRDYLELQVRQREVQAYLLQLQERYPVRGLDEIDAEADI 298
>gi|307289621|ref|ZP_07569565.1| putative foldase protein PrsA [Enterococcus faecalis TX0109]
gi|306499435|gb|EFM68808.1| putative foldase protein PrsA [Enterococcus faecalis TX0109]
gi|315164537|gb|EFU08554.1| putative foldase protein PrsA [Enterococcus faecalis TX1302]
Length = 362
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ K + +L + + S + + S+ T+ G IT D +I
Sbjct: 15 TGVHKRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------E 67
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ A +++ K E EK G + F + FS L + G+
Sbjct: 68 QSTSQQAFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 124
Query: 130 GDNHFKQYLA 139
+ FK+ L
Sbjct: 125 TEKSFKKQLK 134
>gi|170736613|ref|YP_001777873.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
gi|169818801|gb|ACA93383.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
Length = 278
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 84/303 (27%), Gaps = 42/303 (13%)
Query: 20 FVLIIFCIVPIVSYKSWAMSS-----RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
V+ + C + S + + + +N I D+ ++ L
Sbjct: 10 AVIALVCATGMTSVVAAEAGTATLPKGVVAVVNNMPIAQSDVDAIVSASGQADTPA-LRD 68
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
++LIV L +Q +K+ V + +A+ +
Sbjct: 69 AVKRDLIVRQLVEQAADKANYG-SRPEVQGIVSR--ARANAAADLY-------------L 112
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ L Q + VK + + N EY V + P
Sbjct: 113 RDALGAQRVTDAQVKAHY--------------DYIVANAAQFEYRAEVVAVADPAKANAA 158
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
+++ ++ + +++ ++ G+ L P Q +
Sbjct: 159 AAELKQGAAFDTVAKKYNTTANGGVAEWSELKTPLAEGRTGGLPM----PLAQAMTSLKP 214
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P ++ + DKR + K L Q + V KL + A
Sbjct: 215 GAVSGPIRIGNAYAFVKLDDKRPVVVPSFDKAKGVLRQQLEQQARQSAMTALVDKLAAQA 274
Query: 313 IIH 315
I
Sbjct: 275 TIQ 277
>gi|116627350|ref|YP_819969.1| protease maturation protein precursor [Streptococcus thermophilus
LMD-9]
gi|116100627|gb|ABJ65773.1| Parvulin-like peptidyl-prolyl isomerase [Streptococcus thermophilus
LMD-9]
Length = 380
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 13/127 (10%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
L+ ++ VS + I ++ G+ +T GD+ L+ N
Sbjct: 74 LVLVAVSALVGAGAMYVSLGNKTTEETILVSMKGDTVTVGDV-----FNSLKGSN----- 123
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
Q ++ TL+K ++ G V+ + Q + G + FS L G + +
Sbjct: 124 QTQQSVLSATLQKVLEKEYGSKVSKEDVDKAYKQASEQYG---DQFSQVLAAYGQTEESY 180
Query: 135 KQYLAIQ 141
+ + Q
Sbjct: 181 RTQIRTQ 187
>gi|303257878|ref|ZP_07343887.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales
bacterium 1_1_47]
gi|302859221|gb|EFL82303.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderiales
bacterium 1_1_47]
Length = 645
Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQY 236
+L + N+ Q AE+ + D +K + A + S G +
Sbjct: 276 HILIAPDANEADKAKADQDAKAKAEKILAEVKADPSKFAQLAKENSADPGTAESGGDLDF 335
Query: 237 LLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ + P+F + + ++ P T+ G I + D
Sbjct: 336 FTQGQMVPEFDKAVFGAKKDEIVGPVKTEFGYHIIHVTDI 375
>gi|293385010|ref|ZP_06630844.1| foldase protein PrsA [Enterococcus faecalis R712]
gi|293389280|ref|ZP_06633742.1| foldase protein PrsA [Enterococcus faecalis S613]
gi|312905999|ref|ZP_07765012.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 512]
gi|312909345|ref|ZP_07768201.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 516]
gi|291077688|gb|EFE15052.1| foldase protein PrsA [Enterococcus faecalis R712]
gi|291081444|gb|EFE18407.1| foldase protein PrsA [Enterococcus faecalis S613]
gi|310627994|gb|EFQ11277.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 512]
gi|311290369|gb|EFQ68925.1| putative foldase protein PrsA [Enterococcus faecalis DAPTO 516]
Length = 362
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
+ K + +L + + S + + S+ T+ G IT D +I
Sbjct: 15 TGVHKRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------E 67
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ A +++ K E EK G + F + FS L + G+
Sbjct: 68 QSTSQQAFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGL 124
Query: 130 GDNHFKQYLA 139
+ FK+ L
Sbjct: 125 TEKSFKKQLK 134
>gi|282880884|ref|ZP_06289577.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1]
gi|281305266|gb|EFA97333.1| PPIC-type PPIASE domain protein [Prevotella timonensis CRIS 5C-B1]
Length = 475
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 77/262 (29%), Gaps = 45/262 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE--- 79
++ ++ S I TING+ I + G ++K +V E
Sbjct: 5 LLAVMLACCSLVLAQQDDPILMTINGKNIHRSEFEYSYN---KNNAEGVIDKKSVDEYVD 61
Query: 80 -LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ-Y 137
I LK E++ + + F ++
Sbjct: 62 LFINYQLKVIAAEEARLD-------------------TLSSFKKEFA-------MYRDAQ 95
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
+ I V+ Y + A+ +K + +L ++ +
Sbjct: 96 IKPTMITDADVEQKAHEIYQQTANRVNASGGLVK--------VSHILIALKQTAGEVDRR 147
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQ 254
+ ++ D+ L + +L K S + G+ +L +F + + +
Sbjct: 148 IAEQRADSVYRALCKGANFGELAKRVSDDRASASRGGELPWLERGQTLEEFDKAIFSMKK 207
Query: 255 NNTTNPYVTQKGVEYIAICDKR 276
+ P T G I + DKR
Sbjct: 208 GELSKPVQTPAGYHIIFLKDKR 229
>gi|313636768|gb|EFS02420.1| foldase protein PrsA [Listeria seeligeri FSL S4-171]
Length = 116
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 51/128 (39%), Gaps = 17/128 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + ++ + S + S + T G+V T ++ + + K + N ++++
Sbjct: 1 MKKKMILGLVMLMAMFSLAACGGGSDVVKTDAGDV-TQDELYEAM---KDKYGNEFVQQL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++++ + K V+ F ++ G + F + L + G+ + FK
Sbjct: 57 TFEKILGDKYK----------VTDEQVDSEFKKYKSQYG---DQFDAVLAQSGLTEETFK 103
Query: 136 QYLAIQSI 143
L +
Sbjct: 104 SQLKYNML 111
>gi|126662091|ref|ZP_01733090.1| peptidyl-prolyl cis-trans isomerase (survival protein)
[Flavobacteria bacterium BAL38]
gi|126625470|gb|EAZ96159.1| peptidyl-prolyl cis-trans isomerase (survival protein)
[Flavobacteria bacterium BAL38]
Length = 451
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 34/323 (10%), Positives = 99/323 (30%), Gaps = 37/323 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + +L + I + D + + L+ ++
Sbjct: 1 MKFINKRILLALLFITSTAVFAQPKKVKVDGVVGVVGDYVVLDSDIDLDYITLKAQGVDV 60
Query: 73 EKIAVQEL----IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ I EL + + L + I VN F E + +++ G
Sbjct: 61 KNITRCELFGKQLEDRLYAHHAIQDSIIVTDAEVNSFLN----------EQLDAAVEQIG 110
Query: 129 -----------IGDNHFKQYLAIQSIWPDV---VKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ + + ++ + E+ + +
Sbjct: 111 SIDKVVKYYNKKNVEELRSHFFDAVKMNKLTDQMQKKILESVEITPEEVRNFFKGIPADE 170
Query: 175 VR----EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
+ E + ++ + + + + + K + + + + +K F+ S
Sbjct: 171 IPTFGAEMEVAQIVVNPVVGEDEKKRVIDK-LNEIRQDVINGSSFFSKAVLFSEDPGSSS 229
Query: 231 IGKAQYL-LESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
G + ++ +F+++ ++ + P+ T+ G I + + G E+ L+ L
Sbjct: 230 NGGFYKMNRKTAFVKEFKDVAFSLAEGEISEPFETEFGYHIIKVEKIK--GQEVELRHIL 287
Query: 289 SAQNTPTKIEKHEAEYVKKLRSN 311
+ + K E ++++R+
Sbjct: 288 ISPKVSIQAMKDAKEKIEQIRNK 310
>gi|310817118|ref|YP_003965082.1| PPIc-type PPIase domain protein [Ketogulonicigenium vulgare Y25]
gi|308755853|gb|ADO43782.1| PPIc-type PPIase domain protein [Ketogulonicigenium vulgare Y25]
Length = 297
Score = 43.5 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 77/279 (27%), Gaps = 60/279 (21%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ----ELIVETLKKQ 88
+ + ++NG IT G++ LL + + ++ L+ + +++Q
Sbjct: 32 APAAPTRDTVIASVNGTDITLGEM-----LLAYSALPQQYRQLPADVLLPSLVDQMVQQQ 86
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
+ + V R LS E L + D
Sbjct: 87 LLAEQVTEV-PAAVEMALAN-QRRELLSYEAVQDLLADA-VTDETL-------------- 129
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
+ ++ EY +L + DA +
Sbjct: 130 -------------QAAYDRAFDGVTPGNEYSAAHIL------------VATQEEADAVIA 164
Query: 209 RLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNN----TTNPY 261
RL +D + + S + G+ + + F N +++ + + P
Sbjct: 165 RLNAGEDFATVAQELSLDTGSGAAGGELGWFAPEMMVEPFANAVVELGEAGQFDTLSAPI 224
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+Q G I + + R + A + + +
Sbjct: 225 ESQFGFHIITVHEARPQS--LPTIAEIRTELEGQVRQDT 261
>gi|332971823|gb|EGK10770.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp.
1501(2011)]
Length = 624
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 50/384 (13%), Positives = 100/384 (26%), Gaps = 87/384 (22%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALL 63
L + + L I+ + SY + + ++ T+ + IT + +R LL
Sbjct: 8 LQSWPGRIFLMLCLSPLVILGLESYFTGSANANDVATVGDQTITRAEYQDAINTRRNELL 67
Query: 64 KLQKINGELEKIAVQE-----LIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGL 115
+ + A+ LI L + + + G+ +N Q G
Sbjct: 68 QNGVEASAINTNALNREVLKGLINRALLRNQSGQLGMHVSDKVINDLLLQDPQFLDENGQ 127
Query: 116 -SAEDFSSFLDKQGIGDNHFKQYLAIQS-------------------------------- 142
S + F+ L +QG+ + Q
Sbjct: 128 FSNDRFAFSLQQQGMTKDQLFDQYRQQLNLMQLYAGVAQTAIYPESEINDLLALQLETRD 187
Query: 143 IWP-DVVKNDFMLKYGNLEMEIPA------------------------NKQKMKNITVRE 177
+W + + K EI K + +T +E
Sbjct: 188 VWVYRLPWEQYKDKVSVSAKEIENYYNEHKNDLNSVAMVDLAYIQLDPAKVAVDKVTEKE 247
Query: 178 YLIRTVLFSIPDNKLQNQGFVQ------KRIKDAEESRLRLPK--DCNKLEKFASK--IH 227
+ F NQ Q K + ++ + RL + L K S+ I
Sbjct: 248 IQAQYDAFKANYKGAANQKLSQILITGDKAEQTIQQIQKRLKQGESFAALAKQYSEDPIS 307
Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQN----NTTNPYVTQKGVEYIAICDKRDLGGEIA 283
G + K + + P T G + + + G +
Sbjct: 308 AAKGGDIGTFNPDVFGADGAKVAKAIEGLNKDQISAPVKTSFGYQLFKVTEM--SGDSVP 365
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKK 307
A + + + + +
Sbjct: 366 SLASMREELVAQAQRQKREQLIAD 389
>gi|260654850|ref|ZP_05860338.1| putative fibrous sheath CABYR-binding protein [Jonquetella anthropi
E3_33 E1]
gi|260630565|gb|EEX48759.1| putative fibrous sheath CABYR-binding protein [Jonquetella anthropi
E3_33 E1]
Length = 570
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 83/252 (32%), Gaps = 24/252 (9%)
Query: 2 TSKVFTSLSDFIKLLTTYFVLIIFCIVPIV------SYKSWAMSSRIRTTINGEVITDGD 55
++ + TSL IK + F++ +P++ K+ + + +I+G +
Sbjct: 5 STVILTSLRTQIKWILVAFLVAFGLSIPLMYGVGRHDEKNKGVRDHVVASIDGREYKLSE 64
Query: 56 I-------SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ ++R + Q+ + + + L + + I++ GI VN Q
Sbjct: 65 LHKAMQGFAERNNIKLTQENLPAVYQQTLDSLATQIALDKAIKERGIEPTEAQVNEQLKQ 124
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
++ E F + L G K LA ++ + A
Sbjct: 125 LEVQY-VTKEAFLANLRATGSSLEQVKANLAHDLAVRQLL----------TQESESATVD 173
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+ ++ + + + + R K+A E+ L K + A K D
Sbjct: 174 DQQVKSLYDLFVTMKQPMVYRPSGVEGHHAEFRTKEAAEAFLAAVKAGEDWKTAADKAGD 233
Query: 229 VSIGKAQYLLES 240
IG + S
Sbjct: 234 NKIGSTDGKMTS 245
>gi|184157984|ref|YP_001846323.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ACICU]
gi|332874443|ref|ZP_08442346.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059]
gi|183209578|gb|ACC56976.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Acinetobacter baumannii ACICU]
gi|323517928|gb|ADX92309.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter baumannii TCDC-AB0715]
gi|332737287|gb|EGJ68211.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii 6014059]
Length = 621
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 32/154 (20%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +L++F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----- 105
R L + G+ ++ A+ L+ L Q+ EK GI+ + +
Sbjct: 61 RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSNAQIEQMLAQQP 120
Query: 106 ------------FVQHARNTGLSAEDFSSFLDKQ 127
+ + R+ G+++E + L +
Sbjct: 121 SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQD 154
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 245 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 305 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 358
>gi|54288331|gb|AAV31619.1| predicted parvulin-like peptidyl-prolyl isomerase [uncultured alpha
proteobacterium EBAC2C11]
Length = 289
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 86/308 (27%), Gaps = 51/308 (16%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIALLKLQKINGE 71
+ T F+ +I + + + T+NGE I D+ ++ L +
Sbjct: 5 IFTHQFICLIAGATLLAGTTNMVQADEDRIPVGTVNGETIWLDDVMRQAERLPAKFRQAP 64
Query: 72 LEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+E V ++I + + + A L +
Sbjct: 65 MESYFNQLVTDMIDSKIAADAARAAKYD-TKKEIASAMKTAADR----------VLAESW 113
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
IG+ I DV Y + + +Q +L +
Sbjct: 114 IGEK----------ISGDVTDAAIEKAYKTFVADTASREQ---------VTAAHILVATE 154
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
D + + AE +R + ++ + G + P F+N
Sbjct: 155 DEAKKIIASLAGGADFAELARSK-----------STGPSGPNGGSLGKFGRGQMVPAFEN 203
Query: 249 LLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
++ TT P TQ G I + K + Q T + ++
Sbjct: 204 AAFALEDGKITTQPVQTQFGWHVIKVESKEIAPAPTIED--MREQLVQTLSTQALGRVLE 261
Query: 307 KLRSNAII 314
+LR+ I
Sbjct: 262 ELRAKQEI 269
>gi|193214213|ref|YP_001995412.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton
thalassium ATCC 35110]
gi|193087690|gb|ACF12965.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chloroherpeton
thalassium ATCC 35110]
Length = 699
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 254 QNNTTNPYVTQKGVEYIAICDK-RDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ +NP T++GV + K + + K L Q K ++ ++K L+ +
Sbjct: 631 EGKVSNPIETKRGVAIAELTKKIKGFDSDFEVRKNALKDQILQEKKKEVMNNWLKDLKES 690
Query: 312 AIIH 315
A I
Sbjct: 691 AKIE 694
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 40/145 (27%), Gaps = 12/145 (8%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGK 233
R+ +L P+ + L + ++ + S + G
Sbjct: 341 RQAHASHILLK-PEGARRADTLAVMAEAKQLMRELTSDEKFAEVAREKSDDPGSAQKGGD 399
Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
+ + + +F++ + P +Q G+ I + D + +
Sbjct: 400 LGWFGKGRMVKEFEDAVFHAKPGQIVGPIQSQFGIHIIKVHGFED-RAIRGAELVRKIKA 458
Query: 293 TPTKIEKHEAEYVKKLRSNAIIHYY 317
P +E+ R Y+
Sbjct: 459 GPATLERVN-------RQADEFQYF 476
>gi|77407178|ref|ZP_00784161.1| rotamase family protein [Streptococcus agalactiae H36B]
gi|77174213|gb|EAO77099.1| rotamase family protein [Streptococcus agalactiae H36B]
Length = 295
Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 19/198 (9%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET 84
+ + + + T+ G+ IT D ++ K A Q ++
Sbjct: 1 MSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVK----------TSKAAQQSMLTLI 50
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
L + + G V+ + + A+ G S FSS L + G+ +KQ + +
Sbjct: 51 LSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNS---FSSALSQAGLTPEGYKQQIRTTML- 106
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
++ +K + AN ++ E ++ + D V+ D
Sbjct: 107 -----VEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAEDKAKSVLKDVKADGAD 161
Query: 205 AEESRLRLPKDCNKLEKF 222
+ +K ++
Sbjct: 162 FAKIAKEKTTATDKKVEY 179
>gi|304382090|ref|ZP_07364601.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973]
gi|304336688|gb|EFM02913.1| peptidyl-prolyl cis-trans isomerase [Prevotella marshii DSM 16973]
Length = 473
Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 6/132 (4%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK--IHDVSIGKAQYLLE 239
+ +P N + K+ D+ + LR D L + S+ + G +
Sbjct: 131 HIFIRVPQNAPKEALDRAKQRIDSIYAALRGGADFATLAEKYSEDPMSARQGGALPWFAP 190
Query: 240 SDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTK 296
+ F + + T P ++ G I + D++ + E+ + + +
Sbjct: 191 GETLEDFEKTAYRLKTGETAPPMLSFAGYHIIRMLDRKQMEPFDELKADIIRALKTRNIR 250
Query: 297 IEKHEAEYVKKL 308
EK E +K++
Sbjct: 251 -EKIADERLKEM 261
>gi|332665904|ref|YP_004448692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter
hydrossis DSM 1100]
gi|332334718|gb|AEE51819.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Haliscomenobacter
hydrossis DSM 1100]
Length = 656
Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 9/151 (5%)
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI--RTVLFSIPDNKLQNQGF 197
+Q + ++ L L + K + +Y + +LF++P
Sbjct: 85 VQVLQEELAGYRRQLADSYLLNKQVTEKLTKELFERSQYDLDISHILFALPAEAKGADTV 144
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL----LK 251
R +RL +D + K S + G ++ + F L +
Sbjct: 145 STFRQAMEVRARLLKGEDFATIAKQVSADKSAATNGGNIGFVT-AMFPNGFYPLESVAYR 203
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
S + + P T G + + KR GE+
Sbjct: 204 SSFDQVSMPVRTSVGYHLVKVHSKRPARGEV 234
>gi|294672824|ref|YP_003573440.1| peptidylprolyl isomerase domain-containing protein [Prevotella
ruminicola 23]
gi|294472529|gb|ADE81918.1| peptidylprolyl isomerase domain protein [Prevotella ruminicola 23]
Length = 477
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 72/204 (35%), Gaps = 20/204 (9%)
Query: 93 SGITFDSNTVNYFFVQHARNT---GLSAEDF-----------SSFLDKQGIGDNHFKQYL 138
+G+ + Y + ++ LS +++ ++ LD + + F+Q
Sbjct: 32 AGVPVSRSEFEYSYNKNNGEGVIDKLSVDEYVTLFINYKLKVAAALDAKLDTLSSFRQE- 90
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI-RTVLFSIPDNKLQNQGF 197
Q V+ + L+ ++ I + + +L + Q
Sbjct: 91 -YQMYRDQQVRPTMVTDAEVLDQARQMYERTQAMIGSKGLVRPAHILLKLSTQATVQQQE 149
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG--KAQYLLESDLHPQFQNL-LKKSQ 254
+ D+ L+ D +L K S+ ++ + ++ S +F+++ +
Sbjct: 150 KIHQRIDSVYRALQAGADFAELAKKVSEDTGSAVRGGELPWIAPSQTLKEFEDVAYSLAP 209
Query: 255 NNTTNPYVTQKGVEYIAICDKRDL 278
+ P+++ G I + +++ L
Sbjct: 210 GQLSQPFLSPVGYHIILMKERKQL 233
>gi|322418770|ref|YP_004197993.1| Dcu family anaerobic c4-dicarboxylate antiporter [Geobacter sp.
M18]
gi|320125157|gb|ADW12717.1| anaerobic c4-dicarboxylate antiporter, Dcu family [Geobacter sp.
M18]
Length = 546
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 82/281 (29%), Gaps = 44/281 (15%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKINGELEKIA 76
Y VL + V + I + + IT I+ +ALL L G K
Sbjct: 109 AYSVLPVIAEVARETGVRPERPMSIAVIASQQAITASPIAAATVALLGLL--GGSAAKFG 166
Query: 77 VQ-ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
ELI LK + S + N LDK ++
Sbjct: 167 FNVELID-ILK--------VCIPSTLMGVLIAAFISN------KLGKDLDK---DPE-YQ 207
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI-------- 187
Q L + P E N + V +L+ T+L +
Sbjct: 208 QRLKEGLVPPP----RSSSSDTAKVNEAIRNTPASAKVAVALFLVGTILVVLFGSFPQLR 263
Query: 188 PDNKLQNQGFVQKR--IKDAEE----SRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLES 240
P+ + N + + E ++L+ + + + S + G + +
Sbjct: 264 PEWSVGNDTRISHIVVRSETEAKQVLAQLKSGGSFSDVARQCSIDATAGTGGDLGWQAKG 323
Query: 241 DLHPQFQNLLKK--SQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ P+F+ K + T + G + +KR
Sbjct: 324 KMLPEFEKACAKLKKPGDLTEVIKSPFGYHVVKFDEKRPAQ 364
>gi|226355421|ref|YP_002785161.1| Trigger factor, TF [Deinococcus deserti VCD115]
gi|259533566|sp|C1D0N3|TIG_DEIDV RecName: Full=Trigger factor; Short=TF
gi|226317411|gb|ACO45407.1| putative Trigger factor (TF) [Deinococcus deserti VCD115]
Length = 438
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 11/109 (10%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ E ++L +E L E + N A+ GLS E S L G
Sbjct: 333 SKNAETRVKRDLALEKL----AEDLKVQVSDAEFNQTMTMLAQANGLSPEQLSKQLGPNG 388
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
I N + + + + + + E A Q + +E
Sbjct: 389 I--NSYYASIVRERALQQA-----LAQLSGPQAETVAADQGEQQAEGQE 430
>gi|53722410|ref|YP_111395.1| rotamase [Burkholderia pseudomallei K96243]
gi|52212824|emb|CAH38856.1| putative rotamase [Burkholderia pseudomallei K96243]
Length = 244
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 49/160 (30%), Gaps = 15/160 (9%)
Query: 152 FMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
F E +I A + + EYL+ + + R+++
Sbjct: 91 FFSAVSVDEDDIGAAYARIKSKLGTTEYLLSIL--------TVSGEADALRLRNQLIQGA 142
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEY 269
+F++ S G ++ + L +N + ++ + P G
Sbjct: 143 SFG---ELAMRFSTDASRDSGGDIGWVAQGVLSDVARNEIDAIVKSGFSMPIRGSNGYHL 199
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + DKRD+ + Q ++ +LR
Sbjct: 200 LYVRDKRDIVA--PSLDQIREQLIELARVDKFERHLCELR 237
>gi|313675957|ref|YP_004053953.1| ppic-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa
DSM 4126]
gi|312942655|gb|ADR21845.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marivirga tractuosa
DSM 4126]
Length = 713
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 58/185 (31%), Gaps = 22/185 (11%)
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPAN------KQKMKNITVREYLIRTVLFSIPDN 190
+ A Q ++P + + G + K K T+ I ++ P
Sbjct: 190 FTAFQMVYP-FESAAYQTEVGEISPITRTQFGYHIIKVNDKRETLGRIKIAHIMKRFPPQ 248
Query: 191 KLQNQGF-----VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
++K + + E ++K + G + L
Sbjct: 249 ASSEDSLQTEKELKKIYEQLNSGENWFILATKESEDLSTKDNG---GSLPWFGAGRLPAS 305
Query: 246 FQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + + + + + P + G + + DKR +G ++ ++++ +
Sbjct: 306 LETVAFELEEKGDISKPVESPYGWHILKLEDKRGVGS-----LESMEESLSRRVQRDQRS 360
Query: 304 YVKKL 308
+K++
Sbjct: 361 ELKEV 365
>gi|311070875|ref|YP_003975798.1| putative lipoprotein [Bacillus atrophaeus 1942]
gi|310871392|gb|ADP34867.1| putative lipoprotein [Bacillus atrophaeus 1942]
Length = 257
Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKING-----------ELEKIAVQELIVETLKKQEIE 91
+N E +T D + + + Q +++K + L+ +TL QE
Sbjct: 69 VAIVNNEKLTGSDYNSVLTSAQTQYQQSGQDPTSKDAAKQIKKQTINSLVGQTLLLQEAN 128
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K G V+ + + S ++F++ L K G+ K LA + V+ +
Sbjct: 129 KKGYKASDKEVDKQLAESKKQYK-SDKEFNAALKKAGLNTTKLKSELADNIKYEKYVEKE 187
Query: 152 FMLKYGNLEMEI 163
+ K + E+
Sbjct: 188 -VPKDKVTDKEV 198
>gi|89901568|ref|YP_524039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
gi|89346305|gb|ABD70508.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
Length = 263
Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 47/153 (30%), Gaps = 16/153 (10%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH------ 227
T +R +LF++ + + +R ++FA
Sbjct: 101 TGERIEVRHILFAVTQG---VDVVALRNRAETTLLDVRCHDGTGAEDRFAKAASTLSNCP 157
Query: 228 -DVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G +L+ +D P+F L ++ G+ + + R+ G E
Sbjct: 158 SGAQGGHLGWLVAADCAPEFAKELFGHTEVGVLPRLVHSRFGLHVVEVLA-REPGAEQPF 216
Query: 285 KAY---LSAQNTPTKIEKHEAEYVKKLRSNAII 314
+A ++ +Y++ L A I
Sbjct: 217 EAVRGAVAMSLRQKTYVTALRQYLQLLAGQADI 249
>gi|253689250|ref|YP_003018440.1| type III restriction protein res subunit [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755828|gb|ACT13904.1| type III restriction protein res subunit [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 1137
Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQSELDELAKLVLIQNPNVDIRALKEFYPQATSSL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|55820539|ref|YP_138981.1| protease maturation protein [Streptococcus thermophilus LMG 18311]
gi|55822430|ref|YP_140871.1| protease maturation protein precursor [Streptococcus thermophilus
CNRZ1066]
gi|55736524|gb|AAV60166.1| protease maturation protein precursor [Streptococcus thermophilus
LMG 18311]
gi|55738415|gb|AAV62056.1| protease maturation protein precursor [Streptococcus thermophilus
CNRZ1066]
Length = 371
Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 14/136 (10%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPI-VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
+S + F++ L V + + VS + I ++ G+ +T GD+ L
Sbjct: 56 SSGAPFLRGLALVAVSALVGAGAMYVSLGNKTTEETILVSMKGDTVTVGDV-----FNSL 110
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
+ N Q ++ TL+K ++ G V+ + Q + G + FS L
Sbjct: 111 KGSN-----QTQQSVLSATLQKVLEKEYGSKVSKEDVDKAYKQASEQYG---DQFSQVLA 162
Query: 126 KQGIGDNHFKQYLAIQ 141
G + ++ + Q
Sbjct: 163 AYGQTEESYRTQIRTQ 178
>gi|218673531|ref|ZP_03523200.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli GR56]
Length = 293
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 100/313 (31%), Gaps = 60/313 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + + V++++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKFALLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I +K + D + + +L + + +
Sbjct: 61 KKVAALSAAID--VKLLAADAITEKLDQTE------EFKKRM--------QYLSDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + ++ P+ +K + + E+ A E R +L D
Sbjct: 105 AYFKKHV-VDTVTPEEIKARY-------DKEVAAL------PKQEEVHARHILVKTEDEA 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + KD +L K S + S G Y + +F++
Sbjct: 151 KEIIKQLDA------------GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQNTPTKIEKHE 301
+ + P T G I + DKRD + + + + +
Sbjct: 199 FALEKGTYSKTPVKTDFGYHVIKVEDKRDAPPPPFDQVQDQVRQLVMRDKYLALLNQAKT 258
Query: 302 AEYV----KKLRS 310
+ + + LR
Sbjct: 259 SAKIEITDETLRK 271
>gi|170733279|ref|YP_001765226.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
gi|169816521|gb|ACA91104.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
Length = 645
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 24/169 (14%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING-----------EL 72
V I ++ + S +NG IT + D + R + + ++ G E
Sbjct: 25 GFVGIQGFRGFFDDSANVAAVNGHKITRVEFDGAFRQQIDQARQALGGQFDIKMFDTPEH 84
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG----LSAEDFSSFLD 125
K + LI + + E + +T N V + A + E ++ L
Sbjct: 85 RKQVLDGLIQQRVLADETQHLHLTASDNAVRDALMSDPMIASLKKPDGTIDVERYAQLLS 144
Query: 126 KQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEMEIPANKQKM 170
QG+ +++ + +V + F K + A +Q+
Sbjct: 145 FQGMTPEQYQERVRYSLSLQQIPASIVSSAFTPKSLAQRLSELAAQQRE 193
>gi|261496293|ref|ZP_05992697.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261308055|gb|EEY09354.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
OVINE]
Length = 623
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 36/348 (10%), Positives = 86/348 (24%), Gaps = 85/348 (24%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD-------------GDISKRIA 61
+ F L+ V +NGE I+ ++
Sbjct: 13 VFKIIFALVSISFVIGGIGTGLISQDNSVAKVNGEEISQQLFNNTLNREQNRLNVELGSR 72
Query: 62 LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
L + + + LI E L +Q ++ + ++ + V ++
Sbjct: 73 FWDLMDSPEYAAQFNQSVLNGLIDEELLRQYAKELKLGISADQIKSEIVNSQMFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------------------V 148
S E + L + + + + + + V
Sbjct: 133 SNELYQQTLRHNNLSADGYAAIVQEGMLQSQLQEGIINSDFNVPAQQALLAKLLLQQREV 192
Query: 149 K------NDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ M E E+ A + K + E L + P + ++
Sbjct: 193 RLAEFSVAKEMENQTASEQELRAYYEANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQ 252
Query: 202 IK-------------------------DAEESRL----RLPKDCNKLEKFASK--IHDVS 230
I+ +AE + + +D L K S + +
Sbjct: 253 IQTYYDRNKADYVTKGEAHLAHIQVASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANN 312
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
G + F++ + + + I + +++
Sbjct: 313 GGDLGWAKAGTFPKAFEDAVANLTAGQMSAAVKVDNAYHIIKVLERKP 360
>gi|251794076|ref|YP_003008807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
JDR-2]
gi|247541702|gb|ACS98720.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
JDR-2]
Length = 368
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 85/271 (31%), Gaps = 24/271 (8%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK------- 87
+ A + T +T+ + +K + + + + G + IA+ + + L++
Sbjct: 46 AGAGKGTVVATYKDGTVTEAEFNKYLDIFNIMQ-PGYEQVIAIPQFKEQLLQQFVSYKIL 104
Query: 88 -QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
++ ++ + + N + D LD + + + YL +
Sbjct: 105 AKQATEATLKKADDETNDQMKSFEDTLK-TNADVKKTLDDKKVSTADVRTYLNLML---- 159
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
VV K + EM+ K V +R +L + D + K A
Sbjct: 160 VVVEHMNSKVTDDEMKAEYEKNIGNYNPVT---VRHILVATTDPADSTKTLRTKEEALAR 216
Query: 207 ESRLRLPKDCN-KLEKFASKIHDVSI-----GKAQYLLESDLHPQFQNL-LKKSQNNTTN 259
+ D A + D + G+ + SD F+N L + +
Sbjct: 217 AKEAKAKLDAGGDWTALAKEYSDDTGSKDSGGEYKDAKASDWVEGFKNAALTQPVGKIGD 276
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
P T+ G I + + + +
Sbjct: 277 PVETEYGYHVILVEKRDQVTYDKITDEQKQE 307
>gi|301594637|ref|ZP_07239645.1| PPIC-type PPIASE domain protein [Acinetobacter baumannii AB059]
Length = 606
Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 28/136 (20%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGE----- 71
L +V I Y + + + T+NG+ I+ D+ +R L + G+
Sbjct: 4 LFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQRYKEQYLAAVKGDESLLN 63
Query: 72 ---LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHAR 111
++ A+ L+ L Q+ EK GI+ + + + R
Sbjct: 64 LPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQQPSLQENGQFSQKLYENYLR 123
Query: 112 NTGLSAEDFSSFLDKQ 127
+ G+++E + L +
Sbjct: 124 SIGMTSEGLIASLRQD 139
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 230 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 289
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 290 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 343
>gi|261493077|ref|ZP_05989616.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261311256|gb|EEY12420.1| peptidylprolyl isomerase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 623
Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 37/348 (10%), Positives = 89/348 (25%), Gaps = 85/348 (24%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI---------------TDGDISKR 59
+ F L+ V +NGE I + ++ R
Sbjct: 13 VFKIIFALVSISFVIGGIGTGLISQDNSVAKVNGEEISQQLFNNTLNREQNRLNAELGSR 72
Query: 60 I-ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
L+ + + + + LI E L +Q ++ + ++ + V ++
Sbjct: 73 FWDLMDSPEYAAQFNQSVLNGLIDEELLRQYAKELKLGISADQIKSEIVNSQMFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------------------V 148
S E + L + + + + + + V
Sbjct: 133 SNELYQQTLRHNNLSADGYAAIVQEGMLQSQLQEGIINSDFNVPAQQALLAKLLLQQREV 192
Query: 149 K------NDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ M E E+ A + K + E L + P + ++
Sbjct: 193 RLAEFSVAKEMENQTVSEQELRAYYEANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQ 252
Query: 202 IK-------------------------DAEESRL----RLPKDCNKLEKFASK--IHDVS 230
I+ +AE + + +D L K S + +
Sbjct: 253 IQTYYDRNKADYVTKGEAHLAHIQVASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANN 312
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
G + F++ + + + I + +++
Sbjct: 313 GGDLGWAKAGTFPKAFEDAVANLTAGQMSAAVKVDNAYHIIKVLERKP 360
>gi|171779578|ref|ZP_02920534.1| hypothetical protein STRINF_01415 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281680|gb|EDT47114.1| hypothetical protein STRINF_01415 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 352
Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 81/300 (27%), Gaps = 41/300 (13%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
S K ++ + + ++ T+ G IT D K
Sbjct: 15 SKAFKGVSIAVASALIGAGVTYLATNNNSETKALVTMKGNTITVSD------FYNAAKST 68
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++ + ++ + Q G V + A + G S F S L G+
Sbjct: 69 SSSQQTMLNLVLSRVFEDQ----YGDKVSDKDVTKAYNTTASSYGSS---FPSALQAAGL 121
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT--VLFSI 187
+ +KQ + +++Y E K ++Y T + ++
Sbjct: 122 TTDTYKQQIRTSM----------LVEYAVKEAAKDKLTTKNYKDAYKDYNADTTATVIAL 171
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
D N Q A+ ++ K ++ + A L SD+
Sbjct: 172 TDEDKANSVHNQATADGADFDKIAKENTTAKKTEY-------TFDSADTKLPSDV---MA 221
Query: 248 NLLKKSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
K+ + + ++ + K + + + K +
Sbjct: 222 AAFKQDEGSVSDVIKVMNSSTYSYTYYIVKTTKKTEKNADWKTYKKRLKKIIMAKYQNDT 281
>gi|260103202|ref|ZP_05753439.1| peptidylprolyl isomerase [Lactobacillus helveticus DSM 20075]
gi|260082993|gb|EEW67113.1| peptidylprolyl isomerase [Lactobacillus helveticus DSM 20075]
Length = 306
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 32/263 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 47 ITQQQYYDEMKKSQAGKSALA-NMIINRALEQQ----YGKYVSSKKVDKKYSNYKKQYG- 100
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FKQ L + +K + + + E A K +T
Sbjct: 101 --SQFSAVLQQNGMTASTFKQNLKTNLLSEAALK---HINKISKKQEQQAWKNYQPKVT- 154
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L + K + K++KD + + K GK
Sbjct: 155 ----VQHILVA----KKSTAESIIKQLKDGKSFKSLAKKYSLDTATKNKA------GKLP 200
Query: 236 YLLESD--LHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+D L F+ K T +P +Q G I + G K + +
Sbjct: 201 AFDSTDNTLDSAFKTAAFKLKTGEVTESPVKSQSGYHVIKMISHPAKGKFADHKKAIDDE 260
Query: 292 NTP--TKIEKHEAEYVKKLRSNA 312
+ + + + + NA
Sbjct: 261 IYASMAQDQAVMKDVIATVLKNA 283
>gi|300775367|ref|ZP_07085229.1| possible peptidyl-prolyl cis-trans isomerase [Chryseobacterium
gleum ATCC 35910]
gi|300506107|gb|EFK37243.1| possible peptidyl-prolyl cis-trans isomerase [Chryseobacterium
gleum ATCC 35910]
Length = 717
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 19/189 (10%)
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K + V F Y ++ + + + L R +L + +
Sbjct: 306 PPTIKDQIT-----SAAVGQTFGP-YKEQDVYVVSKLVGKRPSDST--LSRHILIAFKGS 357
Query: 191 KLQNQ--GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD----VSIGKAQYLLESD-LH 243
++ K A+ + K +F D G +
Sbjct: 358 PAGEGVTRTKEQAKKLADSIGAIVKATPAKFTEFLKLSSDPNSAAQGGSLGWTTPETPFV 417
Query: 244 PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG-GEIAL---KAYLSAQNTPTKIEK 299
P+F L + T TQ G I I DK+ G KA + T + +K
Sbjct: 418 PEFLAYLANNPKGATGVVETQFGYHIINIEDKKSGSMGYKVANLVKAIKPSDATEAETDK 477
Query: 300 HEAEYVKKL 308
++++++
Sbjct: 478 KSRKFIQQV 486
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 59/357 (16%), Positives = 114/357 (31%), Gaps = 69/357 (19%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ-----KINGELE 73
L+ F + P K + + + +NGE IT + + ++ +L+ Q + LE
Sbjct: 19 ALALLAFLVNPDSIDKVFGKNPDVLGKVNGEKITREEFNDQLFVLQQQAEQQGRPKNGLE 78
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSN------TVNYFFVQ----HARNTGLSAEDFSSF 123
+ A Q L+ L KQ+ EK G + + F Q ++
Sbjct: 79 EQAWQLLVQSKLIKQQFEKLGFEMTDDYFWNQIQYDQMFAQNQQFFDEKGNFKTQELKKE 138
Query: 124 LDK-QGIGDNHFKQYLAIQ-----SIWPDVV-------------KNDFMLKYGNLEMEIP 164
++ Q + Q+L + + V + + ++K + +I
Sbjct: 139 IETLQNTNPQGYAQWLKTRKTIEYRLMARQVFTNLSAGITTGKKEAEELMKQRDQLADID 198
Query: 165 -------ANKQKMK-NITVREY-----------------LIRTVLFSIPDNKLQNQGFVQ 199
A QK K N+T ++ I V F + + ++
Sbjct: 199 FVKVDYAAYLQKTKINVTTQDLADYIKKHPVMFKAEPSRNIGIVFFPSKPSAADDAAALK 258
Query: 200 KRIK------DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ K DA N + + QYL + L P ++ + +
Sbjct: 259 EITKLYSGGTDASGGTENFQNTKND--SMFVTANSDAPFNPQYLNPAQLPPTIKDQITSA 316
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT-KIEKHEAEYVKKL 308
T PY Q + KR ++ ++ + +P + E KKL
Sbjct: 317 AVGQTFGPYKEQDVYVVSKLVGKRPSDSTLSRHILIAFKGSPAGEGVTRTKEQAKKL 373
>gi|254514975|ref|ZP_05127036.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
gi|219677218|gb|EED33583.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
Length = 276
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 83/304 (27%), Gaps = 48/304 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
L+T I+ + +V + +NG + ++ + + +
Sbjct: 9 LITGVAAGILIALTGLVDAGHAPLPDTTAALVNGTPVPRDELQSVLQRRAQEGAPVDQLL 68
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ ++I E L Q + GI + V ++K + +
Sbjct: 69 ATLDDMIDEELLIQRASELGILRRDSNVRVAI--------------IQAMEKSILNEE-- 112
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + + E + + ++ +++ Q
Sbjct: 113 --------------RGRNLAEAQLQEFY---RDNTALFAEPLRFQLEEIVV---EDETQA 152
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ 254
+ + L D + + +S L + L+ +
Sbjct: 153 TAIITALREGLSAKALAAENDAVSITRLPQVPLSLS------ALSRRFPQDLVSRLETAG 206
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGG----EIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+++G+ I I D R+ ++ L Q I EY++ LR
Sbjct: 207 KGDILTDKSERGIRIIKILDVREANVPPFEDVRLSVLNELQMYRQDI--AYEEYLEWLRQ 264
Query: 311 NAII 314
A I
Sbjct: 265 RADI 268
>gi|260061697|ref|YP_003194777.1| peptidylprolyl cis-trans isomerase [Robiginitalea biformata
HTCC2501]
gi|88785829|gb|EAR16998.1| peptidylprolyl cis-trans isomerase [Robiginitalea biformata
HTCC2501]
Length = 706
Score = 43.1 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 12/131 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTT--INGEVITDGDISKRIALLKLQKINGEL 72
+L L F + +++ + +NGE I+ D R+ +
Sbjct: 15 ILIIGMALFAFVVSDVLTRGGFGSDKIGSAVGEVNGEPISIDDFRARMEAAEGSFGPQAT 74
Query: 73 EKIAVQELIVETLKK----QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
V + +T++ QE EK GI + + + F D G
Sbjct: 75 STQIVNSIWDQTVRTAILGQEFEKLGIDIQQDQIMDLI-----RNNPNFTQNPQFQDANG 129
Query: 129 -IGDNHFKQYL 138
++ F+ ++
Sbjct: 130 NFDEDAFRNFI 140
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 89/292 (30%), Gaps = 32/292 (10%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLK- 86
I I I + + A E A + I E+L+
Sbjct: 206 TSIPDSTISVSKEEIAAYIKENP---SEFKQEAARDLRYVYFEEKASAADETAIEESLRA 262
Query: 87 -KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK-QGIGDNH-FKQYLAIQSI 143
++ E+ DS VN F L+ +D +FLD+ + ++ + +
Sbjct: 263 LLEDEEEYREDLDSTVVNPGF--------LNTDDMLAFLDRNSDTKYDTIYRAKSELPTQ 314
Query: 144 WPDVVKN-----DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
W D + F ++ + +N +V+ +L S + N
Sbjct: 315 WADTLMALETGETFGPYRDGNAFKVSRMMDRKENGSVK---ASHILISYAGAERANPSVT 371
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-------IGKAQYLLESDLHPQFQNLLK 251
+ + + E + L + +FA D S G Y E + F +
Sbjct: 372 RTQEEARERAEELLAEARRSGAQFAQLARDNSDGPSAPNGGDLGYFQEGVMTDAFNDFAF 431
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNTPTKIEKHE 301
+ T T+ G + + DKRD+ + S + + +
Sbjct: 432 GNAVGTVGLVETEFGYHVVKVDDKRDVVRLATLTRAIEPSEETINSLFTEAT 483
>gi|325268744|ref|ZP_08135372.1| hypothetical protein HMPREF9141_0581 [Prevotella multiformis DSM
16608]
gi|324988912|gb|EGC20867.1| hypothetical protein HMPREF9141_0581 [Prevotella multiformis DSM
16608]
Length = 474
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 45/245 (18%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIE 91
+ + TING+ ++ + +G ++K ++ E I LK Q
Sbjct: 18 YGQADPTLMTINGQPVSRSEFEYSYN---KNNSDGVIDKKSIDEYVPLFIDYKLKVQAAL 74
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSS-FLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + + F FL + Q + I V+
Sbjct: 75 DARLD-------------------TLSSFKKEFLGYRD-------QQIRPAFIRDADVEA 108
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ Y + +I AN + +L + + + +++ D+ + L
Sbjct: 109 EARKIYRDTRRQIEANGGL--------WHCAHILVGMRQRASKEEENAARQLADSLYTAL 160
Query: 211 RLPKDCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267
+ D +L K S + G L + +F+ +L T+ P ++ G
Sbjct: 161 QKGADFTELAKKYSTDTRSAKNGGDLPGLQKGQTVAEFEKAMLALKPGETSRPVLSPFGY 220
Query: 268 EYIAI 272
I +
Sbjct: 221 HIIKM 225
>gi|71660705|ref|XP_822068.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trypanosoma
cruzi strain CL Brener]
gi|70887461|gb|EAO00217.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative
[Trypanosoma cruzi]
Length = 124
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN 259
R +A + ++ + + S+ S G + ++ FQ + T
Sbjct: 48 RAMEALK-KINEGSSFADVAREYSEDKARSGGDLGWKRRGEMVGPFQEAAFALPKGGMTP 106
Query: 260 -PYVTQKGVEYIAICDKR 276
P T G I + DK+
Sbjct: 107 EPVKTSFGYHIILVEDKQ 124
>gi|300811432|ref|ZP_07091927.1| putative foldase protein PrsA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497590|gb|EFK32617.1| putative foldase protein PrsA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 307
Score = 43.1 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 53/292 (18%), Positives = 89/292 (30%), Gaps = 48/292 (16%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGE 71
K L VL + + + + S+ + +N G IT + + K
Sbjct: 3 KHLKKIAVLAGAAAIGLSTAACSSSSATV---VNYKGGKITQDE------YYEAMKDTSA 53
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ V +I TLK Q G S +N + ++ + G +FS+ L G+
Sbjct: 54 GQSTLVSLIIYRTLKAQ----YGDKVSSKKINAEYNKYKKQYG---SNFSTVLSYSGLTT 106
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE-------YLIRTVL 184
FKQ LA + A + +K T + Y +T +
Sbjct: 107 KSFKQNLA-------------------TNLYSVAALKDLKKPTTTQEKNWWKSYHTKTTV 147
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
I +K V K++K K + L S
Sbjct: 148 QHIVVDKKSTAETVIKKLKSGTSFATLAKKYSTDTATKKKAGKMAAFDSTDTNLSSTFKS 207
Query: 245 QFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+ K + TT P T G E I + + G K+++ Q
Sbjct: 208 A---VWKLKEGEYTTTPVKTSSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAK 256
>gi|150397715|ref|YP_001328182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
medicae WSM419]
gi|150029230|gb|ABR61347.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
medicae WSM419]
Length = 284
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 46/259 (17%)
Query: 39 SSRIRTTINGEVITDGDISKRIALL--KLQKINGEL-EKIAVQELIVETLKKQEIEKSGI 95
+ + + + I ++ + L +LQ++ E A+ +I L ++ EK G+
Sbjct: 26 TDPVIAKVGDQEIRQSELDLAVTSLDPQLQRMPDEQKRAAALSAVIDVKLLLKDAEKEGL 85
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + +FL ++ + + +FK+++ I ++ P+ VK +
Sbjct: 86 ----------------QNDETFKQRIAFLTERELHNAYFKKHV-IDAVTPEEVKARY--- 125
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+K+ E R +L D + AE ++ +
Sbjct: 126 ----------DKEIAAIPPQEEVKARHILVKTEDEAKAVIKELDAGKNFAELAKAKSTD- 174
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAIC 273
+ G Y + + P+F+ + T P TQ G I +
Sbjct: 175 ----------PNKDEGGDLGYFTKGRMVPEFETAAFALEKGAYTKTPVKTQFGFHVILVE 224
Query: 274 DKRDLGGEIALKAYLSAQN 292
DKR + +
Sbjct: 225 DKRPQAPPTLEQVEPQVRQ 243
>gi|15603844|ref|NP_246918.1| hypothetical protein PM1979 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722418|gb|AAK04063.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 626
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 47/350 (13%), Positives = 99/350 (28%), Gaps = 88/350 (25%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKR-------------IA 61
+ F+L + + ++S + + +R+ INGE I+ +R
Sbjct: 15 SKFLLGLIAVAFVLSGITGYVFTRVDTSAVKINGEEISQQTFYQRYESESERLRQQLGAQ 74
Query: 62 LLKLQKIN---GELEKIAVQELIVETLKKQEIEKSGITFDSNTV---------------- 102
L L + + LI + L +Q ++ I V
Sbjct: 75 FAALSGSPEFVAGLRQSVLNNLINQELLRQYADELKIGISDERVKQEIVTSQFFQQEGKF 134
Query: 103 -NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHF------------------- 134
N + + + GL+ + +++ + + G+ ++ F
Sbjct: 135 DNALYQRMLQLNGLTPDAYANIVREGLRLEQLQTGLAESEFIVPAQQAQLTELFFQARTV 194
Query: 135 -------KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ---KMKNITVREYLIRTVL 184
Q L Q+I + V + G + A Q + + + V
Sbjct: 195 RLAPFSLDQVLEKQTISDEEVSAYYEANKGAFLVPELAKVQYMTLTRADVEKHIQVSDVE 254
Query: 185 FS--IPDNKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFAS--------KIHDVS 230
+ DNK Q+R+ E + + FA KI +
Sbjct: 255 IAQYYQDNKALYVSQGQQRLSHIQVATEAEAKEIYQALQDGANFAGLASARSLDKISAEN 314
Query: 231 IGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
G + F+ Q + P I + ++++
Sbjct: 315 GGDLSWASAGTFPKAFEEAANALQVGQFSQPVKVDDQFHIILVTERKEPS 364
>gi|298370084|ref|ZP_06981400.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281544|gb|EFI23033.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 290
Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 95/296 (32%), Gaps = 27/296 (9%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE----LEKIAVQELIVE 83
+++ S +S++ T+NG I I ++ +++ Q + L K + I+
Sbjct: 9 ALVLAALSGTLSAKTLVTVNGTAIDSSTIDDQVKVIRSQNKQVQDSPALRKSLTERQIIA 68
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN-HFKQYLAIQS 142
T+ QE ++ + +AE + KQG FK A+
Sbjct: 69 TVVSQEAKRLKLDQS------------AEFKKAAEQSRTAATKQGADKKPTFKTEWAVFE 116
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
D++ F + + + N + Y + N+ +
Sbjct: 117 --KDLLGQAFAMHIAKQNPVQEKDIKTAYNDFSKFYKGTQEVQLGQIAARSNEDAQKAIK 174
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LESDLHPQFQNLLKKSQNN-TTNP 260
+ +++ A K ++ G LE P + + + T+ P
Sbjct: 175 DLEAKKSFANVLKQYSVDEQAKKAGGIARGYVPLKDLEQSAPPLYAAIKDLKKGGFTSAP 234
Query: 261 YVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
I D+RD+ +K + ++ ++I+ + L A I
Sbjct: 235 LPNGNVYSVFYINDRRDIKVPSYEEMKNEIGSELQASRIDAA----IGALMQKADI 286
>gi|303249065|ref|ZP_07335308.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
fructosovorans JJ]
gi|302489530|gb|EFL49472.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
fructosovorans JJ]
Length = 654
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 66/233 (28%), Gaps = 42/233 (18%)
Query: 94 GITFDSNTVNYFFV----QHARNTGLSAE--DFS-SFLDKQGIGDNHFKQYLAIQSIWPD 146
GIT + ++ Q A + + +F+ L +
Sbjct: 202 GITPTDEQIKAYYEARKDQFATPAKIKIDYVEFTPKALAQPD------------------ 243
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
K + ++E + K + +R L +P + ++
Sbjct: 244 --------KVTDADIEAYYKANQKKYARPEQVKVRHFLIMLPADAPKSAVDAATAKLKDI 295
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLLKK----SQNNTTNPY 261
++L+ L D IG +L + L +F +K + P
Sbjct: 296 AAKLKAGAAFASLLPKNPNNADGLIGEDWAWLPKGSLPKEFGPFEEKAFSLKNGEISEPV 355
Query: 262 VTQKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKLRSN 311
T G+ I +R GE L K + + K + + ++
Sbjct: 356 RTALGLHLIQA-GERQAAGERPLSEVKDDIREELAERKASDKLTQSLDNMQDK 407
>gi|205372831|ref|ZP_03225640.1| protein export protein prsA [Bacillus coahuilensis m4-4]
Length = 242
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 39/244 (15%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ +IT+ D+ +L + A+++L I + S
Sbjct: 27 QEVIVEAENTLITEEDL-----YNQLLNNYRPQVEQALRDLT-----LLHILEQNYDVSS 76
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ A+ S + +L++ I + FK+ LA+Q + + +
Sbjct: 77 EELQLELEN-AKEALGS--QYEEYLNEYQINEEQFKEQLALQV----LQRKAAISTLEAT 129
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E ++ Q +R +L ++ +K + + L+ L
Sbjct: 130 EKDL----QDFYTTWTPAINVRHILV-------SDKETAKKVLDE-----LQSGTAFEDL 173
Query: 220 EKFAS--KIHDVSIGKAQYLL----ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
+ S + S G + ++ Q + + N + P + G + I
Sbjct: 174 AETYSIDSLTASSGGNLGTISYLERDAFSTEMLQAMDELQVNEISQPIESPYGFHIVEIT 233
Query: 274 DKRD 277
+K
Sbjct: 234 EKER 237
>gi|72536281|gb|AAZ73196.1| hypothetical protein [Escherichia coli]
Length = 1137
Score = 43.1 bits (100), Expect = 0.059, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQSELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|300925835|ref|ZP_07141683.1| DEAD/DEAH box helicase [Escherichia coli MS 182-1]
gi|300418087|gb|EFK01398.1| DEAD/DEAH box helicase [Escherichia coli MS 182-1]
Length = 1137
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQSELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|257083614|ref|ZP_05577975.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis Fly1]
gi|256991644|gb|EEU78946.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis Fly1]
Length = 336
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 10/126 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K + +L + + S + + S+ T+ G IT D +I
Sbjct: 3 KRMKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTS 55
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A +++ K E EK G + F + FS L + G+ +
Sbjct: 56 QQAFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTEKS 112
Query: 134 FKQYLA 139
FK+ L
Sbjct: 113 FKKQLK 118
>gi|218661050|ref|ZP_03516980.1| peptidyl-prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli IE4771]
Length = 293
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 42/313 (13%), Positives = 100/313 (31%), Gaps = 60/313 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + + V++++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKFALLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I +K + D + + +L + + +
Sbjct: 61 KKVAALSAAID--VKLLAADAITEKLDQTD------EFKKRM--------QYLSDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + ++ PD +K + + E+ A E R +L D
Sbjct: 105 AYFKKHV-VDTVSPDEIKARY-------DKEVAAL------PKQEEVHARHILVKTEDEA 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + KD +L K S + S G Y + +F++
Sbjct: 151 KEIIKQLDA------------GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQNTPTKIEKHE 301
+ + P T G I + DKRD + + + + +
Sbjct: 199 FALEKGTYSKTPVKTDFGYHVIKVEDKRDAPPPPFDQVQDQVRQLVMRDKYLTLLNQAKT 258
Query: 302 AEYV----KKLRS 310
+ + + LR
Sbjct: 259 SAKIEISDETLRK 271
>gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
Length = 7662
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 96/282 (34%), Gaps = 36/282 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG- 114
+ R + ++++ E + A++E++ G+ + F + A
Sbjct: 6945 LEHREEMAEIERQAQEEQNKALEEIVE-----------GMAAKLEEEDVEFQKKAAEAKE 6993
Query: 115 -LSAEDFSSFLDKQGIGDNHFKQYLAIQSI-WPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
LSAE+F LD +Q I+ D + + + + ++ ++
Sbjct: 6994 KLSAEEFQKMLDDHEKELESMQQNQEIEIAKHRDQLNSKLEERRRRKQQQLARKQEIEMQ 7053
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-----------------RLRLPKD 215
+ + + + + + IK+ + S + R K+
Sbjct: 7054 KKLLQQQAEADRLNAEREAKKEDAALAETIKELKNSDNENESKRAENLIYHVMQQRHAKE 7113
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ E+ K ++ +AQ + + L+++ ++ G+ + + +
Sbjct: 7114 TLQHEEQLKKELATALAEAQNNVATKCQDNRDKLVEQHEHQLAELLAHSDGISPLELKSR 7173
Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
R L G+ + ++ TK+++ + + L I +
Sbjct: 7174 QRALEGKQQTQLAEFDKDAATKMQEAAKDVMFNL----QIQH 7211
>gi|150019698|ref|YP_001311952.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
beijerinckii NCIMB 8052]
gi|149906163|gb|ABR36996.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
beijerinckii NCIMB 8052]
Length = 248
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 89/281 (31%), Gaps = 46/281 (16%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +++ G IT+ D++ I+ ++ + ++L+ + + + + K G
Sbjct: 1 MENKVLAVAAGYEITEKDLNAIISRYPQEQRGALQSEEKKKQLVEQLISFELMNKFGKEI 60
Query: 98 ---DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ ++ +++ + L I D K+Y
Sbjct: 61 QLDKTQEYKDAMENISKEV-ITSMAINKVLSDVTITDEEVKKY----------------- 102
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ + TV R +L + + K ++ ++
Sbjct: 103 -------YEDNKEAFGQPATVS---ARHILV-------ETEEEANKAREEILSGKISFG- 144
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAIC 273
+ K+++ + G + + P+F+ S+ T P TQ G + +
Sbjct: 145 --DAAMKYSTCPSNQQGGNLGEFSKGMMVPEFEEAAFTSEIGKVTEPVKTQFGYHLV-LV 201
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEY---VKKLRSN 311
D ++ + + + E +Y +K+L +
Sbjct: 202 DAKNEASIKSFEEVKDSVLDNLIKENQHKKYDQILKELEAK 242
>gi|304405852|ref|ZP_07387510.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
gi|304345095|gb|EFM10931.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
Length = 364
Score = 43.1 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 90/293 (30%), Gaps = 38/293 (12%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL-------EKIAVQELIVETLK 86
+ ++ +TD + + + L E+ ++ ++E I +
Sbjct: 42 APASGEGKVIAEYKDGTVTDKEFDRYLGFFSLVNEQAEMYLTVPSMKEQFLREYIGYKVL 101
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+++ V+ F Q + S + + ++K G+ ++ Y +
Sbjct: 102 YSRVDEKSKDSSKEEVDKFVDQFKQTAD-SNAEMKAKMEKSGLTVDNAAWYYRM------ 154
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD-NKLQNQGFVQKRIKDA 205
+V + + ++ A K + +R +L D + + + +K A
Sbjct: 155 IVSVMDHSEQNVKDADMKAIYDKAPSDFNN-ITVRHILIGFKDPSTGKEKLSKADALKKA 213
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-----NNTTNP 260
+E + +L + D L E+ + KK+ +P
Sbjct: 214 QEVKQKLEAGGDWAALAKQYSDDEGSKDKGGLYENQEPRVWVEAFKKAANTQEIGKIGDP 273
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
T+ G +K T ++ + + +LR +A
Sbjct: 274 VETEYGYH--------------VMKVEKRETRTWEQVPQATKD---ELRKSAS 309
>gi|307297459|ref|ZP_07577265.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306916719|gb|EFN47101.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 546
Score = 43.1 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 78/289 (26%), Gaps = 31/289 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR-IALLKLQKING- 70
+K + F + I + + ++ N IT +I + A + G
Sbjct: 1 MKKFLLILLAAFFSLTLIGAEYAVRITKGGEAVSNEFWITREEIEQAFSATVANAASQGI 60
Query: 71 ----------ELEKIAVQELI-----VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
++ ++ +I E L +S + ++
Sbjct: 61 ILDPYFDSYFTPSELGLKTMIIPYIVDEKLIDYFAWESNLIPSEEEIDAETDSMMEMYTS 120
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
S + G + F+ + V + + E P N +
Sbjct: 121 SPDMVEQIEAIYG-SMDAFRSEIRN------YVSDALKAEL-VQESVAPLNDDALAAYFE 172
Query: 176 ---REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
E + + + + + + + + +S + G
Sbjct: 173 EFKTEIKNQFETIRARHILVTEEATATELMDRINSGEITFAEAALQFSIDSSTA--ANGG 230
Query: 233 KAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
+ ++ P+F+ +L P ++ G I + ++ ++
Sbjct: 231 ELGSIVRGQTVPEFEEAILAAPIGELYGPVQSEFGYHLIIVEERNEINS 279
>gi|126740048|ref|ZP_01755738.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
SK209-2-6]
gi|126718867|gb|EBA15579.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
SK209-2-6]
Length = 265
Score = 43.1 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 89/282 (31%), Gaps = 44/282 (15%)
Query: 44 TTINGEVITDGDISKRIALLKL-QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+NGE + +I+ + G + A + + TL QE + I D + V
Sbjct: 9 LVVNGETVPHTEIAAETQNQEAPAGKPGIAWRKAANAVAIRTLLLQEARRQKIEADPHEV 68
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
E L + + + + W F
Sbjct: 69 EPG------RFETDEEALIRGLLETEVDVKSPTDDEIKAE--WARD-PARFR-------- 111
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + + +L + +++ +K +K A+ L +
Sbjct: 112 ------------SAPLWEVSHILCAC---DPRDEEGREKALKKAQFLTATLLAKPSIFAS 156
Query: 222 FASKIHDV----SIGKAQYLLESDLHPQFQNLL-KKSQNNTTN-PYVTQKGVEYI---AI 272
A K D + G L D P+F+ +L Q T P +++ G + A+
Sbjct: 157 LAKKESDCGSKEAGGSLGQLRPGDSVPEFEQVLFDLEQGQITAEPVLSRHGYHIVRMDAL 216
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ ++L E A ++ + A + YV+KL A I
Sbjct: 217 AEGQELPFEAAKRSIMLAMEKAA-WTRAAQAYVQKLIEGAEI 257
>gi|52425898|ref|YP_089035.1| SurA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307950|gb|AAU38450.1| SurA protein [Mannheimia succiniciproducens MBEL55E]
Length = 622
Score = 43.1 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 56/390 (14%), Positives = 116/390 (29%), Gaps = 99/390 (25%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLK 64
S S F K++ + ++ + +V ++ A + INGE I+ ++ +
Sbjct: 9 ASNSIFSKII--FALISVAFVVSGMAGYMVATADTSAVKINGEEISQQAFQQQYNDEYQR 66
Query: 65 LQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTV-------- 102
L + G L K + LI + L +Q + + +V
Sbjct: 67 LSQQLGAQFSAVADTPEFSEGLRKSVLNRLIDQELLRQYVTDLKLVASDASVKQEIVTTP 126
Query: 103 ---------NYFFVQHARNTGLSAEDFSSFLD--------KQGIG--------------- 130
N + Q R ++A+ ++ ++ + G+
Sbjct: 127 AFQADGKFDNNAYQQTLRANNMTADMYAEYVREALRLDQLQSGLAGTVLMLPAQQEEFAK 186
Query: 131 ----DNHFK-------QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ--------KMK 171
F+ +A Q++ V + + + Q K
Sbjct: 187 LFFQKRTFRLAKLPLTAEMAKQTVTDQEVADYYNANKSAFMVPELVKVQYLDITRAAAEK 246
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR----------LRLPKDCNKLEK 221
+ V + I+ DNK Q Q R+ + ++ L+ D L K
Sbjct: 247 AVKVTDVEIQQYY---QDNKAQFVSKAQDRLAHIQFAKETDALDAYQALQNGADFAALAK 303
Query: 222 FAS--KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278
S K V+ G+ +L DL F+ Q + P I + D+++
Sbjct: 304 EKSLDKPSAVNGGELGWLNAGDLPKAFEEAAAALQIGQYSQPVKVDNQYHIIKLEDRKEP 363
Query: 279 GGEIALK------AYLSAQNTPTKIEKHEA 302
+ + + + + E
Sbjct: 364 KAQSLEEVKDLIASQIRQDLLNNQFYSLEK 393
>gi|226308370|ref|YP_002768330.1| TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226187487|dbj|BAH35591.1| putative TetR family transcriptional regulator [Rhodococcus
erythropolis PR4]
Length = 237
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 12/195 (6%)
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+N A GL A + G+G + A + ++++ F + +E
Sbjct: 36 LNSAREVFAAQ-GLDA-TLADVAKHAGVGVGTVYRRFASK---DELIQALFDTRCSEIET 90
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
++ Y + + + DN+ + R +R R +
Sbjct: 91 IAATAREMPDAWEGLVYFLDVISLRMADNRGFGDLLMDGRFASDTFARARAGIAQHTAAL 150
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQK--GVEYIAICDKRD 277
++ E + P ++K +Q P ++ G +C R
Sbjct: 151 VNRAKEQGTLRSD---FEVNDIPLLMQVVKMAQKFGGDEAPQAYRRALGFMIDGLCASRT 207
Query: 278 LGGEIALKAYLSAQN 292
E+ + A S Q
Sbjct: 208 GHRELPVPALSSEQL 222
>gi|194448462|ref|YP_002048346.1| type III restriction enzyme, res subunit [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194406766|gb|ACF66985.1| type III restriction enzyme, res subunit [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
Length = 1137
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQSELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|209551115|ref|YP_002283032.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209536871|gb|ACI56806.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 293
Score = 43.1 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 94/290 (32%), Gaps = 56/290 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + L + V+ ++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKLAVLAFATFVALQAPAYADDAVIAKVGNLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I L + + + + +L + + +
Sbjct: 61 KKVAALSAAIDVKLLAADAAAEKLDQTD--------EFKKRM--------QYLTDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + + P+ VK + + E+ A E R +L
Sbjct: 105 AYFKKHV-VDIVTPEEVKARY-------DKEVAAL------PKQEEVHARHILVKT---- 146
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + IK + KD +L K S + S G Y + +F++
Sbjct: 147 ---EDEAKDIIKQLDA-----GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQ 291
+ + P T G I + DKRD + + + +
Sbjct: 199 FALEKGTYSKTPVKTDFGYHVIKVEDKRDAPPPPFEQVQDQVRQLVMRDK 248
>gi|284052749|ref|ZP_06382959.1| hypothetical protein AplaP_14868 [Arthrospira platensis str.
Paraca]
gi|291566013|dbj|BAI88285.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 246
Score = 42.7 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 92/269 (34%), Gaps = 40/269 (14%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
IT DI K++ L ++ +I + ++GI ++ +
Sbjct: 7 ITAEDILKQVKL-------SIQIPDLIESIISRKIITDAATEAGIKVETEELQKAADTMR 59
Query: 111 RNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---AN 166
L SA++ ++L+K + + ++ + I +V + F K + A
Sbjct: 60 SLQNLHSAQETFAWLEKHHLSVDDLEEVAYMSIISQKLVAHLFADKVEPYFYDNQLDYAG 119
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + E L + ++I + ++ K I+D E R
Sbjct: 120 VVMYEVVLDDEDLAMELFYAIQEGEMSFYDVAHKYIQDVELRRQ-------------GGY 166
Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
V K DL P+ + + P VT KGV I + D ++
Sbjct: 167 RGVLSRK-------DLQPEVSAAVFAATPPQLVKPIVTSKGVHLILVEDI--------IQ 211
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
A L + + +E+VKK +A I
Sbjct: 212 AELDNKLRFQIVSDLFSEWVKKKVDSADI 240
>gi|257460463|ref|ZP_05625564.1| foldase protein PrsA [Campylobacter gracilis RM3268]
gi|257441794|gb|EEV16936.1| foldase protein PrsA [Campylobacter gracilis RM3268]
Length = 269
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 97/304 (31%), Gaps = 49/304 (16%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQE 79
++F + + + S + + T+NG+ +T+ +++ + I + + +N E +K + +
Sbjct: 4 VLFTALSLAAAISLNAT--VYATVNGKDVTEKELAPLLQGIGNVDIAALNAEQKKELIDK 61
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L E +KSG+ + + + L K LA
Sbjct: 62 GIDLMLLTDEAKKSGV-------------------MDEDVYKKEL-------EIVKDNLA 95
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ V + K + EI K K I+ + N Q
Sbjct: 96 L-----RVWQAKEASKINIDDKEIADFYNKNKARFTEPARIKAAQIVVKTEAEANDIIKQ 150
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN 259
+ + + K + + S G+ ++ + P + K T
Sbjct: 151 LKGLSDSALFTKFAEL-AKAKSIDPQAKQTS-GELGWMPSDQVKPFADAISKIKDGQITT 208
Query: 260 -PYVTQKGVEYI---AICDKRDLGGEIAL---KAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
++ G + K+ L A + L Q +E+ A+ L NA
Sbjct: 209 KAIRSRVGYHVVLKEESQAKKQLSQSEAKPFIERVLRQQKAAKVVEQKAAD----LHKNA 264
Query: 313 IIHY 316
I Y
Sbjct: 265 KIEY 268
>gi|226355582|ref|YP_002785322.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus deserti
VCD115]
gi|226317572|gb|ACO45568.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor
[Deinococcus deserti VCD115]
Length = 626
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 86/283 (30%), Gaps = 14/283 (4%)
Query: 43 RTTINGEVITDGDIS--KRIALLKLQKING----ELEKIAVQELIVETLKKQEIEKSGIT 96
+NG+ +T ++ +R + G + + V + + + L Q S I
Sbjct: 43 ALVVNGKTVTAEELDGVRRSNPVLSSTDTGILGDDFKTFTVAQKVRQVLVAQAA--SDIK 100
Query: 97 FDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ VN + L+ ++ ++ L G+ D ++ L Q V + + K
Sbjct: 101 VSRDDVNAEVKKIREANSLTDSKAWTDALQGVGLTDATYRAQLREQLAVNRKV--EELRK 158
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E A N + R + I K + +++ + +
Sbjct: 159 AVPAATEAEAKLYYDLNPEKFQSEARIIGRQIVVAKEAKAKELLAQVRGGADFAAVAKAN 218
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + V GK + + + L + ++ T+ + + +
Sbjct: 219 STEFADRGGALGPVENGKPRPVAQVALPAEVGAAAFALTKGGITDVVASGDKFYIVKVEQ 278
Query: 275 --KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
KA T K E+V+ L + I
Sbjct: 279 YLAPATKPFAEAKADAITAVTEQKKNAALEEWVEGLEKDVKIE 321
>gi|86359353|ref|YP_471245.1| peptidyl prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli CFN 42]
gi|86283455|gb|ABC92518.1| peptidyl prolyl cis-trans isomerase D signal peptide protein
[Rhizobium etli CFN 42]
Length = 293
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 42/313 (13%), Positives = 100/313 (31%), Gaps = 60/313 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + + V++++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKFAVLAFATFVAFQAPAHAEDAVVAKVGNLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I L + + + +L + + +
Sbjct: 61 KKVAALSAAIDVKLLAAGATTEKLEQTD--------EFKKRM--------QYLTDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + ++ PD +K + + E+ A E R +L
Sbjct: 105 AYFKKHV-VDTVTPDEIKARY-------DKEVAAL------PKQEEVHARHILVKT---- 146
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + IK + KD +L K S + S G Y + +F++
Sbjct: 147 ---EDEAKDIIKQLDA-----GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQNTPTKIEKHE 301
+ + P T G I + DKRD + + + + +
Sbjct: 199 FALEKGAYSKTPVKTDFGYHVIKVEDKRDAPPPPFDQVQDQVRQLVMRDKYLALLNQAKS 258
Query: 302 AEYV----KKLRS 310
+ + + LR
Sbjct: 259 SAKIEISDETLRK 271
>gi|261868689|ref|YP_003256611.1| peptidyl-prolyl cis-trans isomerase D [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261414021|gb|ACX83392.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 615
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 15/150 (10%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITD--GDISKR 59
V L + F+ + ++S + + SRI +NGE I+
Sbjct: 2 VMEKLHGASNNWASKFLFGFITVTFVISSMAGYLYSRIDSSAAKVNGEEISQQAFQNQYN 61
Query: 60 IALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR- 111
IA L + L++ + LI + L +Q ++ + + V
Sbjct: 62 IASQNLSPQEADSPTVVANLKRQVLSSLIDQELLRQYVKDLKLGVSDERIKQEIVTTPSF 121
Query: 112 NTGLSAEDFS--SFLDKQGIGDNHFKQYLA 139
++ L GI + Y+
Sbjct: 122 QNNGKFDNVLYQQLLQSNGISAETYAGYVR 151
>gi|153864542|ref|ZP_01997413.1| secreted protein [Beggiatoa sp. SS]
gi|152145964|gb|EDN72588.1| secreted protein [Beggiatoa sp. SS]
Length = 110
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 17 TTYFVLIIFCIVPI---VSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKI- 68
TY LI++C++ I V I +N +VI + + +++ L Q I
Sbjct: 3 KTYQSLILYCLLIISFDVCAAQRETLDYIVAIVNDDVIVNTALQQQLRREHEKLAQQNIE 62
Query: 69 ---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
N LEK + +I+ L+ Q EK+GI + + + F
Sbjct: 63 LPPNVNLEKRVLDSMIMIALQLQLAEKTGIKVEDSHLKRSFT 104
>gi|331000013|ref|ZP_08323709.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis
YIT 11859]
gi|329573161|gb|EGG54778.1| PPIC-type PPIASE domain protein [Parasutterella excrementihominis
YIT 11859]
Length = 270
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 93/299 (31%), Gaps = 47/299 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQ 78
VL F + ++ A ++ T+NG+ ++ + + + L+ +L+ A
Sbjct: 5 VLKSFVLAAALAGVLPAAVAQTAFTVNGQFVSVEEQKQLMDFLRANGVTNEKQLKNAARS 64
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L+ + + +Q G+ D +S +
Sbjct: 65 ILLEQKIIEQAARNEGLLEDPR----------VRVLISEKQ------------------- 95
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGF 197
Q + ++ + ++ E ++ + + E R +L P+
Sbjct: 96 -AQL-YGSILSRRYASEHPITEEQVRNRYDSLLSSYDPHEIKFRHILVKTPEEAR---EI 150
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNN 256
+Q ++ L + ++ I +I + + +L +
Sbjct: 151 IQSLKVGSDFGSLAKERSLDQSTSQNGGQIPFTNIRNVL------VPGLAEAILALQPGD 204
Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
P+ ++ G + + +KR++ + + E++ L+ +A I
Sbjct: 205 LLPVPFKSKLGYHVVLLEEKREVP--FPSYEEVKPKVLSELERLQTTEFLNDLQKDAKI 261
>gi|312879532|ref|ZP_07739332.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminomonas
paucivorans DSM 12260]
gi|310782823|gb|EFQ23221.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aminomonas
paucivorans DSM 12260]
Length = 297
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 41/128 (32%), Gaps = 15/128 (11%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--------IGKAQYLLESDLHP 244
V+ + + E S + FA + S G +++
Sbjct: 152 AEAVHVRHILTEDEASARKALLAVLGGADFAKTAAEQSRDKATAERGGDLEWVERGQTPK 211
Query: 245 QFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
F++L+ ++ P T G + + +KR A +A + ++ +
Sbjct: 212 AFEDLVFSLRKDAVGGPVKTDFGWHVVQVLEKR------AARALSFEEAKGEVAQRLQRS 265
Query: 304 YVKKLRSN 311
Y+++
Sbjct: 266 YLEETLKK 273
>gi|296116178|ref|ZP_06834796.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter hansenii
ATCC 23769]
gi|295977284|gb|EFG84044.1| peptidyl-prolyl cis-trans isomerase D [Gluconacetobacter hansenii
ATCC 23769]
Length = 639
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 41/378 (10%), Positives = 104/378 (27%), Gaps = 87/378 (23%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI----------TDG-DISKRIALLKLQK 67
+F+ + V V + + + + I T+ I++++ L +
Sbjct: 18 FFLTFVGWGVGDVLMNIGTERADVVARVGPDPILVPAYEQALRTEMPQIAQQMHLDDPSQ 77
Query: 68 INGELE----KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA------RNTGLSA 117
I + +Q LI++ G+ + V A +N
Sbjct: 78 IPAATREQIAQQVLQRLILQDEVALAARNHGLLVPDSAVRAEI--FAIPAFQDKNGKFDR 135
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--------------KNDFMLKYGNLEMEI 163
F++ L G+ + + + + ++ + F L+ +++I
Sbjct: 136 TTFNNRLRSSGMTEARLIELVRAEQASKALMEPIRNGAGAPDLLTRRIFDLEAQTRKVDI 195
Query: 164 PA---NKQKMKNIT----------------VREYLIRTVLFSIPDNKLQNQ--------- 195
Q + EY ++ P+ ++
Sbjct: 196 VRVPFAAQTPAAPSDAQARRFHTNHPWLFEAPEYRHARIVVLSPETVARSMTIPDADLHH 255
Query: 196 --GFVQKRIKDAEESRLRLPKDCNKLEK----------------FASKIHDVSIGKAQYL 237
+R E +++ N+ S D + + +
Sbjct: 256 MYEQQAQRFNTPETRSVQVITAPNEARARELLTTWQGGASWDAMQKSAGKDSASVEMDDI 315
Query: 238 LESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNT 293
S + Q + + + + P T G + + + + L AQ
Sbjct: 316 RISSIPSQELGRQIFNAPSDTVSPPIHTDGGWAIFRVLHVTPAHISDFESARPALQAQAL 375
Query: 294 PTKIEKHEAEYVKKLRSN 311
+++ + V+KL+
Sbjct: 376 AERVQAQIGDRVQKLQDA 393
>gi|329942658|ref|ZP_08291437.1| hypothetical protein G5Q_0326 [Chlamydophila psittaci Cal10]
gi|332287253|ref|YP_004422154.1| putative exported protein [Chlamydophila psittaci 6BC]
gi|313847839|emb|CBY16833.1| putative exported protein [Chlamydophila psittaci RD1]
gi|325507071|gb|ADZ18709.1| putative exported protein [Chlamydophila psittaci 6BC]
gi|328814918|gb|EGF84907.1| hypothetical protein G5Q_0326 [Chlamydophila psittaci Cal10]
gi|328914499|gb|AEB55332.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
Length = 361
Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 33/184 (17%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKS 93
+ V+T D+ +++ LL +E + ++ +I E L + +
Sbjct: 61 DDTVVTTLDVIQKLNLLFASSYPQLMESYPARSQYYTAMWPVVLESVIDEFLMVADAKAK 120
Query: 94 GITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
I D TVN ++ +D + + L Q +
Sbjct: 121 KIQVDPTTVNQEVEAMFGRDLSFFYVHFDMTPDDVFKVVHRT----------LVAQRVMG 170
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ--KRIK 203
+V++ MLK ++ N+ + + R V L +Q + R+
Sbjct: 171 MMVRSKVMLKITPGKIREHYNQLAEEAAKTTLWKYRVVTIKAATESLSSQIADKICARLN 230
Query: 204 DAEE 207
+ +
Sbjct: 231 ETQS 234
>gi|297243352|ref|ZP_06927285.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis AMD]
gi|296888599|gb|EFH27338.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis AMD]
Length = 449
Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 26/64 (40%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+K E ++ A +EL + + E+ +T V F V A+ G+ F + +
Sbjct: 324 TKKQKDEAQQAAEKELRDQMVLDALAEQMDVTVSQADVTNFLVSVAQQYGMDPNQFINAI 383
Query: 125 DKQG 128
G
Sbjct: 384 VNNG 387
>gi|239814796|ref|YP_002943706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
S110]
gi|239801373|gb|ACS18440.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Variovorax paradoxus
S110]
Length = 636
Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 45/409 (11%), Positives = 115/409 (28%), Gaps = 107/409 (26%)
Query: 5 VFTSLSDFIKLLTTY-FVLIIFCIVPIVSYKSWAMSSRIRTT-INGEVIT--DGDISKRI 60
+F + K++ + F+LII V + ++ ++G+ IT + D R+
Sbjct: 1 MFDFFRKYNKIVMIFLFLLIIPSFVLFGVERYQGSGGEVKVARVDGQNITRPEWDAQHRL 60
Query: 61 ALLKLQKINGEL----------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
++++ + + ++ ++ + + KS +T ++ F Q
Sbjct: 61 ETDRIRQQSPNVDPTLLESDVMRYATLERMVRDRVLAAAAAKSNVTISEERLSRIFAQDT 120
Query: 109 ----------------HARNTGLSAEDFSSFLDKQ--------GI-------------GD 131
R TG + E + + + + G+
Sbjct: 121 GLAAFRTPDGKFDRESFQRVTGRTPEQYEASMRAELATQQMLLGVTGTAFTPPALAAATI 180
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA-------------------------- 165
N F IQ F K + ++ A
Sbjct: 181 NAFYDRREIQVA--RFSPESFASKVTVSDADVEAYYKAHTAQFQAPEQASIEYLVLDLEA 238
Query: 166 ----------------NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ + T E +L + P + K + +
Sbjct: 239 AKKNISVNEADLKTYYEQNTARFGTKEERRASHILITAPASAPAADRAKAKAKAEQLLAE 298
Query: 210 L-RLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265
+ + P + + S+ + G ++ + F++ L + + ++ T+
Sbjct: 299 VKKAPATFADVARKNSQDPGSAEKGGDLDFVTRGAMVKPFEDALFALKKGDISDVVETEF 358
Query: 266 GVEYIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
G I + D + ++ + +Q + K + +
Sbjct: 359 GYHIIRLADIKPAVVPPFEQVRATIENEVRSQQATQEFAKAAETFTDAV 407
>gi|290474659|ref|YP_003467539.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of
outer membrane proteins [Xenorhabdus bovienii SS-2004]
gi|289173972|emb|CBJ80759.1| peptidyl-prolyl cis-trans isomerase, for periplasmic folding of
outer membrane proteins [Xenorhabdus bovienii SS-2004]
Length = 623
Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 48/149 (32%), Gaps = 19/149 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGE------ 71
++I+ ++ V+ + +NG+ I+ + + + + LQ G+
Sbjct: 19 ALIILTFVLTGVTGYLSSEGGNYAAKVNGQTISRAQLEQAFQQDKIALQDRLGDQFSTLL 78
Query: 72 --------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDF 120
+ + ++ LI L Q K G++ V + +
Sbjct: 79 SDEQKVQQIRRSSLDRLITVILSDQYARKLGLSASDEQVKEEIRNLPFFQTDGKFDNNKY 138
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ L ++F + + I ++
Sbjct: 139 LTLLTGANRSPDNFAEQVRQDLINRQLMS 167
>gi|283783344|ref|YP_003374098.1| trigger factor [Gardnerella vaginalis 409-05]
gi|283441664|gb|ADB14130.1| trigger factor [Gardnerella vaginalis 409-05]
Length = 449
Score = 42.7 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 26/64 (40%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+K E ++ A +EL + + E+ +T V F V A+ G+ F + +
Sbjct: 324 TKKQKDEAQQAAEKELRDQMVLDALAEQMDVTVSQADVTNFLVSVAQQYGMDPNQFINAI 383
Query: 125 DKQG 128
G
Sbjct: 384 VNNG 387
>gi|294650670|ref|ZP_06728024.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter haemolyticus
ATCC 19194]
gi|292823461|gb|EFF82310.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter haemolyticus
ATCC 19194]
Length = 623
Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 73/190 (38%), Gaps = 25/190 (13%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
S IK +L++F +V I Y S + + ++NG+ I++ ++ I
Sbjct: 1 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFSGGNKADVAKSVNGQDISNKELESAIK 60
Query: 62 -----LLKLQKINGEL------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
L L + + L ++ A+ L+ +L Q+ EK GI+ + Q
Sbjct: 61 NYKDQYLALVQGDESLLNLSAIQERAMDALVARSLLSQQAEKLGISLSDAQLEQMLAQQP 120
Query: 109 -HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ----SIWPDVVKNDFMLKYGNLEMEI 163
+N S + + ++L G+ + L I ++ N + K +++
Sbjct: 121 SFQQNGQFSQQLYENYLRSVGLTNQALISSLRQDHALKMISSSLMDNALVSK---SDLQQ 177
Query: 164 PANKQKMKNI 173
AN Q +
Sbjct: 178 LANLQTEQRT 187
>gi|194289547|ref|YP_002005454.1| peptidyl-prolyl cis-trans isomerase [Cupriavidus taiwanensis LMG
19424]
gi|193223382|emb|CAQ69387.1| PEPTIDYL-PROLYL CIS-TRANS ISOMERASE [Cupriavidus taiwanensis LMG
19424]
Length = 644
Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 43/395 (10%), Positives = 104/395 (26%), Gaps = 106/395 (26%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKINGELEK----- 74
F + SY + SS ++G I+ ++ + ++ N + +
Sbjct: 24 FVFFGVESYSRFMDSSHDAAKVDGRAISVQEVDNVVRDQSERARQILGANYDPRQFEGPE 83
Query: 75 ---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--------ARNTGLSAEDFSSF 123
+++LI + + + +T + ++ + + +
Sbjct: 84 ARKAVLEQLIQQRVMANAVASEHLTVSDAKLLEEISSLPAIAQLPRGKDGKIDDKAYLQL 143
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDV---VKN---------DFMLKYGNLEMEIPANKQKMK 171
L QG+ F + + + V + ++ + + ++ A K
Sbjct: 144 LQSQGMTPEQFDARMRFELAMQQLGASVAATAFVPKSLIERLMAARDQQRDVQALLFKPA 203
Query: 172 NITVRE----------YLIRTVLFSIPDNKLQNQGFVQ---------------KRIKDAE 206
T + Y FS+P+ + K ++
Sbjct: 204 GYTAKVQPDAAALKAYYDSHQQDFSVPEQAKVEYLVLSGEALAASQAVTPEELKSYYESN 263
Query: 207 ESRLRL-------------PKDCNKLEKFASKIHDV------------------------ 229
+R R+ PKD ++ A+K
Sbjct: 264 IARFRVDEQRRASHILISAPKDAPAAQRQAAKDKATKLLEEVRKHPDTFADVARKNSQDP 323
Query: 230 ----SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL------ 278
G ++ L F++ + + ++ T G I + +
Sbjct: 324 GSAEKGGDLGFMGRGALVKPFEDAMYALKEGQISDVVETDFGYHIIKLTGTKPAETRPLE 383
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
L+A L Q K + + + A
Sbjct: 384 AVRTELEAELRKQFADKKFAEQADAFGNTVYEQAD 418
>gi|146284004|ref|YP_001174157.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas stutzeri
A1501]
gi|145572209|gb|ABP81315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas stutzeri
A1501]
Length = 392
Score = 42.7 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 70/239 (29%), Gaps = 48/239 (20%)
Query: 107 VQHARNTGLSAEDFSSFLDK--QGIGDNHFKQYLAIQSIWPDVVKNDFML-KYGNLEMEI 163
+ A G+S + L K QG +F+ A + ++++ L+ E
Sbjct: 138 AEIAERLGISVNTVIAQLAKARQGWSARNFQA--ARALVVRELLRQRAEALGLSLLDAEG 195
Query: 164 PANKQKMKNITVREYLI---------------------------RTVLFSI-PDNKLQNQ 195
+ + + ++ RE + R +L PD+
Sbjct: 196 REDDRTLASLLERELQVPEPDDAACRRFFEHHRERFAEPLLLRVRHILLPAAPDDARARD 255
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-KSQ 254
+ K + + + ++ ++ G +L P+ L+ +
Sbjct: 256 AQYRLGQKLLRQLQAAPARFTELAQRHSACPSKEDGGALGWLAPGQTVPELDRALRHLAI 315
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
P ++ G +++ ++R + P E+ LR A
Sbjct: 316 GLHERPLASRYGWHLVSVDERR--------------EERPLPYEQVAERVRHSLREQAT 360
>gi|315634906|ref|ZP_07890188.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC
33393]
gi|315476458|gb|EFU67208.1| peptidyl-prolyl cis-trans isomerase [Aggregatibacter segnis ATCC
33393]
Length = 615
Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 26/217 (11%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITD------GD 55
V L + F+ + ++S + + +R+ +NGE I+ +
Sbjct: 2 VMEKLHGASTNWASKFLFGFITVTFVISSMAGYLYTRVDNSAAKVNGEEISQQAFQNQYN 61
Query: 56 ISKRIALLKLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QH 109
I+ R + L++ + LI + L +Q + + + V
Sbjct: 62 IASRNLTPQEIDSPAQVANLKRQVLASLIDQELLRQYANELKLGVSDARIKQEIVTTPTF 121
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
N + L GI + Y+ + G +PA ++K
Sbjct: 122 QNNGKFDNTLYQQTLQNNGISAETYAGYVR-----EALRLEQLQSGLGTTTFSVPAQQEK 176
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
+ + + R + + N ++ + D E
Sbjct: 177 LTKLF---FQSRQIRLA---NLSLANEIAKQEVSDEE 207
>gi|301632869|ref|XP_002945502.1| PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Xenopus
(Silurana) tropicalis]
Length = 638
Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 50/164 (30%), Gaps = 10/164 (6%)
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF-SIPDNKLQNQGFVQKRIKDAEESR 209
+ ++ + + + E +L + D Q + + R ++
Sbjct: 305 RAGITLSEDDLRTYYQENRERLAGKEERRASHILVNATQDAPAQERETAKARAQELLAQV 364
Query: 210 LRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKG 266
+ P + K S+ S G + + F++ + + + ++ + G
Sbjct: 365 RQNPGGFAGIAKKNSQDSGSAPSGGDLGFFARGAMVKPFEDAVFSMQKGDVSDVVESDFG 424
Query: 267 VEYIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEY 304
I + D + L+A L Q ++ + +
Sbjct: 425 YHIIQLTDVKTPQPPSFEQARAKLEAELKQQQAQSQFTEAAEAF 468
>gi|197124849|ref|YP_002136800.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
gi|196174698|gb|ACG75671.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
Length = 354
Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 48/326 (14%), Positives = 97/326 (29%), Gaps = 60/326 (18%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSR---IRTTINGEVITDGDISKRIA----LLKLQK 67
+L +L + + S + T NG IT G++ R+ ++ +
Sbjct: 1 MLRRIVLLGLVALAATACQPGSKDSKKSGPAVATGNGFTITAGEMKARLDEQSPFIRARY 60
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
E +K + LI + +E E+ G+ + V
Sbjct: 61 STLERKKEFLDNLIRFEVLAREAERQGL-ANDPDVQLTL--------------------- 98
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFM-LKYGNLEMEIPANKQKMKNITVREY------LI 180
+ + +Q +V+ +F E A+ QK + EY +
Sbjct: 99 --------KKVMVQ----KLVQKNFQDANGAAAEAMPEADLQKYYDEHKAEYYRPRRVRL 146
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFA-----SKIHDVSIGKAQ 235
V+++ P + V K + + K+ + + G
Sbjct: 147 AAVVWNAPAGSPERAAKVALAKKALAKLKAEEKKNTLAFAQLVNEFSEDAASKATAGDLG 206
Query: 236 YLLESDLHPQFQN-----LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYL 288
+ DL + T+ T V + ++D +KA +
Sbjct: 207 FKSREDLEKAYSKEFADVTFNLQPGATSGVLETANAVYLVKGTGEQDELNRTFEQVKAQI 266
Query: 289 SAQNTPTKIEKHEAEYVKKLRSNAII 314
+ K K ++KKLR +A +
Sbjct: 267 QTKLYREKKTKEFDGWLKKLRDDAKV 292
>gi|218290813|ref|ZP_03494882.1| trigger factor [Alicyclobacillus acidocaldarius LAA1]
gi|218239171|gb|EED06372.1| trigger factor [Alicyclobacillus acidocaldarius LAA1]
Length = 435
Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 53/149 (35%), Gaps = 11/149 (7%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSAEDF 120
L+K E K+ + I + ++ +E++ I +++ A+ +
Sbjct: 271 LRKKLEERAKLEHERYIENEVVRKAVERATIEIPPIMIEREIDHQIGHFAQQLQMQQIPL 330
Query: 121 SSFLDKQGIGDNHFKQY---LAIQSIWPDVV----KNDFMLKYGNLEMEIPANKQKMKNI 173
++L+ G+ + LA Q++ +V N ++ ++E + +
Sbjct: 331 DAYLEFTGLTMEELRDQYRELAEQNVRTSLVLEAIANAEQVEVTEEDVEQEIARMAEQTG 390
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + F P+ ++
Sbjct: 391 LEADRVRQLLSFRDPELASLRADLKTRKT 419
>gi|186683556|ref|YP_001866752.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme
PCC 73102]
gi|186466008|gb|ACC81809.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nostoc punctiforme
PCC 73102]
Length = 251
Score = 42.7 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 59/194 (30%), Gaps = 25/194 (12%)
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L + E+ I + + L + ++L Q I + + + I
Sbjct: 44 ILTLKLCEQLDIKVTDEELQAAGDTFRQENKLLGTSETLAWLAHQRISVEDWSEIIRISL 103
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + ++ F + + N+ K + + + L+R + + +
Sbjct: 104 LSQKLKEHLFGVAVDD---HYINNRDSYKRVALSQILVRD---------------LTEAM 145
Query: 203 KDAEESRLRLPKDCNKLEKFA----SKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
K + R + C +++ SK + +G L L +
Sbjct: 146 KITKALRDKKDSFCALALEYSQGKQSKENGAFVG--IRFLTELLPEITNAIADIDVGELV 203
Query: 259 NPYVTQKGVEYIAI 272
P TQ G + +
Sbjct: 204 GPIQTQLGYHILRV 217
>gi|257892780|ref|ZP_05672433.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,408]
gi|257829159|gb|EEV55766.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,408]
Length = 303
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 48/131 (36%), Gaps = 13/131 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ F+ + + + + + G I++ ++ +L K+Q + ++++
Sbjct: 1 MKKKFLALAIVLGAGLLSGCTNAGEKTAVSYKGGTISEQEVMD--SLKKMQGADSTVQQL 58
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
V ++ + K G + V+ + Q + G + F S L G + FK
Sbjct: 59 IVYQVFED--------KYGDDVSTKEVDSQYDQTKKQLG---DSFDSQLKTAGYTEETFK 107
Query: 136 QYLAIQSIWPD 146
+ + +
Sbjct: 108 DSIKQSLAFQE 118
>gi|293391759|ref|ZP_06636093.1| SurA protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952293|gb|EFE02412.1| SurA protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 615
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 15/150 (10%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITD--GDISKR 59
V L + F+ + ++S + + SRI +NGE I+
Sbjct: 2 VMEKLHGASNNWASKFLFGFITVTFVISSMAGYLYSRIDSSAAKVNGEEISQQAFQNQYN 61
Query: 60 IALLKLQKINGE-------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR- 111
IA L + L++ + LI + L +Q ++ + + V
Sbjct: 62 IASQNLSPQEADSPTVVANLKRQVLSSLIDQELLRQYVKDLKLGVSDERIKQEIVTTPSF 121
Query: 112 NTGLSAEDFS--SFLDKQGIGDNHFKQYLA 139
++ L GI + Y+
Sbjct: 122 QNNGKFDNVLYQQLLQSNGISAETYAGYVR 151
>gi|225012326|ref|ZP_03702762.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium MS024-2A]
gi|225003303|gb|EEG41277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium MS024-2A]
Length = 704
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 10/129 (7%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE--------KFASKIHDVSIGKAQ 235
+ + + V + +A+ R+ K + +++ G
Sbjct: 353 ILIAFNGATRAPSEVSRTKAEAKSEANRVYKMARRASSDFEALVREYSDGPTKTRGGDLG 412
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG--GEIALKAYLSAQNT 293
+ E D+ + N K++ T+ G + + DK DL ++ A S +
Sbjct: 413 FFREGDMAQELFNFTNKNKVGNIGLVETEFGFHIVKVTDKDDLALIADVVAAAVPSDKTA 472
Query: 294 PTKIEKHEA 302
Sbjct: 473 NEVFRNATQ 481
>gi|149202954|ref|ZP_01879925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp.
TM1035]
gi|149143500|gb|EDM31536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Roseovarius sp.
TM1035]
Length = 283
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 83/304 (27%), Gaps = 53/304 (17%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE- 73
LL+T ++ I + + + T+ G IT G + A L Q E
Sbjct: 5 LLSTAALVSGLAIGAQAFAQDTPSAETVMATVGGTDITLGHMLAVRASLPAQYDQVPPEA 64
Query: 74 --KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K + +LI + L Q A LS +
Sbjct: 65 LFKGVLDQLIQQELLSQ---------------------AHEGDLSRAAALQL-------E 96
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
N + LA +VV D + ++ + Q EY +L +
Sbjct: 97 NERRAVLAADVA-EEVVNADLTEE----RLQAAYDAQYAGAEDETEYKAAHILVETEE-- 149
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDL-HPQFQNL 249
L + L + S S G + + + F +
Sbjct: 150 ----------AAQNLVIELEGGANFAALAQEHSIGPSGPSGGDLGWFGDGVMVPEFFAAV 199
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ P TQ G I + + R E + + T T ++ ++ R
Sbjct: 200 AALDVGAVSAPIQTQFGWHVIQLNETR--IKERPTLDGVRDELTNTLRQEAFDAFIAA-R 256
Query: 310 SNAI 313
A
Sbjct: 257 EAAT 260
>gi|268315855|ref|YP_003289574.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
gi|262333389|gb|ACY47186.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodothermus marinus
DSM 4252]
Length = 552
Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 8/127 (6%)
Query: 199 QKRIKDAEESRLRLPKDCNKLEK--FASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
+ ++ +RL+ +L F S G + ++ P F+++ +
Sbjct: 132 TRAAAESLYARLQAGASFEELAAGVFRDTALARSGGDLGWFSFDEMDPAFEDVAFRLRPG 191
Query: 256 NTTNPYVTQKGVEYIAICDK--RDLGGEI---ALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
++P T G I + D+ + + E + L K + + L
Sbjct: 192 EISSPVRTAYGYSIIQVTDRFTKPILTETEFAQKRPLLERYLRYRKQQAAREACARSLAD 251
Query: 311 NAIIHYY 317
+ I ++
Sbjct: 252 SLQIRFH 258
>gi|34540273|ref|NP_904752.1| hypothetical protein PG0452 [Porphyromonas gingivalis W83]
gi|34396585|gb|AAQ65651.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
Length = 715
Score = 42.7 bits (99), Expect = 0.074, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIALLKLQ------ 66
++ L F I + S + S + INGE I D +R+ ++ +
Sbjct: 15 IVVVGVALFAFIIGDFLRSGSTFFRQSQEVVLDINGEKIKIYDYQQRLKAMEKRAEQSGT 74
Query: 67 ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ L Q+ + + + Q+ +K G+T + + + A+ F S
Sbjct: 75 KITDEQRASLNNQLAQQYVQDYVLGQQADKLGLTVSPEELLALIIGDGVQPSMFAQQFFS 134
Query: 123 FLDKQGIGDNHFKQYL 138
G +L
Sbjct: 135 RFGINGSDRAAVNDFL 150
>gi|257897789|ref|ZP_05677442.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
Com15]
gi|257835701|gb|EEV60775.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
Com15]
Length = 303
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 49/131 (37%), Gaps = 13/131 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ F+ + + + + + G I++ ++ +L K+Q + ++++
Sbjct: 1 MKKRFLALAIVLGAGLLSGCTNAGEKTAVSYKGGTISEQEVMD--SLKKMQGADSTVQQL 58
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
V ++ + K G + V+ + Q + G + F S L G+ FK
Sbjct: 59 IVYQVFED--------KYGDDVSTKEVDSQYDQTKKQLG---DSFDSQLKTAGLTKETFK 107
Query: 136 QYLAIQSIWPD 146
+ + + +
Sbjct: 108 DSIKQRLAFQE 118
>gi|323466054|gb|ADX69741.1| Foldase protein prsA 1 [Lactobacillus helveticus H10]
Length = 306
Score = 42.7 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 83/265 (31%), Gaps = 32/265 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 47 ITQQQYYDEMKKSQAGKSALA-NMIINRALEQQ----YGKYVSSKKVDKQYNNYKKQYG- 100
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FKQ L + + ++ + KQ+ +
Sbjct: 101 --SQFSAVLQQNGMTASTFKQNLKTNL----------LSEAALKHIKKISKKQEQQAWKN 148
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ + + K++KD + + K GK
Sbjct: 149 YQPKVTVQHILVAKKSTAESII--KQLKDGKSFKSLAKKYSLDTATKNKA------GKLP 200
Query: 236 YLLESD--LHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+D L F+ K T +P +Q G I + G K + +
Sbjct: 201 AFDSTDNTLDSAFKTAAFKLKTGEVTESPAKSQSGYHVIKMISHPAKGKFADHKKAIDDE 260
Query: 292 NTP--TKIEKHEAEYVKKLRSNAII 314
+ + + + + A +
Sbjct: 261 IYASMAQDQAVMKDVIATVLKKADV 285
>gi|298252715|ref|ZP_06976509.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis 5-1]
gi|297533079|gb|EFH71963.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis 5-1]
Length = 422
Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 26/64 (40%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+K E ++ A +EL + + E+ +T V F V A+ G+ F + +
Sbjct: 297 TKKQKDEAQQAAEKELRDQMVLDALAEQMDVTVSQADVTNFLVSVAQQYGMDPNQFINAI 356
Query: 125 DKQG 128
G
Sbjct: 357 VNNG 360
>gi|219852695|ref|YP_002467127.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanosphaerula
palustris E1-9c]
gi|219546954|gb|ACL17404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanosphaerula
palustris E1-9c]
Length = 93
Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 12/104 (11%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
V++ +L K Q + ++ L +K++ G+
Sbjct: 1 MVKQVSAAHILVKT---KDQAEDLKKQISAGGNFGEL--------AKKYSECPSGKKGGE 49
Query: 234 AQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ + + P+F+ + + + + P TQ G I I ++
Sbjct: 50 LGWFGKGMMVPEFEKVAFEGKEGDVVGPVKTQFGFHLIKILGQK 93
>gi|72386957|ref|XP_843903.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trypanosoma
brucei TREU927]
gi|62359031|gb|AAX79480.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative
[Trypanosoma brucei]
gi|70800435|gb|AAZ10344.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 122
Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
R +A E +++ + + + S+ S G ++ + +F + + T
Sbjct: 46 RALEALE-KIKAGESFANVARDYSEDKARSGGDLGWVTRGAMVGEFSEKAFALPKGGMTQ 104
Query: 260 -PYVTQKGVEYIAICDKR 276
P T+ G I + DK+
Sbjct: 105 EPVKTKFGYHIIFVEDKQ 122
>gi|88803460|ref|ZP_01118986.1| peptidyl-prolyl cis-trans isomerase [Polaribacter irgensii 23-P]
gi|88781026|gb|EAR12205.1| peptidyl-prolyl cis-trans isomerase [Polaribacter irgensii 23-P]
Length = 460
Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 83/271 (30%), Gaps = 12/271 (4%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K ++F + + + I ++ D DI+K ++L+
Sbjct: 9 KYTKVLLTAVLFSVSIFQVHAQKIKIDGVAVVIGKNIVLDSDIAKFKQEIELRSEGKITI 68
Query: 74 K--IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-G 130
++EL+ + L +T V+ + + + G
Sbjct: 69 TDCEMLEELMQQKLLSHHAVIDSVTVSDAEVSNKVERSIQFFTQEYGSLEKVVSAYGFND 128
Query: 131 DNHFKQYLAIQSIWPDVVKNDFM---LKYGNLEMEIPANKQKMK-NITVREYLIRTVLFS 186
K L +V+ + + K E+ +K N + E+ L
Sbjct: 129 LEDLKGELYNVQKDNILVEKEQLKITEKVDVTPEEVRLYFNGLKENGELPEFTAEIELAQ 188
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCN-KLEKFASKIHDVSIGKAQYL---LESDL 242
I N + + ++ + R + + + +++ + + ES+
Sbjct: 189 IVLNSVPTDAEELRVLEQLTQIRKEVLEGASFRMKAIINSKDPGVTRDNGLMEVTKESNF 248
Query: 243 HPQFQNL-LKKSQNNTTNPYVTQKGVEYIAI 272
+F+ + Q+ + P+ T G I +
Sbjct: 249 IKEFKEVSFSLEQDEISKPFKTLFGYHIIKL 279
>gi|188995374|ref|YP_001929626.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas
gingivalis ATCC 33277]
gi|188595054|dbj|BAG34029.1| putative peptidyl-prolyl cis-trans isomerase [Porphyromonas
gingivalis ATCC 33277]
Length = 715
Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 12/136 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIALLKLQ------ 66
++ L F I + S + S + INGE I D +R+ ++ +
Sbjct: 15 IVVVGVALFAFIIGDFLRSGSTFFRQSQEVVLDINGEKIKIYDYQQRLKAMEKRAEQSGT 74
Query: 67 ----KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
+ L Q+ + + + Q+ +K G+T + + + A+ F S
Sbjct: 75 KITDEQRASLNNQLAQQYVQDYVLGQQADKLGLTVSPEELLALIIGDGVQPSMFAQQFFS 134
Query: 123 FLDKQGIGDNHFKQYL 138
G +L
Sbjct: 135 RFGINGSDRAAVNDFL 150
>gi|120610416|ref|YP_970094.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
gi|120588880|gb|ABM32320.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
Length = 642
Score = 42.7 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 61/201 (30%), Gaps = 9/201 (4%)
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQ--YLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
A + ++ S+ + F+Q + +Q + D+ + ++
Sbjct: 201 DFAAKVAPTDDELQSYYKAH---EAQFRQPEHADVQYVVLDLDAVRASITLSEDDLRSYY 257
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFAS 224
+ + E +L + P + + A ++R P ++ + S
Sbjct: 258 KENLERLAGKEERRASHILINAPKDAPAADREKARARAQALLEQVRKAPGTFAEVARKNS 317
Query: 225 KIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
+ S G + D+ F++ + + ++ ++ G I + D +
Sbjct: 318 QDTGSAPSGGDLGFFKRGDMVKPFEDAAFSMKKGDISDLVESEYGYHIIQLNDVKTPRQP 377
Query: 282 IALKAYLSAQNTPTKIEKHEA 302
+ + + +
Sbjct: 378 TFEEVRAKLETEAKQQQAQRK 398
Score = 39.6 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 56/165 (33%), Gaps = 19/165 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKINGEL 72
++ + ++I ++ + + S + ++G IT D D + R+ +++ + +
Sbjct: 13 MIVLFLLIIPSFVLVGIDRNYFTSKSAVVARVDGHDITQDDWDNAHRMETDRIRAQSPSV 72
Query: 73 EK----------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-------NTGL 115
+ ++ L+ + + + K + + + L
Sbjct: 73 DARLLDSPRARYATLERLVRDRVMQAAAVKMHLVTSDAQLARTLQGIPAIAALKRPDGSL 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
AE + + + QG+ F+ + + V+ + E
Sbjct: 133 DAEAYRALVGSQGLTPEGFESNVRRELSLSQVMGGVLGSAFAGQE 177
>gi|251791833|ref|YP_003006553.1| peptidyl-prolyl cis-trans isomerase D [Aggregatibacter aphrophilus
NJ8700]
gi|247533220|gb|ACS96466.1| peptidyl-prolyl cis-trans isomerase D (PPIase D)(Rotamase D)
[Aggregatibacter aphrophilus NJ8700]
Length = 615
Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 48/378 (12%), Positives = 100/378 (26%), Gaps = 85/378 (22%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD------GDISKRIALL 63
+++ F+ + F I + Y + + +NGE I+ +I+ R
Sbjct: 11 NNWASKFLFGFISVTFVISSMAGY-LYTRTDNSAAKVNGEEISQHAFQNQYNIASRNLSP 69
Query: 64 KLQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ + LI + L +Q + + + V N
Sbjct: 70 QEADSPAQVANLKRQILSSLIDQELLRQYTNELKLGVSDERIKQEIVTSPNFQNNGKFDN 129
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN---------------------DFMLKY 156
+ L GI + Y+ + ++
Sbjct: 130 ALYQQVLQTNGISAETYASYVREALRLEQLQGGLAITAFSVPAQRDALAKLFFQRRNIRL 189
Query: 157 GNLEMEIPANKQKMKNITVRE-YLIRTVLFSIPD-------------------------- 189
NL + KQ + + ++ Y F+IP+
Sbjct: 190 ANLSLADEIAKQTVTDAEIQAYYDAHKADFTIPESVKVQYLDLSGANMEKNINITDVEIA 249
Query: 190 -----NKLQNQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHDVSI--------G 232
NK Q Q+R+ E+ L FA + SI G
Sbjct: 250 QYYQDNKAQFTTQGQQRLAHIQVKTEQQAQDLYNQLQNGAAFADLAKNHSIDPTSAEKGG 309
Query: 233 KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG------GEIALK 285
++ + F++ + P I + +++D G + +
Sbjct: 310 DLSWVSAGEFPKVFEDAANALAVGQYSQPVKLDNNYHIILVKERKDAGVLPLENVKAQIA 369
Query: 286 AYLSAQNTPTKIEKHEAE 303
A + + E
Sbjct: 370 AQIRQNLINNQFFSVEKR 387
>gi|163759891|ref|ZP_02166975.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Hoeflea
phototrophica DFL-43]
gi|162282849|gb|EDQ33136.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Hoeflea
phototrophica DFL-43]
Length = 283
Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 92/311 (29%), Gaps = 56/311 (18%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSS--RIRTTINGEVITDGDISKRIALLKLQKINGEL 72
L+ ++F + + K +A + + + G I ++
Sbjct: 2 RLSQLAATLLFTSIAFLPAKGFAQEADDPVVAMVGGVEIRTSEL---------------- 45
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVN-YFFVQHARNTGLSAEDFSSFLDKQGIGD 131
++A +L ++ E+ + + ++ + A AE+
Sbjct: 46 -QMAEADL-DPQFERLPAEQRRVAALAAVIDIKALARKAE-----AEELDQT-------- 90
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSI 187
FK+ +A Q + F + + + + E R +L
Sbjct: 91 EEFKRLMAFQRD-RALHNVLFRSGVVESISDADVKARYDQEVAATQAEEEISARHILVET 149
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQF 246
D A + L KD +L K S + G Y + + P+F
Sbjct: 150 EDE------------AKALITELDAGKDFAELAKEKSTGPSAGNGGDLGYFTKGRMVPEF 197
Query: 247 -QNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ P TQ G I + D+RD ++ Q + + E
Sbjct: 198 EAAAFALEKGQYGKEPVKTQFGWHVIKVEDRRDAA--PPPFEQVADQIRQVLLRERYGEL 255
Query: 305 VKKLRSNAIIH 315
+++ R N I
Sbjct: 256 IREARDNVDIE 266
>gi|157690854|ref|YP_001485316.1| peptidylprolyl isomerase [Bacillus pumilus SAFR-032]
gi|157679612|gb|ABV60756.1| possible peptidylprolyl isomerase [Bacillus pumilus SAFR-032]
Length = 302
Score = 42.7 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 28/307 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTING---EVITDGDISKRIALLKLQKINGELEKI 75
F+L++ I +V S + + NG E I K L+K+ K
Sbjct: 10 TFILVLLMINAVVIAYVLTKSQMSQASSNGKSGEEIASIGKEKVTRQEWLKKMEDRYGKA 69
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-ARNTGLSAEDFSSFLDKQGIGDNHF 134
++++I + + Q +++ + S +N + A + F + + +
Sbjct: 70 TLEQMINQKVVNQLAKENKLEVSSKEINRELLMLKAVSNN--------FYEDGHTSEKDW 121
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + Q + ++ D ++ + NK + Y IR ++
Sbjct: 122 TEQIRYQILLEQLLTRDAVVSEKEAKSFYEKNKDLYQYDDS--YRIRHIVVKTKGEAENV 179
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQF--QNLLK 251
++ + + E+ + G ++ E P Q K
Sbjct: 180 ----------LKDLKGGSSFEAVAAERSIDRYTSPYGGDLGFVTEEQESIPALYIQEAQK 229
Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ T P T+ G I + +K D + + + E VK L
Sbjct: 230 LQPDEWTKEPIETKNGYAIIQLKEKLDGRSFSYEEVKNQIKRQIAMEDLGEKANVKTLWK 289
Query: 311 NAIIHYY 317
A + ++
Sbjct: 290 EAKVTWF 296
>gi|15618966|ref|NP_225252.1| hypothetical protein CPn1058 [Chlamydophila pneumoniae CWL029]
gi|15836589|ref|NP_301113.1| hypothetical protein CPj1058 [Chlamydophila pneumoniae J138]
gi|16753058|ref|NP_445331.1| hypothetical protein CP0792 [Chlamydophila pneumoniae AR39]
gi|33242430|ref|NP_877371.1| hypothetical protein CpB1100 [Chlamydophila pneumoniae TW-183]
gi|14195533|sp|Q9Z6K1|Y1058_CHLPN RecName: Full=Protein CPn_1058/CP_0792/CPj1058/CpB1100; Flags:
Precursor
gi|4377393|gb|AAD19195.1| CT355 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|7189707|gb|AAF38591.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979431|dbj|BAA99265.1| CT355 hypothetical protein [Chlamydophila pneumoniae J138]
gi|33236941|gb|AAP99028.1| hypothetical protein CpB1100 [Chlamydophila pneumoniae TW-183]
Length = 363
Score = 42.7 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 54/312 (17%)
Query: 34 KSWAMSSRIRTTINGE-VITDGDISKRIALLKLQKING-----ELEKI--------AVQE 79
A+ RI ++ E V+T D+ ++ LL ++
Sbjct: 49 SGLAIHDRILFKVDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLES 108
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGD 131
+I E L + + I D VN + +S D + +D+
Sbjct: 109 VIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNVIDRT---- 164
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
L Q + +V++ MLK G + +++ + +Y + T+ +
Sbjct: 165 ------LTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTES 218
Query: 190 NKLQNQGFVQKRIKDAE--------ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
Q V+ R+ +A+ + E+F+ + ++S Q L
Sbjct: 219 LASQIADKVRARLNEAKTWDKDRLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIG 278
Query: 242 LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEK 299
+ L P + G + + DK E +++ + + E
Sbjct: 279 YPKELCGL----------PKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQHLFALEAES 328
Query: 300 HEAEYVKKLRSN 311
E +Y +LR
Sbjct: 329 VEKQYKDRLRKR 340
>gi|257886569|ref|ZP_05666222.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,141,733]
gi|257822623|gb|EEV49555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,141,733]
Length = 303
Score = 42.3 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 48/131 (36%), Gaps = 13/131 (9%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ F+ + + + + + G I++ ++ +L K+Q + ++++
Sbjct: 1 MKKKFLALAIVLGAGLLSGCTNAGEKTAVSYKGGTISEQEVMD--SLKKMQGADSTVQQL 58
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
V ++ + K G + V+ + Q + G + F S L G + FK
Sbjct: 59 IVYQVFED--------KYGDDVSTKEVDSQYDQTKKQLG---DSFDSQLKTAGYTEETFK 107
Query: 136 QYLAIQSIWPD 146
+ + +
Sbjct: 108 DSIKQSLAFQE 118
>gi|226355966|ref|YP_002785706.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus deserti
VCD115]
gi|226317956|gb|ACO45952.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor
[Deinococcus deserti VCD115]
Length = 338
Score = 42.3 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 99/293 (33%), Gaps = 30/293 (10%)
Query: 35 SWAMSSRIRTTINGEVITDGDISK--RIALLKLQKING------------ELEKIAVQEL 80
S A S + I EVIT + ++ R A+ ++ G + +++
Sbjct: 41 SAAQDSAVVGRIGQEVITLAEFNRAFRQAVARVLNSQGVPFEESYMAEFNDARGEFLKQY 100
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLA 139
+ + Q + + D+ ++ AR S +F+ L G + L
Sbjct: 101 LRDRAVYQLA-RGSVKADAAEIDKQVAD-ARADFESDAEFADALSGTGYASEADLRADLE 158
Query: 140 IQSIWPDVVKN-DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
Q I +++ K+G+ + N + + RE R +L ++ + Q V
Sbjct: 159 RQLIVGTYLRSIQSRFKFGDAVVAGNYNLNRTSFMRQREACARHILVK---SQAEAQAVV 215
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
++ + +++ K + G E D+ F NT
Sbjct: 216 KELQAGGDFAKIATSKSQDPG-------SAAQGGDLGCFGEGDMVATFDKASFTGPLNTP 268
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKA--YLSAQNTPTKIEKHEAEYVKKLR 309
++ G + + + + G +A + Q T +K+ + K++
Sbjct: 269 QIVQSEFGWHVVLVSKRTEAGMVPLAEAAPVIREQLTREAAQKYLNSQIAKMK 321
>gi|224025971|ref|ZP_03644337.1| hypothetical protein BACCOPRO_02722 [Bacteroides coprophilus DSM
18228]
gi|224019207|gb|EEF77205.1| hypothetical protein BACCOPRO_02722 [Bacteroides coprophilus DSM
18228]
Length = 459
Score = 42.3 bits (98), Expect = 0.084, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 63/202 (31%), Gaps = 19/202 (9%)
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDF-----------SSFLDKQGIGDNHFKQY---LA 139
G + ++ + + + + + + L FKQ L+
Sbjct: 33 GKEVTDTELEAYYSRSPVRSRETPQRYFNHFLFFKLKVADALSMGWDTLPEFKQQYHVLS 92
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + P +VK M + + + ++ E+L L + Q
Sbjct: 93 GEMLKPVLVKRQEMKAFFQHQYQEEKSRLLTNTWVRTEFLT---LPLSQHPAKAEEDQAQ 149
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-QNNTT 258
+ A + ++ S+ + G ++ L P+ L+ + +
Sbjct: 150 SLMDSAYVALQNGMTFSELTSRYVSQKPQLKSG-TMWMPLVGLVPELAERLQNLDEGVVS 208
Query: 259 NPYVTQKGVEYIAICDKRDLGG 280
P+ + G+ + + D++D
Sbjct: 209 RPFYSPVGMHIVRLLDRKDGRD 230
>gi|261327012|emb|CBH09987.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative
[Trypanosoma brucei gambiense DAL972]
Length = 122
Score = 42.3 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTN 259
R +A E +++ + + + S+ S G ++ + +F + + T
Sbjct: 46 RALEALE-KIKAGESFANVARDYSEDKARSGGDLGWVTRGAMVGEFSEKAFALPKGGMTQ 104
Query: 260 -PYVTQKGVEYIAICDKR 276
P T+ G I + DK+
Sbjct: 105 EPVKTKFGYHIIFVEDKQ 122
>gi|270339925|ref|ZP_06006472.2| peptidyl-prolyl cis-trans isomerase [Prevotella bergensis DSM
17361]
gi|270333285|gb|EFA44071.1| peptidyl-prolyl cis-trans isomerase [Prevotella bergensis DSM
17361]
Length = 483
Score = 42.3 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 67/241 (27%), Gaps = 12/241 (4%)
Query: 48 GEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
E I DI + + + + ++L V+ L + I + V
Sbjct: 67 DEPILRSDIEMMRMQGMAEGISWGSNPDCAIPEQLAVQKLFLHQAAIDSIEVSESEVASG 126
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN---DFMLKYGNLEME 162
Q R +A + + N + L +++ + +
Sbjct: 127 VEQQIRRWIETAGGQEKLEEYRKQSVNEMRMSLHDDFKNQQLIQKMKQKLVEDIKVSPAD 186
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD---CNKL 219
+ + + ++ + I + Q + + R+ L
Sbjct: 187 VRRFFRSLPQDSIPFVPTEVEVQVIERSPKIKQEEINRVKDLLRSYTDRVTNGEITFATL 246
Query: 220 EKFASK--IHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ S+ + G+ Y+ L P F N+ + T G I + DK
Sbjct: 247 ARLYSEDPVSARVGGEMDYIGRGLLDPAFANVAFNLTDPKKISKIVETDFGFHIIQLIDK 306
Query: 276 R 276
R
Sbjct: 307 R 307
>gi|238791435|ref|ZP_04635073.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia intermedia ATCC
29909]
gi|238729051|gb|EEQ20567.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia intermedia ATCC
29909]
Length = 628
Score = 42.3 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERGRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDNKFDNNKYLELVNRMGYTPDQF 152
>gi|322372370|ref|ZP_08046906.1| foldase protein PrsA [Streptococcus sp. C150]
gi|321277412|gb|EFX54481.1| foldase protein PrsA [Streptococcus sp. C150]
Length = 380
Score = 42.3 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 13/124 (10%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
++ + VS + ++ G+ +T GD+ K + + ++ +
Sbjct: 77 VAVSALVGAGITYVSLGNKTTEETTLVSMKGDTVTVGDV------FDSLKGSSQTQQSVL 130
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
TL+K ++ G V+ + Q + G E FS L G + ++
Sbjct: 131 SA----TLQKALEKEYGSKVSKEDVDKAYKQASEQYG---EQFSQVLAAYGQTEESYRTQ 183
Query: 138 LAIQ 141
+ Q
Sbjct: 184 IRTQ 187
>gi|253999544|ref|YP_003051607.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylovorus sp.
SIP3-4]
gi|253986223|gb|ACT51080.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylovorus sp.
SIP3-4]
Length = 305
Score = 42.3 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 93/306 (30%), Gaps = 44/306 (14%)
Query: 16 LTTYFVLIIFCIVPIVSYKS--WAMSSRIRTTINGEVITDGDISKRIALL-KLQKINGEL 72
++ L + + KS S ++ ++G+ I+ +++ I + + + N +
Sbjct: 3 ISKGLALGLLSVTLFGCGKSDNKPESGQVAAKVDGKEISLLQLNQVIKNVPNVSEDNVDA 62
Query: 73 -EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
K + LI + L + V+ + A+ ++
Sbjct: 63 IRKQILDRLIDQQLILNKAYDEKFERTPEVVSAI--ETAKRDAIT--------------- 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ Y+ +V GN E++ R Y ++ + + N
Sbjct: 106 ---RAYV------SKLVATKVKP--GNQEVKTYFETHPELFTQRRVYNLQDIAIAPGANL 154
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+ ++ K ++ L K AS + +LK
Sbjct: 155 PGDLAAQVEKSKGMQDVAEWLKAGGVKFG--ASSYS---------KPAEQIATDALAVLK 203
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P V + + + K + + T T+ ++ + + +++
Sbjct: 204 NLKGGEIVPLTMDGNVHVVKLIGAVPAPMDFNQAKPLILSYLTNTQGQQLIKQELARMKE 263
Query: 311 NAIIHY 316
NA I Y
Sbjct: 264 NAKIEY 269
>gi|227892857|ref|ZP_04010662.1| peptidylprolyl isomerase [Lactobacillus ultunensis DSM 16047]
gi|227865359|gb|EEJ72780.1| peptidylprolyl isomerase [Lactobacillus ultunensis DSM 16047]
Length = 308
Score = 42.3 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 87/265 (32%), Gaps = 32/265 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 48 ITQQQYYDEMKKSQAGKSTLA-NMIINRALEQQ----YGKYVSSKKVDKQYNNYKKQYG- 101
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FK+ L + +++ + ++K
Sbjct: 102 --SQFSAVLQQNGMTASSFKENLKTNLLSEQ--------ALKHIKKVTKSQEEKAWKSYQ 151
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ ++ +L + K + K++KD + K GK
Sbjct: 152 PKVTVQHILVA----KKSTAETIIKQLKDGKSFSSLAKKYSLDTATKNKA------GKLP 201
Query: 236 YLLESD--LHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+D L F+ K + T P +Q G I + + G K + +
Sbjct: 202 AFDSTDNTLDSAFKTAAFKLTTGEVTSTPVKSQSGYHVIKMINHPAKGKFADHKKAIDDE 261
Query: 292 NTP--TKIEKHEAEYVKKLRSNAII 314
+ + + + + A +
Sbjct: 262 IYASMAQDQATMKDVISTVLKRADV 286
>gi|154706549|ref|YP_001423952.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway
5J108-111]
gi|154355835|gb|ABS77297.1| peptidyl-prolyl cis-trans isomerase [Coxiella burnetii Dugway
5J108-111]
Length = 522
Score = 42.3 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------KRIALLK- 64
L+ L +S ++ +NGE I++ +++ +R L+
Sbjct: 13 IAGLILAVVSLSFVLWGVQYYLQSEGGKNKTVAKVNGEKISENELNVVFQRLQRAYSLQR 72
Query: 65 ----LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSA 117
+ L++ A+Q LI+ + EK G +N N S
Sbjct: 73 GQTLVGAKAEALKEEALQNLIMNHVLLDSAEKMGFNISPAEINQIITVLPAFQENGKFSP 132
Query: 118 EDFSSFLDKQGIGDNHFKQYL 138
+ F FL + + F L
Sbjct: 133 QRFQQFLYENSLMSAQFVAQL 153
>gi|316964063|gb|EFV49351.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Trichinella
spiralis]
Length = 183
Score = 42.3 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 12/106 (11%)
Query: 177 EYLIRTVLFSIPDNKLQNQ--GFVQKRIKD-----AEESRLRLPKDCNKLEKFASKIHDV 229
+ +L +++ + V R K+ + R + + ASK D
Sbjct: 74 QVKCSHILVKHKNSRRPSSWKEAVITRSKEDALHLIQAYRDEISSGKAEFRTLASKYSDC 133
Query: 230 S----IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
S G Y + F+ + + P T+ G+ I
Sbjct: 134 SSAKNGGDLGYFKRGQMQKPFEEAAFALTLGELSQPVETESGIHII 179
>gi|298206780|ref|YP_003714959.1| putative exported peptidyl-prolyl cis-trans isomerase [Croceibacter
atlanticus HTCC2559]
gi|83849412|gb|EAP87280.1| putative exported peptidyl-prolyl cis-trans isomerase [Croceibacter
atlanticus HTCC2559]
Length = 496
Score = 42.3 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 38/321 (11%), Positives = 89/321 (27%), Gaps = 18/321 (5%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL 62
S + + +T + + + V+ D DI K A
Sbjct: 36 STAVQTKQVIVTESSTAVTETAAVQDTVKKPFKKFKVDGVAAVVGEYVVLDSDIDK--AY 93
Query: 63 LKLQKINGELEKIAV----QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
++L+ ++ I +L+ + L I + VN + Q
Sbjct: 94 IELKSQGISVQDITRCNLTGKLLEDKLYAHHAVIDSIMVNDAEVNAYVDQQIDYMKRQLG 153
Query: 119 DFSSFLD-KQGIGDNHFKQY---LAIQSIWPDVVKNDFMLKYGNLEMEIP---ANKQKMK 171
L+ Q + F+ + Q+ ++ + E+ K
Sbjct: 154 TMEKVLNFYQKDNEGEFRAELFEINKQNKLAGEMQRSIVDGIEITPEEVREYFNGIPKED 213
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ + + P+ + V R+ + L S+
Sbjct: 214 RPLFGDEIEIAQIIIQPEIPQAERQRVIDRLNEMRRDVLDNGASFATKAVLYSQDTGSRA 273
Query: 232 GKAQYLLESDLH--PQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
QY L +F++ + + P+ T+ G + + R ++ + L
Sbjct: 274 NGGQYSLTRKDPFVKEFKDAAFSLQEGEISEPFETEFGFHILMVDKIRGQTVDV--RQVL 331
Query: 289 SAQNTPTKIEKHEAEYVKKLR 309
+T + + + L+
Sbjct: 332 LVPDTTPESVNAARKQIDSLK 352
>gi|288871379|ref|ZP_06117355.2| trigger factor [Clostridium hathewayi DSM 13479]
gi|288863727|gb|EFC96025.1| trigger factor [Clostridium hathewayi DSM 13479]
Length = 441
Score = 42.3 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 42/116 (36%), Gaps = 10/116 (8%)
Query: 33 YKSWAMSSRIRTTINGEVI-TDGD---ISKRIAL--LKLQKINGELEKIAVQELIVETLK 86
+ S++ +N + + + + ++ + +++ AV+ I L
Sbjct: 316 IPEPMIDSQVNNMVNDYARRMQSQGLSLEQYMQFTGMTIETLKEQMKPQAVKR-IQTRLV 374
Query: 87 KQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ I K+ IT V A + + ++ + GI K+ LA+Q
Sbjct: 375 LEAIVKAENITVSDEAVEKEIADMAESYKMEVAQIKEYMGENGI--EQMKEDLAVQ 428
>gi|229091310|ref|ZP_04222528.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42]
gi|228692076|gb|EEL45817.1| Foldase protein prsA 1 [Bacillus cereus Rock3-42]
Length = 149
Score = 42.3 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 213 PKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
+D L K S+ G+ +F+ K + P T G
Sbjct: 24 GEDFAALAKQYSEDTGSKEQGGEITGFAPGQTVKEFEEAAYKLDAGQVSEPVKTTYGYHI 83
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VKKLRSNAII 314
I + DK++L +K + +++ ++ V +L +A I
Sbjct: 84 IKVTDKKELKPFDEVKDSIRKDIEQQRLQDTTGKWKQQVVNELLKDADI 132
>gi|238855146|ref|ZP_04645468.1| foldase protein PrsA [Lactobacillus jensenii 269-3]
gi|282932559|ref|ZP_06337981.1| foldase protein PrsA [Lactobacillus jensenii 208-1]
gi|313473154|ref|ZP_07813638.1| foldase protein PrsA [Lactobacillus jensenii 1153]
gi|238832227|gb|EEQ24542.1| foldase protein PrsA [Lactobacillus jensenii 269-3]
gi|239528600|gb|EEQ67601.1| foldase protein PrsA [Lactobacillus jensenii 1153]
gi|281303307|gb|EFA95487.1| foldase protein PrsA [Lactobacillus jensenii 208-1]
Length = 304
Score = 42.3 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 72/236 (30%), Gaps = 29/236 (12%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ L + + ++ G V+ + + + G S F S L++ G
Sbjct: 49 SSQAGKSTLANMIIYRALKQQYGKKVTQKQVDKEYNAYKKQYGSS---FESALEQNGYTT 105
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ FK+ + + + +++ +QK + ++ +L
Sbjct: 106 SSFKKNIETNLL--------TVAALKDIKKITSKQEQKAWKSYQPKVTVQHIL------- 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD--LHPQFQ 247
+K + +L+ L K S GK +D L F+
Sbjct: 151 -----VSKKSTAEDVIKQLKSGTSFATLAKKYSIDSATKNKGGKLTAFDSTDTTLDSDFK 205
Query: 248 NLLKKSQNN--TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
K +N TT P TQ G E I + G K + Q + +
Sbjct: 206 TAAFKLKNGEYTTTPVKTQSGYEIIKMIKHPSKGKFSDHKKEIDEQIYQSMEQDTT 261
>gi|316956573|gb|EFV46854.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Trichinella
spiralis]
Length = 183
Score = 42.3 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 12/106 (11%)
Query: 177 EYLIRTVLFSIPDNKLQNQ--GFVQKRIKD-----AEESRLRLPKDCNKLEKFASKIHDV 229
+ +L +++ + V R K+ + R + + ASK D
Sbjct: 74 QVKCSHILVKHKNSRRPSSWKEAVITRSKEDALHLIQAYRDEISSGKAEFRTLASKYSDC 133
Query: 230 S----IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
S G Y + F+ + + P T+ G+ I
Sbjct: 134 SSAKNGGDLGYFKRGQMQKPFEEAAFALTLGELSQPVETESGIHII 179
>gi|241206516|ref|YP_002977612.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860406|gb|ACS58073.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 293
Score = 42.3 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 56/290 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + L + V+ ++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKLAVLAFATFVALQAPAYADDAVIAKVGTLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I L + + + + +L + + +
Sbjct: 61 KKVAALSAAIDVKLLAADAAAEKLDQTD--------EFKKRM--------QYLTDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + + PD VK + + E+ A E R +L
Sbjct: 105 AYFKKHV-VDIVTPDEVKARY-------DKEVAAL------PKQEEVHARHILVKT---- 146
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + IK + KD +L K S + S G Y + +F++
Sbjct: 147 ---EDEAKDIIKQLDA-----GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQ 291
+ + P T G I + DKRD + + + +
Sbjct: 199 FALEKGTYSKTPVKTDFGFHVIKVEDKRDAPPPPFEQVQDQVRQLVMRDK 248
>gi|118581468|ref|YP_902718.1| hypothetical protein Ppro_3065 [Pelobacter propionicus DSM 2379]
gi|118504178|gb|ABL00661.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
Length = 527
Score = 42.3 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 4/112 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQG 128
L+K A+ LI L +E +K GIT + V+ ++ S + + L
Sbjct: 89 LKKAALNSLIDTALILKEAKKMGITASKDEVSGAIAAMPMFQKDGVFSFDLYQQLLKSNR 148
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
I F++ + I + + K + E +K + EYL
Sbjct: 149 ITAKEFEEAQQRELILKK-TRQAIINKVAVSDQEALDLFRKENDRIELEYLS 199
>gi|303272531|ref|XP_003055627.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463601|gb|EEH60879.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 985
Score = 42.3 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 44/161 (27%), Gaps = 18/161 (11%)
Query: 57 SKRIAL-LKLQKINGELEKIAVQE-LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+R + +Q+ +L A + + V+ LK + ++ + A G
Sbjct: 841 RQRAQMEAMMQRHEAQLAATAAENGMTVDQLKAEM--RANQEAAQQD---AMQKMAERNG 895
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
++ E + KQ L + + +N L+ E
Sbjct: 896 MTVEQLREAQE---------KQQL--EMMRQHAARNGMTLEEFKAAQEKQIAAAAAAEGV 944
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E V + Q+R + + +
Sbjct: 945 TVERFKELVQERQMAQRQMMAEMQQQRAAQMLAMKAKYSQA 985
>gi|161507900|ref|YP_001577864.1| peptidylprolyl isomerase [Lactobacillus helveticus DPC 4571]
gi|160348889|gb|ABX27563.1| PrtM precursor protein [Lactobacillus helveticus DPC 4571]
Length = 300
Score = 42.3 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 32/263 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 41 ITQQQYYDEMKKSQAGKSALA-NMIINRALEQQ----YGKYVSSKKVDKKYSNYKKQYG- 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FKQ L + +K + + + E A K +T
Sbjct: 95 --SQFSAVLQQNGMTASTFKQNLKTNLLSEAALK---HINKISKKQEQQAWKNYQPKVT- 148
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L + K + K++KD + + K GK
Sbjct: 149 ----VQHILVA----KKSTAESIIKQLKDGKSFKSLAKKYSLDTATKNKA------GKLP 194
Query: 236 YLLESD--LHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+D L F+ K T +P +Q G I + G K + +
Sbjct: 195 AFDSTDNTLDSAFKTAAFKLKTGEVTESPVKSQSGYHVIKMISHPAKGKFADHKKAIDDE 254
Query: 292 NTP--TKIEKHEAEYVKKLRSNA 312
+ + + + + NA
Sbjct: 255 IYASMAQDQAVMKDVIATVLKNA 277
>gi|112148583|gb|ABI13576.1| protease maturation protein precursor [Lactobacillus helveticus
CNRZ32]
gi|328464668|gb|EGF36014.1| peptidylprolyl isomerase [Lactobacillus helveticus MTCC 5463]
Length = 300
Score = 42.3 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 32/263 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 41 ITQQQYYDEMKKSQAGKSALA-NMIINRALEQQ----YGKYVSSKKVDKKYSNYKKQYG- 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FKQ L + +K + + + E A K +T
Sbjct: 95 --SQFSAVLQQNGMTASTFKQNLKTNLLSEAALK---HINKISKKQEQQAWKNYQPKVT- 148
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L + K + K++KD + + K GK
Sbjct: 149 ----VQHILVA----KKSTAESIIKQLKDGKSFKSLAKKYSLDTATKNKA------GKLP 194
Query: 236 YLLESD--LHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+D L F+ K T +P +Q G I + G K + +
Sbjct: 195 AFDSTDNTLDSAFKTAAFKLKTGEVTESPVKSQSGYHVIKMISHPAKGKFADHKKAIDDE 254
Query: 292 NTP--TKIEKHEAEYVKKLRSNA 312
+ + + + + NA
Sbjct: 255 IYASMAQDQAVMKDVIATVLKNA 277
>gi|29840067|ref|NP_829173.1| hypothetical protein CCA00302 [Chlamydophila caviae GPIC]
gi|29834415|gb|AAP05051.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 360
Score = 42.3 bits (98), Expect = 0.098, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 34/198 (17%)
Query: 34 KSWAMSSRIRTTIN-GEVITDGDISKRIALLKLQKING-----ELEKI--------AVQE 79
A+ R+ I+ V+T D+ +++ LL ++
Sbjct: 46 AGIAIHDRVLFKIDEDNVVTTLDVIQKLNLLFASSYPQLMDSYPARSQYYTAMWPVVLES 105
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGD 131
+I E L + + I DS TVN ++ ED + +++
Sbjct: 106 VIDEFLMVADAKTKKIQVDSTTVNEEIEAMFGRDLSPLYVHFDMTPEDVFNVVNRT---- 161
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
L Q + +V++ MLK G + + N TV +Y + T+ +
Sbjct: 162 ------LIAQRVMGMMVRSKVMLKVTPGKIREHYNQLAEDAANTTVWKYRVVTIKAATES 215
Query: 190 NKLQNQGFVQKRIKDAEE 207
Q V R+ + +
Sbjct: 216 LSSQIADKVCARLNETQS 233
>gi|317128176|ref|YP_004094458.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
cellulosilyticus DSM 2522]
gi|315473124|gb|ADU29727.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacillus
cellulosilyticus DSM 2522]
Length = 293
Score = 42.3 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 73/239 (30%), Gaps = 27/239 (11%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA-EDFSSFLDKQGIG-D 131
+ + L+ + +Q+ E+ GI V G+ E+F +FL Q + +
Sbjct: 58 EEVLTGLVQLRIIEQKAEELGI--TDEDVQQQIDDLKEGVGIDNDEEFYNFLASQQVRGE 115
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ K+ + + + ++ +K + E +L +
Sbjct: 116 DDLKERFLSHLVLEHLA----GHVGDPTDEDLQELYEKGE-----EVEASHILVYTEEEA 166
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL-LESDLHPQFQNL 249
L R+ +D L + S+ S G+ Y + + P
Sbjct: 167 LDIYE------------RIENGEDFATLAQDYSEDGSASQGGQLGYFGRGAMVAPFEVAA 214
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
N ++P +Q G I + D+ Y+ ++ + +L
Sbjct: 215 FNLDVNEVSSPVESQFGYHIIKVTDRLPFEAPFEEVRYMLEDTFNSQKVNKMMDAQDEL 273
>gi|262372262|ref|ZP_06065541.1| ppic-type ppiase domain-containing protein [Acinetobacter junii
SH205]
gi|262312287|gb|EEY93372.1| ppic-type ppiase domain-containing protein [Acinetobacter junii
SH205]
Length = 623
Score = 42.3 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 98/292 (33%), Gaps = 28/292 (9%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA 61
S IK +L++F +V I Y S + + ++NG+ I++ ++
Sbjct: 1 MESFRTLIKGWLGKVLLVLFLTPLALVGIEGYFSGGNKADVAKSVNGQDISNKELETATK 60
Query: 62 LLK---LQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ-- 108
K L + G+ +++ A+ LI +L +Q+ EK GI+ + Q
Sbjct: 61 NYKDQYLSLVKGDESLLNLSLIQEKALDALIARSLLQQQAEKLGISLSDTQLEQMLAQQP 120
Query: 109 -HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
N S + + ++L G+ + L + + + ++
Sbjct: 121 SFQENGQFSQKLYENYLRSVGMTNQGLIASLRQDHALKMI-----SSTLMDYALVSKSDL 175
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
Q++ N+ + + + D K Q+ + + + + N +
Sbjct: 176 QQLANLQTEQRTLHLASIKLDDYKKGITVSNQEIADYYNKHKNQFKQVANVDVDYVVLTP 235
Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
+ E++L ++ + K Q + + D RD
Sbjct: 236 ALLPQANVAPSEAELQQAYKAFVDKQQKDVKREVK-----HILITTDSRDAA 282
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 51/185 (27%), Gaps = 29/185 (15%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
K GIT + + ++ +H F + ++ V+
Sbjct: 199 KKGITVSNQEIADYYNKH-------KNQFKQV---ANVDVDYV------------VLTPA 236
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ + E + + ++ ++ + I +++ + ++++
Sbjct: 237 LLPQANVAPSEAELQQAYKAFVDKQQKDVKREVKHILITTDSRDAATAQKLANDVYAKIQ 296
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-----SQNNTTNPYVTQKG 266
S+ D S L+E+ F + P TQ G
Sbjct: 297 SGMSFADAAAQFSE--DPSSKTQGGLVEAYAPGVFSTDFDNAVNSLKNGQISKPVKTQYG 354
Query: 267 VEYIA 271
IA
Sbjct: 355 YHIIA 359
>gi|167749278|ref|ZP_02421405.1| hypothetical protein EUBSIR_00229 [Eubacterium siraeum DSM 15702]
gi|167657771|gb|EDS01901.1| hypothetical protein EUBSIR_00229 [Eubacterium siraeum DSM 15702]
Length = 472
Score = 42.3 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 24/235 (10%), Positives = 75/235 (31%), Gaps = 35/235 (14%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG------IGDNH-FKQYLAIQSIWPDV 147
IT + V+ + + + E +S I ++ + +Y+A+ D
Sbjct: 218 ITVSDSEVDDYITKLKAEAKQAYEKSASSYATDSEYKKVWIPEDARYIKYIAVGIASSDY 277
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + + K+ K ++E + ++K D +
Sbjct: 278 AEINAARNESGADDAEIDKKRDEKLAEIKE---------------KADAALKKATADGAD 322
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD--LHPQFQNLLKK--SQNNTTNPYVT 263
+++++S + + G+ +L S + + + + + T
Sbjct: 323 FD-------AVVKEYSSAYSESTAGEQILVLNSKGLISDALYDAVFALEKPGDISGLIPT 375
Query: 264 QKGVEYIA-ICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
G + + D + +++ + + + ++ + +++ RS Y
Sbjct: 376 DSGYYIVKYVSDAKVTDSDLSDYRKTVRQELLTSRQSEKTNAILEEWRSAVNYEY 430
>gi|284040908|ref|YP_003390838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
gi|283820201|gb|ADB42039.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
Length = 133
Score = 42.3 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 16/116 (13%)
Query: 178 YLIRTVLFSIPDN---------KLQNQGFVQKRIKDAEESRL----RLPKDCNKLEKFAS 224
Y + +L + + + N+ R + E +RL + +KL S
Sbjct: 4 YFLLVILLVLEASHSLYGQTLPETNNKTHYTDRTANREIARLYRKLKAGYAFDKLALEYS 63
Query: 225 KIHD--VSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + GK + P+F ++ + S++ + P+ T+ G + + DK+
Sbjct: 64 QDYGSFTAGGKLGWQKPDIFVPEFNQVISQMSKDQFSKPFKTEFGYHIVQLLDKKP 119
>gi|116254033|ref|YP_769871.1| foldase/peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|115258681|emb|CAK09785.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 293
Score = 42.3 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 94/290 (32%), Gaps = 56/290 (19%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALL--KLQKINGEL 72
+ + L + V+ ++ A + + + I ++ +A L +L ++ +
Sbjct: 1 MLSTNKLAVLAFATFVALQAPAYADDAVIAKVGTLEIHQSELDLAVANLDPQLAQLPDDQ 60
Query: 73 EK-IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+K A+ I L + + + + +L + + +
Sbjct: 61 KKVAALSAAIDVKLLAADAAAEKLDQTD--------EFKKRM--------QYLSDRELHN 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+FK+++ + + PD VK + + E+ A E R +L
Sbjct: 105 AYFKKHV-VDIVTPDEVKARY-------DKEVAAL------PKQEEVHARHILVKT---- 146
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL- 249
+ + IK + KD +L K S + S G Y + +F++
Sbjct: 147 ---EDEAKDIIKQLDA-----GKDFAELAKEKSTDPNKSEGGDLGYFSRGRMVKEFEDAA 198
Query: 250 LKKSQNNTT-NPYVTQKGVEYIAICDKRDLG-------GEIALKAYLSAQ 291
+ + P T G I + DKRD + + + +
Sbjct: 199 FALEKGTYSKTPVKTDFGFHVIKVEDKRDAPPPPFEQVQDQVRQLVMRDK 248
>gi|254360504|ref|ZP_04976653.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
gi|153091044|gb|EDN73049.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
Length = 623
Score = 42.3 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 37/348 (10%), Positives = 89/348 (25%), Gaps = 85/348 (24%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI---------------TDGDISKR 59
+ F L+ V +NGE I + ++ R
Sbjct: 13 VFKIIFALVSISFVIGGIGTGLISQDNSVAKVNGEEISQQLFNNTLNREQNRLNAELGSR 72
Query: 60 I-ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
L+ + + + + LI E L +Q ++ + ++ + V ++
Sbjct: 73 FWDLMDSPEYAAQFNQSVLNGLIDEELLRQYAKELKLGISADQIKSEIVNSQMFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV---------------------------V 148
S E + L + + + + + + V
Sbjct: 133 SNELYQQTLRHNNLSADGYAAIVQEGMLQSQLQEGIINSDFNVPAQQALLAKLLLQQREV 192
Query: 149 K------NDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ M E E+ A + K + E L + P + ++
Sbjct: 193 RLAEFSVAKEMENQTASEQELRAYYEANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQ 252
Query: 202 IK-------------------------DAEESRL----RLPKDCNKLEKFASK--IHDVS 230
I+ +AE + + +D L K S + +
Sbjct: 253 IQTYYDRNKADYVTKGEAHLAHIQVASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANN 312
Query: 231 IGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
G + F++ + + + I + +++
Sbjct: 313 GGDLGWAKAGTFPKAFEDAVANLTAGQMSAAVKVDNAYHIIKVLERKP 360
>gi|300813640|ref|ZP_07093965.1| conserved domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512246|gb|EFK39421.1| conserved domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 167
Score = 42.3 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 55/161 (34%), Gaps = 29/161 (18%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ---KI 68
F+K T + + + K + +N I D K A+ + Q
Sbjct: 2 FLKKFTAAVLSGLMLVSLSACGKGP---EGVAAKVNDVEIPMEDFYKSYAIRRNQYVANA 58
Query: 69 NGE----------------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
G+ L+ I +++L + KQ+ + I + + +
Sbjct: 59 GGDESVLEGPIDPTGKQSKLTVDQYLKDITIKDLTETEIIKQDAAANNIKVEDSEIQKIL 118
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
Q+ G E F ++LD GI ++ K+ L Q++
Sbjct: 119 DQYKAQLGGD-EQFKAYLDSLGIPLDYLKEVLKNQTLVGKY 158
>gi|194337592|ref|YP_002019386.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310069|gb|ACF44769.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 705
Score = 42.3 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDA-EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+L ++ V + ++ + P D + A + ++ G +
Sbjct: 350 ASHILLHFNPASREDVARVSQLSALIFKQLQAGTPFDALAKKYSADPVSALNGGDIGWFS 409
Query: 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + PQF + + P TQ G+ I +
Sbjct: 410 KERMVPQFAAAVFGARPGSVIGPVQTQFGLHIIKVTG 446
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGG--EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P T G + + K G A K+ ++ Q K E+ AEY+ LR
Sbjct: 636 PGKLSAPLKTSDGAALVLLSSKTVPAGLNRKAEKSAIAPQLLRAKQEQLFAEYIASLRKK 695
>gi|240949547|ref|ZP_04753887.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor NM305]
gi|240296120|gb|EER46781.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus minor NM305]
Length = 624
Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 40/231 (17%)
Query: 48 GEVITDGDI-SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
G + T D+ +++ AL KL ++ +A L E T + F+
Sbjct: 167 GIINTSFDLPAQQEALAKLLFQKRDVR-LATYSLADEA--------KNQTVSPEELQSFY 217
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
H + L+ E F+ ++ + ++ + + + ++ +
Sbjct: 218 EAHKKQL-LTPETFT--VEYLVLTPKDVEKRI----------------QITDEQIATYYD 258
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K K + +T E + + N+ + Q+ A+ + L K +K +
Sbjct: 259 KNKAQFVTKGEANLAHIQV---ANEAEANAIAQQLNNGADFATLAKEKSTDK-------L 308
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR 276
G + F+N + Q + P I + D++
Sbjct: 309 SAAQGGNLGWTKAGTFPQAFENAASQLQVGQVSQPIKIDNAYHIIKVIDRK 359
>gi|225075434|ref|ZP_03718633.1| hypothetical protein NEIFLAOT_00439 [Neisseria flavescens
NRL30031/H210]
gi|224953252|gb|EEG34461.1| hypothetical protein NEIFLAOT_00439 [Neisseria flavescens
NRL30031/H210]
Length = 290
Score = 42.3 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 97/302 (32%), Gaps = 33/302 (10%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----ELEKIAVQEL 80
F +++ S + ++ T+NG+ I I ++A ++ N EL ++ +
Sbjct: 6 FTSALMLALTSGTLFAQTLATVNGQAIDSSVIDDQVASVRASNPNVQDTPELRQMLTERQ 65
Query: 81 IVETLKKQEIEKSGITFDSN---TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++ T+ QE +K + + + A+ F + F+
Sbjct: 66 VISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAV-------FEND 118
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
L Q+ +V+ +Y E ++ A N +E + ++ N +
Sbjct: 119 LLGQAFAAHIVR-----QYPVQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSSSNAQKAI 173
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ + ++ K A I + L+ P + + +
Sbjct: 174 ADLDAKKSFVSVLN---QYSIDEAAKKAGGIPKAYV--PLKDLQESAPPLYAAVKDLKKG 228
Query: 256 -NTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+T P + D+R++ K + + +++ ++ L A
Sbjct: 229 AHTKTPLQNGNLYAVFYVNDRRNVTVPSYETAKNEIGSDLQAARVDAA----IQSLLKKA 284
Query: 313 II 314
I
Sbjct: 285 SI 286
>gi|291556857|emb|CBL33974.1| PPIC-type PPIASE domain [Eubacterium siraeum V10Sc8a]
Length = 472
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 20/231 (8%), Positives = 71/231 (30%), Gaps = 27/231 (11%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG------IGDNH-FKQYLAIQSIWPDV 147
IT + ++ + + + E +S I ++ + +Y+A+ D
Sbjct: 218 ITVSDSEIDDYITKLKAEAKQAYEKSASSYATDSEYKKVWIPEDARYIKYIAVGIASSDY 277
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + + K+ K ++E + ++K D +
Sbjct: 278 AEINAARNESGADDAEIDKKRDEKLAEIKE---------------KADAALKKATADGAD 322
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGV 267
+ + + + + + + + ++ F + + + T G
Sbjct: 323 FDAVVKEYSSAYSESTAGEQILVLNSKGLISDALYDAVFAL---EKPGDISGLIPTDSGY 379
Query: 268 EYIA-ICDKRDLGGEIA-LKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + D + +++ + + + ++ + +++ RS Y
Sbjct: 380 YIVKYVSDAKVTDSDLSNYRKTVRQELLTSRQSEKTNAILEEWRSAVNYEY 430
>gi|148260583|ref|YP_001234710.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum
JF-5]
gi|326403778|ref|YP_004283860.1| putative peptidylprolyl isomerase [Acidiphilium multivorum AIU301]
gi|146402264|gb|ABQ30791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidiphilium cryptum
JF-5]
gi|325050640|dbj|BAJ80978.1| putative peptidylprolyl isomerase [Acidiphilium multivorum AIU301]
Length = 248
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 50/163 (30%), Gaps = 8/163 (4%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + + + + T + +L + + + +
Sbjct: 77 VADVSEADCRAEFARHRARFRTPPLFEAAHILIAADMSSEDARAPARAEAARLASLLAAR 136
Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTN-PYVTQKGVEY 269
P +L + S G + D+ P+ ++L + P T+ G
Sbjct: 137 PDSFARLAREHSACPSGADGGGLGQITARDVTPEIASMLAAMTPGTICPVPVPTRHGYHL 196
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + D+R+ G ++ +A + + ++ R+ A
Sbjct: 197 LRL-DRREDGRDLPFEAV-RDRIRDHLRQ---RAWLDAARAYA 234
>gi|154149760|ref|YP_001403378.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Methanoregula boonei 6A8]
gi|153998312|gb|ABS54735.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanoregula boonei
6A8]
Length = 93
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
+ +L + D+ + + KRIKD E+ ++F+S S G
Sbjct: 1 MTTQVRASHILVTSEDDANK----ILKRIKDGEDFA-------AVAKRFSSCPSKKSGGD 49
Query: 234 AQYLLESDLHPQFQNLLKKS-QNNTTNPYVTQKGVEYIAICDKR 276
+ ++ + P+F+ + Q P +Q G I + K+
Sbjct: 50 LGWFGKNQMVPEFEAAAFAADQGTVVGPVKSQFGYHVIKVTGKK 93
>gi|71413418|ref|XP_808848.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Trypanosoma
cruzi strain CL Brener]
gi|70873138|gb|EAN86997.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative
[Trypanosoma cruzi]
Length = 124
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 14/114 (12%)
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A K + +R +L Q R +A + ++ + + S
Sbjct: 23 AAKDTSGGSGYTKVKVRHIL-----------CEKQGRAMEALK-KINEGSSFADIAREYS 70
Query: 225 KIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICDKR 276
+ S G + ++ FQ + T P T G I + DK+
Sbjct: 71 EDKARSGGDLGWKRRGEMVGPFQEAAFALPKGGMTPEPVRTSFGYHIILVEDKQ 124
>gi|330721963|gb|EGG99901.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium
IMCC2047]
Length = 154
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQK 67
I + +++ F + + + + S +NG+ I++ ++ + K LQ+
Sbjct: 12 GMIAKIIVGLIVLTFALFGVDAIVGNSGGSSKAAVVNGDEISEFELLRAADFFKRRMLQE 71
Query: 68 INGE----------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ + A++ELI L Q ++ I + V+ +Q
Sbjct: 72 MGANADPDLIDDQLVRARALEELIQRQLLLQAADEQAIFVANGRVDQAILQ 122
>gi|319789891|ref|YP_004151524.1| hypothetical protein Theam_0916 [Thermovibrio ammonificans HB-1]
gi|317114393|gb|ADU96883.1| hypothetical protein Theam_0916 [Thermovibrio ammonificans HB-1]
Length = 187
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQ 78
+ ++ +V S A S+++ +NG+ ITD D++ I L K N K ++
Sbjct: 4 LTVALLTLVVATSSAASAKVLAEVNGKKITDKDLNAAIDSLPPQYHTLKNNPTFRKRMLE 63
Query: 79 ELIVETLKKQEIEKSGITFDSN 100
L+ E L QE K G+ D
Sbjct: 64 NLVKEELLYQEALKEGLENDPA 85
>gi|307312948|ref|ZP_07592576.1| type III restriction protein res subunit [Escherichia coli W]
gi|306907116|gb|EFN37623.1| type III restriction protein res subunit [Escherichia coli W]
gi|315063583|gb|ADT77910.1| type III restriction enzyme, res subunit [Escherichia coli W]
gi|323380336|gb|ADX52604.1| type III restriction protein res subunit [Escherichia coli KO11]
Length = 1137
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T G++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQGELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|121592871|ref|YP_984767.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
gi|120604951|gb|ABM40691.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
Length = 278
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 19/148 (12%)
Query: 172 NITVREYLIRTVLFSIPDN-------KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+R VLF++ + + R D + +R ++++
Sbjct: 116 GGQGERVRMRHVLFAVTPGVDVKLLRQRAEGVLLDLRCADDDGARF-----AAAAGQWSN 170
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G +L D P+F + +Q + ++ G+ + +C+ R G E+
Sbjct: 171 CPSGQEGGDLGWLSAEDCAPEFAREVFGTQEVGVLSRLVHSRFGLHVVEVCE-RQPGQEL 229
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ ++ + + +V LR
Sbjct: 230 PFEQVRASVALMLRQQA----WVNALRQ 253
>gi|325521604|gb|EGD00389.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
TJI49]
Length = 207
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 71/224 (31%), Gaps = 50/224 (22%)
Query: 43 RTTINGEVITDGDISKRIALL--KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
+NG I +A L + Q + +L++ QEL+ + QE + GI +
Sbjct: 25 IAVVNGTPIPKSRADAMVAQLVQQGQTDSPQLQQAVRQELVNREILMQEAIRRGI-PNRA 83
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V +A Q++ + DF+ K +
Sbjct: 84 DVKAQVA------------------------------VAQQTVVLRAMIEDFLKKNQPTD 113
Query: 161 MEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
E+ A + REY + +L DN+ Q + + K A+
Sbjct: 114 AEVKARYDDLVKGVGGNREYHLHHILV---DNEQQAKDLIAKIKAGAK---------FED 161
Query: 219 LEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQ-NNTTN 259
L K SK + G + P+F +K Q T+
Sbjct: 162 LAKQYSKDPGSGKNGGDLDWSDPKAYVPEFAAAAQKLQKGQMTD 205
>gi|222087317|ref|YP_002545854.1| peptidyl prolyl cis-trans isomerase D signal peptide protein
[Agrobacterium radiobacter K84]
gi|221724765|gb|ACM27921.1| peptidyl prolyl cis-trans isomerase D signal peptide protein
[Agrobacterium radiobacter K84]
Length = 300
Score = 41.9 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 85/288 (29%), Gaps = 57/288 (19%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSR--IRTTINGEVITDGDISKRIALL--KLQKINGELEK 74
+ F + +A ++ + + I ++ IA L +L ++ + +K
Sbjct: 6 KLAAVAFATFVTLHAPVFADDAKDPVVAKVGDVEIHQSELDLAIANLDPQLGQLPDDQKK 65
Query: 75 -IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A+ I L ++ + +L + + + +
Sbjct: 66 VAALSASIDVKLLAKDAAAEKLDQTP-DFQSHMA---------------YLRDRELHNAY 109
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK ++A D VK + + E+ A E R +L
Sbjct: 110 FKAHVADGIT-DDEVKARY-------DKEVAAL------PKQEEVHARHILVKT------ 149
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLLESDLHPQFQNL-LK 251
+ + IK+ + KD L K S + G Y + +F++
Sbjct: 150 -EDEAKAIIKELDA-----GKDFATLAKEKSTDPNKADGGDLGYFAHGRMVKEFEDAAFA 203
Query: 252 KSQNNTT-NPYVTQKGVEYIAICDKR-------DLGGEIALKAYLSAQ 291
T P + G I + DKR D + + + +
Sbjct: 204 LPVGTYTKTPVKSDFGWHVIKVEDKRVAPPPPFDQVKDQVRQLVMRDK 251
>gi|325265502|ref|ZP_08132223.1| PPIC-type PPIASE domain protein [Clostridium sp. D5]
gi|324029250|gb|EGB90544.1| PPIC-type PPIASE domain protein [Clostridium sp. D5]
Length = 246
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 84/286 (29%), Gaps = 52/286 (18%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKI----NGELEKIAVQELIVETLKKQEIEKS 93
MS + + GE IT + + + + N + + +++LI L
Sbjct: 1 MSQEVLAVVAGEEITQEEFDAFMLNVPRDRQAYISNPQFRQQCLEQLIALHL-------- 52
Query: 94 GITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
F + L E + FL K+ + Q +++K
Sbjct: 53 ------------FAKMGGELKLDQTEKYEKFLVNA-------KRDILAQMAMEEIMK--- 90
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + E K + + +L D++ + ++
Sbjct: 91 DITVSDDEASAYYEANKQQFSKGEMVSAKHIL---TDSEEKCSAVLESITNG-------- 139
Query: 213 PKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
K + +S + G + +F++ + P +Q G I
Sbjct: 140 DKSFEDAARESSMCPSSENGGDLGKFGRGQMVKEFEDAAFAAEPGHVVGPVQSQFGYHLI 199
Query: 271 AICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY---VKKLRSNAI 313
+ ++++ L + + + + Y +K+L+ +
Sbjct: 200 KV-EEKEEAATAPLNEVIESIKMNMLQQMQSSAYSEMIKELKDKYM 244
>gi|261209199|ref|ZP_05923591.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
TC 6]
gi|289566116|ref|ZP_06446551.1| foldase prsA [Enterococcus faecium D344SRF]
gi|260076745|gb|EEW64480.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
TC 6]
gi|289162061|gb|EFD09926.1| foldase prsA [Enterococcus faecium D344SRF]
Length = 328
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+++L +I+ + A S T+ G IT D L
Sbjct: 1 MQILMKKKSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL------- 53
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ VQ +I+ + K G V+ + + A++ G + F S L+ G
Sbjct: 54 ESSNQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGY 107
Query: 130 GDNHFKQYLAIQSIW 144
+ +K+Y+ +
Sbjct: 108 TKDTYKEYIRNNLAF 122
>gi|227878123|ref|ZP_03996103.1| peptidylprolyl isomerase [Lactobacillus crispatus JV-V01]
gi|256843679|ref|ZP_05549167.1| peptidylprolyl isomerase [Lactobacillus crispatus 125-2-CHN]
gi|256850147|ref|ZP_05555577.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-1A-US]
gi|262047710|ref|ZP_06020663.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-3A-US]
gi|293380430|ref|ZP_06626499.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus crispatus
214-1]
gi|295693412|ref|YP_003602022.1| parvulin-like peptidyl-prolyl isomerase [Lactobacillus crispatus
ST1]
gi|227862293|gb|EEJ69832.1| peptidylprolyl isomerase [Lactobacillus crispatus JV-V01]
gi|256615099|gb|EEU20300.1| peptidylprolyl isomerase [Lactobacillus crispatus 125-2-CHN]
gi|256713119|gb|EEU28110.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-1A-US]
gi|260571995|gb|EEX28562.1| peptidylprolyl isomerase [Lactobacillus crispatus MV-3A-US]
gi|290923009|gb|EFD99942.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus crispatus
214-1]
gi|295031518|emb|CBL50997.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus crispatus
ST1]
Length = 298
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 84/261 (32%), Gaps = 24/261 (9%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I++ +++K +A +I L++Q G V+ + + + G
Sbjct: 41 ITQEQYYDEMKKSQAGKSTLA-NMIINRALEQQ----YGKYVSQKKVDKQYNNYKKQYG- 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FKQ + + +++ +Q+
Sbjct: 95 --SQFSAVLQQNGMTASSFKQNIKTNLLSEQ--------ALKHIKKVTKKQEQQAWKSYQ 144
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ ++ +L + K + K++KD + ++ K S
Sbjct: 145 PKVTVQHILVA----KKSTAQSIIKQLKDGKSFKVLAKKYSLDTATKNKAGKLPSFDSTD 200
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP- 294
L+S L K+ T+ P +Q G I + G K + Q
Sbjct: 201 TTLDSSFKTAAFKL--KTGEVTSTPVKSQSGYHVIKMISHPAKGKFADHKKAIDDQIYAS 258
Query: 295 -TKIEKHEAEYVKKLRSNAII 314
+ + + + + A +
Sbjct: 259 MAQDQATMKDVIATVLKKADV 279
>gi|194018008|ref|ZP_03056615.1| YacD [Bacillus pumilus ATCC 7061]
gi|194010345|gb|EDW19920.1| YacD [Bacillus pumilus ATCC 7061]
Length = 302
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 97/307 (31%), Gaps = 28/307 (9%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTING---EVITDGDISKRIALLKLQKINGELEKI 75
F+L++ I +V S + + NG E I K L+K+ K
Sbjct: 10 TFILVLLMINAVVIAYVLTKSQMSQASSNGKSGEEIASIGKEKVTRQEWLKKMEDRYGKA 69
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-ARNTGLSAEDFSSFLDKQGIGDNHF 134
++++I + + Q +++ + S +N + A + F + + +
Sbjct: 70 TLEQMINQKVVDQLAKENKLEVSSKEINRELLMLKAVSNN--------FYEDGHTSEKDW 121
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+ + Q + ++ D ++ + NK + Y IR ++
Sbjct: 122 TEQIRYQILLEQLLTRDAVVSEKEAKSFYEKNKDLYQYDDS--YRIRHIVVKTKGEAENV 179
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-PQF--QNLLK 251
++ + + E+ + G ++ E P Q K
Sbjct: 180 ----------LKDLKGGSSFEAVAAERSIDRYTSPYGGDLGFVTEEQESIPALYIQEAQK 229
Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ T P T+ G I + +K D + + + E VK L
Sbjct: 230 LQPDQWTKEPIETKNGYAIIQLKEKLDGRSFSYEEVKNQIKRQIAMEDLGEKANVKTLWK 289
Query: 311 NAIIHYY 317
A + ++
Sbjct: 290 EAKVTWF 296
>gi|187933209|ref|YP_001887564.1| foldase protein PrsA [Clostridium botulinum B str. Eklund 17B]
gi|187721362|gb|ACD22583.1| foldase protein PrsA [Clostridium botulinum B str. Eklund 17B]
Length = 247
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 74/233 (31%), Gaps = 15/233 (6%)
Query: 93 SGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQY-----LAIQSIWP 145
+G ++ ++ + E L +Q + + + + +
Sbjct: 10 AGNEIKDKDLDTVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKELKIDETEEYK 69
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++V+ L + + + V++Y I + + + K ++A
Sbjct: 70 NLVEGLAKEALTQLAINKVLADVTVTDEDVKKYYDDNSSMFINPPTVSAKHILVKTEEEA 129
Query: 206 EESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
+ + +K+++ G + + P+F+ + + + P
Sbjct: 130 TSIKEEIANGLAFEEAAKKYSTCPSKEQGGSLGNFGKGSMVPEFEKVAFESEVGKVSEPV 189
Query: 262 VTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
TQ G I + DK + + + A L Q + + E +K+L
Sbjct: 190 KTQFGYHLILVEDKTESTTVPFDQVKDAVLK-QLINERQQNKYLEMIKQLSDK 241
>gi|34498008|ref|NP_902223.1| peptidyl-prolyl cis-trans isomerase [Chromobacterium violaceum ATCC
12472]
gi|34103863|gb|AAQ60223.1| probable peptidyl-prolyl cis-trans isomerase [Chromobacterium
violaceum ATCC 12472]
Length = 612
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 8/156 (5%)
Query: 156 YGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL-P 213
+ E+ Q ++ + +L ++ + Q K +A +R+ P
Sbjct: 226 IKVSDAEVQKYYDQHKADLAGEQRRASHILLTVAKDAKPEQKAKVKAEAEAILKEVRVNP 285
Query: 214 KDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
+L K S+ + G + + F + + K ++ T+ G I
Sbjct: 286 AKFAELAKAKSQDPGSAEKGGDLGFFGHGMMVKPFDDAVFKMKPGQISDLVETEYGFHII 345
Query: 271 AICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAE 303
+ + + A L Q + +
Sbjct: 346 RLDAVKSQSLDDVKGAVVDKLQKQKAAALFHEQAGK 381
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 24/208 (11%), Positives = 57/208 (27%), Gaps = 20/208 (9%)
Query: 14 KLLTTYFVLIIFCIVPIVSYK-SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++ + V S A + I D+ + L+ Q +
Sbjct: 10 TVIQVILGAVALTFVGFGVGSYSSATDDPYLVKVGKTKIYKRDLDR---ALEGQPSDPAT 66
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGI 129
+ A++ LI + L E G + + N SA+ +S FL +
Sbjct: 67 RQAALENLIRQELLLAEARDHGAAVSPDQLRKAIASIPAFQENGQFSAQRYSEFLKSRYP 126
Query: 130 GDNHFKQYLAIQSI----WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
F+ ++ + V F+ + + + ++ ++
Sbjct: 127 NPEAFEADISRDILLQSQLSSVAGTQFVSNTVVTRVAGLLGEGRE---------LQPLVL 177
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLP 213
D + + + + R
Sbjct: 178 KPSDFASEVKTDAAAIKAYYDANAKRFS 205
>gi|121604540|ref|YP_981869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
gi|120593509|gb|ABM36948.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
Length = 645
Score = 41.9 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 37/386 (9%), Positives = 92/386 (23%), Gaps = 99/386 (25%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISK---------RIALLKL 65
+ F+LI+ + + + + + ++G IT + + R ++ L
Sbjct: 13 MALLFLLIVPSFILVGMNSNPSSEKGGVVAKVDGTEITQPEWDREHLKEVDRLRASMPTL 72
Query: 66 QKI---NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HAR----NTGL 115
+ E ++ ++ + + EK ++ + A + L
Sbjct: 73 DAKLLDSPEARYATLERMVRDRVVAVAAEKLKLSTSDQHLARELQNSPEIAALRRADGSL 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN----------------------DFM 153
+ + L QG+ F+ + V+ +
Sbjct: 133 DMDRYRQLLGTQGMSPEMFEANVRTDLSRRQVLAGVSGSGFASNSAADMALNAYFEKREI 192
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD------------------------ 189
+ A + Y LF P+
Sbjct: 193 QLARFNAADYAAKLTPTDADLEQYYKANEKLFQAPEQASIEYVLLDLEALKKGIAVNEAD 252
Query: 190 ---------------------------NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+K + +K AEE + K
Sbjct: 253 LKTYYEQNARQLSGTEERRASHILITASKTASPEEREKAKTKAEELLATVKKSPENFADV 312
Query: 223 ASK-----IHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKR 276
A K + G + + F++ ++ + + + G I + D +
Sbjct: 313 ARKNSQDPGSATNGGDLDFFARGAMVKSFEDAAFSMNKGDISEVVASDFGYHIIKLTDIK 372
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEA 302
+ + K + +
Sbjct: 373 APKQRTFEEMRPQLEAELQKQQAQKK 398
>gi|307243271|ref|ZP_07525442.1| PPIC-type PPIASE domain protein [Peptostreptococcus stomatis DSM
17678]
gi|306493399|gb|EFM65381.1| PPIC-type PPIASE domain protein [Peptostreptococcus stomatis DSM
17678]
Length = 255
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 73/230 (31%), Gaps = 40/230 (17%)
Query: 115 LSAEDFSSFLDK-QGIGDNHF-----KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
++ ED + + G F ++ + I ++ D + + + +
Sbjct: 15 ITQEDLEAAVASLDGYQRQQFDNEEGRKRILADMINQELFYLDAIENKMDQDEIFVNEME 74
Query: 169 KMKNITVREYLIRTVLFSIP---------------DNKLQNQGFVQKRIKDAEESRLRLP 213
+K +++Y I L ++ + K + + D EE L +
Sbjct: 75 LVKANMLKQYAINACLAAVEITDDEKLAYYEEHKDEFKEDESASAKHILVDNEELALEIE 134
Query: 214 KDCNK--------LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQ 264
K NK +++S + G + P+F+ + ++P TQ
Sbjct: 135 KKINKKEVSFEDAAVEYSSCPSKSNGGSLGTFGRGQMVPEFEEAVFTLPVGKVSSPVKTQ 194
Query: 265 KGVEYIAICDKRDL--------GGEIALKAYLSAQNTP--TKIEKHEAEY 304
G I + D+++ ++ QN K+ +Y
Sbjct: 195 FGYHLILVDDRKEARQLEYEDCKKDVEQSLAFKKQNEAFLAKLTDLTEKY 244
>gi|167621879|ref|YP_001676664.1| hypothetical protein Caul_5230 [Caulobacter sp. K31]
gi|167351620|gb|ABZ74350.1| hypothetical protein Caul_5230 [Caulobacter sp. K31]
Length = 1335
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 55/141 (39%), Gaps = 16/141 (11%)
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ ++ F + +D ++ L + D + ++ W D+V+ +
Sbjct: 664 SEIDAGF-------RPTPDDVAALLASPALSD---RSRPEVREAWRDIVRLAARPEGVPD 713
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ A + + + YL V +P+ +L+++ ++ D+E +R
Sbjct: 714 SVLAAAERYAQGDGELESYLRALVDPPVPEWQLKDEA---RKRADSEAREIRWAT---HR 767
Query: 220 EKFASKIHDVSIGKAQYLLES 240
FA+ I V +G+ +++
Sbjct: 768 TDFAANIEKVRVGELGWIVPP 788
>gi|125973074|ref|YP_001036984.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum ATCC 27405]
gi|256004577|ref|ZP_05429555.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum DSM 2360]
gi|281417269|ref|ZP_06248289.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum JW20]
gi|125713299|gb|ABN51791.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum ATCC 27405]
gi|255991449|gb|EEU01553.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum DSM 2360]
gi|281408671|gb|EFB38929.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum JW20]
gi|316940705|gb|ADU74739.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum DSM 1313]
Length = 413
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 74/214 (34%), Gaps = 36/214 (16%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDI----SKRIALLKLQKINGEL---------- 72
I PI + +S++ +NGE I D S++ A L + +
Sbjct: 41 ISPITKQLTEEEASKVIAEVNGEQILYKDFYFIYSQQAAYYGLTTEDEDSLSDDTKEILN 100
Query: 73 --EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-------FVQHARNTGLSA---EDF 120
+K + +LI + L KQ+ +++G ++ A LS+ +
Sbjct: 101 TIKKELLTQLIQQKLAKQKAKEAGYEVTKERLDEASEAIEEMIRNMAEQMKLSSPSEAES 160
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
FL + + ++ + + ++++ + + K+I V + I
Sbjct: 161 RDFLKEA-------RDFINSELKAMRITMDEYIRDTAEYMIVTDFMEDLTKDIVVTDEEI 213
Query: 181 RTVL---FSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ I + + + ++ SR++
Sbjct: 214 KKYYDEQLKIQQENPEEAAYAEVQLIQPASSRVK 247
>gi|77458729|ref|YP_348235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens Pf0-1]
gi|77382732|gb|ABA74245.1| putative peptidylprolyl isomerase [Pseudomonas fluorescens Pf0-1]
Length = 310
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 60/179 (33%), Gaps = 6/179 (3%)
Query: 141 QSIWPDVVKNDFMLKYG-NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q ++ D +++ + E+ K L R + N+ QN V+
Sbjct: 116 QIVFRDYLQSVSQVPADYPSAAELQQAYDAGKANWQTPALYRVSQIFLGVNEPQNLEAVR 175
Query: 200 KRIKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNN 256
K+ + + D L K S ++ G L P+ + ++ +
Sbjct: 176 KQATELSKKAQATSADFAGLAKEFSQDRLTAERGGDTGLQPLQQLVPEVRGVVARLKVGA 235
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
++P + G I + +++ L+ L+ + E+ Y+ + + A
Sbjct: 236 VSDPVQSSGGFHVIKLTEQQPARTATLDELRDQLTQALRAQRQEQIAQAYLDGMLNTAT 294
>gi|170748998|ref|YP_001755258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
radiotolerans JCM 2831]
gi|170655520|gb|ACB24575.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
radiotolerans JCM 2831]
Length = 277
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 9/145 (6%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQY 236
+ + +LFS ++ + + + P +L + S G
Sbjct: 122 FEVSHILFSARADEASSFALARLNAETVIAMLRTDPDTFAELARAHSACPSGELGGSLGQ 181
Query: 237 LLESDLHPQFQNLLKK-SQNNT-TNPYVTQKGVEYIAICDKRDLGGEI----ALKAYLSA 290
+ + P+F++ L++ + T P T+ G I + R + G A++ ++A
Sbjct: 182 VTQGQTTPEFEDALRRMTPGQVSTEPVETRYGFHVIRL--SRHIDGRTLPFEAVRTCIAA 239
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + EA+YV +L A +
Sbjct: 240 YLSEAVRRRAEAQYVARLLGQARVE 264
>gi|299471517|emb|CBN80003.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 316
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 1/145 (0%)
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E LK + + D++ + + A T LS E ++ L +
Sbjct: 130 IQEKLKLEAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTPASLRVEIASAKCEQ 189
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
Q LE ++ + + T RE + + + + K + G ++
Sbjct: 190 QEAERKAADARADSLQVELERATASHAKLKADTTQRERSLTKIQNILNERKAMSAG-LEA 248
Query: 201 RIKDAEESRLRLPKDCNKLEKFASK 225
+ K+ SR + +C L + +
Sbjct: 249 KTKELLASRASMEAECAVLREVVAS 273
>gi|302338344|ref|YP_003803550.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
smaragdinae DSM 11293]
gi|301635529|gb|ADK80956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirochaeta
smaragdinae DSM 11293]
Length = 511
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 44/351 (12%), Positives = 98/351 (27%), Gaps = 65/351 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----DGDISKR-------IAL 62
+ +++ F P +S+ S + + NGE I + +R A+
Sbjct: 32 SVFILVLIVVTFVGAPAISHFGSQRGSIVFGSWNGEPIEYRPDNYLSRQRDMVAKRYQAM 91
Query: 63 LKLQKINGELEKI-------AVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARN 112
+ + ++ A + ++ + +E +KSG+ V+ + + N
Sbjct: 92 FQQSQGQDNIDWQLFQVWNGAFELTVIHSAIMEEAQKSGLQVSDERVDRALTYYEGYWEN 151
Query: 113 TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
S E + + + + Y I V + F A K + +
Sbjct: 152 GKFSPEAYRNTSSSEKFSV---RNYYHESLIHQQWVSDVFSTHSS------SAEKAFLLS 202
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRI----KDAEESRLRLPKDCNKLEKFASKIHD 228
+ E R V + + + ++ + SR+ L D E ++ +
Sbjct: 203 LASPERNFRFVNWDLNSYPAEKVAEYGRQTGDLFAEGSFSRISLKDDKKSAEAVLKQLRE 262
Query: 229 VS------------------IGKAQYLLESDLH------PQFQNLLKKSQNNTTNPYVTQ 264
+ G+ Y++ L + + + T
Sbjct: 263 ETSTFEELATAHSTDIYADKGGEMGYVMRYALQSDISNDKDLDEVFSLAPGEASGLVETP 322
Query: 265 KGVEYIA----ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I D D + + S + +Y L
Sbjct: 323 YGWAIYRSNGPIRDA-DFTNDETIDKVRSYMLVNDRG--IVEDYFLDLGKT 370
>gi|238754239|ref|ZP_04615596.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia ruckeri ATCC 29473]
gi|238707486|gb|EEP99846.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia ruckeri ATCC 29473]
Length = 627
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL--LKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGGYLIGGSNDYA------AKVNGQEISRAQLEQSMQSERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +LI L Q ++ G++ V Q
Sbjct: 68 QQLGEQFSVLAGNEGYMQQLRQQILGQLINNMLLDQYAKQLGLSASDEQVKDSIRQLPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDNKFDNNKYLELVNRMGYTPDQF 152
>gi|269122654|ref|YP_003310831.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sebaldella
termitidis ATCC 33386]
gi|268616532|gb|ACZ10900.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sebaldella
termitidis ATCC 33386]
Length = 600
Score = 41.9 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 9/165 (5%)
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL--FSIPDNKLQNQGFVQKRIKDAEES 208
+ + + A+ +K+ + +Y IR + + + D + + K AEE
Sbjct: 328 RYFVYLVDSYNPSDADLKKIYDADQGKYDIRHSVGGYVVGDFFDPTEADKENTKKSAEEL 387
Query: 209 RLRL-PKDCNKLEKFASKIHDVS--IGKAQYLLE-SDLHPQFQNLLKKSQ-NNTTNPYVT 263
+ L P++ + K S+ G+ ++ ++ P+F +K +Q P T
Sbjct: 388 KKTLTPENFVETAKKVSEDPGSKDQGGELGWVDSNTNFVPEFLEAIKSAQKGQIIGPVQT 447
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ G I + D + K P E E V +L
Sbjct: 448 EFGSHIIYVEDVDSANPD--KKKVSHILLLPKPSEASRKELVDRL 490
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 29/160 (18%)
Query: 8 SLSDFIKLLTTYFVLIIFCIV---------PIVSYKSWAMSSRIRTTINGEVITDGDISK 58
+L F KL+ VL I ++ I + K+ ++ + +NG I D+ +
Sbjct: 2 ALRKFKKLMVPLSVLFIAAMLVPIFLKIGESIRAGKNIQQNNEVIAEVNGHKIHRLDLER 61
Query: 59 RIA--LLKLQKINGELEKIAVQ----------------ELIVETLKKQEIEKSGITFDSN 100
+A K+ +I + ++ EL+ L E I
Sbjct: 62 GVAGVKNKIMQIKSMKAQQGIEDNSEVPDDIIKKVILGELVSNALLVSSAEDLKIKASDK 121
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLA 139
+N + E F ++L GI + K+ +
Sbjct: 122 EINDKINEIKAGVA-KGESFLNYLQSMGIANEKELKRMIK 160
>gi|257880272|ref|ZP_05659925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,230,933]
gi|257882126|ref|ZP_05661779.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,502]
gi|257885317|ref|ZP_05664970.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,501]
gi|257890929|ref|ZP_05670582.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,410]
gi|260562427|ref|ZP_05832941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
C68]
gi|257814500|gb|EEV43258.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,230,933]
gi|257817784|gb|EEV45112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,502]
gi|257821173|gb|EEV48303.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,501]
gi|257827289|gb|EEV53915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,410]
gi|260073351|gb|EEW61692.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
C68]
Length = 340
Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+++L +I+ + A S T+ G IT D L
Sbjct: 1 MQILMKKKSIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL------- 53
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ VQ +I+ + K G V+ + + A++ G + F S L+ G
Sbjct: 54 ESSNQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGY 107
Query: 130 GDNHFKQYLAIQSIW 144
+ +K+Y+ +
Sbjct: 108 TKDTYKEYIRNNLAF 122
>gi|318061914|ref|ZP_07980635.1| lipoprotein [Streptomyces sp. SA3_actG]
Length = 255
Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 18/153 (11%)
Query: 43 RTTINGEVITDGDISKRIALL---------------KLQKINGELEKIAVQELIVETLKK 87
+ IT+ + R+ L ++ +G L + +Q ++ + +
Sbjct: 53 AAVVGNTRITEAQLQHRVGELHDAVRELSSDAQTSERIISGSGSLARPTLQGMVRDRVVA 112
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ G+T V Q + G +L + G+ + L +
Sbjct: 113 RAAADKGVTVSRAEVQSARAQLTQQAGGEQGLKVEWLTRYGVPPSRLDDALRENIAEQKL 172
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L + A K T ++ +
Sbjct: 173 YAA---LGADPSSPDGKATVDKTLAATAKKLKV 202
>gi|257092460|ref|YP_003166101.1| EpsD family peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044984|gb|ACV34172.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 320
Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 38/308 (12%), Positives = 89/308 (28%), Gaps = 52/308 (16%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
T V+++ ++++ +NG I+ I+ +A + + + + A
Sbjct: 13 TATIVMVLALTACSGKDDKTKSATQVAAKVNGGEISVHQINDVLA--RAGNVPADQARQA 70
Query: 77 ----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
++ LI + L QE + + + V
Sbjct: 71 SGKVLEGLIGQELLLQEAMEKKLDRTAPVVQAI--------------------------- 103
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+ K + + + + A K + Y +LFS
Sbjct: 104 -------------EAAKREILARAYVDSVTAQAGKPDAAEVHGY-YASNPLLFSARRIYN 149
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---GKAQYLLESDLHPQFQNL 249
N+ V + R+ + L A+ + + +I + L +
Sbjct: 150 INELGVAIAADKMPALQERVDRA-KSLNDVAAWLKEQNIPFNAGSGAKGAEQLPLNLLPI 208
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE-IALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + ++ G + + RD + + + K + +K+L
Sbjct: 209 VAEMRDGQIRLVTMPGGAAVLQLIASRDQPVDEQTARPAIEQFLANKKKSELAETEMKRL 268
Query: 309 RSNAIIHY 316
R+ A I Y
Sbjct: 269 RAAAKIEY 276
>gi|222109651|ref|YP_002551915.1| ppic-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus
TPSY]
gi|221729095|gb|ACM31915.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus
TPSY]
Length = 278
Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 50/148 (33%), Gaps = 19/148 (12%)
Query: 172 NITVREYLIRTVLFSIPDN-------KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+R VLF++ + + R D + +R ++++
Sbjct: 116 GGQGERVRMRHVLFAVTPGVDVKLLRQRAEGVLLDLRCADDDGARF-----AAAAGQWSN 170
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G +L D P+F + +Q + ++ G+ + +C+ R G E+
Sbjct: 171 CPSGQEGGDLGWLSAEDCAPEFAREVFGTQEVGVLSRLVHSRFGLHVVEVCE-RQPGQEL 229
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ ++ + + +V LR
Sbjct: 230 PFEQVRASVALMLRQQA----WVNALRQ 253
>gi|119386937|ref|YP_917992.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
gi|119377532|gb|ABL72296.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paracoccus
denitrificans PD1222]
Length = 267
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 5/141 (3%)
Query: 178 YLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
Y +LF+ P++ + E R + ++++ + G
Sbjct: 117 YEAAHILFAAAPEDTSARTEARARAEAVLAELRAEPRRFAELAARYSACSSKTAGGMLGQ 176
Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNT 293
L D P+F +L + T+ G+ I + D R G + ++ L +
Sbjct: 177 LTSGDTVPEFDAVLATMEEGALALAETRYGLHVIRL-DARARGEVLPFESVLPQLRQAHD 235
Query: 294 PTKIEKHEAEYVKKLRSNAII 314
+ +Y+ L + A I
Sbjct: 236 KAAWLRASRDYLDGLVAGAEI 256
>gi|258593862|emb|CBE70203.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 337
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 23/253 (9%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSFLDKQ 127
L+ V+ LI L E + G+ + + + TG + + L
Sbjct: 92 NLKGQVVEGLIGRHLLLHEANRLGLVISPDELVAEITAIPAFSDATGFKRDKYLRTLQSA 151
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
+ F++ L + V+ + E + + EY++
Sbjct: 152 RLTPERFEESLREDLLLRK-VEEWVKGGVHLIPDETWEAFRFNRASVKAEYVM-FSDLKT 209
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDLHPQF 246
+QN + K K EE AS + V+ + + Q
Sbjct: 210 QQAAVQNVAGLAKSNKPWEEI------------VRASGLKPVTSDFFSWDRSLPHIPDQE 257
Query: 247 Q---NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHE 301
+ L + + +K + + D++D KA S K E+
Sbjct: 258 RFKEAALVMERGAVSPIIQGEKASYLLRVIDRKDPDAAEFEREKAQFSRGLLQRKREQVF 317
Query: 302 AEYVKKLRSNAII 314
A++++++R+ A +
Sbjct: 318 ADWIRQVRARAKV 330
>gi|257894185|ref|ZP_05673838.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,408]
gi|257830564|gb|EEV57171.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,231,408]
Length = 340
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRI---RTTINGEVITDGDISKRIALLKLQKIN 69
+++L +I+ + A S T+ G IT D L
Sbjct: 1 MQILMKKNTIILAATSALAVLTLAACSGDTNKDIATMKGGTITVSDFYDEAKL------- 53
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+ VQ +I+ + K G V+ + + A++ G + F S L+ G
Sbjct: 54 ESSNQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGY 107
Query: 130 GDNHFKQYLAIQSIW 144
+ +K+Y+ +
Sbjct: 108 TKDTYKEYIRNNLAF 122
>gi|315149423|gb|EFT93439.1| putative foldase protein PrsA [Enterococcus faecalis TX0012]
Length = 341
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTEKSFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|294085490|ref|YP_003552250.1| PPIC-type PPIASE domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665065|gb|ADE40166.1| PPIC-type PPIASE domain protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 278
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 54/305 (17%)
Query: 20 FVLIIFCIVPIVSYKSWAMS-SRI-RTTINGEVITDGDISKRIALLKLQKINGELEK--- 74
+L FC + ++ + + A + SRI T+NGE I + + L + N ++
Sbjct: 3 VILRSFCAILMLIFATMAHAESRISVATVNGETIWLDQVMQAAEGLPPEYRNKPMQDYFG 62
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
V ++I L + E + + D V + A
Sbjct: 63 DIVADIIDTKLAAKAGEAAKL-ADDPLVQDAM-KLAS----------------------- 97
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK--MKNITVREYLIRTVLFSIPDNKL 192
+ + + W V ++ + + + + +L + D+ +
Sbjct: 98 -ERILAE-AWLAV-----TVREKMTDEALQQAYDTFVADEASREQITASHILVAAEDDAV 150
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251
+ AE ++ + ++ + G+ + P F+
Sbjct: 151 AIIKSLNDGADFAEIAKEK-----------STGPSGPNGGELGTFGRGQMVPAFETAAFA 199
Query: 252 KSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRS 310
+ P TQ G I + +K + Q + +H ++ LR+
Sbjct: 200 LPAGGFSAKPVQTQFGWHVIKVSEKAVKPA--PSFDAMRDQLVNSLSRQHLGRVIESLRA 257
Query: 311 NAIIH 315
+ I
Sbjct: 258 DQTIE 262
>gi|213024001|ref|ZP_03338448.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 215
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 43/128 (33%), Gaps = 8/128 (6%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-FVQHARNTGLSAE--DFSSFLDKQ 127
L + + LI E L Q + + V F A + +++ +++
Sbjct: 86 SLRQQVLNRLIDEALLDQYSRELKLGISDEQVKQAIFATPAFQVDGKFDNNRYNAIVNQM 145
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
G+ + + Q L Q ++ + + ++ + ++ ++R + +
Sbjct: 146 GMTADQYTQALRNQLTTQQLING-----VAGTDFMLKGETDELAALVSQQRVVREAVIDV 200
Query: 188 PDNKLQNQ 195
+ Q
Sbjct: 201 NALAAKQQ 208
>gi|89898508|ref|YP_515618.1| hypothetical protein CF0701 [Chlamydophila felis Fe/C-56]
gi|89331880|dbj|BAE81473.1| hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 360
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 67/198 (33%), Gaps = 34/198 (17%)
Query: 34 KSWAMSSRIRTTIN-GEVITDGDISKRIALLKLQKINGELEK-------------IAVQE 79
A+ R+ ++ V+T D+ ++ LL ++ + ++
Sbjct: 46 AGIAIHDRVLFKVDEDNVVTTLDVIHKLNLLFASSYPQLVDSYPARSQYYTAMWPVVLES 105
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARN--------TGLSAEDFSSFLDKQGIGD 131
+I E L + + I DS TVN ++ ED + +++
Sbjct: 106 VIDEFLMVADAKAKKIQVDSTTVNQEIEAMFGRDLSQFYVHFEMTPEDIFNVVNRT---- 161
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKY--GNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
L Q + +V++ MLK G + + TV +Y + T+ +
Sbjct: 162 ------LIAQRVMGMMVRSKVMLKVTPGKIREHYNQLAEDAAKTTVWKYRVVTIKAATES 215
Query: 190 NKLQNQGFVQKRIKDAEE 207
Q V R+ + +
Sbjct: 216 LSSQIADKVCARLNETQS 233
>gi|307352353|ref|YP_003893404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanoplanus
petrolearius DSM 11571]
gi|307155586|gb|ADN34966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanoplanus
petrolearius DSM 11571]
Length = 93
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
+K+++ G + + + +F++ + T P TQ G I I +
Sbjct: 35 AKKYSTCPSGRKGGDLGWFGKGMMVKEFEDASFSAKDGDVTGPVKTQFGYHIIKITGNK 93
>gi|294622205|ref|ZP_06701265.1| foldase protein PrsA [Enterococcus faecium U0317]
gi|291598247|gb|EFF29340.1| foldase protein PrsA [Enterococcus faecium U0317]
Length = 323
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K T V ++ S + I T+ G IT D L
Sbjct: 1 MKKNTIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------ESS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 TYKEYIRNNLAF 118
>gi|269123720|ref|YP_003306297.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Streptobacillus
moniliformis DSM 12112]
gi|268315046|gb|ACZ01420.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Streptobacillus
moniliformis DSM 12112]
Length = 599
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 10/164 (6%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+Y+A + + + + Y E E+ A K + ++ + + + +
Sbjct: 321 EYIAEEYV------SKLIGSYVATEEEMRAIFNKYQGAFDIQHTVSGEIIGMAYIPSDDD 374
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS 253
+ K E + ++ + SK + G ++ P+F+ + K+
Sbjct: 375 A-KETENKVIELMKTITKENFADKARELSKDPGSAQNGGDLGKANINNFVPEFRTAVAKA 433
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
+ + P TQ G I + +K + +IA ++ + +
Sbjct: 434 EAGSIVGPIKTQFGYHIILVEEKDENNKDIATLKHILIKVEAGE 477
>gi|159185780|ref|NP_357092.2| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens str.
C58]
gi|159140914|gb|AAK89877.2| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens str.
C58]
Length = 288
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 84/264 (31%), Gaps = 48/264 (18%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEK-I 75
+ + ++A ++ + I ++ + L +L ++ E +K
Sbjct: 6 KIAAAVIVATLGLQLPAFAQEDKVVAKVGDLEIHQSELDLAMGNLDPQLAQLPDEQKKVA 65
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A+ I L + + G+ + F+ + + + +F+
Sbjct: 66 ALSGAIDVKLLVKNADAEGLEKT--------EDFKKRM--------EFIKDRELHNAYFR 109
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+++ + ++ D VK + + L E E +L ++
Sbjct: 110 KHV-VDAVTNDEVKARYDKEVAALPQEE-------------EIKAAHILV-------ASE 148
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKS 253
+ IK + KD L K S + G + + + P+F+
Sbjct: 149 DEAKDIIKQLDS-----GKDFAALAKEKSTDSNKDDGGDLGWFGKGRMVPEFEEAAFGLE 203
Query: 254 QNNTT-NPYVTQKGVEYIAICDKR 276
+ T P TQ G I + DKR
Sbjct: 204 KGAYTKTPVKTQFGFHVIKLEDKR 227
>gi|294614167|ref|ZP_06694087.1| foldase protein PrsA [Enterococcus faecium E1636]
gi|291592943|gb|EFF24532.1| foldase protein PrsA [Enterococcus faecium E1636]
Length = 324
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + V ++ S + I T+ G IT D L
Sbjct: 1 MKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------ESS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 TYKEYIRNNLAF 118
>gi|238759258|ref|ZP_04620425.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia aldovae ATCC 35236]
gi|238702545|gb|EEP95095.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia aldovae ATCC 35236]
Length = 628
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 47/145 (32%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA--LLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDYA------AKVNGQDISRAQLEQAMQSERGRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G++ V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAQKLGLSASDAQVKEAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G F
Sbjct: 128 QTDNKFDNNKYLELVNRMGYTPEQF 152
>gi|333026460|ref|ZP_08454524.1| putative lipoprotein [Streptomyces sp. Tu6071]
gi|332746312|gb|EGJ76753.1| putative lipoprotein [Streptomyces sp. Tu6071]
Length = 277
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 18/153 (11%)
Query: 43 RTTINGEVITDGDISKRIALL---------------KLQKINGELEKIAVQELIVETLKK 87
+ IT+ + R+ L ++ +G L + +Q ++ + +
Sbjct: 75 AAVVGNTRITEAQLQHRVGELHDAVRELSSDAQTSERIISGSGSLARPTLQGMVRDRVVA 134
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ G+T V Q + G +L + G+ + L +
Sbjct: 135 RAAADKGVTVSRAEVQSARAQLTQQAGGEQGLKVEWLTRYGVPPSRLDDALRENIAEQKL 194
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L + A K T ++ +
Sbjct: 195 YAA---LGADPSSPDGKATVDKTLAATAKKLKV 224
>gi|325122070|gb|ADY81593.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter
calcoaceticus PHEA-2]
Length = 582
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +LI+F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
L + G+ ++ A+ L+ L Q+ EK GI+ + Q
Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQ 118
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 45/145 (31%), Gaps = 9/145 (6%)
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
N FKQ ++ + + + E E+ K + ++ + + I
Sbjct: 218 NEFKQQASVDVDYVVLSPSMMAKPAPATEAELQQAY--AKFVETQKKDAKRTVKHILITT 275
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
+++ ++++ + S+ D S L+E+ F +
Sbjct: 276 DARDDAAAQKLAKEVYAKIQGGLSFAQAASQFSE--DPSSKAKGGLVEAYAPGVFSDAFD 333
Query: 252 KS-----QNNTTNPYVTQKGVEYIA 271
K+ + P TQ G I
Sbjct: 334 KTVLSLKNGQVSQPVKTQYGYHIIE 358
>gi|284989497|ref|YP_003408051.1| hypothetical protein Gobs_0918 [Geodermatophilus obscurus DSM
43160]
gi|284062742|gb|ADB73680.1| hypothetical protein Gobs_0918 [Geodermatophilus obscurus DSM
43160]
Length = 343
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 74/237 (31%), Gaps = 27/237 (11%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+ LT + + + + +S + + E +T G++ R A+ + E
Sbjct: 17 RRLTASLAVGLVALAGVAGCRS---DPGVAAYVGDERVTVGEL--RTAVDTRLEDPALAE 71
Query: 74 KIA----------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
A ++ L+ L + ++ G+T D V + G E +
Sbjct: 72 AAAGREDEFTRLVLRRLVEAELYDRFAQRYGVTVDDGDVRARLDELLA--GEDPEAVYAQ 129
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
QG+ + + Q + V ++ +++ G E E+ A + + ++ + + V
Sbjct: 130 AASQGVARADVFETVRQQVLRQRVAESQGLVR-GLSEEELRAAYE-EQAPSLAQVRLGYV 187
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
+Q + P + +V+ +
Sbjct: 188 NVPDQGAADAAVATLQADPGAYPAIAAQFPGAT--------TLPEVATRAPDQVPAP 236
>gi|226311741|ref|YP_002771635.1| hypothetical protein BBR47_21540 [Brevibacillus brevis NBRC 100599]
gi|226094689|dbj|BAH43131.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 246
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 14/148 (9%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEV---ITDGDISKR 59
S+VF + +L +++ + K A S+ I + I++
Sbjct: 26 SEVFFMKKFNVSILAASALVLGLAVAGCTPGKDSAFSA-------DNPVAKIGNVTITQE 78
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
KL+K G K + ++I L KQE GIT ++ G S E
Sbjct: 79 QMYDKLKKDAG---KRVMADIITLELYKQEGAARGITVTDQELDARVNPVKEKLG-SPER 134
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
F +L + + + ++ + + +
Sbjct: 135 FQQYLKDKQMTEQELREGVRAVMLRDKL 162
>gi|332716317|ref|YP_004443783.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium sp. H13-3]
gi|325063002|gb|ADY66692.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium sp. H13-3]
Length = 287
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 80/264 (30%), Gaps = 48/264 (18%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALL--KLQKINGELEK-I 75
+ + + ++A ++ + I ++ + L +L ++ E +K
Sbjct: 6 KIAAAVIVATLGLQFPAFAQEDKVVAKVGDLEIHQSELDLAMGNLDPQLAQLPDEQKKVA 65
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A+ I L + G+ + F+ + + + +F+
Sbjct: 66 ALSGAIDVKLLVKNASAEGLEKT--------EDFKKRM--------EFIQDRELHNAYFR 109
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+++ + ++ + VK + + L E E +L
Sbjct: 110 KHV-VDAVTNEEVKARYDKEVAALPKEE-------------EIKAAHILV------ASED 149
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKS 253
+ L KD L K S + G + + + P+F+
Sbjct: 150 EAKDVIKQ------LDAGKDFAALAKEKSTDSNKDDGGDLGWFGKGRMVPEFEEAAFGLE 203
Query: 254 QNNTT-NPYVTQKGVEYIAICDKR 276
+ T P TQ G I + DKR
Sbjct: 204 KGAYTKTPVKTQFGFHVIKLEDKR 227
>gi|86160748|ref|YP_467533.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777259|gb|ABC84096.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 356
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 91/295 (30%), Gaps = 57/295 (19%)
Query: 43 RTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
T NG IT G++ R+ ++ + E +K + L+ + +E E+ G+ +
Sbjct: 32 VATGNGFTITAGELKARLDEQSPFIRARYSTLERKKEFLDNLVRFEVLAREAERQGL-AN 90
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V + + +Q +V+ +F G
Sbjct: 91 DPEVQLTL-----------------------------KKVMVQ----KLVQKNFQDASGA 117
Query: 159 LEMEIP-ANKQKMKNITVREY------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+P A+ QK + EY + ++++ P + V K + +
Sbjct: 118 AAEALPEADLQKYYDEHKAEYYRPRRVRLAAIVWNAPAGSPERAAKVALAKKALAKLKAE 177
Query: 212 LPKDCNKLEKFA-----SKIHDVSIGKAQYLLESDLHPQFQNLLK-----KSQNNTTNPY 261
K+ + + G + DL + T+
Sbjct: 178 EKKNTLAFAQLVNEFSEDAASKATAGDLGFKTREDLEKAYSKEFADVAYNLQPGATSGVL 237
Query: 262 VTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T GV + ++D +K + + K K ++KKLR +A +
Sbjct: 238 ETPNGVYLVKGTGEQDELNRTFEQVKPQIQTKLYREKKTKEFDAWLKKLRDDAKV 292
>gi|73541077|ref|YP_295597.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
gi|72118490|gb|AAZ60753.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha
JMP134]
Length = 649
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 38/138 (27%), Gaps = 5/138 (3%)
Query: 174 TVREYLIRTVLFSIPDN--KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-S 230
T + +L + P + Q K K EE R + K +
Sbjct: 269 TEEQRRASHILIAAPKDGPAAARQAAKDKAGKLLEELRKHPDTFADVARKQSQDPGSAEK 328
Query: 231 IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G ++ L F++ + ++ T G I + + L A
Sbjct: 329 GGDLGFMGHGALVKPFEDAMYALKDGQISDVVETDYGYHIIKLTGIKP-SETKPLDAVRP 387
Query: 290 AQNTPTKIEKHEAEYVKK 307
+ + +Y +
Sbjct: 388 ELEAELRKQFAAKKYAED 405
>gi|222823915|ref|YP_002575489.1| major antigenic peptide PEB-cell binding factor [Campylobacter lari
RM2100]
gi|222539137|gb|ACM64238.1| major antigenic peptide PEB-cell binding factor [Campylobacter lari
RM2100]
Length = 271
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 71/251 (28%), Gaps = 35/251 (13%)
Query: 94 GITFDSNTVNYFFVQHARNTGLS---AEDFSSFLDKQGIGDNHFKQ----YLAIQSIWPD 146
G VN FF R ++ AE + +D+ + K + + +
Sbjct: 27 GNNISDTEVNEFFAPMLRGAKITDLPAEQKKAIIDQYIVQQLVLKDAKAQKIENDPSYKE 86
Query: 147 VVKND--------FMLKYGNLEMEIPA------NKQKMKNITVREYLIRTVLFSIPDNKL 192
++ + K + A K K + + +L + K
Sbjct: 87 ELERAKEAILVNIYQKKIFDSIKNDDAKAKKFYEANKDKFTKPAQVKAKHIL--VTSEKE 144
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLK 251
+ + + + + K K G + ES + F +
Sbjct: 145 AKDIIAELSKLSGKALNDKFAQLAKE--KSIDKGSSAQGGDLGWFAESTMVKPFADAAFS 202
Query: 252 KSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIAL-----KAYLSAQNTPTKIEKHEAEYV 305
+ + P + G I K D + + KA + + + ++ +
Sbjct: 203 MKKGTISKTPVKSDFGYHIIL---KEDARAKSTMSYNEVKAGIESNIKMEEFKELMNKKA 259
Query: 306 KKLRSNAIIHY 316
++L A + Y
Sbjct: 260 QELLQKAKVEY 270
>gi|324993323|gb|EGC25243.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sanguinis SK405]
Length = 335
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 21/209 (10%)
Query: 17 TTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA 76
F + + V + T+ G IT + K NG +++
Sbjct: 3 KKIFAGAVTLLSVAVLAACSNSEGKDIVTMKGNTITVNE------FYDQVKTNGAAQQVL 56
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+Q I + + EK G V F + G F+ L + G+ ++ +K+
Sbjct: 57 LQMTIKDIFE----EKYGKDVKDKDVKEAFEKSKTAYG---TAFAQVLAQNGLTEDAYKE 109
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + VK + + E A + +T + + + +
Sbjct: 110 QIRTNMLVEYAVKKAAEKELTD-ENYKAAFENYTPEVTAQ-------IIKVASEDKGKEV 161
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + + A+ S++ + K
Sbjct: 162 LEKAKAEGADFSQIAKENSTDAATKEKGG 190
>gi|257080935|ref|ZP_05575296.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis E1Sol]
gi|256988965|gb|EEU76267.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis E1Sol]
Length = 342
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTEKSFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|188992771|ref|YP_001904781.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris
str. B100]
gi|167734531|emb|CAP52741.1| Peptidylprolyl isomerase [Xanthomonas campestris pv. campestris]
Length = 656
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 50/146 (34%), Gaps = 6/146 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
++K + + + L +L S + + +++ + D L K S+
Sbjct: 277 EEEKARFVEPDQRLASHILISAGSDAAAQKA-GEEKAAKLAAQAKQPGADFAALAKANSQ 335
Query: 226 IHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + + F++ L + P T+ G I + + + G+
Sbjct: 336 DPGSKDAGGDLGWVEKGTMVKPFEDALFAMKAGDVVGPIKTEFGYHVIQLREVKGGQGKS 395
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + Q +++ + L
Sbjct: 396 FEQ--VRDQLAAEQLKADADKAFADL 419
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ + Q N + + + +L+ E + + E +GI TV +
Sbjct: 81 QSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDATVRDYIAN 140
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 141 IPAFQIDGKFSPDQYRAALAQ-GTPPRT 167
>gi|66769563|ref|YP_244325.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. 8004]
gi|66574895|gb|AAY50305.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 656
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 50/146 (34%), Gaps = 6/146 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
++K + + + L +L S + + +++ + D L K S+
Sbjct: 277 EEEKARFVEPDQRLASHILISAGSDAAAQKA-GEEKAAKLAAQAKQPGADFAALAKANSQ 335
Query: 226 IHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + + F++ L + P T+ G I + + + G+
Sbjct: 336 DPGSKDAGGDLGWVEKGTMVKPFEDALFAMKAGDVVGPIKTEFGYHVIQLREVKGGQGKS 395
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + Q +++ + L
Sbjct: 396 FEQ--VRDQLAAEQLKADADKAFADL 419
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ + Q N + + + +L+ E + + E +GI TV +
Sbjct: 81 QSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDATVRDYIAN 140
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 141 IPAFQIDGKFSPDQYRAALAQ-GTPPRT 167
>gi|32490767|ref|NP_871021.1| hypothetical protein WGLp018 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25165973|dbj|BAC24164.1| surA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 452
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 44/141 (31%), Gaps = 10/141 (7%)
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGF--VQKRIKDAEESRLRLPKDCNKL-EKFASKIHD 228
E I+ +L +N+ +N + +++ + K E S +
Sbjct: 303 KKIETEIKIKHILLIPSENRDENNTYFYLKQIKNQISSKEISFSNAAKKYSEDLYSALQG 362
Query: 229 VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
I + + + K + T P + +G + + + + + + K Y
Sbjct: 363 GEIDYDYKKIFDNF--TLNKINKIKKGEITGPIRSLQGWHLVKLMNIKIV--DNTYKIYK 418
Query: 289 SAQ---NTPTKIEKHEAEYVK 306
K+ + +++
Sbjct: 419 ENAYKILFEKKLSEVIYNWLE 439
>gi|256854455|ref|ZP_05559819.1| rotamase [Enterococcus faecalis T8]
gi|256710015|gb|EEU25059.1| rotamase [Enterococcus faecalis T8]
gi|315030576|gb|EFT42508.1| putative foldase protein PrsA [Enterococcus faecalis TX4000]
Length = 342
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + + + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKDIQKNFDEAKEQVEAQGGKFSDALKQASLTEKTFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|295114096|emb|CBL32733.1| PPIC-type PPIASE domain. [Enterococcus sp. 7L76]
Length = 342
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTEKSFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|262341372|ref|YP_003284227.1| peptidylprolyl isomerase [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272709|gb|ACY40617.1| peptidylprolyl isomerase [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 410
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 33/291 (11%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S+ I + E+I D +I K + LI + + +
Sbjct: 25 SFEKLEGIYAIVGNEIILDSEIK--------TKNSKNCLDDLDDLLIEKLMLYHAKKDVS 76
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN-------HFKQYLAIQSIWPDV 147
I + + + FL +Q K +L I+ + +
Sbjct: 77 IQISNQELELKTQAFLSEMSKKYANQEEFLIQQFKKKEWIPKLTETIKNHLYIEKFYQKI 136
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD----NKLQNQGFVQKRIK 203
N ++ E++ K K K + + + + L IP N+++ F++K K
Sbjct: 137 TDN---VEISPKEVKYFFTKNKSKIPFLPKKMCISYLVCIPKLSQMNRMKIIDFLKKIKK 193
Query: 204 DAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260
+ + D + S + G Q + + L +F+++ L S+ + P
Sbjct: 194 E-----IHSDIDFSIQAILFSEDNYSASNGGLIQGIKINRLSKEFKHVVLSLSEKEISEP 248
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ T G I + +D L+ L + +V ++
Sbjct: 249 FETDSGFHIIKLEKNKDEVD---LRHILIKPKYTKHELRKTKSFVDSIQKR 296
>gi|301164816|emb|CBW24376.1| putative exported isomerase [Bacteroides fragilis 638R]
Length = 517
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 37/307 (12%), Positives = 81/307 (26%), Gaps = 67/307 (21%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE- 79
+L+ + A + ING+ IT + + K +G K ++
Sbjct: 4 ILVGTLTCLFGAIAGHAQQDPVLMRINGQDITRSEFER---FCHRNKPSGIAGKETLKRC 60
Query: 80 ---LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LK +K+G+ + +
Sbjct: 61 ADLFVDMKLKLSAAQKAGLD-TVSDFRTEMENY--------------------------- 92
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
+ + ++ + Q E + + +P L +
Sbjct: 93 -------YRALSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPHHL 145
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-- 254
+ + D L D+ D + L+ SQ
Sbjct: 146 REAQILMD-------------SLYHVLETHPDIDFRTLVNKYSDDKKEFWMGWLQTSQEF 192
Query: 255 ---------NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEY 304
+ P+ T KG++ I + +R++ ++ L + + E +
Sbjct: 193 EEVAFSLKDGEYSKPFFTPKGIQIIKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELW 252
Query: 305 VKKLRSN 311
V KL+S
Sbjct: 253 VNKLKST 259
>gi|227904499|ref|ZP_04022304.1| peptidylprolyl isomerase [Lactobacillus acidophilus ATCC 4796]
gi|227867754|gb|EEJ75175.1| peptidylprolyl isomerase [Lactobacillus acidophilus ATCC 4796]
Length = 306
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 36/267 (13%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 47 ITQQQYYDEMKKSQAGKSTLA-NMIINRALEQQ----YGKYVSSKKVDKQYNNYKKQYG- 100
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FK+ L + +K +K + E A K +TV
Sbjct: 101 --SQFSAVLQQNGMTASSFKENLKTNLLSEQALK---HIKKITKKQEQQAWKSYQPKVTV 155
Query: 176 REYLI------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ L+ + ++ + D K + + + A +++ + + D
Sbjct: 156 QHILVAKKSTAQDIIKQLKDGKSFSSLAKKYSLDTATKNKAGKLPSFDSTDNTL----DS 211
Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ A + L K+ T+ P +Q G I + + G K +
Sbjct: 212 AFKTAAFKL-------------KTGEVTSTPVKSQSGYHVIKMINHPAKGKFADHKKAID 258
Query: 290 AQNTPTKIEKHE--AEYVKKLRSNAII 314
+ + + + + + A +
Sbjct: 259 DEIYASMAQDQSTMKDVIATVLKRADV 285
>gi|241668619|ref|ZP_04756197.1| parvulin-like peptidyl-prolyl isomerase domain-containing protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254877153|ref|ZP_05249863.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|11228674|gb|AAG33121.1|AF247686_1 putative parvulin [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843174|gb|EET21588.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 92
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
Q++ Q+ KD E ++ +K + G + + P+F ++
Sbjct: 11 QSESECQQIKKDISEGKITFE---EAAKKHSLCPSGARGGDLGTFSQGQMVPEFDKVVFN 67
Query: 253 SQNN-TTNPYVTQKGVEYIAICDK 275
+ + P TQ G + I +
Sbjct: 68 DELHKVHGPVQTQFGYHLLEITSR 91
>gi|238795538|ref|ZP_04639053.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia mollaretii ATCC
43969]
gi|238720657|gb|EEQ12458.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia mollaretii ATCC
43969]
Length = 628
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 55/153 (35%), Gaps = 20/153 (13%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-- 58
M + + ++ + + +++ F + + SY S+ +NG+ I+ + +
Sbjct: 1 MMDNLRAAANNVVLKILLALIMLSFILTGVGSY-LIGGSNDYAAKVNGQEISRAQLEQAV 59
Query: 59 RIALLKLQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ +LQ+ GE L + + +L+ L Q +K G+T V
Sbjct: 60 QSERGRLQQQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKD 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHF 134
Q + + +++ G + F
Sbjct: 120 AIRQAPYFQTDNKFDNNKYLELVNRMGYTPDQF 152
>gi|319761234|ref|YP_004125171.1| ppic-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans BC]
gi|317115795|gb|ADU98283.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans BC]
Length = 275
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-----CNKLEKFASKIH 227
+R VLF++ Q ++ ++ LR D ++++
Sbjct: 114 GEGERLRLRHVLFAVTPGVDVKQL---RQRAESVLLDLRCADDGGVRFAEAARQWSNCPS 170
Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G+ +L ++D P+F + + K++ + ++ G+ + +C++ E
Sbjct: 171 GQQGGELGWLTQADCAPEFAREIFGKAEVGVLSRLVHSRFGLHVVEVCER-----EAGRA 225
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRS 310
+ + ++ LR
Sbjct: 226 LVFEEVQASVALLLRQQAWINALRQ 250
>gi|212715680|ref|ZP_03323808.1| hypothetical protein BIFCAT_00580 [Bifidobacterium catenulatum DSM
16992]
gi|212661047|gb|EEB21622.1| hypothetical protein BIFCAT_00580 [Bifidobacterium catenulatum DSM
16992]
Length = 453
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 23/64 (35%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ E E+ +EL + + EK I V F A+ G+ F +
Sbjct: 324 TKEQKAEAEETVEKELRDQMVLDVLAEKLDIKVSQADVFNFLASIAQQYGMDPNAFIQAI 383
Query: 125 DKQG 128
+ G
Sbjct: 384 MRNG 387
>gi|323706239|ref|ZP_08117806.1| PpiC-type peptidyl-prolyl cis-trans isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534403|gb|EGB24187.1| PpiC-type peptidyl-prolyl cis-trans isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 301
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 4/108 (3%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
+ L K S + G+ + +F++ + P TQ G
Sbjct: 187 GANFADLAKQYSIDTSTKDNGGELGEFTRGTMVKEFEDAAFALKPGEISKPVKTQYGYHI 246
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
I K + A + +S K + + + L+ A I +
Sbjct: 247 IKSEAKYTKSFDEAKSSIISYLENNKKQDIFNQK-SEALKKAAKIEKF 293
>gi|89095401|ref|ZP_01168315.1| peptidyl-prolyl cis-trans isomerase C [Oceanospirillum sp. MED92]
gi|89080339|gb|EAR59597.1| peptidyl-prolyl cis-trans isomerase C [Oceanospirillum sp. MED92]
Length = 93
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 5/85 (5%)
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
+ + + E ++ +S G + P+F +
Sbjct: 13 TEEQCNQIKAEIEAG----LDFAEAAKQHSSCPSSAQGGDLGSFGRGQMVPEFDKAVFTG 68
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRD 277
+ P TQ G + + + D
Sbjct: 69 EVGVVQGPIQTQFGFHLLEVTSRED 93
>gi|302036376|ref|YP_003796698.1| putative peptidyl-prolyl cis-trans isomerase D (fragment)
[Candidatus Nitrospira defluvii]
gi|300604440|emb|CBK40772.1| putative Peptidyl-prolyl cis-trans isomerase D (fragment)
[Candidatus Nitrospira defluvii]
Length = 232
Score = 41.6 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR-IRTTINGEVITDGDISKRI-----ALLK 64
D+ L + L+ V + + + SS + ++ +V+ D +R K
Sbjct: 11 DYPWFLKSIMGLLALAFVITMGWWGFGQSSGNVVASVGDQVV-PLDEYRRAYENTYRFYK 69
Query: 65 LQKIN----GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSA 117
+ N L++ +++LI + ++ G+T + + +N
Sbjct: 70 DKGQNDIKDEFLKQFVLEQLIDNRMWLHVAKEMGLTVSDEDLRKAIMQRTEFQKNGSFDP 129
Query: 118 EDFSSFLDKQGIGDNHFKQ 136
+ + L + F+
Sbjct: 130 DAYKRLLSANRLTPASFEA 148
>gi|307565748|ref|ZP_07628217.1| PPIC-type PPIASE domain protein [Prevotella amnii CRIS 21A-A]
gi|307345574|gb|EFN90942.1| PPIC-type PPIASE domain protein [Prevotella amnii CRIS 21A-A]
Length = 466
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 75/254 (29%), Gaps = 20/254 (7%)
Query: 40 SRIRTTINGEVITDGDIS--KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ + E I ++ K + K G+ E + +++ V+ L + +T
Sbjct: 40 DEVIWVVGDEPILRSEVEITKLQGEAEGTKWAGDPEYLIPEQIAVQKLFLHQAALDSLTI 99
Query: 98 DSNTVNYFFVQHARNTG--LSAEDF--SSFLDK-QGIGDNHFKQYLAIQSIWPDVVKN-- 150
+ + Q +S L++ Q +Q L +V+
Sbjct: 100 TESEIYQGVEQ---QINYWISLPQIGSKERLEEFQHKSLAQIRQDLHDDYKNRQLVQKMQ 156
Query: 151 -DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E+ K+ ++ + + + + + +
Sbjct: 157 EKLVSDIKVSPSEVRTYFNKIPIDSIPIVPTQVEVEILTQTPKIEVEEINRIKNQLRDYT 216
Query: 210 LRLPKD---CNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQ-NLLKKS-QNNTTNPYV 262
R+ L + S+ + G+ ++ + L P F + +
Sbjct: 217 NRINNGETTFETLARLYSEDPGSARQGGELGFIGRASLDPAFAGAAFNLTDPKKISKIVE 276
Query: 263 TQKGVEYIAICDKR 276
++ G I + DKR
Sbjct: 277 SEFGYHIIQLIDKR 290
>gi|271969773|ref|YP_003343969.1| hypothetical protein Sros_8584 [Streptosporangium roseum DSM 43021]
gi|270512948|gb|ACZ91226.1| hypothetical protein Sros_8584 [Streptosporangium roseum DSM 43021]
Length = 206
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 17/196 (8%), Positives = 53/196 (27%), Gaps = 25/196 (12%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKL-----------QKINGELEKIAVQELIVETLK 86
+ + G+ I+ ++ + + K G L ++ + +L
Sbjct: 25 TQAGAAAVVGGDRISSNELDGNVREFEAALAKANVSVADLKFPGSLPQVVLFQLATAKQY 84
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+ E G+T ++ + +Q + + + + + +
Sbjct: 85 TKVAESKGVTVTDAEIDQVIAATGGQA-----QHEQQMLQQAVAPSQSRDFTRAKLLMTK 139
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAE 206
++ KYG + + + + I + +V + Q + +
Sbjct: 140 LM-----AKYGGGSDQAALQRGQEQAIK----DLASVKITWNPRYGQINAQPSQEQPNIF 190
Query: 207 ESRLRLPKDCNKLEKF 222
R +
Sbjct: 191 LDNGRFGAGPAAAPQQ 206
>gi|148653423|ref|YP_001280516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp.
PRwf-1]
gi|148572507|gb|ABQ94566.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Psychrobacter sp.
PRwf-1]
Length = 624
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 54/384 (14%), Positives = 105/384 (27%), Gaps = 87/384 (22%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALL 63
L + + L I+ + SY S A S + + I+ + +R LL
Sbjct: 8 LQSWPGRIFLMLCLSPLVILGLESYFSGASSVNEVAKVGDQTISRAEYQDGLNGRRNELL 67
Query: 64 KLQKINGELEKIAVQE-----LIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTG 114
+ + A+ LI L + + + G+ +N +Q N
Sbjct: 68 QGGVEASAINTQALNSEVLKGLINRALLRNQTDHLGMHVSDAAINNLLLQDPQYLDENGQ 127
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQS-------------------------------- 142
S + F+ L +QGI + Q
Sbjct: 128 FSNDRFAFALQQQGITKDQLFAQYRQQLNLMQLYASVAQTAVYPESQIHDLLALQLETRD 187
Query: 143 IWP-DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+W + F K + EI + K+ ++ S+ +KL + Q
Sbjct: 188 VWVYRLPWEQFKDKVSVSDKEISDYYNENKSKLNSRAMVDLAYVSLDPSKLPVEKVTQAE 247
Query: 202 IK--------------------------DAEESRLRLPKDCNKLEKFASKIHD------- 228
++ AE + ++ + K E FA+ +
Sbjct: 248 LQAQYDDYKARFVGNSKQKVSQILVTGSKAEATMQQIEQRLKKGESFAAIAKELSEDPVS 307
Query: 229 -VSIGKAQYL----LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
G +D Q L + + P T G + + DK G +
Sbjct: 308 AAKGGDIGTFNADAFGADGQKVAQALSGLEKGEVSAPVKTSFGYQLFKVTDK--SGDSVP 365
Query: 284 LKAYLSAQNTPTKIEKHEAEYVKK 307
+ + T + + +
Sbjct: 366 SLESMRDELTAQAQRQKREQLIAD 389
>gi|330907936|gb|EGH36455.1| type 1 restriction-modification system, restriction subunit R
[Escherichia coli AA86]
Length = 1137
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|69244418|ref|ZP_00602834.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
DO]
gi|258614785|ref|ZP_05712555.1| rotamase family protein [Enterococcus faecium DO]
gi|293560739|ref|ZP_06677218.1| foldase protein PrsA [Enterococcus faecium E1162]
gi|293566174|ref|ZP_06678577.1| foldase protein PrsA [Enterococcus faecium E1071]
gi|314938540|ref|ZP_07845824.1| putative foldase protein PrsA [Enterococcus faecium TX0133a04]
gi|314940885|ref|ZP_07847791.1| putative foldase protein PrsA [Enterococcus faecium TX0133C]
gi|314948094|ref|ZP_07851496.1| putative foldase protein PrsA [Enterococcus faecium TX0082]
gi|314952022|ref|ZP_07855045.1| putative foldase protein PrsA [Enterococcus faecium TX0133A]
gi|314991903|ref|ZP_07857358.1| putative foldase protein PrsA [Enterococcus faecium TX0133B]
gi|314995161|ref|ZP_07860275.1| putative foldase protein PrsA [Enterococcus faecium TX0133a01]
gi|68196359|gb|EAN10787.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
DO]
gi|291590100|gb|EFF21892.1| foldase protein PrsA [Enterococcus faecium E1071]
gi|291605330|gb|EFF34785.1| foldase protein PrsA [Enterococcus faecium E1162]
gi|313590570|gb|EFR69415.1| putative foldase protein PrsA [Enterococcus faecium TX0133a01]
gi|313593487|gb|EFR72332.1| putative foldase protein PrsA [Enterococcus faecium TX0133B]
gi|313595812|gb|EFR74657.1| putative foldase protein PrsA [Enterococcus faecium TX0133A]
gi|313600243|gb|EFR79086.1| putative foldase protein PrsA [Enterococcus faecium TX0133C]
gi|313642097|gb|EFS06677.1| putative foldase protein PrsA [Enterococcus faecium TX0133a04]
gi|313645510|gb|EFS10090.1| putative foldase protein PrsA [Enterococcus faecium TX0082]
Length = 336
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + V ++ S + I T+ G IT D L
Sbjct: 1 MKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------ESS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 TYKEYIRNNLAF 118
>gi|293556277|ref|ZP_06674862.1| foldase protein PrsA [Enterococcus faecium E1039]
gi|291601536|gb|EFF31803.1| foldase protein PrsA [Enterococcus faecium E1039]
Length = 336
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + V ++ S + I T+ G IT D L
Sbjct: 1 MKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------ESS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 TYKEYIRNNLAF 118
>gi|261378747|ref|ZP_05983320.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria cinerea
ATCC 14685]
gi|269144903|gb|EEZ71321.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria cinerea
ATCC 14685]
Length = 512
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 8/167 (4%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V S + E I+D I+ + +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGSDYIVQVGDEKISDHSINTAMQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
K Q L+ KQ + GI+ + V H S
Sbjct: 60 QAKGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSQEQIKQIIVDDPNFHDAGGKFSHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
S +L ++ + ++ F + + Q ++V +++ G L + A +
Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLVN---LVQNGVLVSDAQAEQ 163
>gi|149375261|ref|ZP_01893032.1| peptidyl-prolyl cis-trans isomerase C2 [Marinobacter algicola
DG893]
gi|149360297|gb|EDM48750.1| peptidyl-prolyl cis-trans isomerase C2 [Marinobacter algicola
DG893]
Length = 92
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 204 DAEESRLRLPKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY 261
+ + + +D + ++ +S + G + P+F ++ + N P
Sbjct: 18 EELKLAIEGGQDFAEVAKQHSSCPSGRNGGDLGAFGPGQMVPEFDKVVFSGEVNKVLGPV 77
Query: 262 VTQKGVEYIAICDK 275
TQ G + + +
Sbjct: 78 KTQFGYHLLEVTSR 91
>gi|309704074|emb|CBJ03420.1| endonuclease R [Escherichia coli ETEC H10407]
Length = 1137
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|167628081|ref|YP_001678581.1| parvulin-like peptidyl-prolyl isomerase domain-containing protein
[Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167598082|gb|ABZ88080.1| parvulin-like peptidyl-prolyl isomerase domain protein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 92
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
Q++ ++ KD E ++ +K + G + + P+F ++
Sbjct: 11 QSESECKQIKKDISEGKITFE---EAAKKHSLCPSGARGGDLGTFSQGQMVPEFDKVVFN 67
Query: 253 SQNN-TTNPYVTQKGVEYIAICDK 275
+ + P TQ G + I +
Sbjct: 68 DELHKVHGPVQTQFGYHLLEITSR 91
>gi|307730260|ref|YP_003907484.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
gi|307584795|gb|ADN58193.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1003]
Length = 304
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 68/236 (28%), Gaps = 35/236 (14%)
Query: 115 LSAEDFSSFLDKQGIGDN-HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
++ + D + + Q I ++ + ++ ++ A ++ K+
Sbjct: 67 ITQAQLDDAVRASNAPDTPTLRASIKNQMIARELFRQAAEKQHYESRPQVVAAVEQAKSA 126
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--------------------RLRLP 213
+ +R + P + + E +L+
Sbjct: 127 AMTAAYLRDQVKPAPVTDADVKAKYDAIVATLGEFEYKPSAIAVKDADTAQTVLTQLKKG 186
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLH-----------PQFQNLLKKSQNNT-TNPY 261
D +L K S+ + G A + P + L+K Q + P
Sbjct: 187 TDFAQLAKQYSQGPGAAQGGALNWISFRTPIQPGNTQNWPQPLAEALVKLPQGGVSSAPV 246
Query: 262 VTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +KR +K L Q ++K A+ V L NA I
Sbjct: 247 QVGDAFWILRVDEKRPTQVPQYDQIKDTLRKQLEQVALQKATAQVVVDLMKNARIQ 302
>gi|158321661|ref|YP_001514168.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
oremlandii OhILAs]
gi|158141860|gb|ABW20172.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
oremlandii OhILAs]
Length = 317
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 43/329 (13%), Positives = 98/329 (29%), Gaps = 62/329 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIAL-LKLQKINGEL 72
K LT + ++ + I ++ + I + +T+ + +K + L + L
Sbjct: 3 KKLTILIIAMLTMAILITGCSKTGLAEGVVAKIGNKEVTEAEYNKLLDYYLSIATTQYNL 62
Query: 73 EKIAVQE------LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA--------- 117
+ + +++TLK E I + A ++
Sbjct: 63 TEEILNTDNGSGMTLLDTLK---AEVLDIIV----LTEIIADKAAENKVTVTEEEVTKEF 115
Query: 118 -----------EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
E++ +++ + D K+ + I N F L+ +
Sbjct: 116 EENHVKVMESDENYKKLIEENKLDDAFIKEQIRKDLIAYKY--NQFYLEKTEINEAAAKT 173
Query: 167 --KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
++ + + + +L + + G ++ D +L K S
Sbjct: 174 FYEENPEGFHNEQVSAKHILVETEETAKEVIGKLEA------------GADFAELAKEYS 221
Query: 225 KIHDV--SIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK------ 275
+ G Y + + P+F+ + P T G I + DK
Sbjct: 222 TEPGAEQTGGNLGYFKKGRMVPEFEKAAFALEVGKISEPVKTDFGYHVIVVEDKVDESIS 281
Query: 276 -RDLGGEIALKAYLSAQNTPTKIEKHEAE 303
D +I YL + +E+ +
Sbjct: 282 FEDAKADIV--DYLKRLDYQKHLEEALKK 308
>gi|90424481|ref|YP_532851.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
gi|90106495|gb|ABD88532.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas
palustris BisB18]
Length = 346
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 32/288 (11%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
S A I I IT ++ I+ L ++ A + +T++
Sbjct: 59 PSSSVAKGGEIVARIGENDITAEEVRAAISFLDARQQAALARDPAQ---LSQTVRAILAN 115
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ + E + D+Q + + Q + +
Sbjct: 116 RLALK---------------------EALAKKWDQQPVIVAQLARVRESQIVESYLQSLT 154
Query: 152 FMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
+ E EI A + R + + ++ ++ + + ++ D +
Sbjct: 155 TPPESYPNESEIKAVYDANASALMVPRRFQLAQIVVAVAKDADKAAEDAGRKKLDDVLKK 214
Query: 210 LRLP-KDCNKLEKFASKIHDVSIGK--AQYLLESDLHPQFQ-NLLKKSQNNTTNPYVTQK 265
+ P D L + S + + E DL + + ++ ++ + P
Sbjct: 215 AKAPGADFAALARSVSDDAATAERDGEIGWAAEPDLKTEIRSQIVGLAKGAISEPVRLDD 274
Query: 266 GVEYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G + + D L ++ L + + + + Y+ +L
Sbjct: 275 GWHILKLLDTEASRLRSLSEVRDALVQRIRAERADANRRAYMAELLKQ 322
>gi|170060603|ref|XP_001865875.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878989|gb|EDS42372.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1676
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 26/207 (12%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
L+KL K + L++ V +I LK++E + V+ ++
Sbjct: 411 LIKLIKSSENLQENIVNSIIS-GLKRKETAEI---ISDKIVSKEVIERGIRN-------- 458
Query: 122 SFLDKQGIGDNH--FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL 179
++ I K L +Q W V NL+ KQ V E++
Sbjct: 459 --FNRPSIKVETNMIKGKLRVQYKWQIHVNGRDKSVLKNLKRNFIKMKQFHSITKVVEHI 516
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
R +P + + + +A R C E+ S + S + +
Sbjct: 517 DRISPLRVPSASSVKRLV--QVLGEASSLR-----GCRNTEELISLLQYASNMELLKNAQ 569
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKG 266
+ + + + K+ QN + P T G
Sbjct: 570 TKYFKRIKAIFKELQN--SPP-STDSG 593
>gi|313124214|ref|YP_004034473.1| parvulin-like peptidyl-prolyl isomerase [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|312280777|gb|ADQ61496.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 311
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 89/292 (30%), Gaps = 48/292 (16%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--GEVITDGDISKRIALLKLQKINGE 71
K L VL + + + + S+ + +N G IT + + K
Sbjct: 3 KHLKKIAVLAGAAAIGLSTAACSSSSATV---VNYKGGKITQDE------YYEAMKDTSA 53
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ V +I TLK Q G S +N + ++ + + +FS+ L G+
Sbjct: 54 GQSTLVSLIIYRTLKAQ----YGDKVSSKKINAEYNKYKKQY---SSNFSTVLSYSGLTT 106
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE-------YLIRTVL 184
FKQ LA + A + +K T + Y +T +
Sbjct: 107 KSFKQNLA-------------------TNLYSVAALKDLKKPTTTQEKNWWKSYHTKTTV 147
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHP 244
I +K V K++K K + L S
Sbjct: 148 QHIVVDKKSTAETVIKKLKSGTSFATLAKKYSTDTATKKKAGKMAAFDSTDTNLSSTFKS 207
Query: 245 QFQNLLKKSQNN-TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
+ K + TT P T G E I + + G K+++ Q
Sbjct: 208 A---VWKLKEGEYTTTPVKTSSGYEVIKVLKTTEKGSYTKNKSFIDKQLYAK 256
>gi|228477887|ref|ZP_04062501.1| protease maturation protein [Streptococcus salivarius SK126]
gi|228250377|gb|EEK09617.1| protease maturation protein [Streptococcus salivarius SK126]
Length = 380
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 13/124 (10%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
++ VS + ++ G+ +T GD+ K + + ++ +
Sbjct: 77 VAVSALVGAGAMYVSLGNKTTEETTLVSMKGDTVTVGDV------FDSLKGSSQTQQSVL 130
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
TL+K ++ G V+ + Q + G + FS L G + ++
Sbjct: 131 SA----TLQKALEKEYGSKVSKEDVDKAYKQASEQYG---DQFSQVLAAYGQTEESYRTQ 183
Query: 138 LAIQ 141
+ Q
Sbjct: 184 IRTQ 187
>gi|187730438|ref|YP_001882945.1| type III restriction enzyme, res subunit [Shigella boydii CDC
3083-94]
gi|187427430|gb|ACD06704.1| type III restriction enzyme, res subunit [Shigella boydii CDC
3083-94]
Length = 1137
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|308070426|ref|YP_003872031.1| Trigger factor (TF) [Paenibacillus polymyxa E681]
gi|305859705|gb|ADM71493.1| Trigger factor (TF) [Paenibacillus polymyxa E681]
Length = 437
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + EK L++E Q + I ++ A S E+ S L+
Sbjct: 347 QMKADAEKRVRNNLVLE----QVAKAENIEVSEAEIDEELKNMAEAYKRSVEEIRSILEG 402
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
G + K+ ++++ +V+N ++ E
Sbjct: 403 NG-SFANLKEEISLRKTIALLVENSKEVEAPVEAAE 437
>gi|294618799|ref|ZP_06698326.1| foldase protein PrsA [Enterococcus faecium E1679]
gi|291594987|gb|EFF26337.1| foldase protein PrsA [Enterococcus faecium E1679]
Length = 336
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + V ++ S + I T+ G IT D L
Sbjct: 1 MKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------KSS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLEAAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 TYKEYIRNNLAF 118
>gi|238764856|ref|ZP_04625797.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia kristensenii ATCC
33638]
gi|238696963|gb|EEP89739.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia kristensenii ATCC
33638]
Length = 627
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ G + + + +LQ
Sbjct: 13 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRGQLEQAVQSERGRLQ 66
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T V Q
Sbjct: 67 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYF 126
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 127 QTDGKFDNSKYLELVNRMGYTPDQF 151
>gi|320177257|gb|EFW52264.1| Type I restriction-modification system, restriction subunit R
[Shigella dysenteriae CDC 74-1112]
Length = 1137
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|82546466|ref|YP_410413.1| type I restriction enzyme R protein [Shigella boydii Sb227]
gi|81247877|gb|ABB68585.1| putative type I restriction enzyme R protein [Shigella boydii Sb227]
gi|320185253|gb|EFW60030.1| Type I restriction-modification system, restriction subunit R
[Shigella flexneri CDC 796-83]
Length = 1137
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|332705576|ref|ZP_08425652.1| hypothetical protein LYNGBM3L_11830 [Lyngbya majuscula 3L]
gi|332355368|gb|EGJ34832.1| hypothetical protein LYNGBM3L_11830 [Lyngbya majuscula 3L]
Length = 260
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 76/215 (35%), Gaps = 19/215 (8%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDN 132
K ++++ + + + + +T + + + L A D ++L I +
Sbjct: 25 KDVSEKILYQKVINRAAVERNLTVTAEEIQEEADKFRHQNRLEKASDTLAWLADNMITSD 84
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
++ + Q + + K+ F + ++E + ++ + L+ ++ + + KL
Sbjct: 85 DWEAGIRQQLLAKKLSKSLF-----DKDVEKFFGQNRL---DFDQILLYQII--VANEKL 134
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
+ F Q K+ + D ++ + + L D+ +
Sbjct: 135 SKELFYQIEEKEISFYQAAHIYDIDEQRRQKCGFEGKLYR---WNLRPDIA---AIVFGV 188
Query: 253 SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
NP T +G + + +R + E+ + Y
Sbjct: 189 PIGQVVNPVKTPQGYHILMV--ERFIPAELTPERY 221
>gi|237719063|ref|ZP_04549544.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4]
gi|229451442|gb|EEO57233.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_2_4]
Length = 514
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 35/314 (11%), Positives = 96/314 (30%), Gaps = 73/314 (23%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG I +
Sbjct: 5 LLLGCI-SLFVVAVFAQEDPVLIRVNGREILRSEF------------------------- 38
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S S + + L E G+ F++
Sbjct: 39 -EYAYRRYAERSNARLSSKE----YAALFAQSKLKVE----AARAAGLDTTSVFRKQ--Q 87
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++V++ +++ ++ A QKM + + +P +
Sbjct: 88 EKCRTELVES-YLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQT-------IT 139
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS------ 253
R + E++R+ + + + D++ + + D ++ L+ +
Sbjct: 140 SRHLEEEKTRM------DSIYRMIQNQPDLNFNRLVEIYSDDKQSRWIECLETTSEFENV 193
Query: 254 -----QNNTTNPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEK 299
+ + P+ T +G+ + + D+ + E + + + T +E+
Sbjct: 194 AFSLAKGMASQPFFTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLER 253
Query: 300 HEAEYVKKLRSNAI 313
+ + A+
Sbjct: 254 LKKAWQYAPNQAAM 267
>gi|163755251|ref|ZP_02162371.1| possible peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1]
gi|161324671|gb|EDP96000.1| possible peptidyl-prolyl cis-trans isomerase [Kordia algicida OT-1]
Length = 660
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 93/304 (30%), Gaps = 52/304 (17%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ L + +V ++ + ++ TI GE + ++ K N ++
Sbjct: 1 MKNSIQLFLILLVSFTTF-GQSKKDKVLFTIEGEPTYVSE------FSRVYKKNLDIIDE 53
Query: 76 AVQELIVE--------TLKKQEIEKSGITFDSNTVNY--FFVQHARNTGLSAEDFSSFLD 125
Q+ I E LK +E + + + V + + ++ + + L
Sbjct: 54 KDQKEIEEYFDLFVEYKLKLKEAKNLKLDEKDSYVKELAGYRKQLSRNYMTDNNATEKLT 113
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
K+ + ++ + I + + + A + + IR +
Sbjct: 114 KE--AYDRLQKEVKASHI--------------LINVSLDAAPKDTLAAYNKIMDIRKSIL 157
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLH-P 244
+ + G + + D ++ NK G Y + P
Sbjct: 158 -----EGADFGEMAVKHSDDPSAKGNQKVAANK-------------GNLGYFSAFRMVYP 199
Query: 245 QFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ + P TQ G + + D RD GEI + L + ++ +
Sbjct: 200 FESAAFNTQKGEVSMPVRTQFGYHIVKVEDIRDNAGEITVAHILLLDKKEGENKEDPEQK 259
Query: 305 VKKL 308
+K +
Sbjct: 260 IKDI 263
>gi|171742686|ref|ZP_02918493.1| hypothetical protein BIFDEN_01800 [Bifidobacterium dentium ATCC
27678]
gi|283456243|ref|YP_003360807.1| tig Trigger factor, PPIase [Bifidobacterium dentium Bd1]
gi|306822550|ref|ZP_07455928.1| trigger factor [Bifidobacterium dentium ATCC 27679]
gi|309801475|ref|ZP_07695602.1| trigger factor [Bifidobacterium dentium JCVIHMP022]
gi|171278300|gb|EDT45961.1| hypothetical protein BIFDEN_01800 [Bifidobacterium dentium ATCC
27678]
gi|283102877|gb|ADB09983.1| tig Trigger factor, PPIase [Bifidobacterium dentium Bd1]
gi|304554095|gb|EFM42004.1| trigger factor [Bifidobacterium dentium ATCC 27679]
gi|308221990|gb|EFO78275.1| trigger factor [Bifidobacterium dentium JCVIHMP022]
Length = 456
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ E E+ +EL + + EK + V F A+ G+ F +
Sbjct: 324 TKEQKAEAEETVEKELRDQMVLDVLAEKMDVKVSQADVFNFLASIAQQYGMDPNAFIQAI 383
Query: 125 DKQG 128
+ G
Sbjct: 384 MRNG 387
>gi|239994001|ref|ZP_04714525.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Alteromonas
macleodii ATCC 27126]
Length = 528
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 52/187 (27%), Gaps = 24/187 (12%)
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
I V F+ + + + E L + + K +++ + V+ +
Sbjct: 105 IEVTDADVEAFYNNNIASFD-TDEQVK--LAYVKLSVDDLKDRVSVD---EEAVRTYYEN 158
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
G+ E + +L D+ + + + +
Sbjct: 159 NLGSYGKEEERR-------------VSHILIEAGDDADAAKAKAESLKAELDNGADFAAL 205
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAI 272
+ S + G ++ + P F Q + ++ T+ G I +
Sbjct: 206 AEADSDDTFSAENG---GDLDFITPEMMDPAFDEAAFALQNVGDVSDVVETEFGFHIIKL 262
Query: 273 CDKRDLG 279
D ++
Sbjct: 263 TDLKEAQ 269
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Query: 88 QEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
Q+ G+ + Q E F + L + G F+ YL +Q
Sbjct: 1 QQATDMGLRVSDKQIRETITQMPEFQFGGQFDNERFQAILRQNGFQVADFRDYLRVQMTQ 60
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+ + AN + + + L+
Sbjct: 61 NQLAAALTNSSFALDGEVQQANALQRQTRDAKYVLVS 97
>gi|125972872|ref|YP_001036782.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum ATCC 27405]
gi|256005741|ref|ZP_05430696.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum DSM 2360]
gi|281417071|ref|ZP_06248091.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum JW20]
gi|125713097|gb|ABN51589.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum ATCC 27405]
gi|255990314|gb|EEU00441.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum DSM 2360]
gi|281408473|gb|EFB38731.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum JW20]
gi|316940891|gb|ADU74925.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
thermocellum DSM 1313]
Length = 463
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 100/292 (34%), Gaps = 37/292 (12%)
Query: 46 INGEVITDGDI--SKRIALLKLQKINGE--------LEKIAVQELIVETLKKQEIE-KSG 94
ING ++ DI +R + K N + + + ++I L + + KSG
Sbjct: 50 INGTYVST-DIMKEERNKFFEKYKRNADVLRMNDHERNDMLLDQVIERLLLEDYVNNKSG 108
Query: 95 ITFDSNTVNYFFVQHAR-NTGLSAEDFSSFLDKQG-IGDNHFKQYLAIQSI-WPDVVKND 151
+T + V + + + G + +F+ QG + K + + + K
Sbjct: 109 VTATDSEVEDYINRFIKPRYG---DSLGTFMSSQGYTNEEEMKAGIKEYILKHKALYKAA 165
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
E E+ +K K I ++ IR + S + + K++ D +RL+
Sbjct: 166 KEKNVTLTEQELDEGYEKHK-IQNKKVDIRHIFISSQERGKEEA----KKLADEIYNRLK 220
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN------LLKKSQNNTTNPYVTQK 265
+D L K S D ++ ++ ++L F + P +
Sbjct: 221 NNEDFETLAKQYS--DDEKTKESGGVI-TELRAGFNEAVFDNAVFTAEAGQLLEPIEVAR 277
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--EKHEAEYVKKLRSNAIIH 315
G E + + + + + T K E+ ++ + N I
Sbjct: 278 GYEIVYV---DKVTDFYRTRDEYAELLTVDKFMQSDAYKEWFEEYKKNYDIE 326
>gi|332974542|gb|EGK11462.1| peptidyl-prolyl cis-trans isomerase [Kingella kingae ATCC 23330]
Length = 293
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQ 78
+F + ++ + T+NG I ++ R ++ Q EL +
Sbjct: 6 LFAAISAALLTGSVLAQTV-VTVNGTKIDSSELDARAKFVQQQSQGKVQDTPELRQYIAN 64
Query: 79 ELIVETLKKQEIEKSGITFDSN 100
E+++ET+ QE ++ + S
Sbjct: 65 EVVLETVVTQEAKRLQLDKSSE 86
>gi|307297956|ref|ZP_07577760.1| conserved hypothetical protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916042|gb|EFN46425.1| conserved hypothetical protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 339
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 97/284 (34%), Gaps = 46/284 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT----------DG-DISKRIA 61
+K +L++ V +S + I +NGE+IT + +ISKRI
Sbjct: 1 MKKFIAALILLLITAVA-LSQTETLSETGIAAEVNGEIITMDTFLSKVLPNYTEISKRIE 59
Query: 62 ---------LLKL---QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ- 108
LL QK+ E E+ +++ LI ETL Q ++ GI D + +
Sbjct: 60 EVDPLFSEMLLNTEAGQKLLEEYERNSLEALIEETLLIQYAKEVGIEADIEALREVVSKS 119
Query: 109 -----HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF---MLKYGNLE 160
S D L G + ++ + + +V+ + + + E
Sbjct: 120 IMDTLTELQIEKSDADLFYVLKGYIDGLSSYEAKVVRDLAYKEVLSSLYEAVTVNATVTE 179
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
EI YL + +++ + + + + +A +D
Sbjct: 180 EEIEQY-----------YLANSSRYAVEEERADMKVLLFDSFSEAYSVWKAASRD-ANPS 227
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVT 263
+V G L+P+ ++L K ++ + VT
Sbjct: 228 SVLDTFPEVQSGSYTREEIEALNPELVKSLFKPTEGELLSSVVT 271
>gi|258511813|ref|YP_003185247.1| trigger factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478539|gb|ACV58858.1| trigger factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 435
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 9/122 (7%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARNTGLSAEDF 120
L+K E K+ + I + ++ E++ I +++ A+ +
Sbjct: 271 LRKKLEERAKLEHERYIENEVVRKAAERATIEIPPVMIEREIDHQVGHFAQQLQMQQIPL 330
Query: 121 SSFLDKQGIGDNHFKQY---LAIQSIWPDVVKNDF--MLKYGNLEMEIPANKQKMKNITV 175
++L+ G+ + LA Q++ +V K E ++ +M T
Sbjct: 331 DAYLEFTGLTMEELRDQYRELAEQNVRTSLVLEAIADAEKVEVTEEDVEQEIARMAEQTG 390
Query: 176 RE 177
E
Sbjct: 391 LE 392
>gi|119503317|ref|ZP_01625401.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium
HTCC2080]
gi|119460963|gb|EAW42054.1| peptidyl-prolyl cis-trans isomerase D [marine gamma proteobacterium
HTCC2080]
Length = 624
Score = 41.2 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 16/132 (12%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKINGEL-- 72
F++I+ + + S +NG IT ++ ++ L+++ N +
Sbjct: 19 FLIILSFAGFGLEQVIFGSSGTSVAEVNGTEITPQELQVAIEGQKRQLMQIFGDNIDPEM 78
Query: 73 ------EKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHARNTGLSAEDFSSF 123
A++ELI TL Q ++ + S + + A+ +
Sbjct: 79 LDDDRIRPRALEELIERTLLLQAATENAMVASSRAIGEIVGSIDVFKVDGAFDADQYKVV 138
Query: 124 LDKQGIGDNHFK 135
L G F+
Sbjct: 139 LANAGYTPERFR 150
>gi|257455225|ref|ZP_05620460.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter
aerosaccus SK60]
gi|257447187|gb|EEV22195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enhydrobacter
aerosaccus SK60]
Length = 622
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 66/213 (30%), Gaps = 18/213 (8%)
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
A ++ ++ +S+ K K + + ++ + + E+ Q
Sbjct: 199 FAPQVQVTPQEIASYYQK---NQATLKSSDMVDLTYLEL-NKNALPVAAPTAQELQQQYQ 254
Query: 169 K--MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ EY + +L N Q Q + + ++ + +
Sbjct: 255 SYLKNSNNQTEYELAMILM----NGSQAQATLTSLKSKLDANQADFAALAKQYSQDEGSK 310
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLKKSQ----NNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+D G + +S + ++ + + T+P T G +
Sbjct: 311 ND--GGNIGPITQSMFPNDYDTIMTQIKTLKVGQVTSPIKTNYGYHLFKLVKINGQTPPT 368
Query: 283 --ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+L L+ Q K E + + K+ ++A+
Sbjct: 369 IESLAPVLTEQIMAQKREAAYQDLIGKINNDAV 401
>gi|254448800|ref|ZP_05062257.1| peptidyl-prolyl cis-trans isomerase D, putative [gamma
proteobacterium HTCC5015]
gi|198261641|gb|EDY85929.1| peptidyl-prolyl cis-trans isomerase D, putative [gamma
proteobacterium HTCC5015]
Length = 643
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 25/213 (11%)
Query: 68 INGELEKIA----VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
G+LE++A + I E +S I + +F H + E S
Sbjct: 172 APGQLEQMAALMHQERDIEYIAFSGEAFRSDIELSDAEIEAYFEDHREQF-MHPEKVS-- 228
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
++ I +K N + ++ E A + + E +
Sbjct: 229 VEYVAINFEDYK--------------NGLEVTEEEVQQEYQAGVDSGRYTSQEERSASHI 274
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESD 241
LF+ + ++ + + +++ D + L K S + G + +
Sbjct: 275 LFAFDSDADEDARAAVRSEAEQVLTQINEGGDFSALAKEHSDDPGSAEQGGSLGVVQKGV 334
Query: 242 LHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAI 272
+ P+F+ + ++ +Q G I +
Sbjct: 335 MVPEFEQAVFNLPEEGAVSDLVESQFGYHIIRL 367
Score = 39.6 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 20/185 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK---LQKINGEL 72
L L +F +VP++ M T++GE ++ ++R++ + Q GEL
Sbjct: 15 LVIIAALGLFMVVPMLYDYVAGMGDNSAITVDGESVSIQQYNQRLSQNRQRLTQAFGGEL 74
Query: 73 EKIAVQEL---------IVETLKKQEIEKSGITFDSNTVNYFFV---QHARNTGLSAEDF 120
+ +L I + L++Q G + Q + E +
Sbjct: 75 PESFGDQLLAKRTTDQFIQQLLQEQATLNDGYAISDEDLVRVIQEAPQFQTDGQFDPEAY 134
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLI 180
L G ++Q + V+ F P ++M + +E I
Sbjct: 135 KRQLRSIGYSPALYEQTMT-----KRFVQGQFQEGITQTAFVAPGQLEQMAALMHQERDI 189
Query: 181 RTVLF 185
+ F
Sbjct: 190 EYIAF 194
>gi|238783605|ref|ZP_04627626.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia bercovieri ATCC
43970]
gi|238715483|gb|EEQ07474.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia bercovieri ATCC
43970]
Length = 607
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 19/111 (17%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+NG+ I+ + + + +LQ+ GE L + + +L+ L
Sbjct: 21 AAKVNGQEISRAQLEQAVQSERGRLQQQLGEQFSALAANEGYMQQLRQQVLGQLVNNMLL 80
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHF 134
Q +K G+T V Q + + +++ G + F
Sbjct: 81 DQYAKKLGLTASDEQVKDAIRQAPYFQTDNKFDNNKYLELVNRMGYTPDQF 131
>gi|262383886|ref|ZP_06077022.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262294784|gb|EEY82716.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 533
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 34/111 (30%), Gaps = 4/111 (3%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ + + +L + P + A +++ D +L K S
Sbjct: 232 SRKPNPGQVHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGDAAS 291
Query: 230 S--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ G + ++ F+ + + T+ G I + DK+
Sbjct: 292 AKKGGGLPWFGVGEMVQPFEQAAFALSKPGDLSGVVETRFGYHIIKLIDKK 342
>gi|186470963|ref|YP_001862281.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
gi|184197272|gb|ACC75235.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
Length = 259
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 15/158 (9%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
++ R +LF++ +R+ +A LR E+FA
Sbjct: 90 AANPGRHAPGERVHARHILFAVTPG---VDIEALRRLAEASLVDLR-CDAVEHGERFARA 145
Query: 226 IHDVS-------IGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAI--CD 274
++S G+ + ++ P+ L T+ G + + +
Sbjct: 146 AKELSNCPTGDAGGELGWFTAAECVPELARELFGLPYVGVLPRLVATRFGFHIVDVLARE 205
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + ++A ++ +YV L + A
Sbjct: 206 RANTPPFETVRAAIAQTLRQHAFANALRQYVSLLAAQA 243
>gi|256959822|ref|ZP_05563993.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis Merz96]
gi|256950318|gb|EEU66950.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis Merz96]
Length = 342
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTEKSFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|221210892|ref|ZP_03583872.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD1]
gi|221169848|gb|EEE02315.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans CGD1]
Length = 306
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 79/284 (27%), Gaps = 57/284 (20%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NG IT I + + + K L +LI L +Q K V
Sbjct: 65 VNGVPITQAQIDEAVRVSKAPDTPA-LRTALKNQLIARELFRQAALKQHYDTKPQVV--A 121
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
V+ A+ ++ S + + VK +
Sbjct: 122 AVEQAKTLAMTQAYLSDQVKPVPVT--------------DADVKARYDA----------- 156
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + EY P N K+I +RL+ +D KL + SK
Sbjct: 157 ---IVATLGENEYK--------PSVIAVNDADTAKQI----IARLKKGEDFAKLAQQFSK 201
Query: 226 IHDVSIGKAQYLLESDLH-----------PQFQNLLKKSQNNTTN-PYVTQKGVEYIAIC 273
+ G A + P + L+K Q T P +
Sbjct: 202 GPAAAQGGALNWISFKTPIEAGHTQNWPQPLAEALVKLPQGGLTREPVQVGDAYWIVRAD 261
Query: 274 DKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
DKR K L Q +EK A+ V L A I
Sbjct: 262 DKRPTQVPTFDQAKDTLRQQLEQVAMEKATAQVVADLIRGARIQ 305
>gi|172037585|ref|YP_001804086.1| hypothetical protein cce_2672 [Cyanothece sp. ATCC 51142]
gi|171699039|gb|ACB52020.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142]
Length = 236
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 35/229 (15%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF---LDKQGIGDNHFKQYLA 139
+ + Q EK +T + + ++ T S E + LD+Q I + ++ +
Sbjct: 26 QRIINQAAEKMNLTVTAEEIQ--IEADSQRTQRSLEKAADTYAWLDEQMINSDDWEAGIY 83
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ + + F + + + + L+ ++ +P KL + F Q
Sbjct: 84 NSILRQKLAEALFSQEVEKYFAQ--------NKVDFEQVLLYQII--VPYEKLAWEIFYQ 133
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTT 258
++ + D ++ ++ G L +L P F N+
Sbjct: 134 IEEEEMSFYQAAHIYDIDEQRRY-------HCGHEGKLYRFNLKPDFSANIFAAQPKKVI 186
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
P T +G + + + ++ A+ TP E+ ++
Sbjct: 187 TPLKTDQGYHILMV------------EEFIEAELTPILYEEIMDRMFQE 223
>gi|254372658|ref|ZP_04988147.1| hypothetical protein FTCG_00222 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374119|ref|ZP_04989601.1| peptidylprolyl isomerase [Francisella novicida GA99-3548]
gi|151570385|gb|EDN36039.1| hypothetical protein FTCG_00222 [Francisella novicida GA99-3549]
gi|151571839|gb|EDN37493.1| peptidylprolyl isomerase [Francisella novicida GA99-3548]
Length = 92
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251
Q++ Q+ KD E ++ K + G + + P+F + +
Sbjct: 11 QSESECQQIKKDITEGKITFE---EAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFN 67
Query: 252 KSQNNTTNPYVTQKGVEYIAICDK 275
N P TQ G + I +
Sbjct: 68 DELNKVHGPVQTQFGYHLLEITSR 91
>gi|257418300|ref|ZP_05595294.1| ppiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T11]
gi|257160128|gb|EEU90088.1| ppiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus
faecalis T11]
Length = 342
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ +L + + S + + S+ T+ G IT D +I +
Sbjct: 1 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIK-------EQSTSQQ 53
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +++ K E EK G + F + FS L + G+ + FK
Sbjct: 54 AFSQMV--IYKVFE-EKYGDKVTDKAIQKKFDDAKKQVEAQGGKFSDALTQAGLTEKSFK 110
Query: 136 QYLA 139
+ L
Sbjct: 111 KQLK 114
>gi|293608199|ref|ZP_06690502.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828772|gb|EFF87134.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 621
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +LI+F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
L + G+ ++ A+ L+ L Q+ EK GI+ + Q
Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDAQIEQMLAQ 118
>gi|322419880|ref|YP_004199103.1| hypothetical protein GM18_2369 [Geobacter sp. M18]
gi|320126267|gb|ADW13827.1| hypothetical protein GM18_2369 [Geobacter sp. M18]
Length = 525
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 17/146 (11%)
Query: 43 RTTINGEVITDGDISK---RIALLKLQ----------KINGELEKIAVQELIVETLKKQE 89
T+NG I+ + K R L Q + ++K+ + L+ L E
Sbjct: 47 AATVNGTKISLDEFQKSYYRTRGLYEQIYGRSLTPEMEKQMGIKKLTINSLVDNVLIHAE 106
Query: 90 IEKSGITFDSNTVNYFFVQHARNTGLSAEDFS---SFLDKQGIGDNHFKQYLAIQSIWPD 146
+K G+ V + A DF L I F++ + +
Sbjct: 107 AKKMGLKASKEEVAAEIAKIPAFQKNGAFDFGIYQQTLKANRITPKDFEESQEQEMLLQK 166
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKN 172
+N + E+ A +K K+
Sbjct: 167 A-RNKVKDAAAVTDAEVKAAFKKQKD 191
>gi|113867510|ref|YP_725999.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16]
gi|113526286|emb|CAJ92631.1| Peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16]
Length = 644
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 39/395 (9%), Positives = 98/395 (24%), Gaps = 106/395 (26%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS-----KRIALLKLQKINGELEK----- 74
F + SY + SS ++G I+ +I + ++ + + +
Sbjct: 24 FVFFGVESYSRFMDSSHDAAKVDGRAISVQEIDNVVRDQSERARQVLGASYDPRQFEGPD 83
Query: 75 ---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR--------NTGLSAEDFSSF 123
+ +LI++ + + + +T + + + + +
Sbjct: 84 ARKAVLDQLILQRVMASAVAREHLTVSDAKLLEEISNLPAIAQLPRTKDGKVDDKAYLQL 143
Query: 124 LDKQGIGDNHFKQYLAIQSIWPDV----VKNDFMLK--------YGNLEMEIPANKQKMK 171
L QG+ F + + + F+ K + + ++ A K
Sbjct: 144 LQSQGMTPEQFDARMRFELATQQLGASVAATAFVPKSLLDRLIAVRDQQRDVQALLFKPA 203
Query: 172 NITVRE----------YLIRTVLFSIPDNK------------------------------ 191
T + Y FS+P+
Sbjct: 204 GYTAKVQPDAAALKAYYDSHQQAFSVPEQAKVEYLLLSGEALAATQAVTPEELKSYYDSN 263
Query: 192 ------------------LQNQGFVQKRIKDAEESRL------RLPKDCNKLEKFASKIH 227
+R +++ + P + + S+
Sbjct: 264 IARFRIDEQRRASHILISAPKDAPAAQRQAAKDKATKLLEDLRKHPDTFADVARKNSQDP 323
Query: 228 DVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDL------ 278
+ G ++ L F++ + ++ T G I + +
Sbjct: 324 GSAEKGGDLGFMGRGALVKPFEDAMYALKDGQVSDVVETDYGYHIIKLTGIKPAETKPLE 383
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
L+A L Q K + + + A
Sbjct: 384 AVRTELEAELRKQFADKKFAEQADAFGNTVYEQAD 418
>gi|74317691|ref|YP_315431.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus
denitrificans ATCC 25259]
gi|74057186|gb|AAZ97626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiobacillus
denitrificans ATCC 25259]
Length = 647
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 16/145 (11%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI---------- 60
++ + + + F + I SY S S + + IT ++++ I
Sbjct: 25 GWLAKVILGLIAVTFALFGIDSYMSGDRSGGVVAEVGKVGITREELTREIQAQSDRLRES 84
Query: 61 ---ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG 114
A K + LI E EK + V Q ++
Sbjct: 85 LGPAFDPSMTETAAFRKQVLDSLIERKALLLEAEKLKFLAPDSYVAAAIGQIPAFQQDGK 144
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLA 139
S + + + L + G F+ L
Sbjct: 145 FSPQRYEAILRQNGRTPASFENELR 169
>gi|312965801|ref|ZP_07780027.1| type III restriction enzyme, res subunit [Escherichia coli 2362-75]
gi|312289044|gb|EFR16938.1| type III restriction enzyme, res subunit [Escherichia coli 2362-75]
Length = 1137
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS++V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDSVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|330823101|ref|YP_004386404.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans K601]
gi|329308473|gb|AEB82888.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Alicycliphilus
denitrificans K601]
Length = 275
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-----CNKLEKFASKIH 227
+R VLF++ Q ++ ++ LR D ++++
Sbjct: 114 GEGERLRLRHVLFAVTPGVDVKQL---RQRAESVLLDLRCDDDGGVRFAEAARQWSNCPS 170
Query: 228 DVSIGKAQYLLESDLHPQF-QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G+ +L ++D P+F + + K++ + ++ G+ + +C++ E
Sbjct: 171 GQQGGELGWLTQADCAPEFAREIFGKAEVGVLSRLVHSRFGLHVVEVCER-----EAGRA 225
Query: 286 AYLSAQNTPTKIEKHEAEYVKKLRS 310
+ + ++ LR
Sbjct: 226 LAFEEVQASVALLLRQQAWINALRQ 250
>gi|89885882|ref|YP_516080.1| hypothetical protein Rfer_4396 [Rhodoferax ferrireducens T118]
gi|89347880|gb|ABD72082.1| hypothetical protein Rfer_4396 [Rhodoferax ferrireducens T118]
Length = 274
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 85/277 (30%), Gaps = 56/277 (20%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
+ + +NGE + + +++ LQ + +AV I + L Q +
Sbjct: 50 TNLVALVNGEPVYEIELAS-----MLQNMP---HAVAVDSYINKVLSAQAAK-------- 93
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
++ A ++ + S L IG+ K G
Sbjct: 94 --TESAGLEVAARRLMAEREVLSNLYFSRIGEREVK---------------------GVS 130
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ EI Q+ + ++ ++ F+ +DA + L+L + +
Sbjct: 131 DAEIDQFYQRNLSDSMF-------------ARIGASYFLSATDEDATQFALKLREGDKEA 177
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDL 278
+ + +D L++ + + T+ G + + +
Sbjct: 178 AAKLKPFLNPAGKAIA-FAPADFPYDMGKLIQTMKVGEVSGSLATRNG--FFVVRVDEVV 234
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G+ + Q + + E +++LR A I
Sbjct: 235 PGKRPAIKEIKEQLRSALVNQRVGEKLQQLRKGAKIE 271
>gi|331669723|ref|ZP_08370569.1| type I restriction-modification system, R subunit [Escherichia coli
TA271]
gi|331063391|gb|EGI35304.1| type I restriction-modification system, R subunit [Escherichia coli
TA271]
Length = 1137
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS++V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDSVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|238751010|ref|ZP_04612506.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia rohdei ATCC 43380]
gi|238710700|gb|EEQ02922.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia rohdei ATCC 43380]
Length = 628
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 45/145 (31%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALL 63
L + L+ F+L I +A +NG+ I+ + + R +
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERSRMQ 67
Query: 64 KLQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ ++ + + +L+ L Q +K G+T V Q
Sbjct: 68 QQLGEQFSALAANEGYMQQMRQQVLGQLVNNMLLDQYAKKLGLTASDAQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTEGKFDNSKYLALVNQMGYTPDQF 152
>gi|311744939|ref|ZP_07718724.1| putative peptidyl-prolyl cis-trans isomerase [Algoriphagus sp. PR1]
gi|126577446|gb|EAZ81666.1| putative peptidyl-prolyl cis-trans isomerase [Algoriphagus sp. PR1]
Length = 702
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
+LFS + V+ + ++ ++ + G Y +
Sbjct: 350 ASHILFSTEGMDDAAKANVRAQAEEVLADLKGGGNFALAASQYGQDGTSQNGGDLGYFKK 409
Query: 240 SDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICD 274
+D F + KS+ N T+ G + +
Sbjct: 410 ADFVEPFAEAVFAAKSEGLINNLVETEYGFHIVEVTG 446
>gi|300728336|ref|ZP_07061701.1| ppic-type ppiase domain protein [Prevotella bryantii B14]
gi|299774401|gb|EFI71028.1| ppic-type ppiase domain protein [Prevotella bryantii B14]
Length = 476
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLL 238
+L + N + K D+ + L+ + +L K S ++ G +++
Sbjct: 131 SHILLLLKQNAPAKAAEIVKNRIDSIYNALKKGANFQELAKKYSDDKGSAVQGGLLPWIV 190
Query: 239 ESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDK 275
+ + +F+++ + + P+ + G I + DK
Sbjct: 191 KGQTYKEFEDVAYSMKKGEMSKPFSSPAGYHIILMTDK 228
>gi|86143854|ref|ZP_01062222.1| peptidyl-prolyl cis-trans isomerase [Leeuwenhoekiella blandensis
MED217]
gi|85829561|gb|EAQ48024.1| peptidyl-prolyl cis-trans isomerase [Leeuwenhoekiella blandensis
MED217]
Length = 707
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 72/268 (26%), Gaps = 20/268 (7%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
ITD +R L E + + + ET K Q + F A
Sbjct: 450 ITDQKNVQRAIKLATVTKAVEPSQETINNVFNETTKFQMA------VTEDK--NGFDDIA 501
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+ G + ++ N + L Q ++++ F + ++E +
Sbjct: 502 KEGGYNVRPVNNI--------NALDETLPGQGSQREIIRWAFDEERKTGDVERFNVEGGY 553
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD---AEESRLRLPKDCNKLEKFASKIH 227
+ V + + +L + + ++ + S L +
Sbjct: 554 LVVQVTKKTEKGLLPADEASPRVTPVLRNQKKAEQIKKNISGSDLSAIASANNTTVQTSP 613
Query: 228 DVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
V++ + + P +GV + + E+ A
Sbjct: 614 GVNLKNPTLAGSGTEPKVVGKAFGLEEGEVSEPIEGNRGVYVVKVTKITPAR-ELDNYAS 672
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ Q ++ L+ A I
Sbjct: 673 FAVQKQNADRATVNMRIIQALKDAAEIE 700
>gi|262171087|ref|ZP_06038765.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio mimicus MB-451]
gi|261892163|gb|EEY38149.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio mimicus MB-451]
Length = 619
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 68/276 (24%), Gaps = 72/276 (26%)
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGI 129
K + ++ + L +Q G+ V Q E + + L + G
Sbjct: 88 RKSVLDRMVNDLLLEQHAASLGLRVSDGQVRQMILEMPQFQSQGKFDQELYQAALRRAGF 147
Query: 130 GDNHF-----KQYLAIQS----------------IWPDVVKNDFMLKYGNLEMEIPANKQ 168
+ F K + Q + +V ++ L + A K
Sbjct: 148 TPDMFAEYLRKDLVRNQLMTALQGSEFSLPGEVNLQDQLVSQTRDIRTITLSLAEFAKKV 207
Query: 169 KMKNITVREY-------LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL--------- 212
+ + + +Y R + +L + D E ++
Sbjct: 208 TLSDEDIEQYYKANTERFTRPEQVKVSYVELSADALKAEIAIDDEAAQQYYQEHLDKYSS 267
Query: 213 ------------PKDCNKLEKFASKIHDVS------------------IGKAQYLLESDL 242
D K + +++ + G ++ +
Sbjct: 268 AEQRKVSHILIEGDDEQKAQAILDELNAGADFTTVAKEKSQDVGSAQDGGSLGWIERDTM 327
Query: 243 HPQFQNLLK--KSQNNTTNPYVTQKGVEYIAICDKR 276
P F+ + + + G I + D +
Sbjct: 328 DPAFEAAAYALTEKGQISGLVKSDFGYHIIRLDDVK 363
>gi|332087050|gb|EGI92184.1| type III restriction enzyme, res subunit [Shigella boydii 3594-74]
Length = 789
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ A L + L+
Sbjct: 641 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPQATASL-DKLLRT 699
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 700 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 744
>gi|160882390|ref|ZP_02063393.1| hypothetical protein BACOVA_00339 [Bacteroides ovatus ATCC 8483]
gi|156112203|gb|EDO13948.1| hypothetical protein BACOVA_00339 [Bacteroides ovatus ATCC 8483]
Length = 516
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 35/314 (11%), Positives = 96/314 (30%), Gaps = 73/314 (23%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG I +
Sbjct: 7 LLLGCI-SLFVVAVFAQEDPVLMRVNGREILRSEF------------------------- 40
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S S + + L E G+ F++
Sbjct: 41 -EYAYRRYAERSNARLSSKE----YAALFAQSKLKVE----AARAAGLDTTSVFRKQ--Q 89
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++V++ +++ ++ A QKM + + +P +
Sbjct: 90 EKCRTELVES-YLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQT-------IT 141
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS------ 253
R + E++R+ + + + D++ + + D ++ L+ +
Sbjct: 142 SRHLEEEKTRM------DSIYRMIQNQPDLNFNRLVEIYSDDKQSRWIECLETTSEFENV 195
Query: 254 -----QNNTTNPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEK 299
+ + P+ T +G+ + + D+ + E + + + T +E+
Sbjct: 196 AFSLAKGMASQPFFTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLER 255
Query: 300 HEAEYVKKLRSNAI 313
+ + A+
Sbjct: 256 LKKAWQYAPNQAAM 269
>gi|316979752|gb|EFV62496.1| hypothetical protein Tsp_07140 [Trichinella spiralis]
Length = 530
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 19/230 (8%)
Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
G D +R L + A + E LKK+ + G+ + F
Sbjct: 73 GVPTMDYGAVERYLLTDPVRRELYPPGQATDDSFEE-LKKRLLNAYGLKRSPAMLTDRFH 131
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ G S + F+ + + G D+V F + E+
Sbjct: 132 TLQQREGQSIQQFAQEVAELGR---------RAGVSERDIVT-RFSGGVTSREVYRAIRL 181
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-- 225
Q++ +T L ++ D + + Q + E ++ ++ A K
Sbjct: 182 QELPTLTEARKLATRIIQVKDDYQEKQQPQAGVARTEKTEMAQKIDAMIREMGNLAKKVE 241
Query: 226 -IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
+ + ++ + + + T + + G Y+ + D
Sbjct: 242 QLERAAPRPPGLHPDASVVAAW-----TTSGETAPSFGPEPGQRYVKLID 286
>gi|148270134|ref|YP_001244594.1| hypothetical protein Tpet_1000 [Thermotoga petrophila RKU-1]
gi|281412524|ref|YP_003346603.1| hypothetical protein Tnap_1102 [Thermotoga naphthophila RKU-10]
gi|147735678|gb|ABQ47018.1| hypothetical protein Tpet_1000 [Thermotoga petrophila RKU-1]
gi|281373627|gb|ADA67189.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10]
Length = 581
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 86/280 (30%), Gaps = 31/280 (11%)
Query: 46 ING---EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+N +++ I I+L L + L+ + + + + EK+ I +
Sbjct: 70 VNDYYSNLLSSYQI---ISLDPLFEEP-RLKALIADVFLQQKVVLYYAEKNDIKPSKKEI 125
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGI----GDNHFKQYLAIQSIWPDVVKNDFMLKYG- 157
N + + G N+ + + +Q V K G
Sbjct: 126 NQEVNNVIQTIKNDQNQLNRIERTYGSLSNYEKNYLEPQIRVQLTIKKV-----QEKVGV 180
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E EI ++ K ++Y + D+ QGF+ K S + + +
Sbjct: 181 VTEDEIKKYFEENKEDLQKQYDRVDIEAVSFDSSSTAQGFIAK------ASEVGFDEAAS 234
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + G + ++ + + P+ +
Sbjct: 235 SMNVTVQPFSNATRG----IFPDEIDTAL---FSATPGSIVGPFFFLDQWYVFRVKTSSV 287
Query: 278 LGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAIIHY 316
L A + + + TK+E+ + +++++ + Y
Sbjct: 288 LTDFNAFENSDAYSDVKTKLEQEKFQKWLEEFMKEENLSY 327
>gi|329923364|ref|ZP_08278848.1| conserved domain protein [Paenibacillus sp. HGF5]
gi|328941456|gb|EGG37748.1| conserved domain protein [Paenibacillus sp. HGF5]
Length = 363
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 41/335 (12%), Positives = 111/335 (33%), Gaps = 49/335 (14%)
Query: 15 LLTTYFVLIIFCIVPIV--SYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQK 67
+ +F+LI+ I+ I ++ T++G I + + R ++K
Sbjct: 15 FIAGFFILIVVTILLIAKPAFTQTHHEDAYIATVDGVEIHVSEFQRAIDANRAGIIKYFH 74
Query: 68 INGEL---------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
+ +K A+++ I + +++ ++ G+ + +
Sbjct: 75 EKYDAAPSAAFWTTPYGGNEIPLELIKKKALEDSINQKIRQILAKEQGVLP-----DISY 129
Query: 107 VQHARNTGLSAEDFSSFLDKQGI-------GDNHFKQYLAIQSIW---PDVVKNDFMLKY 156
+N L + + + + + +Y+ ++ ++++D+
Sbjct: 130 AGFMQNFNLENQRRQQAIKNHQVIFGPAQYTEEAYYEYVLANTVLSVKNHLMEHDWKPSE 189
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK-- 214
L ANK+++ + + + L + N+ + + + E +R ++
Sbjct: 190 QQLITFYEANKRRLYHAPATVKVRQLSLSFLDANRNVDTLLKTQEKRKIETAREKISSGV 249
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
+ K + V+ + + P Q + + G Y+ +
Sbjct: 250 SFEQAVKDIKQDDRVTEQVYNLDSYRHNVRSPVAQASADLLPGEVSEIIE-ENGSFYLML 308
Query: 273 CDKRDLGGEIALKAY-LSAQNTPTKIEKHEAEYVK 306
C ++D G L + Q I+ EYV+
Sbjct: 309 CMEKDQLGSKYLGFDGIREQVLKDYIDNQYEEYVR 343
>gi|322508302|gb|ADX03756.1| ppiD [Acinetobacter baumannii 1656-2]
Length = 601
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 225 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 284
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 285 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 338
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 28/134 (20%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQKINGE------- 71
+ +V I Y + + + T+NG+ I+ D+ +R L + G+
Sbjct: 1 MTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQRYKEQYLAAVKGDESLLNLP 60
Query: 72 -LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-----------------FVQHARNT 113
++ A+ L+ L Q+ EK GI+ + + + + R+
Sbjct: 61 VIQAKALDILVSRNLLIQQAEKLGISLSNAQIEQMLAQQPSLQENGQFSQKLYENYLRSI 120
Query: 114 GLSAEDFSSFLDKQ 127
G+++E + L +
Sbjct: 121 GMTSEGLIASLRQD 134
>gi|265767845|ref|ZP_06095377.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16]
gi|263252517|gb|EEZ24045.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 2_1_16]
Length = 517
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 85/307 (27%), Gaps = 67/307 (21%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE- 79
+L+ + A + ING+ IT + + K +G K ++
Sbjct: 4 ILVGTLTCLFGAIAGHAQQDPVLMRINGQDITRSEFER---FCHRNKPSGIAGKETLKRC 60
Query: 80 ---LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LK +K+G+ + DF + ++
Sbjct: 61 ADLFVDMKLKLSAAQKAGLD-------------------TVSDFRTEME----------N 91
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
Y + ++ + Q E + + +P L +
Sbjct: 92 YHRA------LSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPHHL 145
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-- 254
+ + D L D+ D + L+ SQ
Sbjct: 146 REAQILMD-------------SLYHVLETHPDIDFRTLVNKYSDDKKEFWMGWLQTSQEF 192
Query: 255 ---------NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEY 304
+ P+ T KG++ I + +R++ ++ L + + E +
Sbjct: 193 EEVAFSLKDGEYSKPFFTPKGIQIIKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELW 252
Query: 305 VKKLRSN 311
V KL+S
Sbjct: 253 VNKLKST 259
>gi|89891030|ref|ZP_01202538.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium BBFL7]
gi|89516674|gb|EAS19333.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium BBFL7]
Length = 658
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 90/309 (29%), Gaps = 65/309 (21%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQKINGEL 72
+ T F I+ + ++ + + + TI+G D R+ L L + +
Sbjct: 2 IFTKRFFTILLLFISSIAV-AQELEDKTLLTIDGN---SYDAGTFMRVYLKNLDIVQDDS 57
Query: 73 EKIAVQEL---IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
+K L I LK + + G+ + + N S ++L +
Sbjct: 58 QKDIENYLDLYIDYRLKLMQAYELGL-----DNKESYKKELNNYRQSLAQ--AYLTDTEV 110
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
+ +V+ + K E +L +
Sbjct: 111 TE--------------SLVREAYDRKKR-------------------EVNASHILVKVGP 137
Query: 190 NKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS-KIHDVSIGKAQYLLESDLHPQFQN 248
+ ++ ++ L D ++L + S + GK + + F+N
Sbjct: 138 GDTPHDTLKAWNKINSIKNELDNGADFSQLARTKSEGPSAGNEGKLGWFSVFRMVYPFEN 197
Query: 249 LLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIA--------------LKAYLSAQNT 293
+ ++ + T G + + + R GE+ A Q+
Sbjct: 198 AAFNTPVGKHSDIFRTDFGYHIVKVFEDRPARGEVTVSHIMTFDARDASEKTAAKRIQDV 257
Query: 294 PTKIEKHEA 302
++++
Sbjct: 258 YKQLQESGK 266
>gi|189461626|ref|ZP_03010411.1| hypothetical protein BACCOP_02285 [Bacteroides coprocola DSM 17136]
gi|189431656|gb|EDV00641.1| hypothetical protein BACCOP_02285 [Bacteroides coprocola DSM 17136]
Length = 453
Score = 40.8 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 67/181 (37%), Gaps = 18/181 (9%)
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+VN F L A D + G F+QY + + +++KN + K
Sbjct: 57 ESVNEAFDDFLFR-KLKAADM----RQSGCDTLPAFRQY--CKVMRGELLKNVLLDKEQE 109
Query: 159 LEMEIPANKQKMKNITVRE-YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ +Q ++ ++ I + + + + + D+ ++L+ D
Sbjct: 110 ERICRDLYRQTVERLSKSGWVKIEQITILLSQHAPKADERAARNRMDSIYAKLKSGADFT 169
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKR 276
F+ + + ++ +L +F + L S+N + P+ + GV I + D +
Sbjct: 170 S---FSCQPEGGT-----WIPVVELLQEFADRLASLSKNEFSEPFFSPLGVHIIRLTDTK 221
Query: 277 D 277
Sbjct: 222 P 222
>gi|319947343|ref|ZP_08021576.1| peptidyl-prolyl cis-trans isomerase [Streptococcus australis ATCC
700641]
gi|319746585|gb|EFV98845.1| peptidyl-prolyl cis-trans isomerase [Streptococcus australis ATCC
700641]
Length = 313
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 23/212 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAM--SSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
+ FV ++ +V+ + A S + T+ G+ IT GD I
Sbjct: 1 MKKKFVAGAVTLLSVVTLAACAKGGSDKDIVTMKGDTITVGDFYDEIK----------NN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ A Q L T+ K ++ G V + + G E F+S+L +QG+ +
Sbjct: 51 QGAQQYLFQMTINKVFEKEYGSKVSDKDVEKKVDEQKKQLG---EAFNSYLTQQGLTEET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
KQ + + ++ + + +K E + + +
Sbjct: 108 NKQQIRSNLL------LEYAVDQAISKELTDEAYKKAFETYTPEITANVI--KLDSEEKA 159
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
N+ + + A+ +++ + K
Sbjct: 160 NEVLASVKAEGADFAQIAKENSTDASTKEKGG 191
>gi|318042905|ref|ZP_07974861.1| hypothetical protein SCB01_14429 [Synechococcus sp. CB0101]
Length = 248
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 66/219 (30%), Gaps = 20/219 (9%)
Query: 97 FDSNTVNYFFVQHARNTGLS-AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
F Q +G L QGI H++ + + + +F+ K
Sbjct: 39 LSQEETEQAFAQQLERSGHDDLAALEQHLRDQGINPEHWRWQVLLPLRVRAHYRREFLSK 98
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+E + + L + D L + +++ +A +
Sbjct: 99 AEARFLERKERLDR----------VVYSLLRVQDGGLARELYLRISGGEANFA------- 141
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICD 274
+ ++A + G + + HP L+ + P+ Q+ +
Sbjct: 142 -DLAHRYAEGPERNTKGIVGPVPLNQAHPALAERLRTSTPGTLLAPFQIQEWWLVARLES 200
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ ++ ++A+ +++ +K+L +
Sbjct: 201 YTPARFDDSVAEQMAAELFEEWVQQETVGILKRLNQASD 239
>gi|58337850|ref|YP_194435.1| peptidylprolyl isomerase [Lactobacillus acidophilus NCFM]
gi|58255167|gb|AAV43404.1| PrtM precursor [Lactobacillus acidophilus NCFM]
Length = 300
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 36/267 (13%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 41 ITQQQYYDEMKKSQAGKSTLA-NMIINRALEQQ----YGKYVSSKKVDKQYNNYKKQYG- 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FK+ L + +K +K + E A K +TV
Sbjct: 95 --SQFSAVLQQNGMTASSFKENLKTNLLSEQALK---HIKKITKKQEQQAWKSYQPKVTV 149
Query: 176 REYLI------RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ L+ + ++ + D K + + + A +++ + + D
Sbjct: 150 QHILVAKKSTAQDIIKQLKDGKSFSSLAKKYSLDTATKNKAGKLPSFDSTDNTL----DS 205
Query: 230 SIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
+ A + L K+ T+ P +Q G I + + G K +
Sbjct: 206 AFKTAAFKL-------------KTGEVTSTPVKSQSGYHVIKMINHPAKGKFADHKKAID 252
Query: 290 AQNTPTKIEKHE--AEYVKKLRSNAII 314
+ + + + + + A +
Sbjct: 253 DEIYASMAQDQSTMKDVIATVLKRADV 279
>gi|149175489|ref|ZP_01854110.1| hypothetical protein PM8797T_18534 [Planctomyces maris DSM 8797]
gi|148845757|gb|EDL60099.1| hypothetical protein PM8797T_18534 [Planctomyces maris DSM 8797]
Length = 856
Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG--- 130
+ ++I+E L ++E EK + + V+ + ++ N LS + F + G
Sbjct: 179 REMEDDIILEYLFRKEAEKMNLIVSDDAVSNYISRY-TNNKLSRKAFQETCQQLGKTEGQ 237
Query: 131 -DNHFKQYLAIQSIWPDV 147
+ F+ L + + +
Sbjct: 238 IYDIFRDQLQARLAFQML 255
>gi|289207782|ref|YP_003459848.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp.
K90mix]
gi|288943413|gb|ADC71112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thioalkalivibrio sp.
K90mix]
Length = 633
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 94/357 (26%), Gaps = 101/357 (28%)
Query: 42 IRTTINGEVITDGDI-----SKRIALLKLQKIN--------GELEKIAVQELIVETLKKQ 88
+ +NG I D+ ++R + ++ + A++ LI + L +Q
Sbjct: 41 VAAEVNGTDIQVRDVHNEARAQRDQMARMFGGQIPDDLLDEEGIRMQALETLIRQELLRQ 100
Query: 89 EIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHF-----KQYLAI 140
+ +G +++ S E ++ L+ Q + + F + +
Sbjct: 101 AADSAGFKAAGDSILREIRGMPVFQEGGQFSRERYAQLLNAQRLSPSDFERDIGRSIILS 160
Query: 141 QS----------------------------IWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
Q W +DF + I A + ++
Sbjct: 161 QLQGGIQATGFPADALVDDFSRLRNQTRVASWRIFPVDDFDQPDVVDDKAIEAYYEANQD 220
Query: 173 ITVREYLIRTVLF----------------------SIPDNKLQNQGFVQKRI-------- 202
E +R + ++ + + R
Sbjct: 221 DFTTEERVRIAYLQLDPEALEDAVDVSEDDVRQHYEVNRSRYEEPELREVRQIRIQDTGE 280
Query: 203 ---KDAEESRLRL--PKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNLL-KKSQ 254
E R RL +D +L + S + G + DL + ++ +
Sbjct: 281 EGEAKINELRDRLDDGEDFAELAEAYSEDSLSADRGGSLGEIARGDLDRTLETIIFTLPE 340
Query: 255 NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ P T +G + + + P E E + LR
Sbjct: 341 GLISRPVRTDRGWFILEVTSI--------------QEARPQPFEDVRDEVERDLRDR 383
>gi|229488813|ref|ZP_04382679.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|229324317|gb|EEN90072.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length = 235
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 12/195 (6%)
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
+N A GL A + G+G + A + ++++ F + +E
Sbjct: 34 LNSAREVFAAQ-GLDA-TLADVAKHAGVGVGTVYRRFASK---DELIQALFDTRCSEIET 88
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
++ Y + + + DN+ + R +R R +
Sbjct: 89 IAATAREMPDAWEGLVYFLDVISLRMADNRGFGDLLMDGRFTSDTFARARAGIARHTAVL 148
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQK--GVEYIAICDKRD 277
++ E + P ++K +Q P ++ G +C R
Sbjct: 149 VNRAKEQGTLRSD---FEVNDIPLLMQVVKMAQKFGGDEAPQAYRRALGFMIDGLCASRT 205
Query: 278 LGGEIALKAYLSAQN 292
E+ + A S Q
Sbjct: 206 GHRELPVPALSSEQL 220
>gi|222149929|ref|YP_002550886.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium vitis S4]
gi|221736911|gb|ACM37874.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium vitis S4]
Length = 291
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 70/240 (29%), Gaps = 36/240 (15%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTG----LSAEDFSSFLDKQGIGDN-----HFKQYLA 139
EI +S + ++ F Q + LS L IG+ +KQ +A
Sbjct: 36 EIHQSELDLAIANLDPQFAQMPDDQKKVAALSGAIDVKLLAGSAIGEKMQDDPAYKQRMA 95
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV----REYLIRTVLFSIPDNKLQNQ 195
++ F ++ + + K I +E R +L D
Sbjct: 96 F-IADRELHNAFFKKHVVDVTTDEEVKARYEKEIAALPKEQEIHARHILVKTEDEAKDVI 154
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQ 254
+ AE ++ + G + + + P+F+
Sbjct: 155 KQLDAGKDFAELAKEKSTDS-----------SGSDGGDLGFFSKGRMVPEFEEAAFALKP 203
Query: 255 NNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH--EAEYVKKLRSN 311
T P +Q G I + + RD A ++ ++ + +Y+ L
Sbjct: 204 GTYTKTPVKSQFGFHVIKVEEIRDA-------APPKFEDVQQQVRQLVMRDKYLALLEKA 256
>gi|60683327|ref|YP_213471.1| putative exported isomerase [Bacteroides fragilis NCTC 9343]
gi|60494761|emb|CAH09567.1| putative exported isomerase [Bacteroides fragilis NCTC 9343]
Length = 517
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 88/296 (29%), Gaps = 47/296 (15%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE- 79
+L+ + A + ING+ IT + + K +G K ++
Sbjct: 4 ILVGTLTCLFGAIAGHAQQDPVLMRINGQDITRSEFER---FCHRNKPSGIAGKETLKRC 60
Query: 80 ---LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+ LK +K+G+ + DF + ++
Sbjct: 61 ADLFVDMKLKLSAAQKAGLD-------------------TVSDFRTEME----------N 91
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQG 196
Y + ++ + Q E + + +P L +
Sbjct: 92 YHRA------LSRSYLTDSATDEAYAKKLYDQMKTRSAAGEVKVMRIFRYLPQTALPHHL 145
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQN 255
+ + D+ L D + D +L S +F+ +
Sbjct: 146 REAQILMDSLYHVLETHPDIDFKTLVNKYSDDKKEFWMGWLQTSQ---EFEEVAFSLKDG 202
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRS 310
+ P+ T KG++ I + +R++ ++ L + + E +V KL+S
Sbjct: 203 EYSKPFFTPKGIQIIKVTGRREIPPFEQIRGELIHKLSRRPGTDKEIELWVNKLKS 258
>gi|170288920|ref|YP_001739158.1| hypothetical protein TRQ2_1130 [Thermotoga sp. RQ2]
gi|170176423|gb|ACB09475.1| conserved hypothetical protein [Thermotoga sp. RQ2]
Length = 581
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 86/280 (30%), Gaps = 31/280 (11%)
Query: 46 ING---EVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+N +++ I I+L L + L+ + + + + EK+ I +
Sbjct: 70 VNDYYSNLLSSYQI---ISLDPLFEEP-RLKALIADVFLQQKVVLYYAEKNDIKPSKKEI 125
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQGI----GDNHFKQYLAIQSIWPDVVKNDFMLKYG- 157
N + + G N+ + + +Q V K G
Sbjct: 126 NQEVNNVIQTIKNDQNQLNRIERTYGSLSNYEKNYLEPQIRVQLTIKKV-----QEKVGV 180
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
E EI ++ K ++Y + D+ QGF+ K S + + +
Sbjct: 181 VTEDEIKKYFEENKEDLQKQYDRVDIEAVSFDSSSTAQGFIAK------ASEVGFDEAAS 234
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + + G + ++ + + P+ +
Sbjct: 235 SMNVTVQPFSNATRG----IFPDEIDTAL---FSATPGSIVGPFFFLDQWYVFRVKTSSV 287
Query: 278 LGGEIALKAYLSAQNTPTKIEKHE-AEYVKKLRSNAIIHY 316
L A + + + TK+E+ + +++++ + Y
Sbjct: 288 LTDFNAFENSDAYSDVKTKLEQEKFQKWLEEFMKEENLSY 327
>gi|229044062|ref|ZP_04191750.1| Foldase protein prsA 1 [Bacillus cereus AH676]
gi|228725273|gb|EEL76542.1| Foldase protein prsA 1 [Bacillus cereus AH676]
Length = 94
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306
K ++P T G I + DK++L +K + +++ ++ V
Sbjct: 10 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDIEQQRLQDTTGKWKQQVVN 69
Query: 307 KLRSNAII 314
L +A I
Sbjct: 70 DLLKDADI 77
>gi|32475387|ref|NP_868381.1| peptidyl-prolyl cis-trans isomerase C2 [Rhodopirellula baltica SH
1]
gi|32445928|emb|CAD78659.1| peptidyl-prolyl cis-trans isomerase C2 [Rhodopirellula baltica SH
1]
gi|327537999|gb|EGF24693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopirellula
baltica WH47]
Length = 93
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPY 261
+D ++ + +F+S S G + +F ++ + P
Sbjct: 18 QDLKDQIEKGQDFGAIAAEFSSCPSGKSGGALGTFSPGQMVKEFDEVVFSGELGKVHGPV 77
Query: 262 VTQKGVEYIAICDKRD 277
TQ G I I + D
Sbjct: 78 KTQFGYHLIEITQRVD 93
>gi|124004173|ref|ZP_01689019.1| putative exported isomerase [Microscilla marina ATCC 23134]
gi|123990243|gb|EAY29742.1| putative exported isomerase [Microscilla marina ATCC 23134]
Length = 777
Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 88/310 (28%), Gaps = 49/310 (15%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQ 66
S K L + + + K+ + S++ T+ I D ++ K
Sbjct: 5 SVCTKAGLYVLGLCVALVSCTTTKKTTSSKSKVIATLGANPIYLSDFKYTYEKSLKNKDS 64
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ I LK +K GI A N LS
Sbjct: 65 AYTRSSVSSYLDLYIKFKLKILAAQKKGIDTTD----------AFNNELS---------- 104
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+K+ LA ++ +E + ++K E + +L
Sbjct: 105 ------TYKEQLA----------KPYLTDKAKVEELVREAYDRLKE----EVRVSHILVK 144
Query: 187 IPDNKLQNQGFVQ-KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ V +I + ++ L + G Y +
Sbjct: 145 VDKEAEPQDTVVAYNKILELRKTVLNGKSFEQVASTHSQSPSAKQGGNIGYFTALQMVYP 204
Query: 246 FQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
F+N ++Q + ++ T+ G ++ + D+R G K + + + +
Sbjct: 205 FENASYQTQVGSISDLLRTKFGYHFLKVTDRRKASG----KIQTAHIMIMQPAKANAKDS 260
Query: 305 VKKLRSNAII 314
++ R I
Sbjct: 261 IEAKRKIDKI 270
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 17/188 (9%)
Query: 137 YLAIQSIWPDVVKNDFMLKYGNLEMEIPAN------KQKMKNITVREYLIRTVLFSIPDN 190
+ A+Q ++P + + G++ + K + + ++ P
Sbjct: 196 FTALQMVYP-FENASYQTQVGSISDLLRTKFGYHFLKVTDRRKASGKIQTAHIMIMQPAK 254
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES-----DLHPQ 245
KR D RL+ +D +KL + S+ D +L +
Sbjct: 255 ANAKDSIEAKRKIDKIYERLKAGEDWDKLCRQFSE--DQPSKNKGGVLPEFGVGEAIPEF 312
Query: 246 FQNLLKKSQ-NNTTNPYVTQK-GVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEA 302
Q + + + + P T G I + KR L ++ ++ + ++++
Sbjct: 313 EQASFQLKEVGDFSKPVYTPYSGWHIIKLMKKRTLDTFTEVEPFIRQKVAKDSRLKVTHR 372
Query: 303 EYVKKLRS 310
++ KL+
Sbjct: 373 SFIAKLKK 380
>gi|319787632|ref|YP_004147107.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoxanthomonas
suwonensis 11-1]
gi|317466144|gb|ADV27876.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudoxanthomonas
suwonensis 11-1]
Length = 654
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 45/147 (30%), Gaps = 7/147 (4%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNK-LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A KQ+ + R L +L +P+ K++ + +
Sbjct: 277 EAEKQRFGDPERR--LASHILVRVPEGGDAAAAEAKAKQLAGQAAAPGADFAALAREHSE 334
Query: 223 ASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
D + G ++ + + F Q L T+ P T+ G + + + + G
Sbjct: 335 DPGSRD-TGGDLGWVEQGMMVEPFEQALFAMQAGETSGPVKTEFGWHVLQLREVQP-GAL 392
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ + + + + +L
Sbjct: 393 KPFE-EVREELAREQAQADRERAYSEL 418
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 17/148 (11%), Positives = 38/148 (25%), Gaps = 19/148 (12%)
Query: 55 DISKR---IALLKLQKING----------ELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
D +R +L Q+ E ++ + EL+ E + + G+
Sbjct: 74 DFRQRLEQARMLARQQQGEAFDPREFEGIENKRRILDELVDEKVMLLASARDGVVVSDAA 133
Query: 102 VNYFFVQH-ARNTGLSAED--FSSFLDKQ--GIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
V + A + + L Q F+ + +V
Sbjct: 134 VREYIASIPAFQVDGKFDQNAYQMALSSQFPPRTPRQFEDLVRTTL-RQSLVPVGVGSSA 192
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVL 184
+ E+ + E + +
Sbjct: 193 FVTDAELDRLLRLSGETRDVELALMPEI 220
>gi|164688476|ref|ZP_02212504.1| hypothetical protein CLOBAR_02121 [Clostridium bartlettii DSM
16795]
gi|164602889|gb|EDQ96354.1| hypothetical protein CLOBAR_02121 [Clostridium bartlettii DSM
16795]
Length = 250
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 89/286 (31%), Gaps = 62/286 (21%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALL----KLQKINGELEKIAVQELIVETLKKQEIEKS 93
M +I + + I++ DI I L Q E K +++L+ + L +
Sbjct: 1 MEKKILAKVGDKEISNIDIDNAIQGLDPYQAQQFQTEEGRKYVLEDLVNQELLYMYAK-- 58
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
N ++ E F + + I N KQY+ Q +
Sbjct: 59 -----DNKIDED------------EAFKKEMAE--IEKNVLKQYVINQI----------L 89
Query: 154 LKYGNLEMEIPANKQKMK-NITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAE--ESR 209
+ E A + K N + E + +L D++ + + + E
Sbjct: 90 TSVKLTDEEKQAFYEANKTNFSNPETANAKHILV---DSEEKANEILAQIKAGDVTFEDA 146
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
R C ++ G + P+F+ + + + P TQ G
Sbjct: 147 ARANSTCPSKDQ---------GGDLGTFGRGQMVPEFEEATFAMNVGDVSEPVKTQFGYH 197
Query: 269 YIAICDKRDLG-------GEIALKAYL---SAQNTPTKIEKHEAEY 304
I + K + + K + + K+++ +A++
Sbjct: 198 LIKLEAKNEPSIPAYEEIADKVEKTLMFQKQGEVYKNKLDEVKAKF 243
>gi|310778377|ref|YP_003966710.1| trigger factor [Ilyobacter polytropus DSM 2926]
gi|309747700|gb|ADO82362.1| trigger factor [Ilyobacter polytropus DSM 2926]
Length = 429
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 59 RIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
+++ + ++K+N +L +A Q++ ++ + IT + + A+ G+ E
Sbjct: 333 KMSGVTMEKMNEQLRPMAAQKVKLDVILDAIATAEDITVSDEELADKMEEVAKMYGMDTE 392
Query: 119 DFSSFLDKQGIGDNHFKQYLAIQ 141
+ L K G N FK+ + I
Sbjct: 393 KLNEELTKAG-NLNTFKENVKID 414
>gi|312194536|ref|YP_004014597.1| hypothetical protein FraEuI1c_0649 [Frankia sp. EuI1c]
gi|311225872|gb|ADP78727.1| hypothetical protein FraEuI1c_0649 [Frankia sp. EuI1c]
Length = 254
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 23/69 (33%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+L++ + L+ L E K GIT + ++ +A S F G
Sbjct: 73 DLQRRTLGNLVEYQLDLTEARKRGITLSPQEADAYYQSYAIFGSGSVAAFEQAGASAGFA 132
Query: 131 DNHFKQYLA 139
+ +
Sbjct: 133 PEDLRTIIR 141
>gi|261403937|ref|YP_003240178.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
gi|261280400|gb|ACX62371.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
Length = 311
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 91/292 (31%), Gaps = 32/292 (10%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ W S+ +I IT+ + + +L+K G + + ++ E +
Sbjct: 36 ASPPWKTGSQPVASIQDRAITEDE-----WVDELKKRYG---REMLMTMLNRHAVALEAK 87
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
GI + V +R+ G S D+ GI ++ K + + + +D
Sbjct: 88 AKGIDVTTAEVETEIEVMSRSYGSKERFLSEMEDQLGITESELKTETTYRLLLEKIATSD 147
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
++ ++ + + + ++ + + + + RL
Sbjct: 148 VHIEEQQIDSYLEQYPDQFRP--KKQLNLSMI------------EVASEDEAERVMDRLE 193
Query: 212 LPKDCNKLEKFAS--KIHDVSIGKAQYLLESD--LHPQ-FQNLLKKSQNNTTNPYVTQKG 266
+D L S + G+ + E D L P+ + L + P
Sbjct: 194 NGEDFADLAAQVSLDEYTREDGGQIGLVEEDDPFLPPELLEAALSLEPGDIAGPISLTDT 253
Query: 267 VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN--AII 314
+ + D E +++ + Q + ++LR A I
Sbjct: 254 YAIVYVRDIIEPQAPSEESIRKAVRKQLALEQSVSLTE-LERQLREKYEARI 304
>gi|241589917|ref|YP_002979942.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12D]
gi|240868629|gb|ACS66288.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ralstonia pickettii
12D]
Length = 278
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 51/157 (32%), Gaps = 7/157 (4%)
Query: 21 VLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
+ ++ + + +WA + + T+NG IT + + +A + + Q
Sbjct: 9 LATAAGLMLLAASHAWADGLPASVVATVNGTPITQAQLDRAVAQTGAGANP-NVVQALKQ 67
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY- 137
+LI L +Q+ K+ V + A + ++ + + D K
Sbjct: 68 QLIARELFRQQAAKNPAYEKQPAVQQAVKE-AHDAAITQLWLKDNIRPSPVTDEQVKARY 126
Query: 138 --LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ + + ++ A ++ +
Sbjct: 127 DAIVASLGDKEYKARVIQVGDDVTASQVIAQLKQGGD 163
>gi|153837998|ref|ZP_01990665.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus
AQ3810]
gi|149748606|gb|EDM59465.1| peptidyl-prolyl cis-trans isomerse D [Vibrio parahaemolyticus
AQ3810]
Length = 459
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 70/222 (31%), Gaps = 19/222 (8%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK--QYLAIQSIWPDVVKNDFMLK 155
D TV + A+ L+ E+ ++ ++F + + + + ++
Sbjct: 32 DIRTVTIDLAEFAKKVELTDEEIQAYYKA---NPDNFTRPEQVKVSYVELSAEALKKQIQ 88
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ +++ ++ K + + + +L ++ Q + +
Sbjct: 89 VTDEDVKKYYDEHLDKYSSEEQRRVAHILVE-----GDDEAKAQAILDELNAGADFAAVA 143
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAIC 273
K + F S + G ++ + P F+ K+ + + + G I +
Sbjct: 144 QEKSDDFGSAENG---GDLGWIERDVMDPAFEEAAFALKNPGDMSGLVKSDFGYHIIKLE 200
Query: 274 DKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ +D + A + + K E +L A
Sbjct: 201 ELKDAVAKPFDEVA-AEIKQELVDQKAVDQFYELQNELERVA 241
>gi|262374583|ref|ZP_06067857.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205]
gi|262310579|gb|EEY91669.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter junii SH205]
Length = 361
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 54/157 (34%), Gaps = 7/157 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFS-IPDNKLQNQGFVQKRIKDAEESRLRLPKDCN---KLEK 221
+ IT +R +L + +P++ + + E+ + +
Sbjct: 191 EQNIEDFITDPVMSVRHILLACLPEDGEERLKLKKTAYDYIEQIQSDSNPAAAFIELARQ 250
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGG 280
++ G + + P+F+ +L K + P ++ G + + +K+
Sbjct: 251 HSACPSKEQGGDLGVISKGQTVPEFEKVLFKLETGLAPSPIESRYGFHVVDVLNKQQGIQ 310
Query: 281 EIALK--AYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ A +S + + + +Y+ L +A I
Sbjct: 311 MTYEQVSAAISNKLSQKAFHQSLCDYLFTLADDAEIE 347
>gi|193213470|ref|YP_001999423.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum
NCIB 8327]
gi|193086947|gb|ACF12223.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobaculum parvum
NCIB 8327]
Length = 701
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 28/95 (29%), Gaps = 2/95 (2%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLL 238
+L + + Q + + K++ + G +
Sbjct: 349 ASHILIRVNPADKASVESGQALARKILDELKNGASFAQLAAKYSQDPGNAQRGGFLGWFT 408
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAI 272
+ + P+F Q + P +T+ G+ I I
Sbjct: 409 KERMVPEFTQAVFSGKPGQVVGPVLTRFGLHIIKI 443
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 13/104 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL---QKING- 70
L+ + LI+F + + + +NGE I + + ++ Q+ G
Sbjct: 18 LVAAFVGLIVFEWGMNFTGPKQSRGGDVGA-VNGEPIPAAEYEQLYNMVSTSFRQRNPGV 76
Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
L + A ++ +TL Q ++K + V
Sbjct: 77 EVTSRIDAGLREQAWNMVVDQTLINQLLKKYAVQVSDQEVLEAV 120
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 82/257 (31%), Gaps = 27/257 (10%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
V++L +L + I++ + F + + F + A+ L F + +
Sbjct: 454 SEVVRQLKPSSLTSESIKRKAMVFRDDAESKGFAETAKLQKLDVVQTGDFTRQTLVS--- 510
Query: 134 FKQYLAIQSIWPDVVKN-DFMLKYGNLEMEIPANKQ------KMKNITVREYLIRTVLFS 186
+ + V + F K G + I + KN T L +
Sbjct: 511 -------KLGMDEDVASFAFSSKDGAISQVIKNDNGFVVMKLLTKNDTGYRLLDDELKEM 563
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL--ESDLHP 244
I ++ + + K AE S+ + + + + ++ G +
Sbjct: 564 IKAELVREKQGTALKAKLAELSKSS-GGSLDAIVQSNPGLRKITSGIISWRDGNIDGYGS 622
Query: 245 QFQNLLKKSQN----NTTNPYVTQKGVEYIAICDKR-DLGGEI-ALKAYLSAQNTPTKIE 298
+ L++ + P T G + + ++ G ++ K + Q K E
Sbjct: 623 D-RRLVEAMAGMELNKLSAPVQTSNGFALVKLDGRQLPYGLDLEVEKKRILPQLMKIKQE 681
Query: 299 KHEAEYVKKLRSNAIIH 315
+ EY + R A I
Sbjct: 682 QLFNEYFEAARRTAKIE 698
>gi|91790420|ref|YP_551372.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
gi|91699645|gb|ABE46474.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas sp.
JS666]
Length = 289
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR--LRLPKDCNKLEKFASKI 226
K + + + +R +LF++ V E S +R + + ++
Sbjct: 120 KPQFVVGQALHVRHILFAVTPGVNVQALTVHAERALLELSHKGVRPERFAQLAAELSNCP 179
Query: 227 HDVSIGKAQYLLESDLHPQFQNLL------KKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
G ++ D P+ L + + T+ G I + ++R G
Sbjct: 180 SSAQGGDLGWIGPDDCAPELATELFHLQHAQTGTGVHPRLFHTRFGFHIIDVLERR--SG 237
Query: 281 EIALKAYLSAQNTP 294
+ +
Sbjct: 238 RQPAYEEVRERIAA 251
>gi|239941819|ref|ZP_04693756.1| putative lipoprotein [Streptomyces roseosporus NRRL 15998]
gi|239988279|ref|ZP_04708943.1| putative lipoprotein [Streptomyces roseosporus NRRL 11379]
gi|291445266|ref|ZP_06584656.1| lipoprotein [Streptomyces roseosporus NRRL 15998]
gi|291348213|gb|EFE75117.1| lipoprotein [Streptomyces roseosporus NRRL 15998]
Length = 217
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 49/150 (32%), Gaps = 15/150 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--------- 64
+ + P++S + GE I + +R A ++
Sbjct: 5 RRTALTVLAATLVAAPLLSACGNQAHPGAAAVVGGERIEVSAVQERAAEVRAAQESSPQA 64
Query: 65 --LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF-FVQHARNTGLSAEDFS 121
L +G+L + + LI + + E +G+T + A+ G E F
Sbjct: 65 AQLVNKSGQLNRAKLHGLIFGRILDRAAEDAGVTVSRKEIQEMRQAGLAQQGG--EEQFE 122
Query: 122 S-FLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ L ++ + + + + P + +
Sbjct: 123 AMMLQQRWVAPDQIDADMRQEVQLPKLARA 152
>gi|226506196|ref|NP_001152416.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays]
gi|195656053|gb|ACG47494.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays]
Length = 151
Score = 40.4 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
++++ G + + FQ + + + P+ + G +I +C+ R
Sbjct: 92 AQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPEGTVSAPFKSTHGYHFI-LCEVR 149
>gi|225872276|ref|YP_002753731.1| hypothetical protein ACP_0603 [Acidobacterium capsulatum ATCC
51196]
gi|225791583|gb|ACO31673.1| hypothetical protein ACP_0603 [Acidobacterium capsulatum ATCC
51196]
Length = 245
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 13/147 (8%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDI--SKRIALLKLQKINGELEK--IAVQELIVETLK 86
+ S + R+ +NG+V+ D+ +R++ L+ + + E A + LI+ TL
Sbjct: 26 AASGSPVVLDRVIAIVNGQVLLQSDVDEERRLSALEPLRNSAGPESIDQAARHLILRTLV 85
Query: 87 KQEIEKSGI--TFDSNTVNYFFVQHARNTGL-------SAEDFSSFLDKQGIGDNHFKQY 137
+++++ T + S E ++ FL K G+ + +
Sbjct: 86 LEQMKEQDQPTTVSQKWTQRGLTELRGTMTRCAPYSCTSQEGWALFLKKHGLTEGEAEAR 145
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ + + F +I
Sbjct: 146 WSQRMAIERFIDLRFRAGIHITREQID 172
>gi|206603475|gb|EDZ39955.1| Probable peptidil-prolyl cis-trans isomerase [Leptospirillum sp.
Group II '5-way CG']
Length = 289
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 60/285 (21%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-ELEKIAVQELIVETLKKQEIEKSGITFD 98
+ + I+ D+ K++ + L + + +++ +L E K G+
Sbjct: 30 DSVLAKVGDTTISQADLKKKLDSMGLASSKDPNVTSELLNQMVDNSLLAMEARKEGLDKT 89
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI---QSIWPDVVKNDFMLK 155
FK+ + + + ++K D K
Sbjct: 90 PE---------------------------------FKKKMHAYETKLLRKALLKKDVDDK 116
Query: 156 YGNLEMEIPANKQK-MKNITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ +I K K+I Y +R V+F KR + S L+
Sbjct: 117 VKVTDSDIMNYYNKHQKDIKQPGYVDVRQVVFP--------DEKTAKR----DFSLLKKN 164
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272
KL K G + E + P+F + + + T P + G+ Y I
Sbjct: 165 GGFKKLTKMFKG------GPVGKIYEGTVPPKFVSFFFGVPEGSITGPIPLKDGIHYFKI 218
Query: 273 -CDKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + + + + + V LRS +
Sbjct: 219 DRSVKGVQLTLDQARDGIRNYLRNRQNKTIYQTLVNHLRSTTTVQ 263
>gi|258592919|emb|CBE69228.1| putative Trigger factor (TF) [NC10 bacterium 'Dutch sediment']
Length = 431
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L K K L++ET+ KQE G+ + +N A E
Sbjct: 337 TLAKARELASKRVQDSLLLETVAKQE----GLEVSEDELNKEVESAAATLNRKPEALRDM 392
Query: 124 LDKQGIGDNHFKQYL 138
L+++G F+ L
Sbjct: 393 LEREG-RIEAFRTRL 406
>gi|261337229|ref|ZP_05965113.1| trigger factor [Bifidobacterium gallicum DSM 20093]
gi|270277583|gb|EFA23437.1| trigger factor [Bifidobacterium gallicum DSM 20093]
Length = 457
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ ++E+ A + L + + EK + + V F A+ G+ F +
Sbjct: 322 ETKKQVEEDAEKALRDQMVLDALAEKLDVEVSQSDVFNFLASIAQQYGMDPNQFIQAILS 381
Query: 127 QG 128
G
Sbjct: 382 NG 383
>gi|116623044|ref|YP_825200.1| hypothetical protein Acid_3948 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226206|gb|ABJ84915.1| hypothetical protein Acid_3948 [Candidatus Solibacter usitatus
Ellin6076]
Length = 196
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 6/143 (4%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQK-----INGELEKIAVQELIVETLKKQEIEKSG 94
R+ I V+T+ ++++ + + +L I+ K LI + L + E+ +
Sbjct: 23 DRVAIVIGKHVLTESEVAENLRITELINGEPLDISPAKRKEEADRLIDQELLRNEMRLTN 82
Query: 95 IT-FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
+ Q S + + L + ++ KQ LA Q + F
Sbjct: 83 FAMPSAAEAETVLRQFIGKRYPSQAGYQTALKTYDVTEDELKQQLAWQLALLRFTEQRFR 142
Query: 154 LKYGNLEMEIPANKQKMKNITVR 176
+ + Q + +
Sbjct: 143 PLETASAAQDNGSSQSADRASNK 165
>gi|227823202|ref|YP_002827174.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Sinorhizobium
fredii NGR234]
gi|227342203|gb|ACP26421.1| putative foldase/peptidyl-prolyl cis-trans isomerase [Sinorhizobium
fredii NGR234]
Length = 284
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 84/245 (34%), Gaps = 48/245 (19%)
Query: 39 SSRIRTTINGEVITDGDISKRIALL--KLQKINGEL-EKIAVQELIVETLKKQEIEKSGI 95
+ + + + I ++ I L +LQ++ E A+ +I L ++ EK G+
Sbjct: 26 TDPVVAKVGDQEIRQSELDLAITSLDPQLQRMPEEQKRAAALSAVIDVKLLVKDAEKEGL 85
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ +FL ++ + + FK+++ + ++ + VK +
Sbjct: 86 ----------------QNDAVFKQRVAFLTERELHNAFFKKHV-VDAVTKEEVKARY--- 125
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+K+ E R +L + + IK+ + K
Sbjct: 126 ----------DKEIAAIPAQEEVKARHILVKT-------EDEAKAIIKELDA-----GKS 163
Query: 216 CNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAI 272
+L K S + G Y + + P+F+ + T P +Q G I +
Sbjct: 164 FVELAKAKSTDPNKDDGGDLGYFTKGRMVPEFETAAFALEKGTYTKTPVKSQFGFHVILV 223
Query: 273 CDKRD 277
DKR
Sbjct: 224 EDKRP 228
>gi|94991309|ref|YP_599409.1| foldase protein PrsA [Streptococcus pyogenes MGAS10270]
gi|94544817|gb|ABF34865.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS10270]
Length = 316
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 87/261 (33%), Gaps = 23/261 (8%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 18 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 69
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
++ + + + V + Q A G S F + L + G+ +K+ + +
Sbjct: 70 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIRL 123
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+V+ + N E + ++ + + F ++ V+
Sbjct: 124 ----TKLVEYAVKEQAKN-ETISKKDYRQAYDAYTPTMTAEIMQFEKEEDAKAALEAVKA 178
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
D +K + + ++ S L ++ + + +P
Sbjct: 179 EGADFAAIAKEKTIAADKKTTYTFDSGETTLPAEVVRAASGLKEGNRSEIITA----LDP 234
Query: 261 YVTQKGVEYIAICDKRDLGGE 281
+++ I + K +
Sbjct: 235 ATSKRTYHIIKVTQKATKKAD 255
>gi|126641683|ref|YP_001084667.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter
baumannii ATCC 17978]
gi|126387567|gb|ABO12065.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter
baumannii ATCC 17978]
Length = 286
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
+ + K + ++ + ++ I +++ ++++ +
Sbjct: 156 TDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSFAQAA 215
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D + L+E+ F + K+ + P TQ G I
Sbjct: 216 AQFSE--DPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIE 269
>gi|332284237|ref|YP_004416148.1| peptidyl-prolyl cis-trans isomerase D [Pusillimonas sp. T7-7]
gi|330428190|gb|AEC19524.1| peptidyl-prolyl cis-trans isomerase D [Pusillimonas sp. T7-7]
Length = 655
Score = 40.4 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 16/156 (10%)
Query: 8 SLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA------ 61
+ ++L+ +L F ++ + Y ++ T+ IT D +
Sbjct: 7 THQRLMQLVLLVLILPSFVLIGVSGYTNYVSGDHDIVTLGDTSITQQDFDQARRNQLQQL 66
Query: 62 -------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR--- 111
+ ++ LI T+ + K + + + +
Sbjct: 67 QQSSQGAFDPAILDSPAARSALLESLIDRTVLVETATKERFSVSDSVLRQTIASMPQLQV 126
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ SAE ++ L G+ F+Q + V
Sbjct: 127 DGQFSAERYNDVLASAGLTTRDFEQSQRGELALGRV 162
>gi|207722835|ref|YP_002253270.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia
solanacearum MolK2]
gi|206588019|emb|CAQ18600.1| ppic-type peptidyl-prolyl cis-trans isomerase protein [Ralstonia
solanacearum MolK2]
Length = 278
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRIALLKLQKING 70
+ L + ++ + ++WA +S+ + T+NG IT + + +A
Sbjct: 1 MNRLFPRKLAAAAGLMLFAASQAWADGLSAGVVATVNGTPITQAQLDRAVAQTGAGANP- 59
Query: 71 ELEKIAVQELIVETLKKQEIEK 92
+ + Q+LI L +Q+ K
Sbjct: 60 NVVQALKQQLIARELFRQQAAK 81
>gi|257458734|ref|ZP_05623857.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
gi|257443722|gb|EEV18842.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
Length = 485
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 53/375 (14%), Positives = 107/375 (28%), Gaps = 82/375 (21%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA-------- 61
S + + + V +Y A + + IT+ +++ + +
Sbjct: 11 SLIPTIWISTIAFVGAGFVGWGAYDMNANRAGSIARVGQISITNQELNTKYSELYNRLSA 70
Query: 62 -----LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF----------- 105
+ Q N L++IAV +LI E + GI V F
Sbjct: 71 MSDGQFTQEQAKNMHLDQIAVDQLIGEAYFLNFAKDLGIQASDKDVAEFVVSSPNFQENG 130
Query: 106 ------FVQHARNTGLSAEDFSS------FLDKQGI------GDNHFKQYLAIQS----I 143
+ RN+GL+ ++F L+K G + + A Q +
Sbjct: 131 AFSKELYDNVVRNSGLTKKEFERNLQKVLTLEKLGKALKITPSPKIVEAFAASQLMQDKV 190
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+++ D + + + E++ +K +T ++Y + F P N+ + K K
Sbjct: 191 SAEIIYADANVTFSDDELKKFWEGEKSHFMTEKKYTLGA-YFVAPSKADVNETELSKFYK 249
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDV-------------------------SIGKAQYLL 238
+ R +KL FA DV +
Sbjct: 250 E---HRGEYRSLDDKLLDFAEAKPDVLKDYRMDQVKKDATKDYLEIKKGKLDTNETIVAT 306
Query: 239 ESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
S+ + + P+ + G + E + + E
Sbjct: 307 ASNFP--ISEIEVAKPGDVIKPFEYKGGYLIAKLNGV-----EQPRQMSFEEAKSLASKE 359
Query: 299 KHEAEYVKKLRSNAI 313
+ + L A
Sbjct: 360 FETKKRKELLEKRAQ 374
>gi|162455542|ref|YP_001617909.1| hypothetical protein sce7260 [Sorangium cellulosum 'So ce 56']
gi|161166124|emb|CAN97429.1| unnamed protein product [Sorangium cellulosum 'So ce 56']
Length = 358
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 15/110 (13%)
Query: 18 TYFVLIIFCIVPIVSYKSWA----------MSSRIRTTINGEVITDGD----ISKRIALL 63
+ L+ C P + S A S+R+ + VIT GD + +
Sbjct: 14 SLVALVAGCDEPALQVPSDAGDPVFGLTAEQSARVLAKVGDRVITLGDFGRTLERMDQFD 73
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
+L+ E + + ELI L E + G+ D V Q R
Sbjct: 74 RLRYQTKERRRELLSELIDAELLALEARRRGLDKDPA-VEDTIRQILREA 122
>gi|157151667|ref|YP_001450850.1| foldase protein PrsA [Streptococcus gordonii str. Challis substr.
CH1]
gi|189037918|sp|A8AYJ0|PRSA_STRGC RecName: Full=Foldase protein prsA; Flags: Precursor
gi|157076461|gb|ABV11144.1| proteinase maturation protein, putative [Streptococcus gordonii
str. Challis substr. CH1]
Length = 309
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 94/294 (31%), Gaps = 48/294 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ + + + + + S + T+ G+ IT + K N +++ +
Sbjct: 9 AVTLLSVAVLAACGKTSGSDKDIITMKGDTITVSE------FYDKVKSNPSAQQVLLNLT 62
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E +KQ G V + + ++ G ++F+ L + G+ ++ +++ +
Sbjct: 63 IKEVFEKQ----YGKKVTDKEVEEAYEKSSKAYG---DNFARVLAQAGLTEDAYREQIR- 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
N +E K K +T Y ++ + +
Sbjct: 115 ----------------TNKLVEYAVKKAAEKELTDENYKAAYEAYTPEVTAQIIKVDSED 158
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ K+ + D +L K S D G+ ++ + P
Sbjct: 159 KAKEVLAAAKAEGADFAQLAKDNSTDGDTKDKGGEIKFDSAATNVPDAVK---------- 208
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRS 310
G+E A+ D + +Y + +K EK +Y KL+
Sbjct: 209 ---KAAFGLEANAVSDLVTVRSNQGQASYYIVKLV-SKTEKSSKWEDYKDKLKQ 258
>gi|218128451|ref|ZP_03457255.1| hypothetical protein BACEGG_00019 [Bacteroides eggerthii DSM 20697]
gi|217989342|gb|EEC55655.1| hypothetical protein BACEGG_00019 [Bacteroides eggerthii DSM 20697]
Length = 557
Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 60/170 (35%), Gaps = 16/170 (9%)
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNIT-----VREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
+ + Y +E A ++ + + +R + +P N +
Sbjct: 134 RARLVKSYLTDTIEADAAARRWYDRMKAHHRGGQVRVRHIFKYLPQNVSGDALRDAVARM 193
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYV 262
D+ LR N + + D ++ ++ + +F+++ + + +
Sbjct: 194 DSIYEYLRKNPGDNAFDACVERFSD--DKRSLWVSWLQMPVEFEDVAFELPVGGVSQSFF 251
Query: 263 TQKGVEYIAICDKRD------LGGEIALKAYLSAQN--TPTKIEKHEAEY 304
T +G+ + + ++R+ + EI + + ++EK + EY
Sbjct: 252 TPQGIHIVKVLERRELPPFEKVKDEIMARQSRHEADRGVEVQVEKLKKEY 301
>gi|257093852|ref|YP_003167493.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046376|gb|ACV35564.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 635
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 50/151 (33%), Gaps = 24/151 (15%)
Query: 24 IFCIVPIVSYKSWAMSSRIR--------TTINGEVITDGDISK--RIALLKLQKING--- 70
+F + + + W + S +R ++ IT + R+ +++++ G
Sbjct: 15 VFLALITLPFAFWGVDSYVRNSGAGTDLASVGDSKITRPQFDQAWRVQQDRMRQVLGANF 74
Query: 71 --------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAED 119
E + + L+ + L E K + + + + N S
Sbjct: 75 RPESMNTPEAKLAVLNSLVDQRLLLIEAAKDRLAVGDDLLREVIGKIPALQENGQFSLAR 134
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ + L QG+ + F+ + +V
Sbjct: 135 YRAVLAAQGMSQSQFEAQVRQDLTLQQLVAA 165
>gi|297538717|ref|YP_003674486.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp.
301]
gi|297258064|gb|ADI29909.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylotenera sp.
301]
Length = 633
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 18/187 (9%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGD--- 55
M ++ T ++ + I F + I SY S A ++ + G I+ D
Sbjct: 1 MLDQIRTVAQGWVGKALLALITIPFALFGIDSYLSSAGNNVAVAKVGGNSISVQAYDNAL 60
Query: 56 ------ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN---YFF 106
+ + Q + E++ + + +LI + L EI + + +
Sbjct: 61 KNMRNRLQSEGKFEQAQLDSPEVKSLVLDQLINKQLLSDEIHNAKYAISDSQLATYVTGM 120
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD----VVKNDFMLKYGNLEME 162
+ ++ S E + L + + + F+ + + + + F+ E+
Sbjct: 121 PEFQKDGKFSQELYDQTLSQNQLSPSKFEAGMRADLLAQQAQDGIARLGFISNARADEVL 180
Query: 163 IPANKQK 169
AN+Q+
Sbjct: 181 KLANQQR 187
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 77/263 (29%), Gaps = 26/263 (9%)
Query: 54 GDISKRIALLKLQKINGELEKIAV-QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN 112
+ R LL Q +G + E LK ++ + +
Sbjct: 148 FEAGMRADLLAQQAQDGIARLGFISNARADEVLKLANQQRV---VTVSEIKT--KDFVDQ 202
Query: 113 TGLSAEDFSSFLDKQG---IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI------ 163
+ E+ ++ ++ I K + + +FM + E+
Sbjct: 203 VTVKPEEVKAYYEQHKNKLIVPEQVK------IEFLSLAPVNFMRNVNVSDDEVKKYYDD 256
Query: 164 -PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
A Q + LI + + P+ K Q + ++ + ++ + + K +
Sbjct: 257 NAAKFQGNEQRRASHILIAFGVSATPEQKQQAKAKAEEILAQIKKDPSKFEQLAVKNSQD 316
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
V G + F++ N ++ ++ G I + + +
Sbjct: 317 PGSA--VKGGDLGSFSRGAMVKPFEDAAFSMKVNQVSDLVESEFGYHIIKVTEISGQNAD 374
Query: 282 -IALKAYLSAQNTPTKIEKHEAE 303
+LK + K + A+
Sbjct: 375 FNSLKPQIKGDLMFQKAKDEFAK 397
>gi|238788012|ref|ZP_04631808.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia frederiksenii ATCC
33641]
gi|238723960|gb|EEQ15604.1| Peptidyl-prolyl cis-trans isomerase D [Yersinia frederiksenii ATCC
33641]
Length = 628
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERGRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T + V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDDQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDGKFDNNKYLELVNRMGYTPDQF 152
>gi|89892051|gb|ABD78868.1| peptidyl-prolyl cis-trans isomerase [Trypanosoma cruzi]
gi|322821330|gb|EFZ27686.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, putative
[Trypanosoma cruzi]
Length = 124
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT- 258
R +A + ++ + + S+ S G + ++ FQ + T
Sbjct: 48 RAMEALK-KINEGSSFADVAREYSEDKARSGGDLGWKRRGEMVGPFQEAAFALPKGGMTL 106
Query: 259 NPYVTQKGVEYIAICDKR 276
P T G I + DK+
Sbjct: 107 EPVKTSFGYHIILVEDKQ 124
>gi|71277915|ref|YP_270304.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea
34H]
gi|71143655|gb|AAZ24128.1| peptidyl-prolyl cis-trans isomerase C [Colwellia psychrerythraea
34H]
Length = 92
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 205 AEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYV 262
A ++ + KD ++ K S + G + P+F ++ + N P
Sbjct: 19 ALKAEIEAGKDFAEVAKEHSNCPSNAQGGDLGSFGPGQMVPEFDKVVFSAPLNTVQGPVQ 78
Query: 263 TQKGVEYIAICDK 275
TQ G + + +
Sbjct: 79 TQFGYHLLEVTAR 91
>gi|319639214|ref|ZP_07993965.1| hypothetical protein HMPREF0604_01589 [Neisseria mucosa C102]
gi|317399398|gb|EFV80068.1| hypothetical protein HMPREF0604_01589 [Neisseria mucosa C102]
Length = 290
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 101/306 (33%), Gaps = 41/306 (13%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN----GELEKIAVQEL 80
F +++ S + ++ T+NG+ I I ++A ++ N EL ++ +
Sbjct: 6 FASALMLALTSGTLFAQTLVTVNGQAIDSSVIDDQVASVRASNPNIQDTPELRQMLTERQ 65
Query: 81 IVETLKKQEIEKSGITFD---SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++ T+ QE +K + + A+ F + F+
Sbjct: 66 VISTVVTQEAKKLKLDQSAEFKAALEQARADAAKQGADKKPTFKTEWAA-------FEND 118
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
L Q+ +++ ++ E ++ A N +E + ++ +
Sbjct: 119 LLGQAFAAHIIR-----QFPVQEKDVKAAYNDFSNFYKGTQEVQLGEIV-------TDSN 166
Query: 196 GFVQKRIKDAEESRLRLPK----DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
QK I D + + + ++ K A I + L+ P ++ +
Sbjct: 167 SNAQKAIADLDAKKSFVSVLNQYSIDEAAKKAGGIPKAYV--PLKDLQESAPPLYEAVKD 224
Query: 252 KSQN-NTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKL 308
+ +T P + D+R++ A K + + ++ ++ L
Sbjct: 225 LKKGAHTKTPLQNGNLYAVFYVNDRRNVTVPSYEASKNEIGSDLQGARVNAA----IQSL 280
Query: 309 RSNAII 314
A I
Sbjct: 281 LKKASI 286
>gi|326790254|ref|YP_004308075.1| histidyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541018|gb|ADZ82877.1| histidyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 421
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD--NHFKQYLAI 140
E L ++ + F + A + L ++GI +H ++ +
Sbjct: 308 ERLIIVRDAENNAPLAPAMRDLFIGYRGDEAMMEAFKLVNALRQEGISAESDHLQRSIKA 367
Query: 141 QSIWPDVVKNDFMLKYGNLEME--IPANKQKMKNITVREYLIRTVLF 185
Q + + + + G E+E K+ +V + + V
Sbjct: 368 QMKFANKINARYSAIIGESELENGEIQLKEMESGDSVTVPMSQFVQM 414
>gi|268318986|ref|YP_003292642.1| MutS2 protein [Lactobacillus johnsonii FI9785]
gi|262397361|emb|CAX66375.1| MutS2 protein [Lactobacillus johnsonii FI9785]
Length = 788
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 14/193 (7%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEI----EKSGITFDSNTVNYFF 106
+ D+ K +L+ I G+ A I L E +S + + + +N
Sbjct: 467 MEFDLKKLAPTYRLRIGIPGQSNAFA----IAHQLGMNEAVVDKARSLMNDEDSDINKMI 522
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ T +AE L + K+ L W + + K E+ A
Sbjct: 523 ERLTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVRKQLEKAQEKADEMLAK 581
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K++ + + + + +++ ++ + + R NK+ + +
Sbjct: 582 KRQKADKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLAQNKVLQREKRR 637
Query: 227 HDVSIGKAQYLLE 239
HDVS+G +L
Sbjct: 638 HDVSVGDTVKVLS 650
>gi|262283150|ref|ZP_06060917.1| foldase prsA [Streptococcus sp. 2_1_36FAA]
gi|262261402|gb|EEY80101.1| foldase prsA [Streptococcus sp. 2_1_36FAA]
Length = 309
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 94/294 (31%), Gaps = 48/294 (16%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
+ + + + + + S + T+ G+ IT + K N +++ +
Sbjct: 9 AVTLLSVAVLAACGKTSGSDKDIITMKGDTITVSE------FYDKVKSNPSAQQVLLNLT 62
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I E +KQ G V + + ++ G ++F+ L + G+ ++ +++ +
Sbjct: 63 IKEVFEKQ----YGKKVTDKEVEEAYEKSSKAYG---DNFARVLAQAGLTEDAYREQIR- 114
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
N +E K K +T Y ++ + +
Sbjct: 115 ----------------TNKLVEYAVKKAAEKELTDENYKAAYESYTPEVTAQIIKVDSED 158
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ K+ + D +L K S D G+ ++ + P
Sbjct: 159 KAKEVLAAAKAEGADFAQLAKDNSTDGDTKDKGGEIKFDSAATNVPDAVK---------- 208
Query: 259 NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA--EYVKKLRS 310
G+E A+ D + +Y + +K EK +Y KL+
Sbjct: 209 ---KAAFGLEANAVSDLVTVRSNQGQASYYIVKLV-SKTEKSSKWEDYKDKLKQ 258
>gi|304315716|ref|YP_003850861.1| PpiC-type peptidyl-prolyl cis-trans isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777218|gb|ADL67777.1| PpiC-type peptidyl-prolyl cis-trans isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 323
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 70/232 (30%), Gaps = 37/232 (15%)
Query: 90 IEKSGITFDSNTVNYFF-VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
EK T + + + A N+ ++ E + K + N W V
Sbjct: 117 AEKEKFTATDKEITDEYNAEKATNSKVTKE-----MAKDNVLINKLVD------SWTKNV 165
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
K + E E N K + V+ +L + D K N+ + + +
Sbjct: 166 ------KVTDSEAEKYYNDNKSQFEVVK---ASHIL--VSDEKTANEIYDKLQK------ 208
Query: 209 RLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQK 265
+ +L K S + G+ + +F+N + P TQ
Sbjct: 209 ----GANFAELAKQYSIDTSTKDNGGELGEFTRGTMVTEFENAAFALKPGEISKPVKTQY 264
Query: 266 GVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHYY 317
G I K + +S TK + + + L+ A I +
Sbjct: 265 GYHIIKSEGKTTKSFNDVKSSIISY-LENTKKQNIFNQKSEALKKAAKIEKF 315
>gi|229523938|ref|ZP_04413343.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae bv.
albensis VL426]
gi|229337519|gb|EEO02536.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae bv.
albensis VL426]
Length = 619
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIDQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK--KLRSNA 312
+ + + + + + ++ Y K +L A
Sbjct: 363 KAPVVKPCSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|123443338|ref|YP_001007312.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090299|emb|CAL13165.1| peptidyl-prolyl cis-trans isomerase D [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 628
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERGRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDGKFDNNKYLELVNRMGYTPDQF 152
>gi|45435508|gb|AAS61067.1| putative potassium efflux system [Yersinia pestis biovar Microtus
str. 91001]
gi|108774774|gb|ABG17293.1| potassium efflux system [Yersinia pestis Nepal516]
Length = 1156
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 19/191 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F + + T ++++ + A +S I + T ++ ++ LL
Sbjct: 26 LFDPFLFCRQTMFTLVIIVLLLFSSTFVFGISAFASGINVDVP----TRSEVQSQLDLLS 81
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
QKI EK+A Q+L IE++ A + L
Sbjct: 82 KQKILSPAEKLAQQDLTQTLEYLDTIERTKQE-------------ANQLKQQLAQAPAKL 128
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G K A + L + + ++++ Y + +
Sbjct: 129 RQATEGLEALKSSSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSA--YNSQLIA 186
Query: 185 FSIPDNKLQNQ 195
++Q+
Sbjct: 187 LQTQPERVQSA 197
>gi|21230443|ref|NP_636360.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|21112006|gb|AAM40284.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 656
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ + Q N + + + +L+ E + + E +GI TV +
Sbjct: 81 QSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDATVRDYIAN 140
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 141 IPAFQIDGKFSPDQYRAALAQ-GTPPRT 167
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P T+ G
Sbjct: 323 GADFAALAKANSQDPGSKDAGGDLSWVEKGTMVKPFEDALFAMKAGDVVGPIKTEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
I + + + G+ + + Q +++ + L
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADADKAFADL 419
>gi|115360451|ref|YP_777588.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
gi|115285779|gb|ABI91254.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
Length = 262
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 17/141 (12%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLL 238
VLF++ D +++R + A + P + + +S G LL
Sbjct: 111 ASHVLFAVTDRVPL--APLRQRAERALADVVAAPDTFEAVARESSNCPSAQVGGSLGQLL 168
Query: 239 ESDLHPQFQNLLKKSQN--NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTK 296
D P+F+ L + T+ G + I +R + G++ + Q
Sbjct: 169 RGDTVPEFEAALFDTDGLGVLPKLVDTRFGFHIVRI--ERRIPGDVVPFDEAAGQIAA-- 224
Query: 297 IEKHEAEYVKK-LRSNAIIHY 316
Y+ + +R A+ Y
Sbjct: 225 -------YLSERVRQRAMRQY 238
>gi|310643607|ref|YP_003948365.1| trigger factor [Paenibacillus polymyxa SC2]
gi|309248557|gb|ADO58124.1| Trigger factor [Paenibacillus polymyxa SC2]
Length = 437
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + EK L++E Q + I +N A S E+ S L+
Sbjct: 347 QMKADAEKRVRNNLVLE----QVAKAENIEVSEAEINEELQNMADTYKRSVEEIRSILES 402
Query: 127 QGIGDNHFKQYLA 139
G + K+ ++
Sbjct: 403 NG-SFANLKEEIS 414
>gi|22124961|ref|NP_668384.1| potassium efflux protein KefA [Yersinia pestis KIM 10]
gi|149365025|ref|ZP_01887060.1| putative potassium efflux system [Yersinia pestis CA88-4125]
gi|161511425|ref|NP_992190.2| potassium efflux protein KefA [Yersinia pestis biovar Microtus str.
91001]
gi|162139444|ref|YP_646893.2| potassium efflux protein KefA [Yersinia pestis Nepal516]
gi|167469127|ref|ZP_02333831.1| potassium efflux protein KefA [Yersinia pestis FV-1]
gi|218930159|ref|YP_002348034.1| potassium efflux protein KefA [Yersinia pestis CO92]
gi|21957803|gb|AAM84635.1|AE013709_4 putative alpha helix protein [Yersinia pestis KIM 10]
gi|115348770|emb|CAL21724.1| putative potassium efflux system [Yersinia pestis CO92]
gi|149291438|gb|EDM41512.1| putative potassium efflux system [Yersinia pestis CA88-4125]
Length = 1139
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 19/191 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F + + T ++++ + A +S I + T ++ ++ LL
Sbjct: 9 LFDPFLFCRQTMFTLVIIVLLLFSSTFVFGISAFASGINVDVP----TRSEVQSQLDLLS 64
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
QKI EK+A Q+L IE++ A + L
Sbjct: 65 KQKILSPAEKLAQQDLTQTLEYLDTIERTKQE-------------ANQLKQQLAQAPAKL 111
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G K A + L + + ++++ Y + +
Sbjct: 112 RQATEGLEALKSSSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSA--YNSQLIA 169
Query: 185 FSIPDNKLQNQ 195
++Q+
Sbjct: 170 LQTQPERVQSA 180
>gi|327184064|gb|AEA32511.1| peptidylprolyl isomerase [Lactobacillus amylovorus GRL 1118]
Length = 301
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 84/269 (31%), Gaps = 40/269 (14%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 41 ITQQQYYDEMKKSQAGKSTLA-NMIINRALEQQ----YGKYVSSKKVDKQYNNYKKQYG- 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FK+ L + E + K+ K
Sbjct: 95 --SQFSAVLQQNGMTASSFKENLKTNLL---------------SEQALKHIKKISKKQEQ 137
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+ + P +Q+ +K + +L+ K L K S D +
Sbjct: 138 QVWKSYQ-----PKVTVQHILVAKKSTAQSIIKQLKDGKSFKSLAKKYS--LDTATKNKA 190
Query: 236 YLLES------DLHPQFQN-LLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAY 287
L + L F+ K T P +Q G I + G K
Sbjct: 191 GKLPAFDSTDNTLDSSFKTAAFKLKTGEVTSTPVKSQSGYHVIKMISHPAKGKFADHKKT 250
Query: 288 LSAQNTP--TKIEKHEAEYVKKLRSNAII 314
+ + + + + + + A +
Sbjct: 251 IDDEIYASMAQDQATMKDVISTVLKRADV 279
>gi|312864307|ref|ZP_07724541.1| putative foldase protein PrsA [Streptococcus vestibularis F0396]
gi|322517304|ref|ZP_08070180.1| peptidylprolyl isomerase [Streptococcus vestibularis ATCC 49124]
gi|311100308|gb|EFQ58517.1| putative foldase protein PrsA [Streptococcus vestibularis F0396]
gi|322124087|gb|EFX95637.1| peptidylprolyl isomerase [Streptococcus vestibularis ATCC 49124]
Length = 380
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 13/124 (10%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
++ VS + ++ G+ +T GD+ L+ N
Sbjct: 77 VAVSALVGAGAMYVSLGNKTTEETTLVSMKGDTVTVGDV-----FDSLKGSN-----QTQ 126
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
Q ++ TL+K ++ G V+ + + G + FS L G + ++
Sbjct: 127 QSVLSATLQKALEKEYGSKVSKEDVDKAYKKSLEQYG---DQFSQVLAAYGQTEESYRTQ 183
Query: 138 LAIQ 141
+ Q
Sbjct: 184 IRTQ 187
>gi|220928200|ref|YP_002505109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulolyticum H10]
gi|219998528|gb|ACL75129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulolyticum H10]
Length = 347
Score = 40.0 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 82/252 (32%), Gaps = 15/252 (5%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG----LSAEDFSS 122
K + +KIA+ ++ ++ + + + IT N ++ F + + +
Sbjct: 82 KASEYAKKIALDNIVDFKIQLSKAKDAKITLTKNEMDEFNGNMNSYLNSLASTTKDQENI 141
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
++ G FK + I + K+ + E+ KN+ + +
Sbjct: 142 IKNETGFTLAQFKSFYNNVYIVRKFAS-ETQKKFNCTDTELKKYYNSNKNLFYKVVVGHI 200
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYL 237
+ + +N + K AEE+ L++ + ++ + + GK +
Sbjct: 201 LFLTTDENNQSTPKKEAEAKKKAEETLLKINSPNSDFAALVKELSEDPGSKETGGKYTVM 260
Query: 238 LESDLHPQFQNLLKKSQNNT--TNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQN 292
+ P+FQN T T G + + L +I + +
Sbjct: 261 NNNQFVPEFQNWAVNPSRKVGDTGIIKTSYGFHVMKLMKIYSFNQLKSDIKSSYIIKKYD 320
Query: 293 TPTKIEKHEAEY 304
+ + +Y
Sbjct: 321 DNLSAWRKDKKY 332
>gi|323157884|gb|EFZ43987.1| chaperone surA domain protein [Escherichia coli EPECa14]
Length = 64
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN-TPTKIEKHEAEYVKKLRSNA 312
+ P + G I + D R++ A + + + K + A ++++ R++A
Sbjct: 1 MSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASA 57
>gi|304413823|ref|ZP_07395240.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Candidatus
Regiella insecticola LSR1]
gi|304283543|gb|EFL91938.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Candidatus
Regiella insecticola LSR1]
Length = 623
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 19/111 (17%)
Query: 43 RTTINGEVITDGDISK-----RIALLKLQKIN-----------GELEKIAVQELIVETLK 86
+NGE I+ + + R + + +L + +++LI L
Sbjct: 41 AAKVNGEKISQAKLEQAFQSERARMQQQLGEQFSTLASNESYMSKLRQQTLEQLINNVLL 100
Query: 87 KQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHF 134
Q +K G+T V Q + + + ++ G + F
Sbjct: 101 NQYTQKLGLTVSDEQVKESIRQIPYFQTDNKFDNTKYLNLINSMGYKPDQF 151
>gi|83310913|ref|YP_421177.1| parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magneticum AMB-1]
gi|82945754|dbj|BAE50618.1| Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magneticum AMB-1]
Length = 623
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 6/149 (4%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
++ + + Y R FS P+ + +Q + A L L
Sbjct: 240 SDVAGGIDIDEEMVRDAYRQRIEEFSTPERRAVSQIVFDE--SSAAAKATDLVTGGKDLA 297
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
A ++ I + ++DL + K S T+ P T G + + +
Sbjct: 298 TIAKALNSEII-DLGVIEKNDLPEGLAEAVFKLSSGATSQPVKTALGWHVVKVSQIQP-- 354
Query: 280 GEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
G + AQ ++ + + +L
Sbjct: 355 GRTRSFDEVKAQLEQDMRKEKATDGLSEL 383
>gi|330859944|emb|CBX70273.1| peptidyl-prolyl cis-trans isomerase D [Yersinia enterocolitica
W22703]
Length = 628
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDGKFDNNKYLELVNRMGYTPDQF 152
>gi|17229421|ref|NP_485969.1| hypothetical protein alr1929 [Nostoc sp. PCC 7120]
gi|17131019|dbj|BAB73628.1| alr1929 [Nostoc sp. PCC 7120]
Length = 282
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 38/231 (16%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFL 124
++ LE IA Q++I +T EK GI + + A L A+D ++L
Sbjct: 45 QMPSILEAIATQKIIADT-----AEKVGIELSVEELQQSADSMRFANRL-LKADDTWNWL 98
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR--- 181
K + + F++ + + ++ F +E A+K E ++
Sbjct: 99 QKHYLTIDDFEEVAKSNLLHMKLAEHLF---ADKVEPFFYAHKIDYTGAATYEVILDDED 155
Query: 182 ---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ +++ + ++ Q ++ I+ E R + G
Sbjct: 156 LALELFYALQEGEISFQEIARQYIQSPETRR--------------------AGGYQGIRY 195
Query: 239 ESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
S+ P+ + + P +T KGV IA+ + + + + +
Sbjct: 196 RSEFRPEIAAAVFAATPPQLLKPIITPKGVHIIAVEEIITPELDESRRVQI 246
>gi|172037109|ref|YP_001803610.1| hypothetical protein cce_2194 [Cyanothece sp. ATCC 51142]
gi|171698563|gb|ACB51544.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142]
Length = 251
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 71/234 (30%), Gaps = 43/234 (18%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L + + +I E + EI ++ FF Q ++ E +L KQG+
Sbjct: 27 LSSLVRELIIDEAIAYIEIAS---DRTKQALDQFFEQ---QKLITPEQKQQWLQKQGLTQ 80
Query: 132 NHF-KQYLAI-------QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
+Q + Q W ++ F+ + L+ + + + K + RE
Sbjct: 81 TQLNRQIIRQCKIEQFKQITWGHKLEAYFLQRKSQLDQVMYSLLRINKAMVARELYF--- 137
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK-FASKIHDVSIGKAQYLLESDL 242
RI++ E +D ++ + ++ + G + S
Sbjct: 138 -----------------RIQEEE-------QDFAEVARCYSQGPEAQTGGLIGPVALSSP 173
Query: 243 HPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
HP LL + + + + A++ L +
Sbjct: 174 HPTLAKLLTRHKPGQLLPLTRIENWFVIVRLEKYLPAQLNDAMEKRLLNELFNQ 227
>gi|51595337|ref|YP_069528.1| potassium efflux protein KefA [Yersinia pseudotuberculosis IP
32953]
gi|51588619|emb|CAH20227.1| MscS family mechanosensitive channel [Yersinia pseudotuberculosis
IP 32953]
Length = 1139
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 19/191 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F + + T ++++ + A +S I + T ++ ++ LL
Sbjct: 9 LFDPFLFCRQTMFTLVIIVLLLFSSTFVFGISAFASGINVDVP----TRSEVQSQLDLLS 64
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
QKI EK+A Q+L IE++ A + L
Sbjct: 65 KQKILSPAEKLAQQDLTQTLEYLDTIERTKQE-------------ANQLKQQLAQAPAKL 111
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G K A + L + + ++++ Y + +
Sbjct: 112 RQATEGLEALKSSSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSA--YNSQLIA 169
Query: 185 FSIPDNKLQNQ 195
++Q+
Sbjct: 170 LQTQPERVQSA 180
>gi|168049559|ref|XP_001777230.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671458|gb|EDQ58010.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 6/60 (10%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+++ G + + FQ + + P+ + G I +++
Sbjct: 85 AAEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPPGVLSAPFKSTHGYHIILAEGRKN 144
>gi|329117232|ref|ZP_08245949.1| putative foldase protein PrsA [Streptococcus parauberis NCFD 2020]
gi|326907637|gb|EGE54551.1| putative foldase protein PrsA [Streptococcus parauberis NCFD 2020]
Length = 314
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
+ ++ + + S ++++ + G+ IT D + + A Q ++
Sbjct: 13 TLASVMTLAACNSTNDNTKLVSM-KGDTITVTD----------FYNEAKTTQAAQQSMLS 61
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L + + G V + + A G S FS L + G+ +K+ +
Sbjct: 62 LILSRVFEGQYGKKVSDKEVEKSYNKTAEQYGAS---FSEALSQAGMTTETYKKQIRTTM 118
Query: 143 I 143
+
Sbjct: 119 L 119
>gi|332160753|ref|YP_004297330.1| peptidyl-prolyl cis-trans isomerase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664983|gb|ADZ41627.1| peptidyl-prolyl cis-trans isomerase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 628
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDGKFDNNKYLELVNRMGYTPDQF 152
>gi|299148146|ref|ZP_07041208.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_23]
gi|298512907|gb|EFI36794.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_23]
Length = 516
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 35/314 (11%), Positives = 96/314 (30%), Gaps = 73/314 (23%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG I +
Sbjct: 7 LLLGCI-SLFVVAVFAQEDPVLMRVNGREILRSEF------------------------- 40
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S S + + L E G+ F++
Sbjct: 41 -EYAYRRYAERSNARLSSKE----YAALFAQSKLKVE----AARAAGLDTTSIFRKQ--Q 89
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++V++ +++ ++ A QKM + + +P +
Sbjct: 90 EKCRTELVES-YLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQT-------IT 141
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS------ 253
R + E++R+ + + + D++ + + D ++ L+ +
Sbjct: 142 SRHLEEEKTRM------DSIYRMIQNQPDLNFNRLVEIYSDDKQSRWIECLETTSEFENV 195
Query: 254 -----QNNTTNPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEK 299
+ + P+ T +G+ + + D+ + E + + + T +E+
Sbjct: 196 AFSLAKGMASQPFFTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLER 255
Query: 300 HEAEYVKKLRSNAI 313
+ + A+
Sbjct: 256 LKKAWQYAPNQAAM 269
>gi|15837793|ref|NP_298481.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c]
gi|9106161|gb|AAF84001.1|AE003953_5 peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c]
Length = 655
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 52/173 (30%), Gaps = 12/173 (6%)
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + E + + + + +L + + + K K EE
Sbjct: 258 AAHLPRPTPSEAVLRKRYDAQQRGEAQNEQRKAAHILITAGADAASQKVAEAKAAKLVEE 317
Query: 208 SRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQ 264
+R + D L + S+ + G ++ + F+++L P T+
Sbjct: 318 AR-KPGVDFAALARINSQDPGSKDAGGDLGWVQRGMMVKPFEDVLFAMKVGEVVGPIKTE 376
Query: 265 KGVEYIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + + + L A + ++ + + + L N
Sbjct: 377 FGNHVIKLEEIKAAKQLPFEAVRDQLAAEQTKEDIDKEFNDVTGKLMDLLVKN 429
>gi|307545440|ref|YP_003897919.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata
DSM 2581]
gi|307217464|emb|CBV42734.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Halomonas elongata
DSM 2581]
Length = 270
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 4/133 (3%)
Query: 176 REYLIRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
+R VL + PD+ ++ + E+ + ++ ++ G+
Sbjct: 113 TRLEVRHVLLAAAPDDAEARDAGYRQGRRLIEQLTEHPERFTELAQRHSACPSKDQGGEL 172
Query: 235 QYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+L P+ L+ + P ++ G + I D+R G E A + + +
Sbjct: 173 GWLQPGQTVPELDRALQHLPVGLHDRPLASRYGWHVVVI-DRRVEGREPAFERVV-DRVR 230
Query: 294 PTKIEKHEAEYVK 306
E+ ++
Sbjct: 231 HCLREQASRRALR 243
>gi|262278967|ref|ZP_06056752.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus
RUH2202]
gi|262259318|gb|EEY78051.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter calcoaceticus
RUH2202]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +LI+F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
L + G+ ++ A+ L+ L Q+ EK GI+ + Q
Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDTQIEQMLAQ 118
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 35/116 (30%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E + K + ++ + + I +++ ++++ +
Sbjct: 245 TEAELQQAYSKFVETQKKDAKRTVKHILITTDARDDAAAQKLAKEVYAKIQGGLTFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D S L+E+ F + K+ + P TQ G I
Sbjct: 305 SQFSE--DPSSKAKGGLVEAYAPGVFSDAFDKTVVSLKNGQISQPVKTQYGYHIIE 358
>gi|56476305|ref|YP_157894.1| rotamase [Aromatoleum aromaticum EbN1]
gi|56312348|emb|CAI06993.1| probable rotamase [Aromatoleum aromaticum EbN1]
Length = 256
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 65/223 (29%), Gaps = 10/223 (4%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAIQSIWPDV 147
E ++ + + F Q LS E + LD + + A Q +
Sbjct: 3 EQGRAELMASEKRLRDFVAQLFAVRKLSDEARARTLDAGERWKIDASMERAAAQVQLDHL 62
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI-KDAE 206
V + + E + + + + VL + + K++ A
Sbjct: 63 VNGQELPDFDKAAREFYVAHP-EQFVQPEQVHAQHVLIKSEGRSKEEALVLAKQVVAQAN 121
Query: 207 ESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQ 264
+ K + + S + G + + F++ + KS P +Q
Sbjct: 122 KDSQDFGKLAAEFTEDPSG--KANGGDLGFFARGSMVKPFEDAIFGLKSPGEIVGPVESQ 179
Query: 265 KGVEYIAICDKR---DLGGEIALKAYLSAQNTPTKIEKHEAEY 304
G I + +++ + + + + + EY
Sbjct: 180 FGFHVIRLVERKAETTIPFDEVKDKLVRDETLKYRRMAIGKEY 222
>gi|226942334|ref|YP_002797407.1| nitrogen fixation cis-trans peptidyl prolyl isomerase, NifM
[Azotobacter vinelandii DJ]
gi|226717261|gb|ACO76432.1| Nitrogen fixation cis-trans peptidyl prolyl isomerase, NifM
[Azotobacter vinelandii DJ]
Length = 293
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 81/232 (34%), Gaps = 11/232 (4%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK--N 150
G+ + + + A S E LD Q + + LA + V+
Sbjct: 59 IGVVIPPSQLEEAWAHIASRYE-SPEALQQALDAQALDAAGMRAMLARELRVEAVLDCVC 117
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA--EES 208
+ + + ++ + + ++ R +L +I ++ +N + + +
Sbjct: 118 AGLPEISDTDVSLYYFNHAEQFKVPAQHKARHILVTINEDFPENTREAARTRIETILKRL 177
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGV 267
R + + + K + + G ++ L+P+ L + ++ + + G
Sbjct: 178 RGKPERFAEQAMKHSECPTAMQGGLLGEVVPGTLYPELDACLFQMARGELSPVLESPIGF 237
Query: 268 EYIA---ICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK-LRSNAIIH 315
+ + R L E L L + + + ++ ++++ L+ NA +
Sbjct: 238 HVLYCESVSPARQLTLEEILPR-LRDRLQLRQRKAYQRKWLESLLQQNATLE 288
>gi|318604634|emb|CBY26132.1| peptidyl-prolyl cis-trans isomerase ppiD [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 628
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 25/145 (17%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK--RIALLKLQ 66
L + L+ F+L I +A +NG+ I+ + + + +LQ
Sbjct: 14 LKIILALIMLSFILTGVGSYLIGGSNDFA------AKVNGQEISRAQLEQAVQSERSRLQ 67
Query: 67 KINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---H 109
+ GE L + + +L+ L Q +K G+T V Q
Sbjct: 68 QQLGEQFSALAANEGYMLQLRQQVLGQLVNNMLLDQYAKKLGLTASDEQVKDAIRQAPYF 127
Query: 110 ARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + +++ G + F
Sbjct: 128 QTDGKFDNNKYLELVNRMGYTPDQF 152
>gi|197117512|ref|YP_002137939.1| hypothetical protein Gbem_1123 [Geobacter bemidjiensis Bem]
gi|197086872|gb|ACH38143.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 613
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 54/289 (18%)
Query: 31 VSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIA--------VQELIV 82
S ++N E IT GD+ K AL+ L + E ++++ ++ LI
Sbjct: 85 APLYSPLFFDVPLASVNDEKITLGDLQK--ALMSLHEKMTEEKEVSAKKNFMEPLERLIN 142
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
L QE + + + + + A L K +
Sbjct: 143 VKLVVQEAKNMELD-RQDEIKSNLEKFADQ------QLRQVL-----FLERVKD-IKPD- 188
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ +Y + E+ K TV + I + ++L+++ +
Sbjct: 189 ------ERKVQKEYRDTIKEMKLKSLIFKKDTVAKAFIEELKHGKKFDELRDKALKDGKA 242
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
+ A + + + ++ + DV +
Sbjct: 243 ETAGQDEQQYATNAALGPVVSAGLADV-----------------------KAGGISPIIE 279
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G + + R + L+ S + K++ Y +L
Sbjct: 280 IMNGFLVAKVEEIRYVDNPAGLEQARSKVLSQMKLDSL-KAYKAELVKK 327
>gi|85708717|ref|ZP_01039783.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1]
gi|85690251|gb|EAQ30254.1| peptidyl-prolyl isomerase [Erythrobacter sp. NAP1]
Length = 645
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 20/164 (12%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA------- 61
L FI L + + + + GE IT ++S +
Sbjct: 15 LPIFIGFLVLVALAFAASDISGSATFGGLTGDDKVAVVGGEPITSNEMSGAMNNALDRAR 74
Query: 62 -------LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+ +L +G + ++ LI Q ++ G+ N VN +Q
Sbjct: 75 DQNPTITMPQLVANDGLNRE--LELLIDRFAIGQFAQEYGLRAGENLVNSEILQIGAFRN 132
Query: 115 LSAE----DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
++ E + + L +QGI D ++ +A + +++ F
Sbjct: 133 VTGEFDQATYQAALRRQGITDAILRKDIADGLLAQQLLRPAFAA 176
>gi|303257438|ref|ZP_07343451.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Burkholderiales bacterium 1_1_47]
gi|302859795|gb|EFL82873.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Burkholderiales bacterium 1_1_47]
Length = 261
Score = 40.0 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 90/293 (30%), Gaps = 47/293 (16%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ--KINGELEKIAVQELIVET 84
+ ++ A ++ T+NG+ ++ + + + L+ +LE A L+ +
Sbjct: 2 LAAALAGVLPAAVAQTAFTVNGQFVSVEEQKQLMDFLRANGVTNEKQLENAARSILLEQK 61
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIW 144
+ +Q G+ D +S + Q +
Sbjct: 62 IIEQAARNEGLLEDPR----------VRVLISEKQ--------------------AQL-Y 90
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
++ + ++ E ++ + + E R +L P+ +Q
Sbjct: 91 GSILSRRYASEHPITEEQVRNRYDSLLSSYDPHEIKFRHILVKTPEEAR---EIIQSLKV 147
Query: 204 DAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PY 261
++ L + ++ I +I + + +L + P+
Sbjct: 148 GSDFGSLAKERSLDQSTSQNGGQIPFTNIRNVL------VPGLAEAILALQPGDLLPVPF 201
Query: 262 VTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
++ G + + +KR++ + + E++ L+ +A I
Sbjct: 202 KSKLGYHVVLLEEKREVP--FPSYEEVKPKVLSELERLQTTEFLNDLQKDAKI 252
>gi|325479410|gb|EGC82506.1| putative peptidylprolyl isomerase PrsA1 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 248
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 88/270 (32%), Gaps = 42/270 (15%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSN 100
++ +NG+ I D+ K +A ++ + ++ L E + QEI +
Sbjct: 6 KLLAEVNGKKIYTQDVYKLMA--NMEDGQRFNNEEGIKVLCDEIV-NQEI------LLKD 56
Query: 101 TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
V+ + DF L+ + DN K Y + +K + E
Sbjct: 57 AVDKKLDE--------ETDFVKELEA--VKDNMLKNYAMHKIF--------EEIKLDDSE 98
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
++ K K Y +L + K K+ EE + +
Sbjct: 99 IKAYYEKNKENLNPPLLYEASHILVK-------DLEEASKIKKEIEEG----LEFSEAAK 147
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
K++ + G + + +FQ L + + P +Q G I + + ++
Sbjct: 148 KYSIDPSKDNGGSLGKFPKGVMVKEFQEGLDSIEVGQISEPVKSQFGYHLIKLENIENV- 206
Query: 280 GEIALKAYLSAQNTPTKIE-KHEAEYVKKL 308
E + Q + K + Y+ KL
Sbjct: 207 -ETPSYDEIKDQVKQRVLMIKRQEAYLNKL 235
>gi|260219734|emb|CBA26579.1| hypothetical protein Csp_E36670 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 587
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 70/222 (31%), Gaps = 29/222 (13%)
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
S I ++ +F +S L + N +Y+ + + VK
Sbjct: 205 SKINPSDADIDAYF------------QANSALFQSTETANV--EYVVLDL---EAVKKTV 247
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR- 211
+ +L+ N ++ E +L + P + K A +++R
Sbjct: 248 SVNEADLKSYFEQNASRLSAKE--ERRASHILINAPKDMPAADRAKAKERATALLAQVRK 305
Query: 212 LPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVE 268
P ++ K S+ + G + + F++ + ++ + G
Sbjct: 306 APDSFAEVAKKNSQDVGSAPRGGDLDFFGRGAMVKPFEDAAFSMKKGEISDLVESDFGFH 365
Query: 269 YIAICDKRDLG------GEIALKAYLSAQNTPTKIEKHEAEY 304
I + D + ++L+ L AQ+ K + +
Sbjct: 366 IIKLADVKGAKQPTFEEARVSLEPELRAQSAQRKFAEVAEAF 407
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 19/160 (11%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQK 67
+ + L ++ F +V + YKS A T+ IT + D + + + +L+
Sbjct: 9 TKVLMFLMFLLIIPAFVLVGVDGYKSMAGGGATVATVGNAKITQEEWDFAHKNEVDRLRA 68
Query: 68 I----------NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG 114
+ E ++ L+ E + + ++ + +T + + Q A
Sbjct: 69 SVPNLDPKLLDSAEARYTTLERLVREKVMAEAVQTAHMTTSNARLARELQQNPTIASLRK 128
Query: 115 ----LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
L E + QG+ F+ + V
Sbjct: 129 PDGTLDMERYRQLAASQGLTPEGFEARVRRDLSLMQVESA 168
>gi|167628596|ref|YP_001679095.1| trigger factor [Heliobacterium modesticaldum Ice1]
gi|167591336|gb|ABZ83084.1| trigger factor [Heliobacterium modesticaldum Ice1]
Length = 461
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+ LK Q I E EK+ +EL++E + + G++ +N + A N
Sbjct: 368 KQTQKDLKAQFIP-EAEKVVKEELVLEAV----AKAEGMSVSDEELNKEIEEMAANYRKP 422
Query: 117 AEDFSSFLDKQG 128
A+ L+ +G
Sbjct: 423 ADQIRKILESRG 434
>gi|15641920|ref|NP_231552.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121591616|ref|ZP_01678864.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 2740-80]
gi|121727851|ref|ZP_01680918.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae V52]
gi|147674490|ref|YP_001217451.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae O395]
gi|153820108|ref|ZP_01972775.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae NCTC 8457]
gi|153823840|ref|ZP_01976507.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae B33]
gi|227082048|ref|YP_002810599.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae M66-2]
gi|229507986|ref|ZP_04397491.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae BX
330286]
gi|229511777|ref|ZP_04401256.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae B33]
gi|229518914|ref|ZP_04408357.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC9]
gi|229607532|ref|YP_002878180.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae MJ-1236]
gi|254849006|ref|ZP_05238356.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MO10]
gi|255745323|ref|ZP_05419272.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholera CIRS 101]
gi|262156047|ref|ZP_06029167.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae INDRE
91/1]
gi|262167880|ref|ZP_06035580.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC27]
gi|298498044|ref|ZP_07007851.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae MAK 757]
gi|9656453|gb|AAF95066.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121546529|gb|EAX56737.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 2740-80]
gi|121629887|gb|EAX62301.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae V52]
gi|126509350|gb|EAZ71944.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae NCTC 8457]
gi|126518637|gb|EAZ75860.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae B33]
gi|146316373|gb|ABQ20912.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae O395]
gi|227009936|gb|ACP06148.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae M66-2]
gi|227013816|gb|ACP10026.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae O395]
gi|229343603|gb|EEO08578.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC9]
gi|229351742|gb|EEO16683.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae B33]
gi|229355491|gb|EEO20412.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae BX
330286]
gi|229370187|gb|ACQ60610.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae MJ-1236]
gi|254844711|gb|EET23125.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MO10]
gi|255737153|gb|EET92549.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholera CIRS 101]
gi|262023607|gb|EEY42308.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae RC27]
gi|262030225|gb|EEY48869.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae INDRE
91/1]
gi|297542377|gb|EFH78427.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae MAK 757]
Length = 619
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIDQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK--KLRSNA 312
+ + + + + + ++ Y K +L A
Sbjct: 363 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|260172003|ref|ZP_05758415.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2]
gi|315920316|ref|ZP_07916556.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2]
gi|313694191|gb|EFS31026.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D2]
Length = 515
Score = 40.0 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 34/314 (10%), Positives = 95/314 (30%), Gaps = 73/314 (23%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG I +
Sbjct: 6 LLLGCI-SLFVVAVFAQEDPVLMRVNGREILRSEF------------------------- 39
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S S + + L E G+ F++
Sbjct: 40 -EYAYRRYAERSNARLSSKE----YAALFAQSKLKVE----AARAAGLDTTSVFRKQ--Q 88
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++V++ +++ ++ A QKM + + +P +
Sbjct: 89 EKCRTELVES-YLIDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQT-------IT 140
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS------ 253
R + E++R+ + + + D++ + + D ++ L+ +
Sbjct: 141 SRHLEEEKTRM------DSIYRMIQNQPDLNFNRLVEIYSDDKQSRWIECLETTSEFENV 194
Query: 254 -----QNNTTNPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEK 299
+ + P+ T +G+ + + D+ + E + + + +E+
Sbjct: 195 AFSLAKGMASQPFFTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGAGAVLER 254
Query: 300 HEAEYVKKLRSNAI 313
+ + A+
Sbjct: 255 LKKAWQYAPNQAAM 268
>gi|212709201|ref|ZP_03317329.1| hypothetical protein PROVALCAL_00234 [Providencia alcalifaciens DSM
30120]
gi|212688113|gb|EEB47641.1| hypothetical protein PROVALCAL_00234 [Providencia alcalifaciens DSM
30120]
Length = 622
Score = 40.0 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 26/198 (13%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK-----RIALLK 64
S FIK+L +L ++ V+ SS +NG+ I+ + + R +L +
Sbjct: 11 SPFIKVLLAIIILSF--VLTGVAGYVIGGSSNNAAEVNGQPISKEQLQQAFQQERQSLQE 68
Query: 65 LQKIN-----------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY---FFVQHA 110
EL A+ LI L Q + ++ +
Sbjct: 69 YLGDKFSEVASNDNYMKELRTQALNNLINNQLINQYANELQLSASDQQIEQAIFAMQIFQ 128
Query: 111 RNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
N +E + L + I ++F + D+V+ + E +P+ +
Sbjct: 129 TNGKFDSEKYREILSRYNINADNFAAQIR-----QDLVRAQLGKSFTGTEFALPSEVKAY 183
Query: 171 KNITVREYLIRTVLFSIP 188
+ ++E +RT S+
Sbjct: 184 AELFMQEREVRTATLSLA 201
>gi|206890921|ref|YP_002247897.1| hypothetical protein THEYE_A0043 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742859|gb|ACI21916.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 196
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 13/158 (8%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT------DGDISK 58
+ +L K F L+I V ++G+ I+ + + +
Sbjct: 1 MIKTLRKNAKYFYFLFFLVIITFVFWGVGTVDKPKVEYVADVDGQKISAERFWRNYEEIR 60
Query: 59 R----IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HAR 111
R + K ++ L++ +++LI E + +K I V V R
Sbjct: 61 RFYREVFKDKAAEMEQGLKEKVLEDLINEEILLWLAKKYEIEATDKEVQDAIVNDPRFMR 120
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
N + + L + ++ L + ++
Sbjct: 121 NGIFQRDIYFQILKLNRLNPAQYEASLKREITIGKTIQ 158
>gi|315038920|ref|YP_004032488.1| peptidylprolyl isomerase [Lactobacillus amylovorus GRL 1112]
gi|325957341|ref|YP_004292753.1| peptidylprolyl isomerase [Lactobacillus acidophilus 30SC]
gi|312277053|gb|ADQ59693.1| peptidylprolyl isomerase [Lactobacillus amylovorus GRL 1112]
gi|325333906|gb|ADZ07814.1| peptidylprolyl isomerase [Lactobacillus acidophilus 30SC]
Length = 301
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 24/261 (9%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
I+++ +++K +A +I L++Q G S V+ + + + G
Sbjct: 41 ITQQQYYDEMKKSQAGKSTLA-NMIINRALEQQ----YGKYVSSKKVDKQYNNYKKQYG- 94
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
FS+ L + G+ + FK+ L + +K +K + + E A K +T
Sbjct: 95 --SQFSAVLQQNGMTASSFKENLKTNLLSEQALK---HIKKISKKQEQQAWKSYQPKVT- 148
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
++ +L + K + K++KD + + K +
Sbjct: 149 ----VQHILVA----KKSTAQSIIKQLKDGKSFKSLAKKYSLDTATKNKAGKLPAFDSTD 200
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP- 294
L+S L K+ T+ P +Q G I + G K + +
Sbjct: 201 NTLDSSFKTAAFKL--KTGEVTSTPVKSQSGYHVIKMISHPAKGKFADHKKAIDDEIYAS 258
Query: 295 -TKIEKHEAEYVKKLRSNAII 314
+ + + + + A +
Sbjct: 259 MAQDQATMKDVISTVLKRADV 279
>gi|261380078|ref|ZP_05984651.1| conserved hypothetical protein [Neisseria subflava NJ9703]
gi|284797294|gb|EFC52641.1| conserved hypothetical protein [Neisseria subflava NJ9703]
Length = 290
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 96/302 (31%), Gaps = 33/302 (10%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING----ELEKIAVQEL 80
F +++ S + ++ T+NG+ I I ++A ++ N EL ++ +
Sbjct: 6 FASALMLALTSSTLLAQTLVTVNGQAIDSSVIDDQVASVRASNPNVKDTPELRQMLTERQ 65
Query: 81 IVETLKKQEIEKSGITFDSN---TVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
++ T+ QE +K + + + A+ F + F+
Sbjct: 66 VISTVVTQEAKKLKLDQSAEFKTALEQARADAAKQGADKKATFKTEWAV-------FEND 118
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
L Q+ +V+ + E ++ A N +E + ++ N +
Sbjct: 119 LLGQAFAAHIVRQN-----PIQEKDVKAAYNDFSNFYKGTQEVQLGEIVTDSSSNAQKAI 173
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ + ++ K A I + L+ P + + +
Sbjct: 174 ADLDAKKSFVSVLN---QYSIDEAAKKAGGIPKAYV--PLKDLQESAPPLYAAVKDLKKG 228
Query: 256 -NTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+T P + D+R++ A K + +++ ++ L A
Sbjct: 229 AHTKTPLQNGNLYAVFYVNDRRNVTVPSYEASKNEIGNDLQAARVDAA----IQSLLKKA 284
Query: 313 II 314
I
Sbjct: 285 SI 286
>gi|146339260|ref|YP_001204308.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278]
gi|146192066|emb|CAL76071.1| putative peptidylprolyl isomerase [Bradyrhizobium sp. ORS278]
Length = 341
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 6/142 (4%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI---G 232
R + I +L ++ ++ + K+ + +L+ P AS + G
Sbjct: 177 RRFRIAQILVALANDADKAAEDAAKKKLEDVVRKLKQPGTDFAALARASSDETATAEKDG 236
Query: 233 KAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL--KAYLS 289
+ ++ E +L + ++ + ++ T+P G + + D K L
Sbjct: 237 EIGWVPEPNLRGEIRSQVAGLAKGGVTDPIRLDDGWHVVKLLDTDASTTRPLAEVKDVLI 296
Query: 290 AQNTPTKIEKHEAEYVKKLRSN 311
+ + + + YV +L
Sbjct: 297 QRLRAERADANRRAYVAELVKQ 318
>gi|115360188|ref|YP_777326.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
gi|115285476|gb|ABI90992.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria AMMD]
Length = 245
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 74/283 (26%), Gaps = 55/283 (19%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NG IT + + + L K L +LI L +Q K V
Sbjct: 4 VNGVPITQAQVDEAVRLSKAPDTPA-LRAALKNQLIARELFRQAALKQHYDTKPQVV--A 60
Query: 106 FVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
V+ A+ ++ + + + VK +
Sbjct: 61 AVEQAKALAMTQAYL--------------RDQVKPVPVTDADVKARYDAIV--------- 97
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
T+ E + + ++ D Q + R + +F+
Sbjct: 98 -------ATLGENEYKPSVIAVNDADTAKQIIARLRKGE---------DFGALAREFSKG 141
Query: 226 IHDVSIGKAQYLL---------ESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAICD 274
G ++ + Q L+K Q T P + D
Sbjct: 142 PSAAQSGALNWISFKTPIEAGHTQNWPQQLAEALVKLPQGGLTREPVQIGDMYWIVRADD 201
Query: 275 KRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
KR K L Q +EK A+ V L NA I
Sbjct: 202 KRQTQVPTFDQAKDTLRQQLEQVAVEKATAQVVADLIRNARIQ 244
>gi|320546403|ref|ZP_08040718.1| peptidyl-prolyl cis-trans isomerase [Streptococcus equinus ATCC
9812]
gi|320448788|gb|EFW89516.1| peptidyl-prolyl cis-trans isomerase [Streptococcus equinus ATCC
9812]
Length = 353
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
S K ++ + + ++ T+ G IT D K +
Sbjct: 15 SKAFKGVSIAVASALIGAGVTYLATNSNSETKALVTMKGNTITVSD------FYSAAKSS 68
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++ + LI+ + + + G V + + A + G S SS L G+
Sbjct: 69 TSSQQTMLN-LILARVFED---QYGSKVSDKEVTEAYNKTASSYGSSF---SSALQAAGL 121
Query: 130 GDNHFKQYLAIQSI 143
+ +KQ + +
Sbjct: 122 TTDTYKQQIRTSML 135
>gi|294666558|ref|ZP_06731799.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603702|gb|EFF47112.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 656
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 21/168 (12%)
Query: 51 ITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKSGITF 97
I+ D R ++Q+ + EK + +L+ E + + E +GI
Sbjct: 70 ISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVI 129
Query: 98 DSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQY--LAIQSIWPDVVKNDF 152
TV + + S + + + L + G Q+ L S+ V+
Sbjct: 130 GDATVRDYIANIPAFQVDGKFSPDQYRAALAQ-GTPPRTPAQFDALVRDSLQQSVIPQAV 188
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ E + M R+ + + D + +++
Sbjct: 189 AESGFATKSEFERLLKLM--GETRDVELAMLPPPAADTAPVSDAQIKQ 234
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 6/141 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K + + + L +L S + + K K A E++ D L K S+
Sbjct: 277 EDEKARFVEPEQRLASHILISAGPDAAAQKAAEAKAAKLAAEAKQT-GTDFAALAKANSQ 335
Query: 226 IHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + + F++ L P ++ G I + + + G+
Sbjct: 336 DPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQGKS 395
Query: 283 ALKAYLSAQNTPTKIEKHEAE 303
+ + Q +++ +
Sbjct: 396 FEQ--VRDQLAAEQLKADADK 414
>gi|282866310|ref|ZP_06275356.1| hypothetical protein SACTEDRAFT_5901 [Streptomyces sp. ACTE]
gi|282558896|gb|EFB64452.1| hypothetical protein SACTEDRAFT_5901 [Streptomyces sp. ACTE]
Length = 218
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 11/148 (7%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--------- 64
+ P++S + GE I + R A ++
Sbjct: 5 RRTALAVSAATLVAAPLLSACGGEAHPGAAAVVGGERIEVSAVQARTADVRSAQEASEQS 64
Query: 65 --LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSS 122
L K +G+L + + LI + + + +G++ V A +G +
Sbjct: 65 EQLVKKSGQLTRAKLHSLIFGRVLDRAAKDAGVSVSRKEVQQVRTAAAAQSGGDEGLRTV 124
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
L+++ + ++ L + P + +
Sbjct: 125 MLEQRWVAPGEIEEDLRKEVQLPKLAQA 152
>gi|255601607|ref|XP_002537715.1| rotamase, putative [Ricinus communis]
gi|223515366|gb|EEF24668.1| rotamase, putative [Ricinus communis]
Length = 396
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 50/157 (31%), Gaps = 10/157 (6%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
++ G+ E + + K E +L + N ++ + K +E +
Sbjct: 5 MRVGDEEAKKFYEENAAKFQGDEERRASHIL--VTFNGKKDAAAKAEAKKKIDEILAEVK 62
Query: 214 KDCNKLEKFASKIH-----DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGV 267
K +K + A K + G ++ + F++ L S + + P T+ G
Sbjct: 63 KSPDKFAELAKKYSQDPGSAANGGDLGFVKRGLMVKPFEDALFGMSPGSISGPIETEFGY 122
Query: 268 EYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEA 302
I + + + + + + K
Sbjct: 123 HIIKLNEVKGAAQSFDQVKGQIRAELMYQKALAKFSE 159
>gi|139474495|ref|YP_001129211.1| foldase protein PrsA [Streptococcus pyogenes str. Manfredo]
gi|73921823|sp|Q5X9P6|PRSA2_STRP6 RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|134272742|emb|CAM31015.1| foldase protein PrsA 2 precursor [Streptococcus pyogenes str.
Manfredo]
Length = 309
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 11 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 62
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 63 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 115
>gi|21911276|ref|NP_665544.1| foldase protein PrsA [Streptococcus pyogenes MGAS315]
gi|28896648|ref|NP_802998.1| foldase protein PrsA [Streptococcus pyogenes SSI-1]
gi|46396934|sp|Q8K5P3|PRSA2_STRP3 RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|21905490|gb|AAM80347.1| putative protease maturation protein [Streptococcus pyogenes
MGAS315]
gi|28811902|dbj|BAC64831.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 309
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 11 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 62
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 63 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 115
>gi|15675810|ref|NP_269984.1| foldase protein PrsA [Streptococcus pyogenes M1 GAS]
gi|19746923|ref|NP_608059.1| foldase protein PrsA [Streptococcus pyogenes MGAS8232]
gi|71911545|ref|YP_283095.1| foldase protein PrsA [Streptococcus pyogenes MGAS5005]
gi|46396706|sp|P60812|PRSA2_STRP1 RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|46396707|sp|P60813|PRSA2_STRP8 RecName: Full=Foldase protein prsA 2; Flags: Precursor
gi|13623038|gb|AAK34705.1| conserved hypothetical [Streptococcus pyogenes M1 GAS]
gi|19749171|gb|AAL98558.1| conserved hypothetical [Streptococcus pyogenes MGAS8232]
gi|71854327|gb|AAZ52350.1| protein export protein prsA precursor [Streptococcus pyogenes
MGAS5005]
Length = 309
Score = 40.0 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 11 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 62
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 63 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 115
>gi|313204245|ref|YP_004042902.1| ppic-type peptidyL-prolyl cis-trans isomerase [Paludibacter
propionicigenes WB4]
gi|312443561|gb|ADQ79917.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paludibacter
propionicigenes WB4]
Length = 451
Score = 39.6 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 94/258 (36%), Gaps = 35/258 (13%)
Query: 33 YKSWAMSSRIRTTINGEVITDGD----ISKRIALLKLQKINGELEKIAVQE--LIVETLK 86
KS R+R I+ I DGD I ++IA+ KL L+ + V E +I + K
Sbjct: 39 LKSEVEEQRLRAQIDNTPI-DGDPYCVIPEQIAIQKLFLHQAVLDSVTVNESSVINQVEK 97
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
+ +S I V +F +S ++ L ++ Q I D
Sbjct: 98 QLNYYESQIG-SKEKVEEYF-------KMSTKELREQL----------REITRNQQIIQD 139
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVR----EYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + ++ + + ++ E ++ V F P + + R+
Sbjct: 140 MQR-KLVGDIKSTPSDVRRFMKDLPADSIPTVPAEVELQIVSFEPPVPVTEINRIKE-RL 197
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKS--QNNTT 258
+D E D + L + S+ + + G+ ++ L P+F + +
Sbjct: 198 RDFTERVNSGSSDFSVLARLYSEDSESAKRGGELGFMGRGQLVPEFSAVAFNLLDPKKVS 257
Query: 259 NPYVTQKGVEYIAICDKR 276
T+ G I + +KR
Sbjct: 258 RIVQTEFGFHIIQLIEKR 275
>gi|258592100|emb|CBE68405.1| DSBA oxidoreductase precursor [NC10 bacterium 'Dutch sediment']
Length = 355
Score = 39.6 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 27/120 (22%)
Query: 39 SSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKSGI- 95
S+ I+ VIT +I K +A L KL+ +L + + ELI + L E ++ GI
Sbjct: 42 QSKAAAKIDDYVITLDEIEKALAPQLAKLEDQKFQLLESKLDELIEKRLLAVEAKRRGIT 101
Query: 96 --------------TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
V F Q L ++ G+ + YL+ Q
Sbjct: 102 VEDLLKAEVTSKIPEVSDAEVTAFITQ--NRARLQGDE-------AGLRPK-VRDYLSDQ 151
>gi|153831363|ref|ZP_01984030.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 623-39]
gi|229529056|ref|ZP_04418446.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae 12129(1)]
gi|148873155|gb|EDL71290.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae 623-39]
gi|229332830|gb|EEN98316.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae 12129(1)]
Length = 619
Score = 39.6 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 21/219 (9%), Positives = 56/219 (25%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIDQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + ++ + + + +L A
Sbjct: 363 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|327484462|gb|AEA78869.1| Peptidyl-prolyl cis-trans isomerase ppiD [Vibrio cholerae
LMA3894-4]
Length = 616
Score = 39.6 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 189 DIRTITLSLEDFAKKVTLSDEEIDQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 247
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 248 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 301
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 302 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 359
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK--KLRSNA 312
+ + + + + + ++ Y K +L A
Sbjct: 360 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 398
>gi|331678992|ref|ZP_08379664.1| type I restriction-modification system, R subunit [Escherichia coli
H591]
gi|331073057|gb|EGI44380.1| type I restriction-modification system, R subunit [Escherichia coli
H591]
Length = 1137
Score = 39.6 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI------AVQELIVETLKK 87
+ + ++ NGE +T ++ + L+ +Q N ++ + A L + L+
Sbjct: 989 PLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRALKEFYPRATASL-DKLLRT 1047
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
I DS+ V F Q A + L+++ F S L NH + Y I+
Sbjct: 1048 I------IGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLK------NHIRDYGTIEM 1092
>gi|194273637|gb|ACF39177.1| putative parvulin [Francisella novicida]
Length = 88
Score = 39.6 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
Q++ Q+ KD E ++ K + G + + P+F ++
Sbjct: 7 QSESECQQIKKDITEGKITFE---EAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFN 63
Query: 253 SQNNTT-NPYVTQKGVEYIAICDK 275
+ +T P TQ G + I +
Sbjct: 64 DELHTVHGPVQTQFGYHLLEITSR 87
>gi|56708512|ref|YP_170408.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89256686|ref|YP_514048.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica LVS]
gi|110670983|ref|YP_667540.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
tularensis FSC198]
gi|115315096|ref|YP_763819.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
OSU18]
gi|118497285|ref|YP_898335.1| parvulin-like peptidyl-prolyl isomerase domain-containing protein
[Francisella tularensis subsp. novicida U112]
gi|134301685|ref|YP_001121653.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis
subsp. tularensis WY96-3418]
gi|156502846|ref|YP_001428911.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|167010492|ref|ZP_02275423.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica FSC200]
gi|187931510|ref|YP_001891494.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323588|ref|ZP_03057365.1| ppic-type ppiase domain protein, putative [Francisella tularensis
subsp. novicida FTE]
gi|208779078|ref|ZP_03246424.1| ppic-type ppiase domain protein, putative [Francisella novicida
FTG]
gi|224457677|ref|ZP_03666150.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254369547|ref|ZP_04985558.1| hypothetical protein FTAG_01432 [Francisella tularensis subsp.
holarctica FSC022]
gi|254371139|ref|ZP_04987141.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875361|ref|ZP_05248071.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis
subsp. tularensis MA00-2987]
gi|290954279|ref|ZP_06558900.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis
subsp. holarctica URFT1]
gi|295312306|ref|ZP_06803095.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis
subsp. holarctica URFT1]
gi|11228666|gb|AAG33118.1|AF240631_1 putative peptidyl-prolyl cis-trans isomerase [Francisella
tularensis subsp. tularensis]
gi|11228669|gb|AAG33119.1|AF247642_1 putative peptidylprolyl isomerase [Francisella tularensis subsp.
holarctica]
gi|11228672|gb|AAG33120.1|AF247685_1 putative parvulin [Francisella tularensis subsp. mediasiatica]
gi|11228676|gb|AAG33122.1|AF247687_1 putative parvulin [Francisella tularensis subsp. holarctica]
gi|11228678|gb|AAG33123.1|AF247688_1 putative parvulin [Francisella novicida]
gi|11228680|gb|AAG33124.1|AF247689_1 putative parvulin [Francisella tularensis subsp. tularensis]
gi|11228682|gb|AAG33125.1|AF247690_1 putative parvulin [Francisella tularensis subsp. holarctica]
gi|21952446|gb|AAM82565.1|AF524865_1 peptidyl-prolyl trans isomerase [Francisella tularensis subsp.
tularensis]
gi|56605004|emb|CAG46105.1| Peptidyl-prolyl cis-trans isomerase. [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144517|emb|CAJ79832.1| Peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica LVS]
gi|110321316|emb|CAL09488.1| Peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
tularensis FSC198]
gi|115129995|gb|ABI83182.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
OSU18]
gi|118423191|gb|ABK89581.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella
novicida U112]
gi|134049462|gb|ABO46533.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151569379|gb|EDN35033.1| hypothetical protein FTBG_00899 [Francisella tularensis subsp.
tularensis FSC033]
gi|156253449|gb|ABU61955.1| peptidyl-prolyl cis-trans isomerase domain protein [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122501|gb|EDO66636.1| hypothetical protein FTAG_01432 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712419|gb|ACD30716.1| parvulin-like peptidyl-prolyl isomerase domain [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194322443|gb|EDX19924.1| ppic-type ppiase domain protein, putative [Francisella tularensis
subsp. novicida FTE]
gi|208744878|gb|EDZ91176.1| ppic-type ppiase domain protein, putative [Francisella novicida
FTG]
gi|254841360|gb|EET19796.1| peptidyl-prolyl cis-trans isomerase C [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282159725|gb|ADA79116.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
tularensis NE061598]
gi|328676774|gb|AEB27644.1| Peptidyl-prolyl cis-trans isomerase ppiC [Francisella cf. novicida
Fx1]
Length = 92
Score = 39.6 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251
Q++ Q+ KD E ++ K + G + + P+F + +
Sbjct: 11 QSESECQQIKKDITEGKITFE---EAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFN 67
Query: 252 KSQNNTTNPYVTQKGVEYIAICDK 275
+ P TQ G + I +
Sbjct: 68 DELHKVHGPVQTQFGYHLLEITSR 91
>gi|297182861|gb|ADI19012.1| parvulin-like peptidyl-prolyl isomerase [uncultured alpha
proteobacterium HF0070_05I22]
Length = 296
Score = 39.6 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 48/306 (15%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE- 73
+T +F V + S + A T+NG+ I D+ L + LE
Sbjct: 18 RITRHFGYGTLAAVCLASTIAQANEQISVGTVNGKDIWLDDVLHAAERLPQEFQQTPLEN 77
Query: 74 --KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
V ++I L + V Q A N
Sbjct: 78 YFSQLVADIIDSQL-AATAARFDAYDKKPEVAAAM-QLAAN------------------- 116
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ +S + V+ + + + + +L
Sbjct: 117 -----RVLAESWLAEKVRAEITETAIQSAYDKFVAD----TASREQVTASHILVETEAEA 167
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
+Q AE ++ + ++ + G + P F+
Sbjct: 168 KAVIAVLQDGGDFAELAKEK-----------STGPSGPNGGALGTFGRGQMVPAFETAAF 216
Query: 251 KKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ + + P TQ G I + K + AQ + +++LR
Sbjct: 217 SLTIGSYSDTPVQTQFGWHVIKVDGKDITPA--PDLEAMRAQLANNLSTQTLGRLLEELR 274
Query: 310 SNAIIH 315
++ I
Sbjct: 275 ASQDIQ 280
>gi|293369502|ref|ZP_06616081.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|292635387|gb|EFF53900.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
Length = 515
Score = 39.6 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 94/304 (30%), Gaps = 53/304 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG I +
Sbjct: 6 LLLGCI-SLFVVAVFAQEDPVLMRVNGREILRSEF------------------------- 39
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GDNHFKQYLAI 140
E ++ E+S S + + L E G+ + F++
Sbjct: 40 -EYAYRRYAERSNARLSSKE----YAALFAQSKLKVE----AARAAGLDTTSAFRKQ--Q 88
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++V++ ++L ++ A QKM + + +P +
Sbjct: 89 EKCRTELVES-YLLDRQVMDSCARAIYQKMGLKARSGRVQVMQIFKRLPQTITSRHLEEE 147
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
K D+ ++ D + D + LE+ +F+N+ ++ +
Sbjct: 148 KTRMDSIYQAIQNQPD-LNFNRLVEIYSDDKQSRWIECLETT--SEFENVAFSLAKGMAS 204
Query: 259 NPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
P+ T +G+ + + D+ + E + + + T +E+ + +
Sbjct: 205 QPFFTPEGIHILKVMDREETAAYENVSARLMERLRRKEILDKGTGAVLERLKKAWQYAPN 264
Query: 310 SNAI 313
A+
Sbjct: 265 QAAM 268
>gi|284043450|ref|YP_003393790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei
DSM 14684]
gi|283947671|gb|ADB50415.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Conexibacter woesei
DSM 14684]
Length = 379
Score = 39.6 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 60/229 (26%), Gaps = 21/229 (9%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E E+ GI V G D L + G+ + + L + +
Sbjct: 130 ETERLGIEVTDADVERAKRATFPRAG----DMQRTLRQLGMTERDVEFQLRFNQLSTRLT 185
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES 208
++ + EI A Y F++P+ + + + +
Sbjct: 186 EHLQRRPVDVGDAEISAY-----------YARNREQFAVPERRDLELILTRTETQANDAK 234
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL----LKKSQNNTTNPYVTQ 264
R ++S G LL Q + L + P Q
Sbjct: 235 RAVEGGTAWAAAARRWSTDELSKGNGGRLLGVARGQQDRALDAAAFDARRGVLLGPVRGQ 294
Query: 265 KGVEYIAICDKRDLGGEIALK--AYLSAQNTPTKIEKHEAEYVKKLRSN 311
G + + + A + + ++ EY + + +
Sbjct: 295 FGWYLVRVTRVTPSKQSTLAESSAQIRELVRQQESQRAMQEYARTFQES 343
>gi|294627916|ref|ZP_06706495.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292597830|gb|EFF41988.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 656
Score = 39.6 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 17/99 (17%)
Query: 51 ITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKSGITF 97
I+ D R ++Q+ + EK + +L+ E + + E +GI
Sbjct: 70 ISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVI 129
Query: 98 DSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNH 133
TV + + S + + + L + G
Sbjct: 130 GDATVRDYIANIPAFQVDGKFSPDQYRAALAQ-GTPPRT 167
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 6/141 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K + + + L +L S + + K K A E++ D L K S+
Sbjct: 277 EDEKARFVEPEQRLASHILISAGPDAAAQKAAEAKAAKLAAEAKQT-GTDFAALAKANSQ 335
Query: 226 IHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + + F++ L P ++ G I + + + G+
Sbjct: 336 DPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQGKS 395
Query: 283 ALKAYLSAQNTPTKIEKHEAE 303
+ + Q +++ +
Sbjct: 396 FEQ--VRDQLAAEQLKADADK 414
>gi|315221816|ref|ZP_07863728.1| foldase protein PrsA [Streptococcus anginosus F0211]
gi|315189049|gb|EFU22752.1| foldase protein PrsA [Streptococcus anginosus F0211]
Length = 312
Score = 39.6 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 71/207 (34%), Gaps = 22/207 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ + ++ +V+ + + + + T+ G IT D K N ++
Sbjct: 1 MKKKILAGAITLLSVVTLAACSQAGGKDIITMKGNTITVND------FYNKVKNNAAAQQ 54
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + I E + + G VN F + G F L + G+ ++ +
Sbjct: 55 VLLNMTIQEVFE----KSYGKHVTEKEVNETFNKSKSTYG---TAFQQVLARAGLTEDTY 107
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ + +V ++ +K + AN +K E + + + +
Sbjct: 108 REQIRT----NKLV--EYAVKKAAEKELTDANYKKAYESYTPEVTAQII--KVDNQDKAK 159
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + + + A+ ++ +K K
Sbjct: 160 EVLAKAKAEGADFGQIAKENSTDKKTK 186
>gi|222099866|ref|YP_002534434.1| hypothetical protein CTN_0892 [Thermotoga neapolitana DSM 4359]
gi|221572256|gb|ACM23068.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 580
Score = 39.6 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 75/250 (30%), Gaps = 27/250 (10%)
Query: 77 VQELIVETLKKQE-----IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-- 129
++ LI + +Q+ EK+ I V + G
Sbjct: 95 LKALIADVFLQQKVILYYAEKNNIKPSKKEVEQEVKSIINTIKNDQNQLDQIKRRYGSLS 154
Query: 130 --GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
++ + + +Q V + + ++ NK++++N +Y +
Sbjct: 155 VYEKDYLEPQIRVQLTVKKVQEAVGAVSEDEIKQYFEENKEELQN----QYDRVDLEAIS 210
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
D+ Q F+ K S + + + + + + G + ++
Sbjct: 211 FDSSSTVQEFLAK------ASEMGFDEAASSMGLTVQPFSNATRG----IFPEEIDTAL- 259
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYVK 306
+ + P+ + L A + + TK+E+ + ++++
Sbjct: 260 --FSATPGSIVGPFYFLDQWYVFRVQTSSVLTDFNAFENSDAYSEVKTKLEQEKFQKWLE 317
Query: 307 KLRSNAIIHY 316
+ + Y
Sbjct: 318 EFMREENLSY 327
>gi|329666851|gb|AEB92799.1| mismatch repair ATPase [Lactobacillus johnsonii DPC 6026]
Length = 788
Score = 39.6 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 14/193 (7%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEI----EKSGITFDSNTVNYFF 106
+ D+ K +L+ I G+ A I L E +S + + + +N
Sbjct: 467 MEFDLKKLAPTYRLRIGIPGQSNAFA----IAHQLGMNEAVVDKARSLMNDEDSDINKMI 522
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ T +AE L + K+ L W + + K E+ A
Sbjct: 523 ERLTEQTK-AAEQLHETLKQNVDQSVTLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAK 581
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K++ + + + + +++ ++ + + R NK+ + +
Sbjct: 582 KRQKADKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLAQNKVLQREKRR 637
Query: 227 HDVSIGKAQYLLE 239
HDVS+G +L
Sbjct: 638 HDVSVGDTVKVLS 650
>gi|54302531|ref|YP_132524.1| putative peptidyl-prolyl cis-trans isomerase C [Photobacterium
profundum SS9]
gi|46915953|emb|CAG22724.1| putative peptidyl-prolyl cis-trans isomerase C [Photobacterium
profundum SS9]
Length = 122
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV----SIGK 233
IR + SI + + K + AE+ +L K K + A K + S G
Sbjct: 21 LFIRNIRLSIMASTAAALHILVKHQEKAEDIIEQLKKG-AKFQTLAKKYSNCPSGKSGGD 79
Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPY--VTQKGVEYIAI 272
+ + PQF + P+ T+ G + +
Sbjct: 80 LGEFRKGQMVPQFDKVCFT--GELLTPHLVKTKFGWHIVKV 118
>gi|299770348|ref|YP_003732374.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter sp. DR1]
gi|298700436|gb|ADI91001.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter sp. DR1]
Length = 621
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 6 FTSLSDFIKLLTTYFVLIIF----CIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---K 58
S IK +LI+F +V I Y + + + T+NG+ I+ D+ +
Sbjct: 1 MESFRTVIKGWLGKVLLILFLTPLALVGIEGYFNRGNKADVAKTVNGQEISKKDLETLTQ 60
Query: 59 RIALLKLQKINGE--------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
L + G+ ++ A+ L+ L Q+ EK GI+ + Q
Sbjct: 61 SYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSDTQIEQMLAQ 118
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 35/116 (30%), Gaps = 7/116 (6%)
Query: 161 MEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
E + K + ++ + + I +++ ++++ +
Sbjct: 245 TEAELQQAYSKFVETQKKDAKRTVKHILITTDARDDAAAQKLAKEVYAKIQGGLTFAQAA 304
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS-----QNNTTNPYVTQKGVEYIA 271
S+ D S L+E+ F + K+ + P TQ G I
Sbjct: 305 SQFSE--DPSSKAKGGLVEAYAPGVFSDAFDKTVVSLKNGQISQPVKTQYGYHIIE 358
>gi|239617251|ref|YP_002940573.1| hypothetical protein Kole_0859 [Kosmotoga olearia TBF 19.5.1]
gi|239506082|gb|ACR79569.1| hypothetical protein Kole_0859 [Kosmotoga olearia TBF 19.5.1]
Length = 323
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 32/193 (16%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDG-----------DISKRI- 60
+K +L++F + + + T+NGE IT +I+K++
Sbjct: 1 MKKFLVISLLVLFSAGIFATSEINPDKTTPVATVNGEPITMYEFLAEVMPNYMEIAKKVE 60
Query: 61 -------ALLKLQKINGEL----EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
+L + L EK + ++I L Q ++ + D +
Sbjct: 61 EVDPLFSEVLTSTEAGKTLLTEYEKRVLAKMIERKLFLQLAKQLDVAIDMQALKEKIHNI 120
Query: 110 ----ARNTGLSAE--DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFM---LKYGNLE 160
+ +S E D L G ++ + ++ + + E
Sbjct: 121 IIQNLKENNISIEIADLYYTLKGYTGGLEMYEVRVLNETAYRQTYDAIYQALTSDATVTE 180
Query: 161 MEIPANKQKMKNI 173
EI + K I
Sbjct: 181 EEIVQYYKANKKI 193
>gi|94265725|ref|ZP_01289462.1| hypothetical protein MldDRAFT_4726 [delta proteobacterium MLMS-1]
gi|93453738|gb|EAT04114.1| hypothetical protein MldDRAFT_4726 [delta proteobacterium MLMS-1]
Length = 229
Score = 39.6 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%)
Query: 13 IKLLTTYFVLIIFCIV-------PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
+K L T +++ F I + A + G IT D+ + +A +
Sbjct: 1 MKSLATILLVLFFTAACGQQEQEKIGAEAGPASDEGYIVQVGGNYITPADVEQELAGMPE 60
Query: 66 QKINGELEKIAVQELIVETLKK----QEIEKSGITFDSN 100
+ Q LI E +K+ QE +++G+
Sbjct: 61 NRRTNYEMPGGKQRLIDEMIKREMFRQEAQRAGLDQSEE 99
>gi|302753416|ref|XP_002960132.1| hypothetical protein SELMODRAFT_74131 [Selaginella moellendorffii]
gi|300171071|gb|EFJ37671.1| hypothetical protein SELMODRAFT_74131 [Selaginella moellendorffii]
Length = 148
Score = 39.6 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+F+ G + + FQ + + +T+ P+ + G +I + +++
Sbjct: 89 AAEFSECPSGKKGGDLGWFPRGKMAGPFQEVAFSTPVGSTSAPFKSTHGYHFILVEGRKN 148
>gi|302804512|ref|XP_002984008.1| hypothetical protein SELMODRAFT_423141 [Selaginella moellendorffii]
gi|300148360|gb|EFJ15020.1| hypothetical protein SELMODRAFT_423141 [Selaginella moellendorffii]
Length = 148
Score = 39.6 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRD 277
+F+ G + + FQ + + +T+ P+ + G +I + +++
Sbjct: 89 AAEFSECPSGKKGGDLGWFPRGKMAGPFQEVAFSTPVGSTSAPFKSTHGYHFILVEGRKN 148
>gi|70730194|ref|YP_259933.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Pseudomonas fluorescens Pf-5]
gi|68344493|gb|AAY92099.1| PPIC-type PPIASE domain protein [Pseudomonas fluorescens Pf-5]
Length = 318
Score = 39.6 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 54/163 (33%), Gaps = 9/163 (5%)
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E++ + K +T Y + + + + Q V+++ ++ P +
Sbjct: 143 SPAELQQAYDSGKSAWMTPPLYRVSQIFLGVAE--PQAAEQVRRQAQELSRKAQAAPGEF 200
Query: 217 NKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAIC 273
L S+ D + G + L P+ ++ + + + + G + +
Sbjct: 201 AALAAQYSQDRDSAQRGGDSGLQPLQQLLPEVRSAVARLKVGGVSEVVQSAAGFHVLKLT 260
Query: 274 DK---RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
++ R + A + E+ Y++ + + A
Sbjct: 261 EQQPARTASLDELRDRLTQA-LRAQRQEQIAKAYLEGMLNTAT 302
>gi|261749602|ref|YP_003257288.1| peptidylprolyl cis-trans isomerase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497695|gb|ACX84145.1| peptidylprolyl cis-trans isomerase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 710
Score = 39.6 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DG-DISKRIALLKLQ 66
+ +I V++ F + P V +K +A S I +NGE I+ + D + + L+ +
Sbjct: 10 NPWILFFLIGIVMLAFILDPHVLFKFFAEKSSIFGKVNGENISIKEYVDCFQFLKQLRQE 69
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ + L+K LI E L Q+ K GI +
Sbjct: 70 ESDSHLKKETWNLLIHEKLLNQQAMKLGIQNTKKDFWDAISR 111
>gi|289423524|ref|ZP_06425325.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L]
gi|289156026|gb|EFD04690.1| foldase protein PrsA [Peptostreptococcus anaerobius 653-L]
Length = 252
Score = 39.6 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 72/243 (29%), Gaps = 41/243 (16%)
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ V+ A + + F +++G ++ + I ++ D +
Sbjct: 9 KIGDKEITAADVE-AAISSIDPYQRQQFDNEEG------RKRILADLINQELFYLDAIEN 61
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVL--------------------FSIPDNKLQNQ 195
+ + + +K +++Y I ++ F P+
Sbjct: 62 KLDQDENFVKEMELIKINMIKQYAINKIIASVEVSDEEKLNYYEENKAQFVSPEMVSAKH 121
Query: 196 GFV--QKRIKDAEESRLRLPKDCNKLE-KFASKIHDVSIGKAQYLLESDLHPQFQNL-LK 251
V + + K+ + + +++ ++ G + + P+F+
Sbjct: 122 ILVDEEDQAKEIKTKIDKKEMSFEDAAVEYSKCPSNMKGGDLGEFGKGQMVPEFEEAAFA 181
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKR--------DLGGEIALKAYLSAQNTP--TKIEKHE 301
+ P +Q G I + + D+ E+A QN K+ +
Sbjct: 182 LEVGKVSEPVKSQFGYHIIKVESHKEEGQLEFEDVKDEVANAVAYKKQNEAFVGKLTELT 241
Query: 302 AEY 304
Y
Sbjct: 242 DRY 244
>gi|228911670|ref|ZP_04075447.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200]
gi|228847994|gb|EEM92871.1| Foldase protein prsA 2 [Bacillus thuringiensis IBL 200]
Length = 275
Score = 39.6 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 81/271 (29%), Gaps = 43/271 (15%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK--QEIEKSGITFDSNTVNYFFVQ 108
IT D++ LK + L + +++L++ K E +K V+ + Q
Sbjct: 24 ITQNDLN---KELKNKYGKEVLSSMMIEQLLLNKYKVSNDEAQK--------KVDEYKKQ 72
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQY-LAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
N + ++ FK+ + Q +K E E+
Sbjct: 73 MGENFKSTLSQLRFQ------NEDEFKEKMIKPQIALEKAIKA------SITEKEL---- 116
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH 227
K+ + +L ++ Q+ E SK
Sbjct: 117 ---KDYYKPTLKVSHILVK-------DEKKAQEIKDKLNNGGDFASLAKEHSEDPGSKEQ 166
Query: 228 DVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+G+ + + +F+ K + P + G I + DK++L K
Sbjct: 167 GGDLGELDAVKMEPMDSKFKEATYKLEVGQISEPVKSSFGYHIIKVTDKKELKPFDQEKD 226
Query: 287 YLSAQNTP--TKIEKHEAEYVKKLRSNAIIH 315
+ + K + + + +K L +
Sbjct: 227 NIQKELETMRAKNPQWQQKLIKDLIKKENVQ 257
>gi|229521840|ref|ZP_04411257.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TM
11079-80]
gi|229340765|gb|EEO05770.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TM
11079-80]
Length = 619
Score = 39.6 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 21/219 (9%), Positives = 56/219 (25%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIEQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + ++ + + + +L A
Sbjct: 363 KTPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|182419506|ref|ZP_02950757.1| foldase protein PrsA [Clostridium butyricum 5521]
gi|237666290|ref|ZP_04526277.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182376636|gb|EDT74209.1| foldase protein PrsA [Clostridium butyricum 5521]
gi|237658380|gb|EEP55933.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 247
Score = 39.6 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 84/283 (29%), Gaps = 57/283 (20%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
M +++ G IT+ D++ IA Q+ + A + L+ + + + K G
Sbjct: 1 MENKVLAIAAGHEITENDLNALIARYPEQQRAAFNSEEAKKNLLEQLISFELFNKFGQEL 60
Query: 98 DSNTVNYFFVQHARNTG--LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ + + A T L++ + L + D K+Y
Sbjct: 61 ELDKTQEYKDAVASITKEVLTSMAMNKALADVTVTDEDAKKY------------------ 102
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
Y FS+P V+ ++A + + +
Sbjct: 103 ----------------------YDENKDAFSVPPTVSARHILVKT-EEEANKVKEEINGG 139
Query: 216 ---CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI- 270
+ K++S G + + P+F+ + T P TQ G I
Sbjct: 140 LSFADAAMKYSSCPSKEQGGNLGEFSKGMMVPEFEKASFEAEIGVLTEPVKTQFGYHLII 199
Query: 271 -------AICDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEY 304
A+ ++ + + Q + + + +Y
Sbjct: 200 VDSKNEGAVKSFEEVKDSVVNELLKRNQHKKYDDLMNQLQEKY 242
>gi|110639640|ref|YP_679850.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC
33406]
gi|110282321|gb|ABG60507.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC
33406]
Length = 697
Score = 39.6 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 3/96 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLL 238
+LF + + K+ + ++ K+ + G +
Sbjct: 341 ASHILFRTNETDPAEKKAEAKKQAQQILAEIQNGASFEKMAAQYGGDGTAANGGDLGWFG 400
Query: 239 ESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAI 272
+ + F+N + N TQ G I +
Sbjct: 401 KGQMVKPFENAIFGASKPGLLPNIVETQFGYHIIRV 436
Score = 35.8 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 18/190 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKS----WAMSSRIRTTINGEVIT----DGDI 56
+F ++ L+ V + + ++ S ++ + I+G IT +I
Sbjct: 3 IFNKINQRSGLVVGTIVAGLLLFLLGDAFTSKNSFFSSFNNKVGEIDGSNITVEEFQKEI 62
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNT-VN----YFFVQHAR 111
+K AL N ++ +A +L+ E + K EK+GI V+ +
Sbjct: 63 TKAEALYGGNGNNANMDDLAWTQLVFERVNKVVYEKAGIEISEGEKVDLLEGEHMSDVVK 122
Query: 112 NTGLSAEDFSSFLDKQG---IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
SAE FL I + + + W + + + + + I +
Sbjct: 123 QQFGSAEQLKQFLKYLDSDQIQSEEERASIKGR--WRALKEYVYNERMRSKYETIIKKSE 180
Query: 169 KMKNITVREY 178
+ + Y
Sbjct: 181 YVTKAEAKRY 190
>gi|187478286|ref|YP_786310.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N]
gi|115422872|emb|CAJ49400.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N]
Length = 93
Score = 39.6 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NN 256
+ R ++ + + + +S G ++ +F ++ + N
Sbjct: 13 TEARAQELKTAIQNGADFAEVARENSSCPSARQGGDLGTFGPGEMVREFDQVVFSAPVNE 72
Query: 257 TTNPYVTQKGVEYIAICDKRD 277
P TQ G + + +RD
Sbjct: 73 VQGPVKTQFGYHLVEVTSRRD 93
>gi|114052054|ref|NP_001040206.1| rotamase Pin1 [Bombyx mori]
gi|87248389|gb|ABD36247.1| rotamase Pin1 [Bombyx mori]
Length = 169
Score = 39.6 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 12/107 (11%)
Query: 176 REYLIRTVLFSIPDNKLQ---NQGFVQKRIKDA----EESRLRLPKDCNKLEKFASKIHD 228
+E +L ++ + + + ++A +E R ++ K E+ AS D
Sbjct: 59 KEVRCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSD 118
Query: 229 VSI----GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
S G + + F+++ + P T G+ I
Sbjct: 119 CSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDSGIHII 165
>gi|94984847|ref|YP_604211.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
geothermalis DSM 11300]
gi|94555128|gb|ABF45042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Deinococcus
geothermalis DSM 11300]
Length = 345
Score = 39.6 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 79/285 (27%), Gaps = 32/285 (11%)
Query: 40 SRIRTTINGEVIT--DGDISKRIALLKLQKING------------ELEKIAVQELIVETL 85
+ + E T D D + R A+ ++ G E + + +
Sbjct: 56 QTVVAQVGNETYTLADFDRAFRQAVARVLNAQGVPYTPDLLAEFAEARPDFLTQFARDRA 115
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
Q ++ ++ + AR S DF L G +
Sbjct: 116 VYQLARRT-TQVKPADIDAQVAE-ARKGFSSDADFQQALQASGYENE---AEFRADLERQ 170
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
VV+ ++ + A Q Y + F+ P V+ + +
Sbjct: 171 AVVQA-YLDSIKSRLTFGDALVQSF-------YNLNRAAFNRPAQACVKHILVKTQAEAQ 222
Query: 206 EESR-LRLPKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYV 262
R L+ D +L + S+ G L + F + + N
Sbjct: 223 GVLRDLQGGADFAQLAQQKSQDPGSAADGGDLGCLSPGETVAAFDKVAFSAPLNQPQVVQ 282
Query: 263 TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
T+ G + + + + G + + ++ +Y+
Sbjct: 283 TEYGWHVLVVTKRSEAG--VPPLSEVAPLIREQLARDAAQKYLDA 325
>gi|301631437|ref|XP_002944804.1| PREDICTED: chaperone surA-like [Xenopus (Silurana) tropicalis]
Length = 255
Score = 39.6 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 12/145 (8%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD----CNKLEKFASK-IHDVSIGKA 234
+R VL+++ Q ++ +A LR D + + S G+
Sbjct: 105 LRHVLYAVTPGVDVRQL---RQHAEALLLELRCADDGGTRFAQAARQWSNCPSGQEGGEL 161
Query: 235 QYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSA 290
+L D P+F + +Q + ++ G+ + +C+++ ++A ++
Sbjct: 162 GWLRAEDCAPEFARAVFGTQEVGVLSRLVHSRFGLHVVEVCERQPGEALPFEQIRASVAL 221
Query: 291 QNTPTKIEKHEAEYVKKLRSNAIIH 315
+Y++ L NA +
Sbjct: 222 LLRQQAWVNALRQYLQLLVDNAEVE 246
>gi|294056332|ref|YP_003549990.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM
45221]
gi|293615665|gb|ADE55820.1| folate-binding protein YgfZ [Coraliomargarita akajimensis DSM
45221]
Length = 307
Score = 39.6 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 83/255 (32%), Gaps = 39/255 (15%)
Query: 46 INGEVITDGDISK---RIALLKLQKINGELEKIAVQELI---VETLKKQEIEKSGITFDS 99
+ G+VI D I + LL + E + +++ I L+ E + I+
Sbjct: 50 VKGKVIADSFILQCDEESFLLYSATSSAEGLQAKLEQHIIADDVELEISEGARV-ISLFG 108
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD----NHFKQYLAIQSIWPDVVKNDFMLK 155
V + S F++ G+ N + + +V+
Sbjct: 109 PGVESALTEWGA----SVPQTGDFVEHAGVRLLPVWNGPRPRVDC------IVR-----D 153
Query: 156 YGNLEMEIPANKQKMKN-ITVREYLIRTV---LFSIPDNKLQNQGFVQKRIKDAEESRLR 211
L+ + A K+ + + + V +P + + AE L
Sbjct: 154 AAALDTVVDALKRLSVEFVDTNRFELERVEQGYPVVPQELGEGDLPGE---GGAENYALS 210
Query: 212 LPKDCNKLEKFASKIHD-VSIGKAQYLL-----ESDLHPQFQNLLKKSQNNTTNPYVTQK 265
K C ++ +++H+ + +A Y + + Q + K+ + +VT
Sbjct: 211 FTKGCFLGQEVVARMHNLGTPRRALYRVSGVGDPPAVPQALQTMEGKTAGELRSAFVTAD 270
Query: 266 GVEYIAICDKRDLGG 280
G +A+ +G
Sbjct: 271 GWLGVAMLKLSAVGA 285
>gi|229515304|ref|ZP_04404764.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TMA 21]
gi|229348009|gb|EEO12968.1| peptidyl-prolyl cis-trans isomerase PpiD [Vibrio cholerae TMA 21]
Length = 619
Score = 39.6 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 21/219 (9%), Positives = 56/219 (25%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIDQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DEAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RD--LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ + ++ + + + +L A
Sbjct: 363 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|94989370|ref|YP_597471.1| foldase protein PrsA [Streptococcus pyogenes MGAS9429]
gi|94993261|ref|YP_601360.1| foldase protein PrsA [Streptococcus pyogenes MGAS2096]
gi|94542878|gb|ABF32927.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS9429]
gi|94546769|gb|ABF36816.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS2096]
Length = 317
Score = 39.6 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 19 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 70
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 71 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 123
>gi|284006425|emb|CBA71661.1| peptidyl-prolyl cis-trans isomerase D [Arsenophonus nasoniae]
Length = 623
Score = 39.6 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 20/166 (12%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
M + T+ + + + +++ F + + SY S+ + +NG I+ + +
Sbjct: 1 MMDNLRTAANSLVLKIVFVIIILSFVLTGVGSYLIGGSSNHV-AKVNGTAISQVQLQQAF 59
Query: 61 ALLK--LQKINGE--------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
K LQ+ G+ L + A++ LI TL Q + G+T N V
Sbjct: 60 QQEKQVLQERLGDQFAEIASSEQGMQMLRRQALERLIGVTLLNQYSNQLGLTASDNQVKQ 119
Query: 105 FFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ +E + + L + + + Q + I +
Sbjct: 120 DIYNMPIFQTDGHFDSEKYRTILSQHNVNADDLAQEIRQNLINRQL 165
>gi|116625903|ref|YP_828059.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229065|gb|ABJ87774.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 1137
Score = 39.6 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 57/202 (28%), Gaps = 14/202 (6%)
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
A+ S+ +QG F+ + I W E + + K
Sbjct: 458 AQKLSAEFARQGQTVAAFRARIEIAYSWRR--STHHEPCLAVTEAVLRELRGKPYPWLTG 515
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ + I ++ D E SR + + + H +S A
Sbjct: 516 RAHLEHSI-CIARAGDLGAAQQERERTDTEVSRAGFSGLALQARQLLTSAHALSGNSAAV 574
Query: 237 LLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK----RDLGGEIALKAYLS-AQ 291
+ + + + Q+ + +A+ K ++ + A L+ +
Sbjct: 575 W--ETSPKELETYWSTAAGEASA----QQALYDLALSAKAMGWKEAAPAVQGGAVLALER 628
Query: 292 NTPTKIEKHEAEYVKKLRSNAI 313
++E Y+ L A
Sbjct: 629 WGNRQLEAPNRVYLASLLQVAN 650
>gi|71904380|ref|YP_281183.1| foldase protein PrsA [Streptococcus pyogenes MGAS6180]
gi|209560163|ref|YP_002286635.1| foldase protein PrsA [Streptococcus pyogenes NZ131]
gi|71803475|gb|AAX72828.1| protein export protein prsA precursor [Streptococcus pyogenes
MGAS6180]
gi|209541364|gb|ACI61940.1| Peptidylproline cis-trans-isomerase [Streptococcus pyogenes NZ131]
Length = 316
Score = 39.6 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 18 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 69
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 70 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 122
>gi|23098603|ref|NP_692069.1| post-translocation molecular chaperone [Oceanobacillus iheyensis
HTE831]
gi|46396906|sp|Q8CXK4|PRSA_OCEIH RecName: Full=Foldase protein prsA; Flags: Precursor
gi|22776830|dbj|BAC13104.1| protein secretion (post-translocation molecular chaperone)
[Oceanobacillus iheyensis HTE831]
Length = 299
Score = 39.6 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 63/166 (37%), Gaps = 25/166 (15%)
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI-PANKQKMKNIT 174
S EDF++ +++Q G+ ++ + + + K ++EI + Q++
Sbjct: 86 SEEDFNTTVEQQFGGEEQLREIMYVSML---------QEKAAAEDVEITEEDLQELYERK 136
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IG 232
E + +L ++ VQ++I+D E D +L + S + G
Sbjct: 137 NTEIQAQHILLE----NEEDVAEVQQKIEDGE--------DFGELAQEYSTDTGSAENGG 184
Query: 233 KAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
Y + P+F+ ++P + G I + D R+
Sbjct: 185 DLGYFSAGSMVPEFEEAAFSLEAGEISDPVQSTHGTHIIKVNDVRE 230
>gi|306826547|ref|ZP_07459856.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes ATCC
10782]
gi|304431274|gb|EFM34274.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes ATCC
10782]
Length = 316
Score = 39.6 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 18 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 69
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 70 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 122
>gi|78046641|ref|YP_362816.1| peptidylprolyl isomerase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78035071|emb|CAJ22716.1| peptidylprolyl isomerase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 656
Score = 39.6 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 21/168 (12%)
Query: 51 ITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKSGITF 97
I+ D R ++Q+ + EK + +L+ E + + E +GI
Sbjct: 70 ISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVI 129
Query: 98 DSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQY--LAIQSIWPDVVKNDF 152
TV + + S + + + L + G Q+ L S+ V+
Sbjct: 130 GDATVRDYIANIPAFQVDGKFSPDQYRAALAQ-GTPPRTPAQFDALVRDSLQQSVIPQAV 188
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ E + M R+ + + D + +++
Sbjct: 189 AESGFATKSEFERLLKLM--GETRDVELAMLPPPAADTAPVSDAQIKQ 234
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKDAGGDLGWVEKGAMVKPFEDALFSMKAGEVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + Q +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADADK 414
>gi|296272834|ref|YP_003655465.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter
nitrofigilis DSM 7299]
gi|296097008|gb|ADG92958.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Arcobacter
nitrofigilis DSM 7299]
Length = 95
Score = 39.6 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275
E+++ G+ + + +F++++ + P T+ G I + +
Sbjct: 34 EAAEQYSLCPSGDQGGELGTFGKGQMVKEFEDVVFSAPVGEIQGPVQTEFGYHLIEVTSR 93
Query: 276 RD 277
D
Sbjct: 94 ND 95
>gi|238916652|ref|YP_002930169.1| primosomal protein N (replication factor Y) (superfamily II
helicase) [Eubacterium eligens ATCC 27750]
gi|238872012|gb|ACR71722.1| primosomal protein N (replication factor Y) (superfamily II
helicase) [Eubacterium eligens ATCC 27750]
Length = 738
Score = 39.6 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 24/147 (16%)
Query: 51 ITDGDISKRIALLKL----QKINGELEKIAVQELI--VETLKKQEIEKSGITFDSNTVNY 104
IT+G ++ +LKL + G A++ +I + +K++E + D+
Sbjct: 71 ITEGKVTAVSRMLKLAAWLKHNYGCTMNQAIKTVIPVKDKVKQKEKRSVNLIIDTAQAQK 130
Query: 105 FFVQHARNTGLSAEDFSSFLDKQ------------GIGDNHFKQYLAIQSIWPDVVK--- 149
+ A+ + L K+ I K + +V
Sbjct: 131 YLDVFAKKNAKARYRLLEVLIKEPVIDESIIKSKLNITAQTVKAF--EDMGIAEVRSEDM 188
Query: 150 -NDFMLKYGNLEMEIPANKQKMKNITV 175
+ + I NKQ+ K +
Sbjct: 189 YRNPVRNVSGERKNIELNKQQKKAVDT 215
>gi|163841994|ref|YP_001626399.1| trigger factor [Renibacterium salmoninarum ATCC 33209]
gi|189035949|sp|A9WUW4|TIG_RENSM RecName: Full=Trigger factor; Short=TF
gi|162955470|gb|ABY24985.1| trigger factor, ppiase [Renibacterium salmoninarum ATCC 33209]
Length = 471
Score = 39.6 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
E+ E+I++ + +K I+ + + V A G+ F+ LD+ G
Sbjct: 336 NTERAFKNEIILDAV----ADKEEISVSQAELIDYIVNSASQYGMDPNQFAQMLDQSG 389
>gi|153827658|ref|ZP_01980325.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MZO-2]
gi|149737864|gb|EDM52769.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae MZO-2]
Length = 592
Score = 39.6 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIEQYY-KTNTERFTRSEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK--KLRSNA 312
+ + + + + + ++ Y K +L A
Sbjct: 363 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|86133089|ref|ZP_01051671.1| peptidylprolyl isomerase [Polaribacter sp. MED152]
gi|85819952|gb|EAQ41099.1| peptidylprolyl isomerase [Polaribacter sp. MED152]
Length = 544
Score = 39.6 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 88/299 (29%), Gaps = 54/299 (18%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL- 80
LI+ + + ++ TI E I + KR+ L I+ E K + L
Sbjct: 4 LILLLFIVFTTASIAQKKDKVLITIGDEKIMVSEF-KRVYEKNLDAIDNEEAKDLEKNLD 62
Query: 81 --IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
I LK +E I D+ + + ++ L
Sbjct: 63 LFINYKLKVKEA--YDIKLDT------LSSYVKEMK------------------TYRNQL 96
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
A + A + + + LIRT + P + L+ +
Sbjct: 97 AAPY---------MQDSAYVSVLVKDAYFRTKNEVKAKHILIRTPKVATPKDTLKAYQKI 147
Query: 199 QKRI------KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
K +D E+ + +D A + G Y + F+N
Sbjct: 148 MKIRDRILKGEDFEKVAEEVSED-ESARADAKSGRVGNKGNLGYFSAFKMVYPFENAAYT 206
Query: 253 SQ-NNTTNPYVTQKGVEYIAICDKRDLGGE-------IALKAYLSAQNTPTKIEKHEAE 303
++ + + P+ T+ G + + R GE I K + T + E +
Sbjct: 207 TKIDEVSMPFRTRFGYHILKVDGLRPSKGEVEVAHILITDKTAKGEEIINTVYNRLEKD 265
Score = 36.9 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 10/155 (6%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQ-GFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
K + E + +L + K + V R++ E+ ++ K + +
Sbjct: 226 KVDGLRPSKGEVEVAHILITDKTAKGEEIINTVYNRLEKDEQFKMLARKYSDDTGSKSKG 285
Query: 226 IHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIA 283
GK + + F + + + P+ T+ G + + K +
Sbjct: 286 ------GKLRRFGSGVMVQPFDEVAFSLTKEGEYSKPFRTRFGWHIVQLIKKHPVKSFEE 339
Query: 284 LKAYLSAQN-TPTKIEKHEAEYVKKLRSNAIIHYY 317
+K L+++ + +++ E V +L+ I +
Sbjct: 340 MKKELTSKIRSSDRLQLSEKAVVNRLKKEYKIKEF 374
>gi|332712099|ref|ZP_08432027.1| hypothetical protein LYNGBM3L_71240 [Lyngbya majuscula 3L]
gi|332348905|gb|EGJ28517.1| hypothetical protein LYNGBM3L_71240 [Lyngbya majuscula 3L]
Length = 252
Score = 39.6 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 20/191 (10%), Positives = 61/191 (31%), Gaps = 17/191 (8%)
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ + + ++ GIT V + L A + ++L Q + ++ ++ +
Sbjct: 34 QRVINKAAQERGITVTPEDVQAQADEIRYANRLEKAAETLAWLADQMVTAEDWEAGISDR 93
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + ++ F Y ++E N+ + + V + + ++ + F Q
Sbjct: 94 LLAQKLAESLF---YKDVEKSFAQNRLDFEQVLVYQ-------ILVDSEEIAQELFYQIE 143
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY 261
+ D + + + + ++ + T+P
Sbjct: 144 EGEISFYEAAHFYDIDPERQRRCGYEGKLPR---WSFKPEIA---ALIFSVQPGEVTHPL 197
Query: 262 VTQKGVEYIAI 272
T++G +
Sbjct: 198 QTEQGYHLFLV 208
>gi|328675822|gb|AEB28497.1| Peptidyl-prolyl cis-trans isomerase ppiC [Francisella cf. novicida
3523]
Length = 92
Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
Q++ Q+ KD E ++ K + G + + P+F ++
Sbjct: 11 QSESECQQIKKDITEGKITFE---EAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFN 67
Query: 253 SQNNTT-NPYVTQKGVEYIAICDK 275
+ +T P TQ G + I +
Sbjct: 68 DELHTVHGPVQTQFGYHLLEITSR 91
>gi|288556815|ref|YP_003428750.1| hypothetical protein BpOF4_19095 [Bacillus pseudofirmus OF4]
gi|288547975|gb|ADC51858.1| hypothetical protein BpOF4_19095 [Bacillus pseudofirmus OF4]
Length = 253
Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 21/179 (11%)
Query: 41 RIRTTINGEVITDGD----ISKRIALLKL----------QKINGELEKIAVQELIVETLK 86
+ T+NGE I D + + + Q + E++ +Q LI + L
Sbjct: 60 EVVATVNGEDIERDDYVRAVESQAMMYTQFGIDFNDEEGQAMLEEVKDGVLQGLIEDRLL 119
Query: 87 KQEIEKSGITFDSNTVNYFFV-QHARNTGLSAEDFSSFLDKQGIGDNHFKQ----YLAIQ 141
Q E + ++ A++ S E L +QG ++ L +Q
Sbjct: 120 IQASED--VEVTDEEIDQELEMAMAQSQIESQEQLEELLAEQGFTVEDLREDFEKQLRVQ 177
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + + + ++ SI +Q Q+
Sbjct: 178 KFIEEQTEAPEVSEEEIQSAYDQQVEMAEQSGAEEIPSFEEQRDSIEAELIQEARMAQR 236
>gi|228965301|ref|ZP_04126394.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794386|gb|EEM41899.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 94
Score = 39.3 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 251 KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY----VK 306
K ++P T G I + DK++L +K + +++ ++ V
Sbjct: 10 KLDAGQVSDPVKTTYGYHIIKVTDKKELKPFDEVKDKIRKDLEQQRLQDTTGKWKQQVVN 69
Query: 307 KLRSNAII 314
L ++A I
Sbjct: 70 DLLNDADI 77
>gi|50915078|ref|YP_061050.1| foldase protein PrsA [Streptococcus pyogenes MGAS10394]
gi|94995221|ref|YP_603319.1| foldase protein PrsA [Streptococcus pyogenes MGAS10750]
gi|50904152|gb|AAT87867.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS10394]
gi|94548729|gb|ABF38775.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS10750]
Length = 317
Score = 39.3 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
V+ + +V + + +S ++++ + G+ IT D + N EL + A+ L
Sbjct: 19 VVTLATVVTLSACQSSHNNTKLVSM-KGDTITVSDFYN-------ETKNTELAQKAMLSL 70
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + + + V + Q A G S F + L + G+ +K+ +
Sbjct: 71 VISRVFETQYAN---KVSDKEVEKAYKQTADQYGTS---FKTVLAQSGLTPETYKKQIR 123
>gi|310779548|ref|YP_003967881.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ilyobacter
polytropus DSM 2926]
gi|309748871|gb|ADO83533.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Ilyobacter
polytropus DSM 2926]
Length = 575
Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 30/271 (11%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV-NYFFVQ-HARNT 113
I K ALL + ++ AV E V+ L++ +EK G + + N A
Sbjct: 203 IEKYSALLH--EEKENMKLEAVDEEYVKYLEQPSLEKDGFVITNVDMANRTIRNLFATGG 260
Query: 114 GLS-AEDFSSFLDKQGI--GDNHFKQYLAIQ---------SIWPDVVKNDFMLKYGNLEM 161
++ AE+ + + I K+ L+++ ++ D Y E
Sbjct: 261 EVTQAEEMTKQSFETDIKIAKEAIKRGLSVEENLSTTDKLYGLRTKLEKDIKDSYKVSED 320
Query: 162 EIPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
E+ K K+ T V F ++ + ++K E + P++ +L
Sbjct: 321 ELKNFFEKNKLAYDTAASSDANIVEFKAEVSEKDKETALEKAK---EILKEATPENFEEL 377
Query: 220 E-KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPY--VTQKGVEYIAICDKR 276
K++ G + + + F++ + K ++ P TQ G I + +K
Sbjct: 378 AIKYSEGPSGPKGGDLGWFEKGQMVKPFEDAVFKGESGKVYPEIVETQFGHHIIYVEEKE 437
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+ KA KI + +K
Sbjct: 438 E------SKAKARHILITNKISDETKKLLKD 462
>gi|119487787|ref|ZP_01621296.1| hypothetical protein L8106_29935 [Lyngbya sp. PCC 8106]
gi|119455620|gb|EAW36757.1| hypothetical protein L8106_29935 [Lyngbya sp. PCC 8106]
Length = 247
Score = 39.3 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 86/268 (32%), Gaps = 42/268 (15%)
Query: 45 TIN--GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV 102
+N G +T+ +I ++ LK Q E + + + + +++ IT S+ +
Sbjct: 1 MVNKSGTSVTNDEI---VSFLKEQLQYKEFCQKILSQ----RAIHRAVQEREITVTSDEI 53
Query: 103 NYFFVQHARNTGL-----SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
A L A D ++L Q I + ++ + + + + F +
Sbjct: 54 QAE----ADRQRLVRRLEKASDTLAWLTDQRISPDDWEAGIQQGILAKKLAETLFASEVE 109
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + L+ ++ +P +L + F Q ++ D
Sbjct: 110 KYFAQ--------NRLDYEQVLLYQII--VPYERLARELFYQIEEEEISFYHAAHLYDIE 159
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
K + + + L + + P+ T G +
Sbjct: 160 KKRRELCGYEGQLNRRHLKADIAAL------VFGATPGEIIGPHQTDLGYHLFKV----- 208
Query: 278 LGGEIALKAYLSAQNTPTKIEKHEAEYV 305
E + A L+ + + I+K E++
Sbjct: 209 ---EEFIPAELTEEYSQKIIQKLFKEWL 233
>gi|166710933|ref|ZP_02242140.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 656
Score = 39.3 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ K Q N + + +L+ E + + E +GI TV +
Sbjct: 81 QARMQERKRQGENFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDATVREYIAN 140
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 141 IQAFQVDGKFSPDQYRAALAQ-GTPPRT 167
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGDVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + Q +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADTDK 414
>gi|326671839|ref|XP_001922323.3| PREDICTED: IQ motif and SEC7 domain-containing protein 1-like
[Danio rerio]
Length = 1121
Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 23/194 (11%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVN--- 103
+G + ++ +R KLQ L K A +E I + E + V
Sbjct: 50 DGPPLYAHEVRQRPRRPKLQHSQSILRKQAEEEAIKRSRSLSESYELSTDLQDKQVEMLE 109
Query: 104 -----YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
F +HA T +A F + + + ++ +N +
Sbjct: 110 RKYGGRFITRHAARTIQTA--FRQY--QMNKNFERLRSSMS---------ENRMSRRIVL 156
Query: 159 LEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNK 218
M + + + + + + + V S+ D+ + VQ + + ++ P +
Sbjct: 157 SNMRMQFSFEGPEKVHSSYFEGKQV--SLTDDGSKLGALVQSERGEMVPANMKSPAVQSD 214
Query: 219 LEKFASKIHDVSIG 232
+++ DV
Sbjct: 215 FTDAITELEDVFSR 228
>gi|149180663|ref|ZP_01859167.1| hypothetical protein BSG1_16940 [Bacillus sp. SG-1]
gi|148851816|gb|EDL65962.1| hypothetical protein BSG1_16940 [Bacillus sp. SG-1]
Length = 255
Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 3/150 (2%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+L++ + LI +TL QE +K G + F L G+
Sbjct: 104 QLKESTIDSLIGQTLLLQEADKKGYEATDEEIQKEIDTLKA-NYEDEAQFEEILKTNGLT 162
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
+ K +A + V+ + ++ + ++ A + + + + +
Sbjct: 163 IDQLKTEVANNIKYTAFVEKELTIEE-VKDEDVKAYYDQYAEQSSGSEESESQIPEYEEV 221
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
K Q + ++ R K E ++ +
Sbjct: 222 KDQIKQELE-RQKTQEVLAAKVQELKENAS 250
>gi|320120479|gb|ADW16164.1| hypothetical protein HMPREF0389_01719 [Filifactor alocis ATCC
35896]
Length = 426
Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ E+ L+++ + K E I + + + A + E + + +
Sbjct: 351 DAERKVRNSLVLDEISKAE----NIEVSDEDLEKEYTKMAEQYKMEVEKVKELVGRTDVE 406
Query: 131 DNHFKQYLAIQ 141
K + IQ
Sbjct: 407 V--LKDNIRIQ 415
>gi|291165523|gb|EFE27573.1| trigger factor [Filifactor alocis ATCC 35896]
Length = 426
Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ E+ L+++ + K E I + + + A + E + + +
Sbjct: 351 DAERKVRNSLVLDEISKAE----NIEVSDEDLEKEYTKMAEQYKMEVEKVKELVGRTDVE 406
Query: 131 DNHFKQYLAIQ 141
K + IQ
Sbjct: 407 V--LKDNIRIQ 415
>gi|197123566|ref|YP_002135517.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
gi|196173415|gb|ACG74388.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
K]
Length = 590
Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 78/287 (27%), Gaps = 53/287 (18%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE----KIAVQELIVETLKKQEI 90
S + I+ +V+ ++ + +A ++ G K +Q LI L E
Sbjct: 69 SPLFTQTPVARIDDQVVRLAELQEALATTHDERKAGAATAPDFKAVLQRLIDSRLLIMEA 128
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ G+ V ++ Q + + + ++ ++ + V+
Sbjct: 129 REMGLDEAP-EVKEQLTVF---KDVTLRQTLQQQVTQDVKPDALE----VERVYKESVRR 180
Query: 151 -DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESR 209
E + A K + L + ++
Sbjct: 181 WKVRSLLFQKEEDAAAVKPALAGGKGFVELAKQLV------------------------- 215
Query: 210 LRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269
A K + S + L L + + T P QKG
Sbjct: 216 -------------AEKKAEGSGEPEVLPPDQTLPVVTTALQRLQKGQATPPLKLQKGFAI 262
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL-RSNAIIH 315
+ + D + A +A + + + + K+L R I
Sbjct: 263 LYVEDI-VYPDDPAKRAEAEKASVDRQSGQVLTAFRKELDRKYVKID 308
>gi|255067238|ref|ZP_05319093.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
gi|255048606|gb|EET44070.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
Length = 287
Score = 39.3 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 94/309 (30%), Gaps = 44/309 (14%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
LI + +VS A + T+NG+ I I ++A L+ +EL
Sbjct: 6 LISMLMTALVSGSLSAQT---LVTVNGQTIDSSVIDAQVAALRAANNKIPDSPELRRELT 62
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL-SAEDFSSFLDKQGIGDN-------- 132
+ +N Q A+ L + +F L+
Sbjct: 63 ERQV----------------INTVVSQEAKRLKLDQSAEFKQALEHARTDAKKQGADKKA 106
Query: 133 HFKQYLAI--QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIP 188
HFK A + + + E ++ N +E + ++
Sbjct: 107 HFKTEWAAFESDLLGQAYAIHVLRQNPVQEKDVKTAYDNFSNFYKGTQEVQLGEIITRTQ 166
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN 248
+ + + + A + ++ K A I + L+ + P +
Sbjct: 167 ADAQKAISDLNAKKSFASVLK---QYSIDERAKQAGGIQQGYV--PLKDLQEAVPPLYAA 221
Query: 249 LLKKSQN-NTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYV 305
+ + +TT P + D+RD+ K+ ++ +++++ +
Sbjct: 222 VKDLKKGAHTTTPLQDSDVYAVFYVNDRRDVKLPSYDESKSSIAQDLQASRVDEA----L 277
Query: 306 KKLRSNAII 314
+ L A I
Sbjct: 278 QSLLQKATI 286
>gi|152996616|ref|YP_001341451.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp.
MWYL1]
gi|150837540|gb|ABR71516.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Marinomonas sp.
MWYL1]
Length = 92
Score = 39.3 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 197 FVQKRIKDAEESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKK 252
+ K +AE +L+L K + ++F++ G + D+ P F + +
Sbjct: 9 ILVKTKVEAESLKLKLDKGADFHKLAKQFSTCPSGKKGGDLGEFRKGDMVPAFDKAVFGG 68
Query: 253 SQNNTTNPYVTQKGVEYIAI 272
P TQ G I +
Sbjct: 69 PLYKIQGPVKTQFGFHLIKV 88
>gi|21241842|ref|NP_641424.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
gi|21107222|gb|AAM35960.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 656
Score = 39.3 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 13/93 (13%)
Query: 52 TDGDISKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVN 103
T + R+ + Q + + +L+ E + + E +GI TV
Sbjct: 77 TRFE-QARMQERQRQGEKFDPRSFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDATVR 135
Query: 104 YFFVQHAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ + S + + + L + G
Sbjct: 136 DYIANIPAFQVDGKFSPDQYRAALAQ-GTPPRT 167
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 6/141 (4%)
Query: 166 NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+K + + + L +L S + + K K A E++ D L K S+
Sbjct: 277 EDEKARFVEPEQRLASHILISAGTDAAAQKAAEAKAAKLAAEAKQT-GTDFAALAKANSQ 335
Query: 226 IHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
+ G ++ + + F++ L P ++ G I + + + G+
Sbjct: 336 DPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGEVVGPIKSEFGYHVIQLREVKGGQGKS 395
Query: 283 ALKAYLSAQNTPTKIEKHEAE 303
+ + Q +++ +
Sbjct: 396 FEQ--VRDQLAAEQLKADADK 414
>gi|325927445|ref|ZP_08188692.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans
91-118]
gi|325542195|gb|EGD13690.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas perforans
91-118]
Length = 656
Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 21/168 (12%)
Query: 51 ITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKSGITF 97
I+ D R ++Q+ + EK + +L+ E + + E +GI
Sbjct: 70 ISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVI 129
Query: 98 DSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNHFKQY--LAIQSIWPDVVKNDF 152
TV + + S + + + L + G Q+ L S+ V+
Sbjct: 130 GDATVRDYIANIPAFQVDGKFSPDQYRAALAQ-GTPPRTPAQFDALVRDSLQQSVIPQAV 188
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ E + M R+ + + D + +++
Sbjct: 189 AESGFATKSEFERLLKLM--GETRDVELAMLPPPAADTAPVSDAQIKQ 234
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 76/277 (27%), Gaps = 30/277 (10%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED 119
I L +++ G+ + +L E LK + V+ +
Sbjct: 383 IQLREVKGGQGKSFEQVRDQLAAEQLKADADKAF-ADVSGKLVDQVYKN--------PTA 433
Query: 120 FSSFLDKQGIGDNHFKQYLAIQS----IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
+ G+ + + P V++ F + V
Sbjct: 434 LEPAAKQVGLPVQTLGPFSRSDASGVAANPAVLRAAFSETLVQDGTVSDPITIAPNHSVV 493
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
T ++P +K++++ R AE+ + + ++ +
Sbjct: 494 LRVTNHTAEQALPLDKVRDKVTAAIRADRAEKVAAAAADALLARLQKGETLQALADSEKL 553
Query: 236 YLLESDLHPQFQNLLKKSQNNT--TNPYVTQK----------GVEYIAICDKRDLGGEIA 283
+ + P+ + + N + P T+ G + + G++
Sbjct: 554 QVQPIPVLPRTAPIPTPAANRAIFSAPRPTEGKPSVGKVELDGGRFAVFVISKATPGDLK 613
Query: 284 L-----KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ L Q + YVK++R I
Sbjct: 614 QMPAEQQTMLREQLSQIDGNNAAQAYVKEMRKRYKIQ 650
Score = 36.9 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGEVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + Q +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADADK 414
>gi|104781902|ref|YP_608400.1| peptidylprolyl isomerase [Pseudomonas entomophila L48]
gi|95110889|emb|CAK15605.1| putative Peptidylprolyl isomerase [Pseudomonas entomophila L48]
Length = 318
Score = 39.3 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 17/163 (10%), Positives = 53/163 (32%), Gaps = 9/163 (5%)
Query: 158 NLEMEIPANKQKMKNITV--REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+ + K Y + + + + ++ V+K+ + + D
Sbjct: 142 PSDAELKQAYEAGKAGLQLPARYRLSQIFLRVEN--PKDDEAVRKQAQALAKQAQASDAD 199
Query: 216 CNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI 272
L + S+ + G + L P+ + ++ + + P + G + +
Sbjct: 200 FAALAREHSQDAGTAANGGDTGLQALAQLLPEVRGVVSRLKAGTVSEPVQSAAGYHIVKL 259
Query: 273 CDKRDLGGEIALKAYLSAQ--NTPTKIEKHEAEYVKKLRSNAI 313
+++ + + + E+ YV+ + +A
Sbjct: 260 VEQQPARAATFDEVAPRLRQLLRAQRQEQVAKAYVEGMFDSAT 302
>gi|71276515|ref|ZP_00652790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Dixon]
gi|71901997|ref|ZP_00684044.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
gi|170729736|ref|YP_001775169.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12]
gi|71162692|gb|EAO12419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Dixon]
gi|71728242|gb|EAO30426.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
gi|167964529|gb|ACA11539.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12]
Length = 655
Score = 39.3 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 51/173 (29%), Gaps = 12/173 (6%)
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + E + + + + +L + + + K K EE
Sbjct: 258 AAHLPRPTPSEAVLRKRYDAQQRGEAQNEQRKAAHILITAGADAASQKVAEAKAAKLVEE 317
Query: 208 SRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
+R + D L + S+ + G ++ + F++ L P T+
Sbjct: 318 AR-KPGADFAALARINSQDPGSKDAGGDLGWVQRGMMVKPFEDALFAMKVGEVVGPIKTE 376
Query: 265 KGVEYIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + + + L A + ++ + + + L N
Sbjct: 377 FGNHVIKLEEIKAAKQLPFEAVRDQLAAEQTKEDLDKEFNDVTGKLMDLLVKN 429
>gi|289579341|ref|YP_003477968.1| hypothetical protein Thit_2193 [Thermoanaerobacter italicus Ab9]
gi|289529054|gb|ADD03406.1| hypothetical protein Thit_2193 [Thermoanaerobacter italicus Ab9]
Length = 240
Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 21/88 (23%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQK----------INGEL-----------EKIAVQEL 80
I + IT DI +I K QK N L K + +L
Sbjct: 48 IIAKVGNTKITKEDIEMQILFNKFQKEVLNRKLSELQNSNLNINSFLSVDVSRKDILNKL 107
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQ 108
I E + +E ++ G+ + F
Sbjct: 108 IDEAILYEEAQRQGLNVTYDDAKKFMEN 135
>gi|156049433|ref|XP_001590683.1| hypothetical protein SS1G_08423 [Sclerotinia sclerotiorum 1980]
gi|154692822|gb|EDN92560.1| hypothetical protein SS1G_08423 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 359
Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
Q+ + K +QEL L++ E++ GI + + + A S L
Sbjct: 17 QRRSRARRKEYLQEL-EARLRQCELQ--GIEAS-SEIQMAARRVADENK----KLRSLLA 68
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+QG+G + + YL Q D++ + ++ Q K
Sbjct: 69 QQGVGSDIVESYL--QMSSEDLMISGQYASESTSVQQLEHLLQARKA 113
>gi|21221540|ref|NP_627319.1| lipoprotein [Streptomyces coelicolor A3(2)]
gi|256787270|ref|ZP_05525701.1| lipoprotein [Streptomyces lividans TK24]
gi|289771165|ref|ZP_06530543.1| lipoprotein [Streptomyces lividans TK24]
gi|10241784|emb|CAC09542.1| putative lipoprotein [Streptomyces coelicolor A3(2)]
gi|289701364|gb|EFD68793.1| lipoprotein [Streptomyces lividans TK24]
Length = 215
Score = 39.3 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 39/116 (33%), Gaps = 17/116 (14%)
Query: 43 RTTINGEVITDGDISKRIALLK---------------LQKINGELEKIAVQELIVETLKK 87
+ + IT + R+ ++ + G L + + ++++ +
Sbjct: 34 AAVVGDQRITVAQLENRVDEVREAQRAAVPDDTQYQQVVARTGTLTRDTLHGMVLDRVLH 93
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF-LDKQGIGDNHFKQYLAIQS 142
+ + +G+T V + + G E + L + G+ + L +Q
Sbjct: 94 RAAQDAGVTVSRKEVQDMRGELEKQAG-GPEQLETVWLQQYGVAPDRLDDNLLVQI 148
>gi|298387000|ref|ZP_06996554.1| membrane protein [Bacteroides sp. 1_1_14]
gi|298260150|gb|EFI03020.1| membrane protein [Bacteroides sp. 1_1_14]
Length = 330
Score = 39.3 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 41 RIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
I +N E I D+S+ L L + E++ + +LI + L +E +K +T +
Sbjct: 23 EIVAEVNDETILLSDLSEASKQELFDLLNMAYEIKSKVLDDLIKKKLLDKEAKKQNMTAE 82
Query: 99 S 99
Sbjct: 83 Q 83
>gi|300362246|ref|ZP_07058422.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
gi|300353237|gb|EFJ69109.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
Length = 791
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 14/193 (7%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEI----EKSGITFDSNTVNYFF 106
+ D+ K +L+ I G+ A I L E +S + + + +N
Sbjct: 470 MEFDLKKLAPTYRLRIGIPGQSNAFA----IAHQLGMNEAVVDKARSLMNDEDSDINKMI 525
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ T +AE L + K+ L W + + K E+ A
Sbjct: 526 ERLTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKSQEKADEMLAK 584
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K+K + + + +++ ++ + + R NK+ + K
Sbjct: 585 KRKQAEKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLANNKVLQREKKR 640
Query: 227 HDVSIGKAQYLLE 239
HDVS+G +L
Sbjct: 641 HDVSVGDNVKVLS 653
>gi|306827235|ref|ZP_07460523.1| phage endopeptidase [Streptococcus pyogenes ATCC 10782]
gi|304430592|gb|EFM33613.1| phage endopeptidase [Streptococcus pyogenes ATCC 10782]
Length = 683
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 34/188 (18%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS--NTVNY-------FFVQHARNTGL 115
+Q K AVQ +I E+L + I G+ F + + R L
Sbjct: 376 VQNREAMSRKEAVQNMIDESL--ETITGLGVNFQEFLQDIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
++F ++++G+ N K+ + V + E+ ++ +KN+ +
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK-------EVDER-------TDKELDEFRETLKNLAL 479
Query: 176 REYLIRTV-----LFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDV 229
E I+ + + IP K K + +E SRL + ++ +
Sbjct: 480 PEEAIKKITDAIKVDDIPSIKQSFDDLKNKVSETSETSRLNAEIIGTDGKTRYNKNLL-- 537
Query: 230 SIGKAQYL 237
+G +
Sbjct: 538 -VGDPNRV 544
>gi|238020925|ref|ZP_04601351.1| hypothetical protein GCWU000324_00822 [Kingella oralis ATCC 51147]
gi|237867905|gb|EEP68911.1| hypothetical protein GCWU000324_00822 [Kingella oralis ATCC 51147]
Length = 290
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 92/280 (32%), Gaps = 19/280 (6%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKING-----ELEKIAVQELIVETLKKQEIEKSG 94
++ T+NG I ++ +R+ + EL + Q+ ++ET+ Q +K G
Sbjct: 21 AQTVVTVNGTKIDSSELDRRVQAVVAGSQGQVQDSPELRQFIAQQTVLETVVTQAAKKQG 80
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + + D + +Q L +Q DV+ +
Sbjct: 81 LDKSKEYKDAESESM-KQAKAQGADKQADFKQQWADYQ---NQLLMQVYARDVINKN--- 133
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ +++ N+ K + E I ++ + + ++ + AE +R +
Sbjct: 134 PVTDAQVQQRYNEIKQRYDNTDEVQIGEIITDNAEQIKAAERDLKAKKSFAEVAR-KYSI 192
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD 274
D N A +S+ + +Q + + + P K I D
Sbjct: 193 DPNIKAGGAVFSDYISLRDL----QEARPNIYQAIGSLKKGQYSKPISGDKLHAVYYIND 248
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
KR + E K + + E V L NA I
Sbjct: 249 KRKISIEPLDK--IKEGLRAGLANERVQEAVGNLMQNASI 286
>gi|222616232|gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
Length = 1102
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 19/211 (9%), Positives = 57/211 (27%), Gaps = 38/211 (18%)
Query: 57 SKRIALLKLQKINGELEKIA-------------------VQELIVETLKKQEIEKSGITF 97
+R++ + Q+ +G +A +E+I + + Q+ +
Sbjct: 248 ERRMSTIHGQQKSGVARNLAFRGAGSASSSSSKQGKGKSREEIIPDRVDAQDGFEGREDV 307
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-------- 149
V+ N +S E+ + G+ + Q ++V
Sbjct: 308 GDGVVDELLASQTSNLNMSGENMVQKGEPVGMEEEQ-----RHQLSTSNLVSDTDMILAI 362
Query: 150 ------NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
F + + + + ++ + ++ L + Q +
Sbjct: 363 QNLQQPASFGGESSEDISDTNRKRVQPQSGSKISDRVQQALVLYGQGSGREQAKQVDPKE 422
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKA 234
A + + +E + ++
Sbjct: 423 PARALKRFRKTEVESMEVLEATSPGATVRDL 453
>gi|154148500|ref|YP_001406386.1| putative peptidyl-prolyl cis-trans isomerase D-like protein
[Campylobacter hominis ATCC BAA-381]
gi|153804509|gb|ABS51516.1| putative peptidyl-prolyl cis-trans isomerase D-like protein
[Campylobacter hominis ATCC BAA-381]
Length = 487
Score = 39.3 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 5/130 (3%)
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF---VQHARNTGLSA 117
Q L+++A+ LI + + + GI V + S
Sbjct: 75 KFTDEQAKKMHLDEMAINALIQDAILLNFAKDLGINASDEEVAREIINSDNFKTDGKFSK 134
Query: 118 EDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN-DFMLKYGNLEMEIPAN-KQKMKNITV 175
+ + + + G+ N +++ L I + K ++EM + Q I +
Sbjct: 135 KLYENAMKNAGLSQNEYEKELKKVIILDKLKKAISIKPNADDIEMLTASEFMQDKVEIAI 194
Query: 176 REYLIRTVLF 185
+ + T+ F
Sbjct: 195 VDQNVSTITF 204
>gi|220932331|ref|YP_002509239.1| trigger factor [Halothermothrix orenii H 168]
gi|254789005|sp|B8CY75|TIG_HALOH RecName: Full=Trigger factor; Short=TF
gi|219993641|gb|ACL70244.1| trigger factor [Halothermothrix orenii H 168]
Length = 429
Score = 39.3 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ E EK A L++E + K+E GI ++ + A++ E ++L
Sbjct: 347 ENREEAEKRAKSNLVLEAIGKKE----GIEVTDEEIDNKIEEIAKDGEQKPEQIKAYLQL 402
Query: 127 QG 128
QG
Sbjct: 403 QG 404
>gi|239930810|ref|ZP_04687763.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
gi|291439175|ref|ZP_06578565.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
gi|291342070|gb|EFE69026.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
Length = 215
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 39/115 (33%), Gaps = 15/115 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKI---------------NGELEKIAVQELIVETLKK 87
+ + IT + R++ ++ + G L + + ++++ + +
Sbjct: 34 AAVVGDQRITVSQLEDRVSEVRAAQRAAVPDEAQYAQAIARTGSLTRDTLHGMVLDRVLQ 93
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+G+T + G + +++L + G+ + L +Q
Sbjct: 94 HAARDAGVTVTPREIQQMRSGLEEQAGGAEALEAAWLQQYGVPPQRLDENLRLQL 148
>gi|227888700|ref|ZP_04006505.1| MutS family DNA mismatch repair protein [Lactobacillus johnsonii
ATCC 33200]
gi|227850727|gb|EEJ60813.1| MutS family DNA mismatch repair protein [Lactobacillus johnsonii
ATCC 33200]
Length = 788
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 71/191 (37%), Gaps = 10/191 (5%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAV-QEL-IVETLKKQEIEKSGITFDSNTVNYFFVQ 108
+ D+ K +L+ I G+ A+ +L + ET+ + +S + + + +N +
Sbjct: 467 MEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNETVVNKA--RSLMNDEDSDINKMIER 524
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
T +AE L + K+ L W + + K E+ A K+
Sbjct: 525 LTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKR 583
Query: 169 KMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD 228
+ + + + + +++ ++ + + R NK+ + + HD
Sbjct: 584 QKADKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLAQNKVLQREKRRHD 639
Query: 229 VSIGKAQYLLE 239
VS+G +L
Sbjct: 640 VSVGDTVKVLS 650
>gi|239618053|ref|YP_002941375.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia
TBF 19.5.1]
gi|239506884|gb|ACR80371.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Kosmotoga olearia
TBF 19.5.1]
Length = 616
Score = 38.9 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 63/213 (29%), Gaps = 14/213 (6%)
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK----YGNLEMEIPANKQKMK 171
+ + L + I D + L + + + +++ L +
Sbjct: 107 QVQQITDELVSRYISDETTRAQL--EMYYGSIENFRKVVEDIVFVRTLSQNVFNAIVPDY 164
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFV----QKRIKDAEESRLRLPKDCNKLEKFAS--K 225
+ + EY + + + N + + + +E L + K S +
Sbjct: 165 DASATEYFEKNKTDIKNEYESVNAAHILVSTEASAMELKEKILLGELSFEEAAKRYSLDQ 224
Query: 226 IHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G L + +F+ + P T G I + K L
Sbjct: 225 YSAQQGGNIGELKHGTVILEFEEAAFAATPGEIVGPVKTDYGYHLIKVNSKTTFDSYEDL 284
Query: 285 KAYLSAQNTPTKIEKHE-AEYVKKLRSNAIIHY 316
K + ++ ++ E ++ K R + IHY
Sbjct: 285 KNSKAYEDIMSRFENEAFLGWITKYRQDKKIHY 317
>gi|89100857|ref|ZP_01173708.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911]
gi|89084443|gb|EAR63593.1| post-translocation molecular chaperone [Bacillus sp. NRRL B-14911]
Length = 289
Score = 38.9 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 70/263 (26%), Gaps = 36/263 (13%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + I + SS + IT ++ + ++
Sbjct: 1 MKKWMLSLSIAAGVIGLSACSSNAEDSSEVVVETKAGDITKDELYNAM--------KDKV 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-GD 131
+ A+QEL+ KK EK +N + + G +F L + G +
Sbjct: 53 GEQAIQELV---YKKVLSEKY--KVTDEELNEKIDELKQQLG---ANFEMALAQYGYEDE 104
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
K+ + D ++ K E R +L
Sbjct: 105 EDLKETFKTGLLQEKAAIKDVEATEKEVKEYYDNYK--------PEIKARHILV------ 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-L 250
K +K + + + + + G + + P+F+
Sbjct: 151 --EDEKTAKEVKKKLDEGAKFEDLATEYSQDPGSA--ANGGDLGWFGAGKMVPEFEEAAY 206
Query: 251 KKSQNNTTNPYVTQKGVEYIAIC 273
N + P T+ G I
Sbjct: 207 ALDVNEISEPVKTEHGYHIIQTT 229
>gi|328957038|ref|YP_004374424.1| foldase protein PrsA [Carnobacterium sp. 17-4]
gi|328673362|gb|AEB29408.1| foldase protein PrsA [Carnobacterium sp. 17-4]
Length = 333
Score = 38.9 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 87/283 (30%), Gaps = 33/283 (11%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ + S + IT+ + + + L+++ +++++
Sbjct: 4 LLLATATILAGLTIAGCSDSTVASSTAGKITEDEFYEAMKETV---GTSMLQQLIIEDVL 60
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ G V+ + T AE F + +QG ++K + +
Sbjct: 61 TDL--------YGDKVTDEVVDKQYA-TEEETYGGAEAFEYIMLQQGYTAENYKDTIRLN 111
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ + VK K E EI A + V +L +++ + + +
Sbjct: 112 LLIEEAVK----DKTEFTEEEIQAAY----DAYVPPVTAAHILV---EDEETAKDLITQI 160
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN- 259
A+ + L + G ++ P+F+ + T
Sbjct: 161 NDGADFAELATENSVDTAT--------APNGGEITFSSGEMVPEFEEAAYALEEGEMTTE 212
Query: 260 PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
P ++ G I + +K + G + Q K+ A
Sbjct: 213 PVASEYGFHVIKMIEKPEKGTLEEETDTIKDQLLTAKLADSAA 255
>gi|298506530|gb|ADI85253.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length = 572
Score = 38.9 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 76/292 (26%), Gaps = 67/292 (22%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKLQKINGELEKIAVQ 78
+ I V S + T+N E IT D++ + +++ ++ +
Sbjct: 42 VMTIRVKVPLFSPLFAEFPVATVNDEPITVNDLNASLETVHEGMMEGKQAPRRNFTDILN 101
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I L QE G+ D + FS L ++ + +H K +
Sbjct: 102 RIITSKLIIQEGRNIGL--DQQE----------QPKEMIDTFSRKLLRELVLKDHVKD-I 148
Query: 139 AIQSIWPDVVKNDFML-------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
P V+ + + E A K + + +
Sbjct: 149 RPD---PKEVEKRYGQLNVEWTFSTLTFKNEEDAKKARKALDKGTSF-----------DA 194
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
L + +KR + + +L+ +HP ++
Sbjct: 195 LVAEEVKEKRAEAKQNEKLKY---------------------------EHIHPDIVKIID 227
Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ QKG + + T + + E
Sbjct: 228 SLKPGSVGPVIDMQKGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEK 279
>gi|304315629|ref|YP_003850774.1| hypothetical protein Tthe_0101 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777131|gb|ADL67690.1| conserved hypothetical protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 241
Score = 38.9 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 28/101 (27%), Gaps = 12/101 (11%)
Query: 42 IRTTINGEVITDGDISKRIALLKLQKIN-GELEKIAVQELIVETLKKQEIEKSGITFDSN 100
I +N I + R L ++ + +L+ E +++ + +
Sbjct: 66 IIAKVNNIPIYKSEFELRKGLTLASDAEISNIDNYILNKLVREKVEEHLASSYNLKVSQD 125
Query: 101 TVN-------YFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+N F + + + G+ +
Sbjct: 126 EINLYIEKEKKEFADYPEANQM----LQEMISASGMTSEEY 162
>gi|195620008|gb|ACG31834.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Zea mays]
Length = 151
Score = 38.9 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIAICDKR 276
++++ G + + FQ + + + P+ + G +I +C+ R
Sbjct: 92 AQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPEGTVSAPFKSTHGYHFI-LCEGR 149
>gi|310639535|ref|YP_003944293.1| ppic-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
polymyxa SC2]
gi|309244485|gb|ADO54052.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
polymyxa SC2]
Length = 316
Score = 38.9 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 76/247 (30%), Gaps = 28/247 (11%)
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+++ + E ++ GI + Q ++ F + G+
Sbjct: 74 QMLNRKAVQAEAKRLGIKITQEDLQQVLEQDSKGYDSEHAYFEEMQRQFGLNP------- 126
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
V +Y +I +++ + EY + +++
Sbjct: 127 ---------VDLRNEAEYRIGLEKIATQGIQVEETEIDEYWEQHPEEFAVGKQIKLAAIY 177
Query: 199 QKRIKDAEES--RLRLPKDCNKLEKFASKIHDVSI----GKAQYLLESD-LHPQ--FQNL 249
+ ++AE R++ + + L + S + G+ +L E D P+ +
Sbjct: 178 VAKAEEAETLLDRVKQGESFDMLLREHSVSGNPLGEDHSGQLGWLDEYDPFQPEAVMKAA 237
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
+ S + P G I + D R K + Q + + +A + ++
Sbjct: 238 RELSSGDVAGPISVNDGYAVIYVQDVR--LKNSPDKQQIRQQIRRS-LALAQAAPLDEVE 294
Query: 310 SNAIIHY 316
+ Y
Sbjct: 295 KSLRDKY 301
>gi|296535271|ref|ZP_06897478.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296264392|gb|EFH10810.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 507
Score = 38.9 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 52/373 (13%), Positives = 103/373 (27%), Gaps = 87/373 (23%)
Query: 12 FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKIN 69
F K+L VL F + I S + + I + + R + ++Q+
Sbjct: 13 FAKILFALLVLS-FAVWGIEDIVRQFGSDTSVARVGRDAIEVPEAQAAARREIGRVQRQL 71
Query: 70 G-----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY-------------- 104
G L + AV+ L++E +++QE G+ V
Sbjct: 72 GGSFEITPEMGEALTRQAVEGLVMERVQRQEARHLGLAVPEAAVRDYVWGIPAFQGPDGR 131
Query: 105 ----FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ-----------SIWPD--- 146
F RN LS +F + L + + + W
Sbjct: 132 FNRIAFDSFLRNNQLSEGEFLTLL-RADLERQQMVGAVRAGAAGPDALTRPLLAWEREQR 190
Query: 147 ---VVKNDFMLKYGNLEMEIPANKQ----KMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+V+ F E ++ + EY T+ P+ + + +
Sbjct: 191 LAEIVRLPFSAAPEPAAPEEAQLRRFHENNADRFSAPEYRRVTLAVLSPETVMGDVQATE 250
Query: 200 KRIKDA-EESRLRLPK------------DCNKLEKFASKIHDVS---------------- 230
+ ++ A E R + D K E A + + +
Sbjct: 251 EELRAAYEAHRDHYERPERRSLQQALLPDRAKAEALARQWREGADFAAITQAAEAAGGQA 310
Query: 231 --IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
+G++ L + Q + P + G + + G + +A
Sbjct: 311 TELGESDRAGLP-LPELAEAAFTLPQGGVSEPVQSPFGWHVVHVTAI-AAGEDRGFEAVR 368
Query: 289 SAQNTPTKIEKHE 301
K E+
Sbjct: 369 PEVEAQVKRERAA 381
>gi|329894935|ref|ZP_08270734.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium
IMCC3088]
gi|328922664|gb|EGG29999.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium
IMCC3088]
Length = 624
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 6/156 (3%)
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
F+ ++ ++ E + +L + +RI+ A+ +
Sbjct: 240 FVEPVAEADLRAAYEQEISSYAYQDEARVSHILLI--QGDDEADEAYAQRIQSAQTALTD 297
Query: 212 LPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLK-KSQNNTTNPYVTQKGVEY 269
E+ + I S G Y + + +K N + P +T G
Sbjct: 298 GEAFSVVAERLSDDIGSSSDGGDLGYTAGDVFPAEMEEAIKGLDINEVSGPVLTDAGTHL 357
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
I + D+R E + ++ + + +
Sbjct: 358 ITVTDRR--SSEPPSFMEMRSELEASLSQADAQRRL 391
>gi|296313658|ref|ZP_06863599.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
polysaccharea ATCC 43768]
gi|296839799|gb|EFH23737.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
polysaccharea ATCC 43768]
Length = 512
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 8/167 (4%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V S + E I+D I+ + +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGSDYIVQVGDEKISDHSINVTMQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
Q L+ KQ + GI+ + V H S
Sbjct: 60 QAAGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSQEQIKQIIVDDPNFHDAGGKFSHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
S +L ++ + ++ F + + Q ++V +++ G L + A +
Sbjct: 120 SQYLSQRHMSEDQFVEEIRDQFALQNLVN---LVQNGVLVSDTQAEQ 163
>gi|237755492|ref|ZP_04584114.1| trigger factor [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692356|gb|EEP61342.1| trigger factor [Sulfurihydrogenibium yellowstonense SS-5]
Length = 437
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ G L A+ + V + + EK GIT ++ + A++ +S D +L
Sbjct: 328 IEAAEGNLTITAINNVRVMLILSKIAEKEGITVSDEELDAQISKLAQSYNVSFADMREYL 387
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
++G+ K +A Q +V+ + + E+E KQ+ K
Sbjct: 388 IQKGM-LEGIKSDIARQKALDILVEKANIKEISKEELE-AREKQENKE 433
>gi|254367995|ref|ZP_04984015.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica 257]
gi|134253805|gb|EBA52899.1| peptidyl-prolyl cis-trans isomerase [Francisella tularensis subsp.
holarctica 257]
Length = 92
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLK 251
Q++ Q+ KD E ++ K + G + + P+F + +
Sbjct: 11 QSEYECQQIKKDITEGKITFE---EAARKHSLCPSGARGGDLGTFSQGQMVPEFDRVVFN 67
Query: 252 KSQNNTTNPYVTQKGVEYIAICDK 275
+ P TQ G + I +
Sbjct: 68 DELHKVHGPVQTQFGYHLLEITSR 91
>gi|121606645|ref|YP_983974.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
gi|120595614|gb|ABM39053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Polaromonas
naphthalenivorans CJ2]
Length = 282
Score = 38.9 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 22/152 (14%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD----VS 230
+ +R +LF++ + + E +R + + A+++ +
Sbjct: 119 GQALHVRHILFAVTPGVNVHALTIHAEKALLELTRK--DASPERFVQLAAELSNCPTSAQ 176
Query: 231 IGKAQYLLESDLHPQFQNLL---KKSQ---NNTTNPYVTQKGVEYIAICDKRDLGGEIAL 284
G ++ D P+ N L K SQ T+ G I + ++R G+
Sbjct: 177 GGDLGWVGPDDCAPELANELFHQKHSQWGMGVHPRLIHTRFGFHIIEVLNRR--AGKTPA 234
Query: 285 KAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
A + + T + R+ A+ Y
Sbjct: 235 YAEVRERI-ATLLAVQS-------RARALHQY 258
>gi|15644452|ref|NP_229504.1| hypothetical protein TM1704 [Thermotoga maritima MSB8]
gi|4982281|gb|AAD36771.1|AE001810_10 hypothetical protein TM_1704 [Thermotoga maritima MSB8]
Length = 581
Score = 38.9 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 74/251 (29%), Gaps = 29/251 (11%)
Query: 77 VQELIVETLKKQE-----IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI-- 129
++ LI + +Q+ EK+ I + + + G
Sbjct: 95 LKALIADVFLQQKVVLYYAEKNNIKPSKKEIEQEVNNVIQTIKNDQNQLNRIERMYGSLS 154
Query: 130 --GDNHFKQYLAIQSIWPDVVKNDFMLKYG-NLEMEIPANKQKMKNITVREYLIRTVLFS 186
N+ + + +Q V K G E EI ++ K ++Y +
Sbjct: 155 NYEKNYLEPQIRVQLTIKKV-----QEKVGVVTEDEIKKYFEENKEDLQKQYDRVDIEAV 209
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
D+ Q F+ K S + + + + + + G + ++
Sbjct: 210 SFDSSSTAQEFIAK------ASEMGFDEAASSMNVTVQPFSNATRG----IFPDEIDTAL 259
Query: 247 QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE-AEYV 305
+ + P+ + L A + + TK+E+ + +++
Sbjct: 260 ---FSATPGSIVGPFYFLDQWYVFRVKTSSVLTDFNAFSNSDAYSDVKTKLEQEKFQKWL 316
Query: 306 KKLRSNAIIHY 316
++ + Y
Sbjct: 317 EEFMKEENLSY 327
>gi|241896492|ref|ZP_04783788.1| peptidylprolyl isomerase [Weissella paramesenteroides ATCC 33313]
gi|241870214|gb|EER73965.1| peptidylprolyl isomerase [Weissella paramesenteroides ATCC 33313]
Length = 353
Score = 38.9 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 97/295 (32%), Gaps = 41/295 (13%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + ++ I V +W + + T + G++S+ KL+ +++
Sbjct: 1 MWKKVLGVLVVIAAGVGLAAWGIGPKSLVTTD-----AGNVSQAEYYKKLKSSPEGQKEL 55
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A +I++ + +K G ++ + G FS L + G+ ++ F+
Sbjct: 56 A--NMIIQKVLD---KKYGDKVSKKSIESQYNDAKSQYG---SQFSQVLSQNGMTEDSFR 107
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
L IQ++ V D + K + + +L S D+ +
Sbjct: 108 DSLRIQALEKQAVIAD--------KHYSNKQLHKAYKEYQPKVSVSVILTSSEDDAKKII 159
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESD--LHPQFQN-LL 250
+ K D KL K S + + GK +D L F+
Sbjct: 160 AQLDK------------GGDFAKLAKEKSIDTNTKKNGGKMTSFDSTDTNLEDDFKTAAF 207
Query: 251 KKSQNNTTNPYV---TQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
K + T V + +G I + K D ALK+ + + +
Sbjct: 208 KLKKGEYTKTPVKSTSSQGYFIIKMNSKSDKKSFSALKSKMKSILVEKTMSDTTE 262
>gi|188996271|ref|YP_001930522.1| trigger factor [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931338|gb|ACD65968.1| trigger factor [Sulfurihydrogenibium sp. YO3AOP1]
Length = 440
Score = 38.9 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ G L A+ + V + + EK GIT ++ + A++ +S D +L
Sbjct: 328 IEAAEGNLTITAINNVRVMLILSKIAEKEGITVSDEELDAQISKLAQSYNVSFADMREYL 387
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
++G+ K +A Q +V+ + + E+E KQ+ K +
Sbjct: 388 IQKGM-LEGIKSDIARQKALDILVEKANIKEISKEELE-AREKQENKESKEEQ 438
>gi|88803462|ref|ZP_01118988.1| PPIC-type PPIASE domain protein [Polaribacter irgensii 23-P]
gi|88781028|gb|EAR12207.1| PPIC-type PPIASE domain protein [Polaribacter irgensii 23-P]
Length = 544
Score = 38.9 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 81/275 (29%), Gaps = 50/275 (18%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ + I F I + + + TIN E IT + KRI L I+ + K
Sbjct: 1 MKKIVLSICFLI---FVLNLSSQNKKTLVTINNE-ITTVEDFKRIYEKNLDAIDSKEAKS 56
Query: 76 AVQEL---IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ L I LK E + +
Sbjct: 57 VKKNLTLYIDYRLKVAEAYHLKL------------------------------------D 80
Query: 133 HFKQYLA-IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ Y I+ ++ ++ + + + L+RT ++P +
Sbjct: 81 TLRSYQKEIKMYREQLMAPYLQDTTFISDLVKEIYFRTTNEVKAKHILVRTSEDAVPRDT 140
Query: 192 L----QNQGFVQKRIKDAEESRLRLPKDCN-KLEKFASKIHDVSIGKAQYLLESDLHPQF 246
L + + I + + + + + + G Y + F
Sbjct: 141 LIAYNKITAIRNRIINGEDFEAVAVAVSEDVSAQDDPRSGRKGNKGDLGYFDAFKMVSSF 200
Query: 247 QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG 280
+++ ++ ++P+ TQ G + + D R G
Sbjct: 201 EDVAYTTKIGAVSHPFKTQFGFHILKVDDFRTSKG 235
>gi|86137742|ref|ZP_01056318.1| hypothetical peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
MED193]
gi|85825334|gb|EAQ45533.1| hypothetical peptidyl-prolyl cis-trans isomerase [Roseobacter sp.
MED193]
Length = 266
Score = 38.9 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 80/254 (31%), Gaps = 37/254 (14%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
G + A + + TL QE + G+T + V E L +
Sbjct: 34 KPGIAWRKAANAVALRTLLLQEARRQGLTPEPAEVEPG------RFETDEEALIRGLLEA 87
Query: 128 GIGDNH-FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFS 186
+ + ++ + + W + F + + + +L +
Sbjct: 88 RVEVDAPTEEEVRAE--WARD-PSRFR--------------------SPPLWEVSHILCA 124
Query: 187 IPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI-HDVSIGKAQYLLESDLHPQ 245
+ K+ + PKD L K S S G L D P+
Sbjct: 125 CDPRDKAAKEKALKKANVLNDRLKTNPKDFVALAKTESDCGSKSSGGALGQLGPGDTVPE 184
Query: 246 FQNLL-KKSQNNTTN-PYVTQKGVEYI---AICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
F+ L + T P +++ G + A+ + ++L E A K +S +
Sbjct: 185 FERYLHHLKEGEITPVPVLSRHGYHIVRMDAVAEGQELPFE-AAKRAISMAMEKASWARS 243
Query: 301 EAEYVKKLRSNAII 314
+V++L + A I
Sbjct: 244 AQAFVQELAAGAEI 257
>gi|327311378|ref|YP_004338275.1| reverse gyrase [Thermoproteus uzoniensis 768-20]
gi|326947857|gb|AEA12963.1| reverse gyrase [Thermoproteus uzoniensis 768-20]
Length = 1224
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 23/180 (12%)
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
F++++A Q +VV + L E+ + + EY + +P ++
Sbjct: 1048 FRRFMASQMREAEVVVARYALLLDGFNAEVRRVVEVKNEGFLAEYRSVELEPRLPTGEVD 1107
Query: 194 NQGFVQKRIKD----AEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL 249
+ KR+ + A+ R+ + + +A + +S +
Sbjct: 1108 VEIAYAKRLVELLSQADVLRMMRERGIGRPSTYAKILEVLSRRGYVVV------------ 1155
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS-AQNTPTKIEKHEAEYVKKL 308
+ T++G+E R+ G++ + + +E YV L
Sbjct: 1156 ----RGRRKFMIPTKRGIEIY--RYLRENYGKLVSEERTRLIEKYMDDVENGRKNYVAVL 1209
>gi|210621779|ref|ZP_03292808.1| hypothetical protein CLOHIR_00753 [Clostridium hiranonis DSM 13275]
gi|210154543|gb|EEA85549.1| hypothetical protein CLOHIR_00753 [Clostridium hiranonis DSM 13275]
Length = 427
Score = 38.9 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
L + E + A ++L+ TL EI K I V+ + A + AE+
Sbjct: 340 LNGLKEERREDA-EKLVRGTLVLDEIAKLENIEASEEDVDAEIAKMAEMYKMEAEEMKKA 398
Query: 124 LD 125
L
Sbjct: 399 LR 400
>gi|108808615|ref|YP_652531.1| putative potassium efflux system [Yersinia pestis Antiqua]
gi|108780528|gb|ABG14586.1| putative potassium efflux system [Yersinia pestis Antiqua]
Length = 737
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 19/191 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F + + T ++++ + A +S I + T ++ ++ LL
Sbjct: 26 LFDPFLFCRQTMFTLVIIVLLLFSSTFVFGISAFASGINVDVP----TRSEVQSQLDLLS 81
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
QKI EK+A Q+L IE++ A + L
Sbjct: 82 KQKILSPAEKLAQQDLTQTLEYLDTIERTKQE-------------ANQLKQQLAQAPAKL 128
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVL 184
+ G K A + L + + ++++ Y + +
Sbjct: 129 RQATEGLEALKSSSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSA--YNSQLIA 186
Query: 185 FSIPDNKLQNQ 195
++Q+
Sbjct: 187 LQTQPERVQSA 197
>gi|317129830|ref|YP_004096112.1| trigger factor [Bacillus cellulosilyticus DSM 2522]
gi|315474778|gb|ADU31381.1| trigger factor [Bacillus cellulosilyticus DSM 2522]
Length = 431
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ EK L +E + E + V+ + A SA++ L QG G
Sbjct: 352 DAEKRVRANLTLEAI----AEAENVEVSDEDVDKEIGEMAETYKRSADEIKQILAMQG-G 406
Query: 131 DNHFKQYLAIQSIWPDVVKN 150
N K L ++ +V+N
Sbjct: 407 VNTLKGDLKVRKAIDLLVEN 426
>gi|251778113|ref|ZP_04821033.1| foldase protein PrsA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082428|gb|EES48318.1| foldase protein PrsA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 247
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 74/233 (31%), Gaps = 15/233 (6%)
Query: 93 SGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQY-----LAIQSIWP 145
+G ++ ++ + E L +Q + + + + +
Sbjct: 10 AGNEIKDKDLDAVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKELKIDETEEYK 69
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++V+ L + + + V++Y + + + + K ++A
Sbjct: 70 NLVEGLAKEALTQLAINKVLADVTVTDEDVKKYYDDNASMFVNPPTVSAKHILVKTEEEA 129
Query: 206 EESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
+ + +K+++ G + + P+F+ + + + P
Sbjct: 130 TSIKEEIENGLAFEEAAKKYSTCPSKEQGGSLGNFGKGAMVPEFEKVAFESEVGIVSEPV 189
Query: 262 VTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
TQ G I + DK + + E A L Q + + E +K+L
Sbjct: 190 KTQFGYHLILVEDKAESTTVPFEQVKDAVLR-QLINERQQNKYLEMIKQLSDK 241
>gi|225568850|ref|ZP_03777875.1| hypothetical protein CLOHYLEM_04929 [Clostridium hylemonae DSM
15053]
gi|225162349|gb|EEG74968.1| hypothetical protein CLOHYLEM_04929 [Clostridium hylemonae DSM
15053]
Length = 428
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 71 ELEKIAVQELIVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
E+ A++ I L + I K+ I V+ + A + + + F+ +
Sbjct: 347 EMRPQAIKR-IETRLVLEAIAKAENIEISDEKVDEELAKMAESYKMEVDKLKEFMGEN-- 403
Query: 130 GDNHFKQYLAIQSIWPDVVKN 150
N K+ +A+Q +V+N
Sbjct: 404 EKNQMKEDMAVQEAVTFLVEN 424
>gi|255570207|ref|XP_002526064.1| rotamase, putative [Ricinus communis]
gi|223534645|gb|EEF36341.1| rotamase, putative [Ricinus communis]
Length = 294
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ RE L++ +L + ++ L+ +Q+RI E+ + ++ G
Sbjct: 84 VDGREILVQHLL--VKEDDLKLLVELQQRIAGGEDL-------SDLAVDYSICPSKAEGG 134
Query: 233 KAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
++ + ++ P+F+ + N T+ G + + R+
Sbjct: 135 MLGWVRKGEMVPEFEEAAFNAPLNKVVKCKTKFGWHLLQVLSDREES 181
>gi|223997298|ref|XP_002288322.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975430|gb|EED93758.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 120
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 219 LEKFASKIHDVSIGKAQYLLESDLHPQFQNLL---KKSQNNTTNPYVTQKGVEYIAICDK 275
++++ G + +F +++ + P TQ G I + DK
Sbjct: 54 ASEYSTCPSKARGGSLGSFGPGTMVKEFDDVIFSPETKMGEVVGPVKTQFGYHLIVV-DK 112
Query: 276 RDLGGE 281
R GG+
Sbjct: 113 RTGGGD 118
>gi|218262309|ref|ZP_03476823.1| hypothetical protein PRABACTJOHN_02497 [Parabacteroides johnsonii
DSM 18315]
gi|218223460|gb|EEC96110.1| hypothetical protein PRABACTJOHN_02497 [Parabacteroides johnsonii
DSM 18315]
Length = 532
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+ VL + ++ + + + D +L K S + G+
Sbjct: 237 VAHVLIPFEKDSVKFGEAETLARAEEVYQKAKDGADFAELAKEYSSDAGSAKRGGELPAF 296
Query: 238 LESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
++ F + + P T+ G I + +K+
Sbjct: 297 GVGEMVEPFEVAAFALNTPGELSRPVKTRFGYHIIKLIEKK 337
>gi|188589997|ref|YP_001922502.1| foldase protein PrsA [Clostridium botulinum E3 str. Alaska E43]
gi|188500278|gb|ACD53414.1| foldase protein PrsA [Clostridium botulinum E3 str. Alaska E43]
Length = 247
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 74/233 (31%), Gaps = 15/233 (6%)
Query: 93 SGITFDSNTVNYFFVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQY-----LAIQSIWP 145
+G ++ ++ + E L +Q + + + + +
Sbjct: 10 AGNEIKDKDLDAVLNRYPQERRAMFQGEQGREALLEQVVAFELMRNFGKELKIDETEEYK 69
Query: 146 DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++V+ L + + + V++Y I + + + K ++A
Sbjct: 70 NLVEGLAKEALTQLAINKVLADVTVTDEDVKKYYDDNANMFINPPTVSAKHILVKTEEEA 129
Query: 206 EESRLRLPKDCN---KLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
+ + +K+++ G + + P+F+ + + + P
Sbjct: 130 TSIKEEIANGLAFEEAAKKYSTCPSKEQGGSLGNFGKGAMVPEFEKVAFESEVGIVSEPV 189
Query: 262 VTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
TQ G I + DK + + E A L Q + + E +K+L
Sbjct: 190 KTQFGYHLILVEDKAESTTVPFEQVKDAVLR-QLINERQQNKYLEMIKQLSDK 241
>gi|15966379|ref|NP_386732.1| hypothetical protein SMc02451 [Sinorhizobium meliloti 1021]
gi|307313034|ref|ZP_07592661.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti BL225C]
gi|307321040|ref|ZP_07600446.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti AK83]
gi|15075650|emb|CAC47205.1| Conserved hypothetical protein, contains a peptidyl-prolyl
cis-trans isomerase signature [Sinorhizobium meliloti
1021]
gi|306893315|gb|EFN24095.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti AK83]
gi|306899353|gb|EFN29987.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti BL225C]
Length = 284
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 46/259 (17%)
Query: 39 SSRIRTTINGEVITDGDISKRIALL--KLQKINGEL-EKIAVQELIVETLKKQEIEKSGI 95
+ + + + I ++ I L +LQ++ E A+ +I L ++ EK G+
Sbjct: 26 TDPVIAKVGDQEIRQSELDLAITSLDPQLQRMPDEQKRAAALSAVIDVKLLLKDAEKEGL 85
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
+ F Q R L+ + + FK+++ + ++ + VK +
Sbjct: 86 -----QNDEAFKQ--RVAFLTERELHNAF---------FKKHV-VDAVTSEEVKARY--- 125
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
+ E+ A E R +L D + A+ ++ +
Sbjct: 126 ----DKEVAAI------PPQEEVKARHILVKTEDEAKDVIKELDAGKNFADLAKAKSTD- 174
Query: 216 CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT-NPYVTQKGVEYIAIC 273
+ G Y + + P+F+ + T P TQ G I I
Sbjct: 175 ----------PNKEEGGDLGYFTKGRMVPEFETAAFALEKGAYTKTPVKTQFGFHVILIE 224
Query: 274 DKRDLGGEIALKAYLSAQN 292
DKR + +
Sbjct: 225 DKRPQAPPTLEQVEPQVRQ 243
>gi|312143234|ref|YP_003994680.1| trigger factor [Halanaerobium sp. 'sapolanicus']
gi|311903885|gb|ADQ14326.1| trigger factor [Halanaerobium sp. 'sapolanicus']
Length = 426
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 83 ETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
E L I + GI ++ A AE + QG K + Q
Sbjct: 358 ELLVLDAIAEVEGIEISDEELDEEIENIAEIHDREAEQIKAIFQMQG-QLETLKDDIKRQ 416
>gi|108762810|ref|YP_633122.1| putative lipoprotein [Myxococcus xanthus DK 1622]
gi|108466690|gb|ABF91875.1| putative lipoprotein [Myxococcus xanthus DK 1622]
Length = 361
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 40/237 (16%)
Query: 36 WAMSSRIRTTINGEVITDGDISKRIA--LLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
A + + T +G+ IT ++S+R+ L L+K +L K + ++ E L E +K
Sbjct: 41 PAPDTVVATFGDGQKITYKELSERLQEPLANLEKQKSQLLKRGLDGMVTEKLVDAEAKKR 100
Query: 94 GIT---------------FDSNTVNYFFVQHARN--TGLSAEDFS----SFLDKQGIGDN 132
G++ + + A G + E FL +Q
Sbjct: 101 GLSQEAYLKAEIDDKVPAPTEERIKEVYDGAAGQLPEGSTYEQMKPQIVEFLTQQ----- 155
Query: 133 HFKQYLAIQSIWPDVV-KNDFMLKYGNLEMEIPANKQ-------KMKNITVREYLIRTVL 184
+ Q+++ ++ + L KQ K ++
Sbjct: 156 --PKQERAQALFEELRKSANVKLTLPEPPRPPVVRKQVAATGAAKGGPEGAPVTIVEFSD 213
Query: 185 FSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYLLE 239
F P N Q + + ++ R+ K A K + S+ G E
Sbjct: 214 FQCPFCSRANPALAQVQQEYGDKVRIVFRHFPLDFHKEAPKASEASLCAGDQGKFWE 270
>gi|301312046|ref|ZP_07217968.1| putative PPIC-type PPIASE domain protein [Bacteroides sp. 20_3]
gi|300830148|gb|EFK60796.1| putative PPIC-type PPIASE domain protein [Bacteroides sp. 20_3]
Length = 522
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 33/111 (29%), Gaps = 4/111 (3%)
Query: 170 MKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV 229
+ + +L + P + A +++ D +L K S
Sbjct: 221 SRKPNPGRVHVAHILIAFPKDSAIQDSSAFLAKAQAIYKQVQEGADFGELAKEYSGDAAS 280
Query: 230 S--IGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKR 276
+ G + ++ F+ + + T+ G I + DK+
Sbjct: 281 AKKGGVLPWFGIGEMVQPFEQAAFALSKPGDLSGVVETRFGYHIIKLIDKK 331
>gi|124266895|ref|YP_001020899.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family
protein [Methylibium petroleiphilum PM1]
gi|124259670|gb|ABM94664.1| putative rotamase/peptidyl-prolyl cis-trans isomerase family
protein [Methylibium petroleiphilum PM1]
Length = 264
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 14/155 (9%)
Query: 175 VREYLIRTVLFSIPDN-------KLQNQGFVQKR---IKDAEESRLRLPKDCNKLEKFAS 224
+R +LF + D V+ R + + + + ++
Sbjct: 97 GERVRVRHILFGVTDGVDITRLRARAEACLVELRSRSRSEIDAPVAEGDRFATAAARLSN 156
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKR--DLGG 280
G+ +L +D P+F L T+ G+ + + ++ + G
Sbjct: 157 CPSGEHGGELGWLEAADCAPEFARALFGQPELGMLPRLVHTRFGLHVVEVLQRQSGRVPG 216
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A++A + A +++++L A I
Sbjct: 217 FEAVQASVRAALQRQAFATALRQHLQRLAGEAHIE 251
>gi|242237960|ref|YP_002986141.1| nitrogen fixation protein NifM [Dickeya dadantii Ech703]
gi|242130017|gb|ACS84319.1| nitrogen fixation protein NifM [Dickeya dadantii Ech703]
Length = 279
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 14/161 (8%)
Query: 118 EDFSSFLDKQGIGDNHFKQYLAI------QSIWPDVVKNDFMLKYGNLEMEIPA-NKQKM 170
+ + L + G + + Q W V ++ +Q
Sbjct: 70 QQLAEPLAQAGFAPEERQAVIRHHALMELQLTW---VAAQ---AAAPTGQDVALWYRQHA 123
Query: 171 KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
E + L +++ + + +++ +
Sbjct: 124 DRFLRPEQRLTHHLLLTAEDERTAALVRAQIRGFHRTLCREPAQFERLARRYSHCPSALE 183
Query: 231 IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYI 270
G ++ L + Q+L + + P T+ G +
Sbjct: 184 GGLLGWVSRGLLFSELEQSLFMLREGQVSEPVETEIGWHLL 224
>gi|153950012|ref|YP_001402024.1| potassium efflux protein KefA [Yersinia pseudotuberculosis IP
31758]
gi|162419479|ref|YP_001607264.1| potassium efflux protein KefA [Yersinia pestis Angola]
gi|165927625|ref|ZP_02223457.1| potassium efflux system KefA [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165935894|ref|ZP_02224464.1| potassium efflux system KefA [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011037|ref|ZP_02231935.1| potassium efflux system KefA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212930|ref|ZP_02238965.1| potassium efflux system KefA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167421584|ref|ZP_02313337.1| potassium efflux system KefA [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|170025421|ref|YP_001721926.1| potassium efflux protein KefA [Yersinia pseudotuberculosis YPIII]
gi|229838731|ref|ZP_04458890.1| putative potassium efflux system [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229896116|ref|ZP_04511286.1| putative potassium efflux system [Yersinia pestis Pestoides A]
gi|229899299|ref|ZP_04514442.1| putative potassium efflux system [Yersinia pestis biovar Orientalis
str. India 195]
gi|229901357|ref|ZP_04516479.1| putative potassium efflux system [Yersinia pestis Nepal516]
gi|270489543|ref|ZP_06206617.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Yersinia pestis KIM D27]
gi|294504864|ref|YP_003568926.1| potassium efflux system KefA [Yersinia pestis Z176003]
gi|152961507|gb|ABS48968.1| potassium efflux system KefA [Yersinia pseudotuberculosis IP 31758]
gi|162352294|gb|ABX86242.1| potassium efflux system KefA [Yersinia pestis Angola]
gi|165916039|gb|EDR34646.1| potassium efflux system KefA [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920379|gb|EDR37656.1| potassium efflux system KefA [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990037|gb|EDR42338.1| potassium efflux system KefA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205717|gb|EDR50197.1| potassium efflux system KefA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960503|gb|EDR56524.1| potassium efflux system KefA [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|169751955|gb|ACA69473.1| MscS Mechanosensitive ion channel [Yersinia pseudotuberculosis
YPIII]
gi|229681286|gb|EEO77380.1| putative potassium efflux system [Yersinia pestis Nepal516]
gi|229687701|gb|EEO79774.1| putative potassium efflux system [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695097|gb|EEO85144.1| putative potassium efflux system [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701039|gb|EEO89068.1| putative potassium efflux system [Yersinia pestis Pestoides A]
gi|262366849|gb|ACY63406.1| potassium efflux system KefA [Yersinia pestis D182038]
gi|270338047|gb|EFA48824.1| transporter, small conductance mechanosensitive ion channel (MscS)
family protein [Yersinia pestis KIM D27]
gi|294355323|gb|ADE65664.1| potassium efflux system KefA [Yersinia pestis Z176003]
gi|320016313|gb|ADV99884.1| putative potassium efflux system [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 1120
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 55/180 (30%), Gaps = 19/180 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ T ++++ + A +S I + T ++ ++ LL QKI EK+
Sbjct: 1 MFTLVIIVLLLFSSTFVFGISAFASGINVDVP----TRSEVQSQLDLLSKQKILSPAEKL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A Q+L IE++ A + L + G K
Sbjct: 57 AQQDLTQTLEYLDTIERTKQE-------------ANQLKQQLAQAPAKLRQATEGLEALK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
A + L + + ++++ Y + + ++Q+
Sbjct: 104 SSSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSA--YNSQLIALQTQPERVQSA 161
>gi|50914897|ref|YP_060869.1| Phage endopeptidase [Streptococcus pyogenes MGAS10394]
gi|50903971|gb|AAT87686.1| Phage endopeptidase [Streptococcus pyogenes MGAS10394]
Length = 683
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 34/192 (17%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS------NTVNYF---FVQHARNTGL 115
+Q K AVQ +I E+L + I G+TF + + R L
Sbjct: 376 VQNRESRSRKEAVQNMIDESL--ETITDLGMTFQEFLQGIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
++F ++++G+ N K+ + V + E+ + +KN+T+
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK-------EVDER-------TDKELEEFRATLKNLTL 479
Query: 176 REYLIRTV-----LFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDV 229
E I+ + + IP K K + +E +RL + ++ +
Sbjct: 480 PEEAIKKITEAIKVDDIPSLKQNFDDLKNKVSETSETARLNAEIIGTDGKTRYNKNLL-- 537
Query: 230 SIGKAQYLLESD 241
+G + + D
Sbjct: 538 -VGDPNRVKKID 548
>gi|218288964|ref|ZP_03493201.1| hypothetical protein AaLAA1DRAFT_0787 [Alicyclobacillus
acidocaldarius LAA1]
gi|218240789|gb|EED07967.1| hypothetical protein AaLAA1DRAFT_0787 [Alicyclobacillus
acidocaldarius LAA1]
Length = 227
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 18 TYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAV 77
T + + C V +S ++ ++T + GE IT D + + + L + E + A
Sbjct: 74 TLYAHALGCSVAPLSTSPSSVFPFVQTVVMGEPITAEDYQQPLLFI-LTPRSQERRQFAQ 132
Query: 78 QELI 81
++LI
Sbjct: 133 EKLI 136
>gi|156373135|ref|XP_001629389.1| predicted protein [Nematostella vectensis]
gi|156216388|gb|EDO37326.1| predicted protein [Nematostella vectensis]
Length = 150
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 12/140 (8%)
Query: 143 IWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
W + V N Y + + ++ + +L +++ + K
Sbjct: 7 GWVEKVSNSTGKTYYLNQHTKASQWERPTEPAGDQVRASHLLVKHSESRRPSSWKTDKIT 66
Query: 203 KDAEES-------RLRLPKDCNKLEKFASKIHDVS----IGKAQYLLESDLHPQFQN-LL 250
+ +E+ + ++ LE A D S G + + F+
Sbjct: 67 RSKDEALAILKGYQEQIKSGEATLEDLAKTESDCSSAKNGGDLGFFGRGQMQKPFETATF 126
Query: 251 KKSQNNTTNPYVTQKGVEYI 270
+ P T G+ I
Sbjct: 127 SLRVGEMSEPVFTDSGIHLI 146
>gi|322436235|ref|YP_004218447.1| hypothetical protein AciX9_2642 [Acidobacterium sp. MP5ACTX9]
gi|321163962|gb|ADW69667.1| hypothetical protein AciX9_2642 [Acidobacterium sp. MP5ACTX9]
Length = 257
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 22/143 (15%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE-- 71
++ PIV ++ +NG++I + D+++ Q +
Sbjct: 31 AAVSGSSAAQSQARSPIVPSGDGITVDQVVAVVNGDLILESDVAEERRFGAFQPFSNPEG 90
Query: 72 --LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK-QG 128
+ VQ LI +L Q+ + D ++ E +S L++ +G
Sbjct: 91 TYSREETVQRLIDRSLILQQAR---LQPDDA--------------VTKEQATSELNELRG 133
Query: 129 IGDNHFKQYLAIQSIWPDVVKND 151
+ + + W V+
Sbjct: 134 VIPACKQYRCETDAGWQKFVEAQ 156
>gi|120437303|ref|YP_862989.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Gramella
forsetii KT0803]
gi|117579453|emb|CAL67922.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase [Gramella
forsetii KT0803]
Length = 706
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 9/123 (7%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSR----IRTTINGEVITDGDISKRI 60
V + L L +F V ++ M+S+ T+NG I + ++ +
Sbjct: 3 VLNKIRQRSVFLIIIIALALFSFVLADVIRNGGMASQSSQNTIATVNGNEIGREEFAREV 62
Query: 61 ALLKLQKINGELEKIAVQELIVETLKK----QEIEKSGITFDSNTVNYFF-VQHARNTGL 115
+ N AV + + L++ +E+EK GI V Q A N
Sbjct: 63 EAFERNMGNNMSTTQAVNRIWEQKLRQVILEEEVEKLGIRAGEAQVTQLVRTQMANNPNF 122
Query: 116 SAE 118
+ E
Sbjct: 123 TNE 125
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 65/234 (27%), Gaps = 24/234 (10%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E+ K I+ F A+ + Q IQ + D
Sbjct: 483 EVTKFEISASEGD----FGDIAKQGNYEVRTVKDVKALEENIPGAGAQRRVIQWAFEDEA 538
Query: 149 K----NDFMLKYGNLEMEIPANKQKM-KNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
K F G + ++ + + K ++ + +L KL ++
Sbjct: 539 KVGDVRRFETNNGYVVAQLTSKRDKGLMSVEEASGEVTPILRKEKKAKLIKDRLKGSSLQ 598
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
+ ++ ++ + + + + + + ++P
Sbjct: 599 EIANNQGVSVQNADAVNLSSPTLAGA----------GEEPEVVGAVFSLEPGKVSSPIAG 648
Query: 264 QKGVEYIAICDKRDLGGEIALKAY--LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+KGV + K + + +Y + Q + + + L+ A I
Sbjct: 649 EKGVYVAELVSKFEAP---TMDSYKGFAQQESAARRAQATMRIFDALKKKAEIE 699
>gi|331005209|ref|ZP_08328603.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium
IMCC1989]
gi|330420991|gb|EGG95263.1| Peptidyl-prolyl cis-trans isomerase ppiD [gamma proteobacterium
IMCC1989]
Length = 635
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 22/208 (10%)
Query: 14 KLLTTYFVLIIFCI-VPIVSYKSWAMSSRIR---TTINGEVITDGDIS-----KRIALLK 64
K LT F++ + I + +V ++ S ++G +IT+ D+ +R L
Sbjct: 10 KGLTAVFLIGLLTIPLALVGVENLFYGSSTVGEAAEVDGTIITERDVQLAISRERQRLQS 69
Query: 65 LQKIN--------GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNT 113
N L + + L+ TL EK +TF ++ V
Sbjct: 70 QFGENLPADFFTDERLRESVMSSLVQRTLMINIAEKGDMTFSDTEIDKTIVDLPIFQLEG 129
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+ F + G F+ L + + + + EI + +
Sbjct: 130 NFDQQRFLQGVRNLGHTPASFRTLLKNDLLANQMQNA-IVASDFITDKEIDSVVSLSRQT 188
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKR 201
Y+ L +P + + R
Sbjct: 189 RDFSYVTLP-LGELPQEMTVSDEEISTR 215
>gi|83643427|ref|YP_431862.1| AraC family DNA-binding domain-containing protein [Hahella
chejuensis KCTC 2396]
gi|83631470|gb|ABC27437.1| AraC-type DNA-binding domain-containing protein [Hahella chejuensis
KCTC 2396]
Length = 333
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 36/108 (33%), Gaps = 9/108 (8%)
Query: 52 TDGDISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
++ +R L +++ L+K++++ + +K ++ + +
Sbjct: 200 LTFELPQRNPYLHQALTRQVEALLQKLSLRRTVSHKVKAIVAKR----LSRGDIEA--EK 253
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKY 156
A +S L ++G+ + + + K + L
Sbjct: 254 VAEKMNMSRHTLYRKLKQEGVSFQELVEQVRKDKALDYLQKGKYSLSE 301
>gi|73974726|ref|XP_539204.2| PREDICTED: similar to plectin 1 isoform 1 isoform 1 [Canis
familiaris]
Length = 4686
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1364 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1421
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1422 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1481
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1482 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1541
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1542 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1598
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1599 QLEATERQRGGAEGE---LQALRARA 1621
>gi|186894355|ref|YP_001871467.1| potassium efflux protein KefA [Yersinia pseudotuberculosis PB1/+]
gi|186697381|gb|ACC88010.1| MscS Mechanosensitive ion channel [Yersinia pseudotuberculosis
PB1/+]
Length = 1120
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 55/180 (30%), Gaps = 19/180 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
+ T ++++ + A +S I + T ++ ++ LL QKI EK+
Sbjct: 1 MFTLVIIVLLLFSSTFVFGISAFASGINVDVP----TRSEVQSQLDLLSKQKILSPAEKL 56
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
A Q+L IE++ A + L + G K
Sbjct: 57 AQQDLTQTLEYLDTIERTKQE-------------ANQLKQQLAQAPAKLRQATEGLEALK 103
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
A + L + + ++++ Y + + ++Q+
Sbjct: 104 SSSADTMTKESLANYSLRQLESRLNETLDNLQSAQEDLSA--YNSQLIALQTQPERVQSA 161
>gi|257899550|ref|ZP_05679203.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
Com15]
gi|257837462|gb|EEV62536.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
Com15]
Length = 340
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 14/136 (10%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ +K + V ++ S + I T+ G IT D L
Sbjct: 1 MQTLMKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL------ 53
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ VQ +I+ + K G V+ + + A++ G + F S L+ G
Sbjct: 54 -ESSNQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLETAG 106
Query: 129 IGDNHFKQYLAIQSIW 144
+ +K+Y+ +
Sbjct: 107 YTKDSYKEYIRNNLAF 122
>gi|73974720|ref|XP_857253.1| PREDICTED: similar to plectin 1 isoform 1 isoform 6 [Canis
familiaris]
Length = 4691
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1369 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1426
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1427 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1486
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1487 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1546
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1547 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1603
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1604 QLEATERQRGGAEGE---LQALRARA 1626
>gi|14590058|ref|NP_142122.1| replication factor C small subunit [Pyrococcus horikoshii OT3]
gi|42559333|sp|O57852|RFCS_PYRHO RecName: Full=Replication factor C small subunit; Short=RFC small
subunit; AltName: Full=Clamp loader small subunit;
Contains: RecName: Full=Pho RFC intein
gi|3256498|dbj|BAA29181.1| 855aa long hypothetical replication factor C subunit [Pyrococcus
horikoshii OT3]
Length = 855
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
E K +E GI D N V + A TG+ A++ +++ G FK Y+ I
Sbjct: 403 DELEKLKESLSRGILIDWNEVAKRIEEVAEETGIRADELLEYIE--GKRKLSFKDYIKI 459
>gi|322788443|gb|EFZ14112.1| hypothetical protein SINV_03411 [Solenopsis invicta]
Length = 129
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 8/121 (6%)
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES-RLRLPKDCNKLEKF 222
A K + E + +K+ K E +L+ + N++
Sbjct: 9 AAKTSKGNKASSEESGGGKTEKKGGSSVKVRHILCEKQSKILEALEKLKAGQKFNEVAAT 68
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLL-------KKSQNNTTNPYVTQKGVEYIAICDK 275
S+ S G ++ + FQ+ S T P T+ G I + K
Sbjct: 69 YSEDKARSGGDLGWMTRGSMVGPFQDAAFALPISSLASPVYTDPPVKTKFGYHIIMVEGK 128
Query: 276 R 276
+
Sbjct: 129 K 129
>gi|307250251|ref|ZP_07532205.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857692|gb|EFM89794.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 625
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 50/165 (30%), Gaps = 19/165 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAKNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSPVFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
S + + L G+ + + + ++ + + ++ E
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSEFNVPE 177
>gi|303251064|ref|ZP_07337250.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307252639|ref|ZP_07534532.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650074|gb|EFL80244.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859884|gb|EFM91904.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 625
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 50/165 (30%), Gaps = 19/165 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAKNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSPVFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
S + + L G+ + + + ++ + + ++ E
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSEFNVPE 177
>gi|302551954|ref|ZP_07304296.1| lipoprotein [Streptomyces viridochromogenes DSM 40736]
gi|302469572|gb|EFL32665.1| lipoprotein [Streptomyces viridochromogenes DSM 40736]
Length = 215
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 42/115 (36%), Gaps = 15/115 (13%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKI---------------NGELEKIAVQELIVETLKK 87
+ G+ IT + +R+ ++ + G L + + ++++ +
Sbjct: 34 AAVVGGQRITVSQLEERVGEVRAAQRAAVQNDAQYQQAIARTGTLTRDTLHTMVLDRVLH 93
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQS 142
+ E +G+T + G + +++L + GI ++ L +Q
Sbjct: 94 RAAENAGVTVTRREMQEMRSGLEEQAGGAKALETTWLQQYGIPPQRLEENLRLQL 148
>gi|198425666|ref|XP_002128194.1| PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase
NIMA-interacting 4 (Rotamase Pin4) (PPIase Pin4)
(Parvulin 14) (hPar14) (Par14) (Peptidyl-prolyl
cis/trans isomerase EPVH) [Ciona intestinalis]
Length = 128
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 209 RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL-------KKSQNNTTNPY 261
+++ N++ + S+ S G +++ + FQ S T P
Sbjct: 54 KIKAGMKFNEVAQQYSEDKARSGGDLGWMIRGSMVGPFQEAAFALPVSSLASPKYTDPPV 113
Query: 262 VTQKGVEYIAICDKR 276
T+ G I + K+
Sbjct: 114 KTKFGYHIIMVEGKK 128
>gi|190150329|ref|YP_001968854.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307263670|ref|ZP_07545279.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915460|gb|ACE61712.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870983|gb|EFN02718.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 625
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 50/165 (30%), Gaps = 19/165 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAARNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSPVFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE 160
S + + L G+ + + + ++ + + ++ E
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEGVIGSEFNVPE 177
>gi|222056243|ref|YP_002538605.1| hypothetical protein Geob_3161 [Geobacter sp. FRC-32]
gi|221565532|gb|ACM21504.1| conserved hypothetical protein [Geobacter sp. FRC-32]
Length = 580
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 87/296 (29%), Gaps = 53/296 (17%)
Query: 27 IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE-----KIAVQELI 81
I + S +S T+ +V+T + ++ +A L + E I + LI
Sbjct: 48 ITLKIPLLSPKFASVPVATVGDDVVTMEEFNQSLAALHQRAGEDESAGKKDYNIVLNRLI 107
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
L QE E G+ D V R
Sbjct: 108 NSKLIVQEAENMGL-ADLPEVKEKLEDFPR------------------------------ 136
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKR 201
+ +K + E + + V+E +++V F ++ K
Sbjct: 137 MAIKEELKEQQIKDLKPAEADTE----RFYKEAVKELKVKSVRF--------DKEDDAKE 184
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNP 260
+ A ++ + N L + + K V G+ E L PQ +++ + +
Sbjct: 185 LARAVQAGGNFDELANSLIE-SGKATGVKEGEFVKAKE--LLPQVAHIVSSLRVGGISPV 241
Query: 261 YVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP-TKIEKHEAEYVKKLRSNAIIH 315
+ + D R ++ + Q +++ ++ A I
Sbjct: 242 VQVGPAYTILKLEDIRYPADDMEAREAAREQALALKQLQVLTEYNGMLVKKYAKID 297
>gi|322514009|ref|ZP_08067083.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC
25976]
gi|322120159|gb|EFX92120.1| peptidyl-prolyl cis-trans isomerase [Actinobacillus ureae ATCC
25976]
Length = 625
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 45/361 (12%), Positives = 97/361 (26%), Gaps = 105/361 (29%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI---------------TDGDISKR 59
+ F L+ V A +NG I + + +R
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLAGVDTSAAKVNGTAIEQQAFNAAKSRQQNILNTQMGER 72
Query: 60 I-ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTV---------------- 102
LL + + + + LI + L +Q + + + +
Sbjct: 73 FWDLLDTPEYAAQFNQSILNGLIDDELLRQYAQNLKLGISAEQIKSEIVHSPTFQQDGKF 132
Query: 103 -NYFFVQHARNTGLSAEDFSSFLD--------KQGIGDNHF---------------KQYL 138
N + Q RN GLSA+ +++ ++ ++GI +HF K+ +
Sbjct: 133 NNQLYQQALRNNGLSADGYAAIVNEAMLFSQIQEGIVGSHFSVPAEQELLAKLLLQKRQV 192
Query: 139 A-----------IQSIWPDVVKNDFML-------------------------KYGNLEME 162
Q+ + ++ + + +
Sbjct: 193 RLANYSVAAEAQNQTASGEELQAYYDAHKNAFVEPEKLAIEYVTLTPENVAKNVQVTDEQ 252
Query: 163 IPA--NKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLE 220
I K K +T E I + + N+ + Q+ A+ S L K +K
Sbjct: 253 IATYYEKNKADYVTQGETHIAHIQVA---NEADAKALEQQLAGGADFSALAKAKSTDK-- 307
Query: 221 KFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLG 279
+ G + F++ Q + I + +++
Sbjct: 308 -----LSAAQGGDLGWAKVGTFPKAFEDAANGLQVGAVSQAVNVDGAYHIIKVLARKNEQ 362
Query: 280 G 280
Sbjct: 363 A 363
>gi|186474397|ref|YP_001863368.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
gi|184198356|gb|ACC76318.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
Length = 284
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 65/242 (26%), Gaps = 23/242 (9%)
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL-AIQSIWPDVVKNDF 152
G++ ++ A + L Q I F+Q V+
Sbjct: 45 GVSIPQAQLDAAVQ--ATRQPDTP-QLRQALKAQLITRELFRQNAEKAGYGNKPEVQQVI 101
Query: 153 MLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNK----LQNQGFVQKRIKDAEE 207
N E ++ +T + R K +
Sbjct: 102 NATKVNAESQLYLKDNIHPDAVTDAQVKSRYDEIVASLGKDDYRPRIIAVADAMTAATVL 161
Query: 208 SRLRLPKDCNKLEKFASKIHD-VSIGKAQYLL---------ESDLH-PQFQNLLKKSQNN 256
L+ K + L + S D + G+ ++ S L P Q L +
Sbjct: 162 GGLKAGKSFDVLARQYSITPDKANGGELPWVSFKAPAAEGKTSGLPLPVAQALTQLPVGG 221
Query: 257 TTN-PYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
T P + + + KR +K + Q +EK A++ L NA
Sbjct: 222 VTPEPVIVGNARVIVKLDAKRPTQVPKFDQVKDTIRQQLQALALEKASAQFTAGLLKNAT 281
Query: 314 IH 315
I
Sbjct: 282 IQ 283
>gi|110597632|ref|ZP_01385917.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
ferrooxidans DSM 13031]
gi|110340752|gb|EAT59229.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Chlorobium
ferrooxidans DSM 13031]
Length = 702
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Query: 180 IRTVLFSI-PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+L P ++ + Q + + +++ + +P + + A ++ G +
Sbjct: 349 ASHILLRFNPASRAEVQKVRELSLLISQQLQAGVPFESLARKYSADPGSALNGGDIGWFS 408
Query: 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICD 274
+ P+F + P TQ G+ I +
Sbjct: 409 RERMVPEFAAAVFNARPGAVIGPVQTQFGLHIIKVTG 445
>gi|332638849|ref|ZP_08417712.1| peptidylprolyl isomerase [Weissella cibaria KACC 11862]
Length = 336
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 85/281 (30%), Gaps = 47/281 (16%)
Query: 33 YKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEK 92
W + + T + I+ D K K E ++ +I + L +K
Sbjct: 18 LAVWGVGPKSIATTDSGSISQAD------YYKKLKSTTEGQQQLANMIIQKVLD----KK 67
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDF 152
G S + + G FS+ L G+ ++ FK+ L +Q++ V+ +
Sbjct: 68 YGDKVSSKAITKQYDDVKAQYG---SQFSTALANNGMTEDSFKESLELQALEKAAVEANS 124
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
L+ + + +L S D +A++ +L
Sbjct: 125 KFTTKQLKEQY--------KNYTPNVNVSVILVSSED--------------EAKDMISKL 162
Query: 213 PKDCNKLEKFASKIH-DVSIGKAQYLLES------DLHPQFQN-LLKKSQNNTT-NPYVT 263
+K A K D S +++ L F+ K + T P +
Sbjct: 163 DDG-DKFATLAKKYSTDSSTKDKGGKMDAFDSTNTTLEDDFKTAAFKLKKGEYTKTPVKS 221
Query: 264 Q--KGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
G I + + D LK+ + ++
Sbjct: 222 DTYSGYFVIKMDSRDDKKSFTTLKSKMKEILVTNEMSDSSK 262
>gi|257888119|ref|ZP_05667772.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,141,733]
gi|257896990|ref|ZP_05676643.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
Com12]
gi|257824173|gb|EEV51105.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
1,141,733]
gi|257833555|gb|EEV59976.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Enterococcus faecium
Com12]
Length = 340
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 14/136 (10%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ +K + V ++ S + I T+ G IT D L
Sbjct: 1 MQTLMKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL------ 53
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ VQ +I+ + K G V+ + + A++ G + F S L+ G
Sbjct: 54 -ESSNQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLETAG 106
Query: 129 IGDNHFKQYLAIQSIW 144
+ +K+Y+ +
Sbjct: 107 YTKDSYKEYIRNNLAF 122
>gi|53803327|ref|YP_114963.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Methylococcus capsulatus str. Bath]
gi|53757088|gb|AAU91379.1| PpiC-type peptidylprolyl isomerase domain protein [Methylococcus
capsulatus str. Bath]
Length = 312
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 4/140 (2%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI--GKAQYL 237
I + F +PDN Q ++ +A RL + K+ ++ G +L
Sbjct: 157 ISQIQFRVPDNATAEQKAAARQRAEAALRRLEAGEPFPKVAGELTENPSAKPPQGDIGFL 216
Query: 238 LESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD--LGGEIALKAYLSAQNTPT 295
+ + T + G E + + D R + + ++ + +
Sbjct: 217 PREGDPWLTEAVRNLKVGEHTKVIESPAGYEILMLTDVRKALITPYVNVRDKVIQRMRGA 276
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
+ + Y++ L +A I
Sbjct: 277 EQARLRDAYIRDLAKHAKIE 296
>gi|326566698|gb|EGE16837.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 103P14B1]
Length = 617
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 80/296 (27%), Gaps = 76/296 (25%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 81 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 140
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 141 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 200
Query: 156 YGNLEMEIPA---------NKQKMKNITVREYLIRTVLFSIP--------------DNKL 192
+ +I A K +++ E + P +N +
Sbjct: 201 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANYLRENGI 260
Query: 193 QNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ + + + +++ R K E A D G ++ S F
Sbjct: 261 TDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSVF 320
Query: 247 --------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
Q L S + P T G + + + A + Q
Sbjct: 321 GEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 373
>gi|291520780|emb|CBK79073.1| trigger factor [Coprococcus catus GD/7]
Length = 448
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 6/100 (6%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L+++ + +K L++E + GIT V F A GL+ +
Sbjct: 352 LEQMKPQAQKNIENRLVLEAI----AAAEGITASEEEVEKEFANIAERYGLTVDKVKEIF 407
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ + K +A Q + + + +E +
Sbjct: 408 ADE--ETENIKSDIAAQKALDMITEAAVEVPVTEVEATVE 445
>gi|254286721|ref|ZP_04961675.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae AM-19226]
gi|150423148|gb|EDN15095.1| peptidyl-prolyl cis-trans isomerse D [Vibrio cholerae AM-19226]
Length = 619
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIEQYY-KTNTERFTRPEQVKVSYVELSADGLKAKVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + G ++ + P F+ + + + G I + D
Sbjct: 305 EKSQDLGSA--AEGGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDDI 362
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK--KLRSNA 312
+ + + + + + ++ Y K +L A
Sbjct: 363 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|19746226|ref|NP_607362.1| hypothetical protein spyM18_1255 [Streptococcus pyogenes MGAS8232]
gi|19748411|gb|AAL97861.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
Length = 683
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 32/191 (16%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS--NTVNY-------FFVQHARNTGL 115
+Q K AVQ +I E+L + I G+TF + + R L
Sbjct: 376 VQNREAMSRKEAVQNMIDESL--ETITGLGMTFQEFLQDIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
++F ++++G+ N K+ + V ++ E+ + +KN+ +
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK-------EVDER-------IDKELEEFRATLKNLAL 479
Query: 176 REYLIRTV-----LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
E I+ + + IP K K + +E SRL N + +K ++
Sbjct: 480 PEEAIKKITEAIKVDDIPSIKQSFDDLKNKVSETSETSRLNAEILGNNGKTRYNK--NLL 537
Query: 231 IGKAQYLLESD 241
+G + + D
Sbjct: 538 VGDPNRVKKID 548
>gi|325001686|ref|ZP_08122798.1| hypothetical protein PseP1_23131 [Pseudonocardia sp. P1]
Length = 288
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 51/190 (26%), Gaps = 22/190 (11%)
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
Q A ++ L+ L QG + + Q + D++ + E
Sbjct: 43 AQAAISSVLTRPGLVEGLTSQGGSQADIGRAIVSQLVIRDLLD-RLPAEQTGSVTEQQVQ 101
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGF-------------------VQKRIKDAEE 207
+Q + + + ++ P ++ V + ++AE+
Sbjct: 102 EQIDRAGGEQAVVAGSLSVGGPQASARDDLQLAGLARSELDRLSVTADIAVAQTREEAEQ 161
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-PYVTQKG 266
+ + + + + L+ P T +G
Sbjct: 162 LAREIAAGGARADSALAGA-GTAQRDLAIRPAETPQAALTPLIGLPAGQVAAFPLGTGQG 220
Query: 267 VEYIAICDKR 276
+ + D+R
Sbjct: 221 WVVVRVTDRR 230
>gi|153007316|ref|YP_001381641.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
gi|152030889|gb|ABS28657.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter sp.
Fw109-5]
Length = 339
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 39/308 (12%), Positives = 96/308 (31%), Gaps = 45/308 (14%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQKINGELEKIAVQ 78
+ V K S + NG IT + R+ ++ + E +K +
Sbjct: 10 LCALAVACGPKKDEKKSGPVVAQGNGVTITADEFKARLDEQSPFIRARYTTLERKKEFLD 69
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L+ + +E EK G+ D V K+ +
Sbjct: 70 NLVRFEVLAREAEKRGL-ADDPDVQM----------------------------TLKKIM 100
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFV 198
+ + + + E++ + K + + V+++ P + +
Sbjct: 101 VQKLVQKNFQDLEGAKNLPEPELQKYYDDHKSDYFRPKRVRLAAVIWNAPAGSPERAKKL 160
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHD-----VSIGKAQYLLESDLHPQFQNLLKKS 253
+ + + K+ + ++ + + G Q+ +L F L +
Sbjct: 161 AQAKAALAKIKAEEKKNALAFNQAVAQYSEDAATKSAGGDLQFKSHEELSQAFSKELADA 220
Query: 254 Q-----NNTTNPYVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVK 306
T+ T KG+ + + +++ +K ++ + + K E++K
Sbjct: 221 AFALQAGQTSGVIETPKGLYLLKLTAQQEELNRSFDQVKTQIANKLYRERKTKEFDEWLK 280
Query: 307 KLRSNAII 314
+L+ A I
Sbjct: 281 RLKDEAKI 288
>gi|162451238|ref|YP_001613605.1| foldase protein prsA precursor [Sorangium cellulosum 'So ce 56']
gi|161161820|emb|CAN93125.1| Foldase protein prsA precursor (EC 5.2.1.8) [Sorangium cellulosum
'So ce 56']
Length = 605
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 40/369 (10%), Positives = 95/369 (25%), Gaps = 98/369 (26%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL------EKIAVQELIVETL 85
+ + + + G I+ D + LL ++ + ++ + L L
Sbjct: 28 TGPVQSAGNTCAVEVRGSCISSIDFNASKNLLAMRSPDENRLRAMGYRRLTAEGLYERWL 87
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSA---------------EDFSSFLDKQG-- 128
++ ++ GIT + + A +S ED +LD +
Sbjct: 88 LNEDAKRLGITVSDDELTSEL--VAGRVHVSLPADKIRQVGYALSLREDLIRYLDVRNRQ 145
Query: 129 ------------------IGDNHFKQYLAIQSI---WPDVVKNDFMLK------------ 155
+ F++Y + I ++++ +
Sbjct: 146 TKKFDNKQYEKQIRNITKMSPTDFREYQRKELIAARMRELIRARVRVGENEAFEQFSREK 205
Query: 156 ------------------------------YGNLEMEIPANKQKMKNITVRE-----YLI 180
N + E+ + K E L
Sbjct: 206 STRTLAYVRFDRRFYSDLIVDTSEKAIQAWADNNKEELDKAWEGRKAQYQPECRVARVLA 265
Query: 181 RTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK-IHDVSIGKAQYLLE 239
V + + K + RL+ + + + AS G+ + +
Sbjct: 266 VEVRPEEAEQGPEAGKAAAKARIEGAVQRLKKGESFADVARSASDDPSAARGGELGCVAK 325
Query: 240 SDLH-PQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIE 298
L P L + + ++ T+ G I + + + + +
Sbjct: 326 GRLSKPVEDKLFEMKAGDVSDLIETEDGFHVIKL---EQIAKDAEAEKIGRQETARDLYI 382
Query: 299 KHEAEYVKK 307
HE+E +
Sbjct: 383 AHESERLAA 391
>gi|153854554|ref|ZP_01995824.1| hypothetical protein DORLON_01819 [Dorea longicatena DSM 13814]
gi|149752863|gb|EDM62794.1| hypothetical protein DORLON_01819 [Dorea longicatena DSM 13814]
Length = 428
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 29 PIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLK 86
P++ ++ M I + IT + + L +++ A++ I L
Sbjct: 306 PMIDTQTTQMVEDFAQRIQSQGIT---LEQYFQFTGLTAEKMMEDMKPQAIKR-IETRLV 361
Query: 87 KQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
+ I K+ I V+ + A + + E F+ + K+ LA+Q
Sbjct: 362 LEAIAKAENIEITDEKVDEELAKMAESYNMEVEKLKEFMGEN--EKKQMKEDLAVQEAVT 419
Query: 146 DVVKN 150
+V+N
Sbjct: 420 FLVEN 424
>gi|42518575|ref|NP_964505.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
gi|81703880|sp|Q74KU8|MUTS2_LACJO RecName: Full=MutS2 protein
gi|41582860|gb|AAS08471.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
Length = 788
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 18/195 (9%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAV------QELIVETLKKQEIEKSGITFDSNTVNY 104
+ D+ K +L+ I G+ A+ E++V+ +S + + + +N
Sbjct: 467 MEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEVVVDK------ARSLMNDEDSDINK 520
Query: 105 FFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
+ T +AE L + K+ L W + + K E+
Sbjct: 521 MIERLTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEML 579
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
A K++ + + + + +++ ++ + + R NK+ +
Sbjct: 580 AKKRQKADKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLAQNKVLQREK 635
Query: 225 KIHDVSIGKAQYLLE 239
+ HDVS+G +L
Sbjct: 636 RRHDVSVGDTVKVLS 650
>gi|332291258|ref|YP_004429867.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter
diaphorus 4H-3-7-5]
gi|332169344|gb|AEE18599.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Krokinobacter
diaphorus 4H-3-7-5]
Length = 713
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 25/242 (10%), Positives = 69/242 (28%), Gaps = 33/242 (13%)
Query: 95 ITFDSNTVNYFFV-----QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI-------QS 142
I T++ + + A G DF + G Q + +
Sbjct: 477 IVPSDKTISSIYNTTQKFELAAQDG----DFQEVATENGYTVRPV-QRIRAMDENLPGEG 531
Query: 143 IWPDVVKNDFMLKYGNLEME---------IPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
+V+ F + +++ + ++ T R + T + I N ++
Sbjct: 532 AQRSIVQWAFEEEVSVGDIKRFPVNNGYIVAQVTRRTPKGTERVEDVSTQVTPILRN-MK 590
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
++ ++ A + + + + +S+ +
Sbjct: 591 KAAIIKDKLSGATLAEMAQSQS-----QTVKTASAISMNAPTIAGAGNEPKVVGAAFGLK 645
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAI 313
+ ++P +GV + + + + A + Q ++ + L+ A
Sbjct: 646 EGEISDPIEGSRGVYVVQVTKITEAPA-LENYASFATQEAQKARVAVSSKVLNALKEAAE 704
Query: 314 IH 315
I
Sbjct: 705 IE 706
>gi|294497317|ref|YP_003561017.1| putative lipoprotein [Bacillus megaterium QM B1551]
gi|294347254|gb|ADE67583.1| putative lipoprotein [Bacillus megaterium QM B1551]
Length = 264
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
++ ++++ + L+ +TL QE E G VN + + + + F + L
Sbjct: 105 KEAAKQVKQQTIDNLVGQTLLLQEAENKGYKATDEEVNKKLKETKKQFK-TDKQFKAALK 163
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ + K LA + V D
Sbjct: 164 DAGLTQSQLKSELADSIKYQQYVDKDIQ 191
>gi|317130860|ref|YP_004097142.1| hypothetical protein Bcell_4184 [Bacillus cellulosilyticus DSM
2522]
gi|315475808|gb|ADU32411.1| hypothetical protein Bcell_4184 [Bacillus cellulosilyticus DSM
2522]
Length = 266
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 24/187 (12%)
Query: 42 IRTTINGEVITDGD--------ISKRIALLKLQKINGE------LEKIAVQELIVETLKK 87
+ T+NGE I D + ++ ++ + G LE+ +LI + +
Sbjct: 67 VIATVNGEDIGKEDFVALLEQHLMQQASMGLTLDMEGSDEILAMLEEDVANQLINQRVVY 126
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FSSFLDKQGIGDNHFKQYLAIQSIWPD 146
Q+ ++ G ++ + +E+ L+ G+ + F+Q +A
Sbjct: 127 QKAQEEGFDATDEEIDEELELIRMQYQIESEEMLIEILEADGVSVDDFRQDIAQYISGEK 186
Query: 147 VVKNDFMLKYGNLEM------EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
+ + + E E A Q+ + E I + + +
Sbjct: 187 FLDSRIDTTTVSDEAVQEEYDEYVARVQEAIEQSGEEMDIPEIEDV---RADIESYLMNQ 243
Query: 201 RIKDAEE 207
+ ++ E
Sbjct: 244 QRQELES 250
>gi|330718762|ref|ZP_08313362.1| peptidylprolyl isomerase [Leuconostoc fallax KCTC 3537]
Length = 301
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 39/137 (28%), Gaps = 17/137 (12%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
SS+ T IT+ D +I K E K+ + +++ + K G
Sbjct: 24 SSKTLATSTAGKITEKDFYNQIK--KSSAGKQEFAKMVINKVLED--------KYGDNVS 73
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
V+ F G S F L + + K L + K Y
Sbjct: 74 KADVDSAFEAQKSQYGSS---FKEVLASNNMTEKQLKDSLRNNL----LTKAAIKANYNV 126
Query: 159 LEMEIPANKQKMKNITV 175
E +I K
Sbjct: 127 TEKQIKKAYDDYKPAVT 143
>gi|329925505|ref|ZP_08280379.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5]
gi|328939788|gb|EGG36128.1| PPIC-type PPIASE domain protein [Paenibacillus sp. HGF5]
Length = 311
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 91/292 (31%), Gaps = 32/292 (10%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
+ W S+ +I IT+ + + +L+K G + + ++ E +
Sbjct: 36 ASPPWKAGSQPVASIQDRAITEDE-----WVDELKKRYG---REMLMTMLNRHAVALEAK 87
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
GI + V +R+ G S D+ GI ++ K + + + +D
Sbjct: 88 AKGIDVTAAEVETEIEVMSRSYGSKERFLSEMEDQLGITESELKTETTYRLLLEKIATSD 147
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
++ ++ + + + ++ + + + + RL
Sbjct: 148 VHIEEQQIDSYLEQYPDQFRP--KKQLNLSMI------------EVASEDEAERVMDRLE 193
Query: 212 LPKDCNKLEKFAS--KIHDVSIGKAQYLLESD--LHPQ-FQNLLKKSQNNTTNPYVTQKG 266
+D L S + G+ + E D L P+ + L + P
Sbjct: 194 NGEDFADLAAQVSLDEYTREDGGQIGLVEEDDPFLPPELLEAALSLEPGDIAGPVSLTDT 253
Query: 267 VEYIAICDK--RDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN--AII 314
+ + D E +++ + Q + ++LR A I
Sbjct: 254 YAIVYVKDIIEPQAPSEESIRKAVRKQLALEQSVSLSE-LERQLREKYEARI 304
>gi|293571342|ref|ZP_06682373.1| foldase protein PrsA [Enterococcus faecium E980]
gi|291608558|gb|EFF37849.1| foldase protein PrsA [Enterococcus faecium E980]
Length = 336
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + V ++ S + I T+ G IT D L
Sbjct: 1 MKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------ESS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLETAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 SYKEYIRNNLAF 118
>gi|154494369|ref|ZP_02033689.1| hypothetical protein PARMER_03724 [Parabacteroides merdae ATCC
43184]
gi|154085813|gb|EDN84858.1| hypothetical protein PARMER_03724 [Parabacteroides merdae ATCC
43184]
Length = 532
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 4/121 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYL 237
+ VL + ++ + + + D L K S + G+
Sbjct: 237 VAHVLIPFEKDSVKFGEAETLARAEEVYRKAKDGADFAMLAKEYSSDAGSAKRGGELPAF 296
Query: 238 LESDLHPQF--QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
++ F + + P T+ G I + +K+ + K S Q
Sbjct: 297 GVGEMVEPFEVAAFALNTPGELSRPVKTRFGYHIIKLIEKKGIPSFDDKKKAWSRQMAQG 356
Query: 296 K 296
+
Sbjct: 357 E 357
>gi|261406730|ref|YP_003242971.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
gi|261283193|gb|ACX65164.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus sp.
Y412MC10]
Length = 363
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 36/335 (10%), Positives = 106/335 (31%), Gaps = 47/335 (14%)
Query: 15 LLTTYFVLIIFCIVPIV--SYKSWAMSSRIRTTINGEVITDGDISK-----RIALLKLQK 67
+ +F+LI+ I+ I ++ T++G I + + R ++K
Sbjct: 15 FIAGFFILIVVTILLIAKPAFTQTHHEDAYIATVDGVEIHVSEFQRAIDANRAGIIKYFH 74
Query: 68 INGEL---------------------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
+ +K A+++ I + +++ ++ + + +
Sbjct: 75 EKYDAAPSAAFWTTPYGGNEIPLELIKKKALEDSINQKIRQILAKEQEVLP-----DISY 129
Query: 107 VQHARNTGLSAEDFSSFLDKQGI-------GDNHFKQYLAIQSIW---PDVVKNDFMLKY 156
+N L + + + + + +Y+ + ++++D+
Sbjct: 130 AGFIQNFNLENQRRQQAIKNHQVIFGPAQYTEEAYYEYMMANTALSVKNHLMEHDWKPSE 189
Query: 157 GNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK-- 214
L ANK+++ + + + L + N+ + + + E++R ++
Sbjct: 190 QQLITFYEANKRRLYHAPATVKVRQLSLSFLDANRNVDTLLKTQVKRKIEKAREKISSGI 249
Query: 215 DCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI 272
+ K + V+ + + P Q + +
Sbjct: 250 SFEQAVKDIKQDDRVTEEVYNLDSYRHNVRSPVAQASADLLPGEVSEIIEENGRFYLMQC 309
Query: 273 CDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKK 307
+K LG + + Q I+ +YV++
Sbjct: 310 MEKDQLGSKYLAFDGIREQVLKDYIDNQYEQYVRE 344
>gi|209559961|ref|YP_002286433.1| hypothetical protein Spy49_1466c [Streptococcus pyogenes NZ131]
gi|209541162|gb|ACI61738.1| hypothetical protein Spy49_1466c [Streptococcus pyogenes NZ131]
Length = 683
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 34/192 (17%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS------NTVNYF---FVQHARNTGL 115
+Q K AVQ +I E+L + I G+TF + + R L
Sbjct: 376 VQNRESRSRKEAVQNMIDESL--ETITDLGMTFQEFLQGIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
++F ++++G+ N K+ + V + E+ + +KN+T+
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK-------EVDER-------TDKELEEFRATLKNLTL 479
Query: 176 REYLIRTV-----LFSIPDNKLQNQGFVQKRIKDAEESRLRLP-KDCNKLEKFASKIHDV 229
E I+ + + IP K K + +E +RL + ++ +
Sbjct: 480 PEEAIKKITEAIKVDDIPSLKQNFDDLKNKVSETSETARLNAEIIGTDGKTRYNKNLL-- 537
Query: 230 SIGKAQYLLESD 241
+G + + D
Sbjct: 538 -VGDPNRVKKID 548
>gi|320106474|ref|YP_004182064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus
saanensis SP1PR4]
gi|319924995|gb|ADV82070.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Terriglobus
saanensis SP1PR4]
Length = 275
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
L ++A Q ++ L +Q +GIT V+ S+ + G+
Sbjct: 41 LRQMAEQRILSAVLLRQLAVGAGITASDEEVD-------TRRRAQWGTSSASVCGPGVYL 93
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ L I+ + +++ +E ++ + E + ++ +I +
Sbjct: 94 -AIRDNLLIEKYSQWLTRHEMRPSREEVERYYEQHRVEFHQPERIE--VAHIICNIDRPE 150
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLHPQFQNLL 250
+ + + + E + + +K A K D ++ + +F ++
Sbjct: 151 DRAVAQSKMQQAEMELNTGK------PFQKVAEKYSDCGGKVPLGWITRGVMVEEFDEVV 204
Query: 251 -KKSQNNTTNPYVTQKGVEYIAICDKRDLGGE--IALKAYLSAQNTPTKIEKHEAEYVKK 307
+N + + ++ G+ + + + G E +K ++ + + +K V +
Sbjct: 205 FTLKRNERSEIFSSRFGLHIATVLNIKPAGYEPLQEVKLSIAKRMLEERRQKTVRLAVDE 264
Query: 308 LRSNAIIH 315
A+I
Sbjct: 265 ATRRAVIE 272
>gi|295702690|ref|YP_003595765.1| putative lipoprotein [Bacillus megaterium DSM 319]
gi|294800349|gb|ADF37415.1| putative lipoprotein [Bacillus megaterium DSM 319]
Length = 264
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
++ ++++ + L+ +TL QE E G VN + + + + F + L
Sbjct: 105 KEAAKQVKQQTIDNLVGQTLLLQEAENKGYKATDEEVNKKLKETKKQFK-TDKQFKAALK 163
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFM 153
G+ + K LA + V D
Sbjct: 164 DAGLTQSQLKSELADSIKYQQYVDKDIQ 191
>gi|73974718|ref|XP_857213.1| PREDICTED: similar to plectin 1 isoform 1 isoform 5 [Canis
familiaris]
Length = 4549
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1227 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1284
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1285 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1344
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1345 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1404
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1405 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1461
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1462 QLEATERQRGGAEGE---LQALRARA 1484
>gi|326569386|gb|EGE19446.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis BC8]
Length = 614
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 31/297 (10%), Positives = 82/297 (27%), Gaps = 78/297 (26%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 78 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 137
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 138 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 197
Query: 156 YGNLEMEIPANKQKMKN------------------------ITVREYLIRTVLFSIPDNK 191
+ +I A + ++ T +E + + + +N
Sbjct: 198 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANY-LRENG 256
Query: 192 LQNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + + +++ R K E A D G ++ S
Sbjct: 257 ITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSV 316
Query: 246 F--------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
F + L S + P T G + + + A + Q
Sbjct: 317 FGEYAAGVERALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 370
>gi|319900080|ref|YP_004159808.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
helcogenes P 36-108]
gi|319415111|gb|ADV42222.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Bacteroides
helcogenes P 36-108]
Length = 518
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 36/312 (11%), Positives = 100/312 (32%), Gaps = 72/312 (23%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE--- 79
+ + +S + + ING+ + + + + + + +
Sbjct: 7 GLAIVFLCLSLATAVAQDPVLMRINGKDVLRSEFE----YVYNKNNKSASARQVMPKNYV 62
Query: 80 --LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
I LK E E +G+ S F+
Sbjct: 63 GTFIDYKLKVAEAETAGMDTTSA---------------------------------FRDK 89
Query: 138 LAIQSIWPD---VVKNDFMLKYGNL---EMEIPANKQKMKNITVREYLIRTV----LFSI 187
L + W +V + + + ++ K++ + +YL + + L I
Sbjct: 90 LEARRRWSSISYLVDEETEERIAHRFYNRLKFARQAGKVRVSHIFKYLSQNISGHALHEI 149
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
++K+ K+A+ S+ ++ + +F+
Sbjct: 150 EAKMDSIYQMLRKQGKNAD-----FDACVVDFSDEKSEF---------WVSWLQMPAEFE 195
Query: 248 NLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIEKHEAEYV 305
+++ Q ++P+ T +G+ + + ++R+L E + + ++ ++++ V
Sbjct: 196 DIVFGMQVGEISHPFFTPQGIHIVKVLERRELPPFEEVKEGIMHSRTYRYEMDEEMDALV 255
Query: 306 KKLRSNAIIHYY 317
+KL+ Y+
Sbjct: 256 EKLKK----EYH 263
>gi|73974716|ref|XP_857167.1| PREDICTED: similar to plectin 1 isoform 1 isoform 4 [Canis
familiaris]
Length = 4587
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1265 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1322
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1323 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1382
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1383 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1442
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1443 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1499
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1500 QLEATERQRGGAEGE---LQALRARA 1522
>gi|73974724|ref|XP_857335.1| PREDICTED: similar to plectin 1 isoform 1 isoform 8 [Canis
familiaris]
Length = 4544
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1222 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1279
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1280 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1339
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1399
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1456
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1457 QLEATERQRGGAEGE---LQALRARA 1479
>gi|227552654|ref|ZP_03982703.1| peptidylprolyl isomerase [Enterococcus faecium TX1330]
gi|293378656|ref|ZP_06624815.1| putative foldase protein PrsA [Enterococcus faecium PC4.1]
gi|227178280|gb|EEI59252.1| peptidylprolyl isomerase [Enterococcus faecium TX1330]
gi|292642696|gb|EFF60847.1| putative foldase protein PrsA [Enterococcus faecium PC4.1]
Length = 336
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
+K + V ++ S + I T+ G IT D L
Sbjct: 1 MKKKSIILAATSALAVLTLAACSGDTNKDI-ATMKGGTITVSDFYDEAKL-------ESS 52
Query: 73 EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ VQ +I+ + K G V+ + + A++ G + F S L+ G +
Sbjct: 53 NQSLVQRMIIYKVFNN---KYGDKVTDKQVDAEYDKQAKSLG---DTFESQLETAGYTKD 106
Query: 133 HFKQYLAIQSIW 144
+K+Y+ +
Sbjct: 107 SYKEYIRNNLAF 118
>gi|224532164|ref|ZP_03672796.1| trigger factor [Borrelia valaisiana VS116]
gi|224511629|gb|EEF82035.1| trigger factor [Borrelia valaisiana VS116]
Length = 452
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 18/116 (15%)
Query: 79 ELIVET---LKKQE-----IEKSGITFD----SNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+LI E LK + EK I + F A+ +S E+F S
Sbjct: 286 DLIEEKKEALKLNKFFSTISEKLEIDIPRSMIEAEIEIAFKDIAKQNKMSLEEFKSIFYS 345
Query: 127 QG-IGDNHFKQYL----AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
G +G + K + + I +V D ++ +++ KQ + E
Sbjct: 346 SGYVGGKNLKDEILSNLKSKLIIQKMVDLD-PIEVTESDLKDEMTKQSENSGASYE 400
>gi|149183221|ref|ZP_01861666.1| YacD [Bacillus sp. SG-1]
gi|148849054|gb|EDL63259.1| YacD [Bacillus sp. SG-1]
Length = 123
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 17/111 (15%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITD----GDI 56
+ V SL FI L LI F + + T+ GE I+ ++
Sbjct: 7 LKRSVLISL-VFILLGANVVTLIYFTKAEAGPGLAELAGAETAATVGGETISRESWMFEM 65
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
KR K ++ELI + + Q EK I ++
Sbjct: 66 EKRYG------------KEVLRELINQKVMIQLAEKYDIKVTDEELDKEVA 104
>gi|324997548|ref|ZP_08118660.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudonocardia sp.
P1]
Length = 475
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 53/189 (28%), Gaps = 13/189 (6%)
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARN---TGLSA-EDFSSFLDKQGIGDNHFKQYLA 139
+ + + GI + ++ G A F L + G + +
Sbjct: 217 MVIDRAAAERGIVVAERAAQDYLGRYIEQYFGNGADARAAFVEALGQAGTSEPAVLGEIK 276
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
Q + + + ++ ++ L ++ + ++++ Q
Sbjct: 277 RQMAAAQLFQQVTADIPQVTDADVETAFGDRRDA-----LAMPERRAVSNIVVRDEAAAQ 331
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTT 258
+ + D + R P + A + G L + L F + N
Sbjct: 332 QILGDLQGGR---PFADVARARSADAATREAGGAIGTLAAAQLEKPFADAAFGAEPNVPF 388
Query: 259 NPYVTQKGV 267
P TQ G
Sbjct: 389 GPVKTQHGW 397
>gi|85858466|ref|YP_460668.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB]
gi|85721557|gb|ABC76500.1| peptidyl-prolyl cis-trans isomerase [Syntrophus aciditrophicus SB]
Length = 533
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 30/136 (22%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR----IALLKLQKING 70
L+ +II + ++ S ++G+ I ++ K + Q
Sbjct: 13 LMKFLLGMIIVVFIFYFGTRTGKEKSETVAIVDGKEIALAEVQKEYSNLAEFYRRQYGGS 72
Query: 71 ---------ELEKIAVQELIVETLKKQEIEKSGITFDSNTV-----------------NY 104
EL++ A+ LI + + Q+ + +T + V
Sbjct: 73 LTDEMLKGLELKQNALDSLIAQAIIMQKAGELNLTATDDEVRNFIMAYPAFQRDGTFNEK 132
Query: 105 FFVQHARNTGLSAEDF 120
+ Q R ++ E+F
Sbjct: 133 IYQQMLRLNRMTPEEF 148
>gi|73974712|ref|XP_848799.1| PREDICTED: similar to plectin 1 isoform 1 isoform 2 [Canis
familiaris]
Length = 4570
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1248 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1305
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1306 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1365
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1366 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1425
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1426 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1482
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1483 QLEATERQRGGAEGE---LQALRARA 1505
>gi|77411331|ref|ZP_00787679.1| rotamase family protein [Streptococcus agalactiae CJB111]
gi|77162591|gb|EAO73554.1| rotamase family protein [Streptococcus agalactiae CJB111]
Length = 139
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
Query: 48 GEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV 107
G+ IT D ++ K A Q ++ L + + G V+ +
Sbjct: 3 GDTITVSDFYDQVK----------TSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYN 52
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
+ A+ G S FSS L + G+ +KQ + +
Sbjct: 53 KTAKGYGNS---FSSALSQAGLTPEGYKQQIRTTML 85
>gi|71901123|ref|ZP_00683230.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
gi|71729128|gb|EAO31252.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
Ann-1]
Length = 655
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 51/173 (29%), Gaps = 12/173 (6%)
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + E + + + + +L ++ + + K K EE
Sbjct: 258 AAHLPRPTPSEAVLRKRYDAQQRGEAQNEQRKAAHILITVGADAASQKVAEAKAAKLVEE 317
Query: 208 SRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
+R + D L + S+ + G ++ + F++ L P T+
Sbjct: 318 AR-KPGADFAALARINSQDPGSKDAGGDLGWVQRGMMVKPFEDALFAMKVGEVVGPIKTE 376
Query: 265 KGVEYIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + + + L A + ++ + + L N
Sbjct: 377 FGNHVIKLEEIKAAKQLPFEAVRDQLAAEQTKEDIDKAFNDVTGKLMDLLVKN 429
>gi|297579436|ref|ZP_06941364.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae RC385]
gi|297537030|gb|EFH75863.1| peptidyl-prolyl cis-trans isomerase D [Vibrio cholerae RC385]
Length = 619
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 60/219 (27%), Gaps = 13/219 (5%)
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
D T+ A+ LS E+ + K + + + + +
Sbjct: 192 DIRTITLSLEDFAKKVTLSDEEIDQYY-KTNTERFTRPEQVKVSYVELSADGLKAQVSVD 250
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+ + + K T + + +L N + I D +
Sbjct: 251 DAAAQQYYQEHLDKYSTAEQRNVSHILIE------GNDEQKAQAILDELNAGADFATLAK 304
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK 275
+ + + G ++ + P F+ + + + G I + +
Sbjct: 305 EKSQDLGSAEE--GGSLGWIEPDTMDPAFEAAAFALTEKGQVSGLVKSDFGYHIIRLDEI 362
Query: 276 RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK--KLRSNA 312
+ + + + + + ++ Y K +L A
Sbjct: 363 KAPVVKPYSEVEQAIKQELIDQQALDSFYAKQSELEKMA 401
>gi|325914922|ref|ZP_08177254.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria
ATCC 35937]
gi|325538815|gb|EGD10479.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas vesicatoria
ATCC 35937]
Length = 685
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 17/99 (17%)
Query: 51 ITDGDISKRIALLKLQKINGELEK-------------IAVQELIVETLKKQEIEKSGITF 97
I+ D R ++Q+ + EK + +L+ E + + E +GI
Sbjct: 99 ISTQDFRARFEQARMQERQRQGEKFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVI 158
Query: 98 DSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGDNH 133
TV + + S + + + L + G
Sbjct: 159 GDATVRDYITNIQAFQVDGKFSPDQYRAALAQ-GTPPRT 196
Score = 36.2 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 5/123 (4%)
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESD 241
+ + Q + + + D L K S+ + G ++ +
Sbjct: 323 ILITAGSDAAAQKAAEAKAAKLAADAKQPGADFAALAKANSQDPGSKDAGGDLGWVEKGT 382
Query: 242 LHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ F++ L + P ++ G I + + + G+ + + Q +++
Sbjct: 383 MVKPFEDALFSMKAGDVVGPIKSEFGYHVIQLREVKGGQGKSFEQ--VRDQFAAEQLKAD 440
Query: 301 EAE 303
+
Sbjct: 441 ADK 443
>gi|78485939|ref|YP_391864.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
gi|78364225|gb|ABB42190.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
Length = 102
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 202 IKDAEESRLRLP-KDCNKLEKFASK----IHDVSIGKAQYLLESDLHPQF-QNLLKKSQN 255
+AE L+ D ++ A + G + P+F Q + +
Sbjct: 22 KTEAECLALKQQINDFETFDQLAREHSLCPSGRVGGDLGIFGPGKMVPEFDQVVFNDAIG 81
Query: 256 NTTNPYVTQKGVEYIAICDKR 276
P TQ G I I D++
Sbjct: 82 EVHGPVPTQFGYHLIWITDRK 102
>gi|73974722|ref|XP_857294.1| PREDICTED: similar to plectin 1 isoform 1 isoform 7 [Canis
familiaris]
Length = 4544
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 91/266 (34%), Gaps = 16/266 (6%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS-NTVNYFFVQHARNT 113
D +R ++Q + + ++L E +EIE+ G D + ++ ++
Sbjct: 1222 DAKQRQE--RIQAVPLANSQAVREQLQQEKELLEEIERYGEKVDECQQLAKQYINAIKDY 1279
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV--KNDFMLKYGNLEMEIPANKQKMK 171
L + + L+ K +S+ + V + + I ++ ++
Sbjct: 1280 ELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFIRETLR 1339
Query: 172 NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI 231
+ E L + + + ++K+ + AE + + E+ ++ +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1399
Query: 232 GKAQYLLESD-----LHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA 286
+ + +++ + + Q+L + S+ + VE R ++
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEI---QAKARQVEAAERSRVRIEEEIRVVRL 1456
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNA 312
L A + E ++ LR+ A
Sbjct: 1457 QLEATERQRGGAEGE---LQALRARA 1479
>gi|46579881|ref|YP_010689.1| peptidyl-prolyl cis-trans isomerase C [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602653|ref|YP_967053.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris DP4]
gi|46449297|gb|AAS95948.1| peptidyl-prolyl cis-trans isomerase C [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562882|gb|ABM28626.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris DP4]
gi|311234118|gb|ADP86972.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
vulgaris RCH1]
Length = 94
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 209 RLRLPKDCNKLEKFASK-IHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKG 266
R+ +D ++ + +S+ G + P+F + + P TQ G
Sbjct: 23 RIEGGEDFAEVARASSRCPSGKRGGDLGEFPRGAMVPEFDEAVFTGEVGKVLGPIRTQFG 82
Query: 267 VEYIAICDK 275
+ + +
Sbjct: 83 YHLVEVTSR 91
>gi|331086221|ref|ZP_08335303.1| trigger factor [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406380|gb|EGG85894.1| trigger factor [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 428
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 71 ELEKIAVQELIVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
EL AV+ I L + I K+ I ++ + A + E F+ +
Sbjct: 347 ELRPQAVKR-IETRLVLEAIAKAENIEISDEKLDEELAKMAEAYKMEVEKLKEFMGEAE- 404
Query: 130 GDNHFKQYLAIQSIWPDVV 148
K+ + + V
Sbjct: 405 -----KKQMKADMAVQEAV 418
>gi|301165601|emb|CBW25172.1| trigger factor [Bacteriovorax marinus SJ]
Length = 426
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
LI++ L +K + + + + A +G+ A+ S+
Sbjct: 351 QVRSGLILDNL----AKKFNVEASDSDFDAKIEEMAAGSGMQADQIKSYYASD 399
>gi|295132519|ref|YP_003583195.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Zunongwangia
profunda SM-A87]
gi|294980534|gb|ADF50999.1| PpiC-type secreted peptidyl-prolyl cis-trans isomerase
[Zunongwangia profunda SM-A87]
Length = 702
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 12/130 (9%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+L L F + ++ ++ T+NGE I+ + ++++ +
Sbjct: 15 ILIIALALFSFVLADVIRSGGFSGKDNSIATVNGEEISREEFARQVEAYQQNMRGNISTT 74
Query: 75 IAVQELIVETLKK----QEIEKSGITFDSNTVNYFFVQHARNTGLSA-EDFSSFLDKQGI 129
AV + + L + +++EK GI + V +S F++ +
Sbjct: 75 QAVNRVWDQELNQIIVEEQVEKLGIRAEQAQVRQMM-----RAQMSQNPQFTN--EAGMF 127
Query: 130 GDNHFKQYLA 139
+N K+Y+A
Sbjct: 128 DENRVKEYVA 137
>gi|307823841|ref|ZP_07654069.1| nitrogen fixation protein NifM [Methylobacter tundripaludum SV96]
gi|307735135|gb|EFO05984.1| nitrogen fixation protein NifM [Methylobacter tundripaludum SV96]
Length = 292
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 78/245 (31%), Gaps = 8/245 (3%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ + A+ E +E+ E + + + + + + + F S L+K +
Sbjct: 37 QAQIQALNEFRIESRVLNTPEAAAVIITDQELQHAYQEIRDRYD-DEDAFFSDLEKNRLS 95
Query: 131 DNHFKQYLAIQSIWPDVVK--NDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ L Q V++ +++ I + + + + SI
Sbjct: 96 KASLQAALHRQCKVNTVLESIASHAPAISEIDIGIYYHLHAEQFNCPERREVSHIFISIN 155
Query: 189 DNKLQN--QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ +N + + + + AE+ + K + + + + G + L+P+
Sbjct: 156 PDYAENTPEAALSRAQELAEKLHKKPHKFADLALRHSECPTALQGGVLGIVPRGTLYPEL 215
Query: 247 QNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE--AE 303
+L ++ ++ G+ + + KA + + +
Sbjct: 216 DAVLFNLKPGEVSDVVKSEIGLHLLLCKSIQKAETLSLAKATPKIRQLMKERARRTCQRA 275
Query: 304 YVKKL 308
++ L
Sbjct: 276 WLAGL 280
>gi|293375521|ref|ZP_06621798.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter
sanguinis PC909]
gi|325840213|ref|ZP_08166980.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter sp.
HGF1]
gi|292645861|gb|EFF63894.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter
sanguinis PC909]
gi|325490361|gb|EGC92686.1| peptidylprolyl isomerase PrsA1 family protein [Turicibacter sp.
HGF1]
Length = 239
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 87/277 (31%), Gaps = 42/277 (15%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDS 99
S++ + IT+ +++ I L+ Q+ + Q+L+ E + +Q
Sbjct: 2 SKVLAKVKNYEITEEMLNETIDALRAQQNINLTTEEQKQDLLDELVARQL-------VVE 54
Query: 100 NTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ + + E+F +++++ SI
Sbjct: 55 DAIESGLTE--------TEEFQKL----------YREFIFQHSI------GQMFKTINVT 90
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKL 219
+ E A + ++ +E +R + + + + + A+ +L
Sbjct: 91 DAECEAYYNENQD-QFKEETVRAAHILVDEEAKAED-LLNQINEGADFHQL--------A 140
Query: 220 EKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDL 278
+ +S G + P+F Q + + +Q G I + DK++
Sbjct: 141 SEHSSCPSGARGGDLGDFGRGQMVPEFEQAAFALNIGEISGVVKSQFGYHLIKLLDKKET 200
Query: 279 GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + K + + + + L+S +
Sbjct: 201 VPFTDVLPQIKQYLVTKKQNEMYSAFTQGLKSKYTVE 237
>gi|326576612|gb|EGE26519.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 101P30B1]
Length = 617
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 82/297 (27%), Gaps = 78/297 (26%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 81 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 140
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 141 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 200
Query: 156 YGNLEMEIPANKQKMKN------------------------ITVREYLIRTVLFSIPDNK 191
+ +I A + ++ T +E + + + +N
Sbjct: 201 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANY-LRENG 259
Query: 192 LQNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + + +++ R K E A D G ++ S
Sbjct: 260 ITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSV 319
Query: 246 F--------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
F Q L S + P T G + + + A + Q
Sbjct: 320 FGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 373
>gi|326565373|gb|EGE15551.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 12P80B1]
Length = 614
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 82/297 (27%), Gaps = 78/297 (26%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 78 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 137
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 138 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 197
Query: 156 YGNLEMEIPANKQKMKN------------------------ITVREYLIRTVLFSIPDNK 191
+ +I A + ++ T +E + + + +N
Sbjct: 198 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANY-LRENG 256
Query: 192 LQNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + + +++ R K E A D G ++ S
Sbjct: 257 ITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSV 316
Query: 246 F--------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
F Q L S + P T G + + + A + Q
Sbjct: 317 FGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 370
>gi|167761296|ref|ZP_02433423.1| hypothetical protein CLOSCI_03701 [Clostridium scindens ATCC 35704]
gi|167660962|gb|EDS05092.1| hypothetical protein CLOSCI_03701 [Clostridium scindens ATCC 35704]
Length = 428
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 71 ELEKIAVQELIVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
EL A++ I L + I K+ I ++ + A + + + F+D+
Sbjct: 347 ELRPQAIKR-IETRLVLEAIAKAENIEISDEKLDEELAKMAESYKMEVDKLKEFMDEN-- 403
Query: 130 GDNHFKQYLAIQSIWPDVVKN 150
K+ +A+Q +++N
Sbjct: 404 EKKQMKEDMAVQEAITFLIEN 424
>gi|309378643|emb|CBX22714.1| putative cell-binding factor [Neisseria lactamica Y92-1009]
Length = 288
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 86/300 (28%), Gaps = 25/300 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE----LEKIAV 77
I V +++ + + T+NG+ I I ++A + + + E L + +
Sbjct: 3 AKILTSVALLACSGSLFAQTL-ATVNGQKIDSSVIDAQVAAFRAENSSAEDSPQLRRALL 61
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
+ I T+ QE+++ + + S +D Q
Sbjct: 62 NQEITHTVVAQEVKRLKLDRS-AEFKDMLAKLRAEAEKSGDDKKP-------SFKTVWQA 113
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
+ E + A ++ +E + +L +
Sbjct: 114 VEYGLN-GRAYALHIAKTQPVSEQDAKAAYDNIRGFYKGTQEVQLGEIL--TDKEDNAKK 170
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ K ++ L+ + ++ V + E + P +Q + +
Sbjct: 171 AVAGLKAKKGFDAVLKQYSLNDHTKQTGKPDGYVPLKDL----EQGVPPLYQAIKDLKKG 226
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P + D+RD+ + + Q T + V L A I
Sbjct: 227 EFTATPLKNGDFYGVYYVNDRRDVK--VPSFDEMKEQLTGDLQAERIDRAVGALLDKADI 284
>gi|31983504|ref|NP_858118.1| peptidylprolyl isomerase [Lactococcus lactis subsp. cremoris]
gi|13491881|gb|AAK27980.1|AF247159_5 PrtM precursor [Lactococcus lactis subsp. cremoris]
Length = 299
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 91/270 (33%), Gaps = 50/270 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + + ++S + + T +G +T+ + K K + +
Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTES------SFYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + + TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK+ L + +F+ + +K+K ++ + Q
Sbjct: 111 FKESL----------RTNFLSEV---------ALKKLKKVSESQ-------LKAAWKTYQ 144
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLESDLHPQ---- 245
+ VQ + E++ ++ D + FA D + + +L+ +
Sbjct: 145 PKVTVQHILTSDEDTAKQVISDLASGKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDA 204
Query: 246 -FQN-LLKKSQNNTTN-PYVTQKGVEYIAI 272
F++ K + T P G E I +
Sbjct: 205 TFKDAAYKLKNGDYTQTPVKVTDGYEVIKM 234
>gi|296112838|ref|YP_003626776.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis RH4]
gi|295920532|gb|ADG60883.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis RH4]
gi|326561505|gb|EGE11849.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 46P47B1]
gi|326567538|gb|EGE17653.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis BC1]
gi|326571415|gb|EGE21430.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis BC7]
Length = 617
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 80/296 (27%), Gaps = 76/296 (25%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 81 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 140
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 141 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 200
Query: 156 YGNLEMEIPA---------NKQKMKNITVREYLIRTVLFSIP--------------DNKL 192
+ +I A K +++ E + P +N +
Sbjct: 201 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANYLRENGI 260
Query: 193 QNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ + + + +++ R K E A D G ++ S F
Sbjct: 261 TDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSVF 320
Query: 247 --------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
Q L S + P T G + + + A + Q
Sbjct: 321 GEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 373
>gi|228904075|ref|ZP_04068170.1| S-layer y domain protein [Bacillus thuringiensis IBL 4222]
gi|228855160|gb|EEM99724.1| S-layer y domain protein [Bacillus thuringiensis IBL 4222]
Length = 876
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 107/300 (35%), Gaps = 28/300 (9%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWA-MSSRIRTTI---NGEVITDGDISKRIALLKL 65
S+ KL TT V++ P S +++ + N E + G+++++ LLKL
Sbjct: 4 SNITKLATTGLVVLGALTFPSSSLAEVGNQATKKIEMVQEQNQETVKSGEVTQK-DLLKL 62
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
Q + EK+ E + LK+Q+ ++ IT ++ + FV+ L + L
Sbjct: 63 QDYLKQQEKLFADE---DKLKEQQNKEKDITVENKELENKFVE------LQTKQ--DKLA 111
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
K+ FK+ + +P +E E A K+ +K + ++ V
Sbjct: 112 KE---IQTFKESIK----YPSETVGVEKKDENKVETEQDAEKEYVKKREDNKKAVKEVQD 164
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + K++ + ++ A++ K +L+ + E
Sbjct: 165 KLQELKVKEEQQKKEAELKAKQEAELKAKQEAELKAKEESDSKAKVEAETKAKEEADAKV 224
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD---LGGEIALKAYLSAQNTPTKIEKHEA 302
+ K++ ++ E DK + + E K + + +K
Sbjct: 225 KKEAEDKAK--LDAETKAKQEAELKEKQDKEEKAKVEAETKAKQESELKVKEEQEKKDAE 282
>gi|158521717|ref|YP_001529587.1| SurA domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510543|gb|ABW67510.1| SurA domain [Desulfococcus oleovorans Hxd3]
Length = 232
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 6/96 (6%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED--FSSFLDKQGI 129
++ +++L E + + + GI + + F L + I
Sbjct: 85 VKARLLKQLTEELILARRAQDLGIAVSDAELEKAVAHITE----DYPEGVFEQTLLENAI 140
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ +K L + V++ + M K E A
Sbjct: 141 PFDVWKARLKAGMLMEKVIERELMEKMVITPEEASA 176
>gi|74662494|sp|Q7RYY4|PIN4_NEUCR RecName: Full=Peptidyl-prolyl cis-trans isomerase pin-4;
Short=PPIase pin-4; AltName: Full=Parvulin-14;
Short=Par14
Length = 130
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260
K+ +++R D + + S+ + G + + L P+F+ + ++T++P
Sbjct: 51 KKEEALAKIRDGADFGAVAREYSEDKARTGGSLGWKQKGTLDPEFEKVAFALETSSTSSP 110
Query: 261 Y----VTQKGVEYIAICDKR 276
TQ G I + K+
Sbjct: 111 KIGEVKTQFGYHIIMVEGKK 130
>gi|326575303|gb|EGE25231.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis CO72]
Length = 614
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 80/296 (27%), Gaps = 76/296 (25%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 78 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 137
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 138 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 197
Query: 156 YGNLEMEIPA---------NKQKMKNITVREYLIRTVLFSIP--------------DNKL 192
+ +I A K +++ E + P +N +
Sbjct: 198 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANYLRENGI 257
Query: 193 QNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
+ + + + +++ R K E A D G ++ S F
Sbjct: 258 TDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSVF 317
Query: 247 --------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
Q L S + P T G + + + A + Q
Sbjct: 318 GEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 370
>gi|99082290|ref|YP_614444.1| AraC family transcriptional regulator [Ruegeria sp. TM1040]
gi|99038570|gb|ABF65182.1| transcriptional regulator, AraC family /
DNA-O6-methylguanine--protein-cysteine
S-methyltransferase / Transcriptional regulator Ada
[Ruegeria sp. TM1040]
Length = 283
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 82 VETLKKQEIEKSGITFDSNTV-NYFFVQHARNTGLSAEDFSSFLDK-QGIGDNHFKQYLA 139
E + + I + + A G+SA F G+ ++QYL
Sbjct: 4 DEQAYHYGVIRRAIEVIDADGGDLSLEELAARMGMSAAHFQRVFSSWAGVSPKRYQQYLR 63
Query: 140 IQ 141
+
Sbjct: 64 LG 65
>gi|289668772|ref|ZP_06489847.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 656
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGD 131
+ +L+ E + + E +GI TV + + S + + + L + G
Sbjct: 107 QVLDQLVDEQVVRLGAEDAGIVIGDATVRDYIANIQAFQVDGKFSPDQYRAALAQ-GTPP 165
Query: 132 NH 133
Sbjct: 166 RT 167
Score = 35.8 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKNAGGDLGWVEKGAMVKPFEDALFSMKAGDVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + Q +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADADK 414
>gi|289664180|ref|ZP_06485761.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 656
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGD 131
+ +L+ E + + E +GI TV + + S + + + L + G
Sbjct: 107 QVLDQLVDEQVVRLGAEDAGIVIGDATVRDYIANIQAFQVDGKFSPDQYRAALAQ-GTPP 165
Query: 132 NH 133
Sbjct: 166 RT 167
Score = 35.8 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKNAGGDLGWVEKGAMVKPFEDALFSMKAGDVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + Q +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADADK 414
>gi|326561079|gb|EGE11444.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis 7169]
Length = 614
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 82/297 (27%), Gaps = 78/297 (26%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 78 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 137
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 138 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 197
Query: 156 YGNLEMEIPANKQKMKN------------------------ITVREYLIRTVLFSIPDNK 191
+ +I A + ++ T +E + + + +N
Sbjct: 198 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANY-LRENG 256
Query: 192 LQNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + + +++ R K E A D G ++ S
Sbjct: 257 ITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSV 316
Query: 246 F--------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
F Q L S + P T G + + + A + Q
Sbjct: 317 FGEYAASVEQALSGLSVGQISQPVQTGFGYHIFKVTK---VSNDTPNIASMRDQLMD 370
>gi|326387876|ref|ZP_08209482.1| hypothetical protein Y88_0791 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207922|gb|EGD58733.1| hypothetical protein Y88_0791 [Novosphingobium nitrogenifigens DSM
19370]
Length = 645
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 80/272 (29%), Gaps = 36/272 (13%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI------------RTTINGEVITDGDI 56
L F ++ + F ++ + ++ ++A + T+ I+ ++
Sbjct: 2 LGFFRAIIKSRFGAVLGLVFLVLIVLAFAGADVSGLRTGNLFGGDDVATVGHTGISSREL 61
Query: 57 SK--RIALLKLQKINGELE-------KIAVQE----LIVETLKKQEIEKSGITFDSNTVN 103
K R A ++ L + A++E LI ++ +K+GI ++
Sbjct: 62 DKTVRAAFDGERQRTPTLTMKDFVTSQNALEEVLSGLIDRAAVQEWGQKNGIGVSDRLID 121
Query: 104 YFFVQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNL 159
+ + S + ++ + ++G+ D ++ +A ++
Sbjct: 122 SEIAKLPAFQGPDGKFSQQVYNQLIAQRGLTDKQVREDIAKGL-MGKLIMAGASEGAAMP 180
Query: 160 EMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ------KRIKDAEESRLRLP 213
+ +K L+ P +Q R + E +R
Sbjct: 181 NGVAQRYAELLKEKRSGGILMLPSQAFAPKAPATDQQVADFYKANIVRYQRPERRTIRYV 240
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
K D I K + P
Sbjct: 241 LVDEAAIKNLGAPSDADIQKRYQANAALYAPN 272
>gi|15675004|ref|NP_269178.1| hypothetical protein SPy_0996 [Streptococcus phage 370.3]
gi|13622152|gb|AAK33899.1| hypothetical protein SPy_0996 [Streptococcus phage 370.3]
Length = 682
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 67/186 (36%), Gaps = 32/186 (17%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS------NTVNYF---FVQHARNTGL 115
+Q K AVQ +I E+L + I G+TF + + R L
Sbjct: 376 VQNRESRSRKEAVQNMIDESL--ETITDLGMTFQEFLQGIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
++F ++++G+ N K+ + V + E+ + +KN+ +
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK-------EVDER-------TDKELEEFRATLKNLAL 479
Query: 176 REYLIRTV-----LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS 230
E I+ + + IP K K + +E SRL N + +K ++
Sbjct: 480 PEEAIKKITEAIKVDDIPSIKQSFDDLKNKVSETSETSRLNAEILGNNGKTRYNK--NLL 537
Query: 231 IGKAQY 236
+G
Sbjct: 538 VGDPNR 543
>gi|210622772|ref|ZP_03293347.1| hypothetical protein CLOHIR_01295 [Clostridium hiranonis DSM 13275]
gi|210154056|gb|EEA85062.1| hypothetical protein CLOHIR_01295 [Clostridium hiranonis DSM 13275]
Length = 166
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 53/157 (33%), Gaps = 16/157 (10%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK--------------LQKI 68
+ + + A S +N IT D+ A++ ++
Sbjct: 6 LAIALGMVAVLSLTACSKGTVAKVNDTEITADDLKVAKAIITSVNEYKTGKDAEDMSKEE 65
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
ELEK A L+ + Q+ GIT S + + + F L+ G
Sbjct: 66 EEELEKNAATFLVDSEVVYQQAIADGITVKSEDNDSRTSELKEALKENP-KFKKDLEDNG 124
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA 165
+ + + ++A ++ ++ F K + EI A
Sbjct: 125 VTEEALENFIAKDNVINAY-RDAFNEKQTVSDAEISA 160
>gi|333029340|ref|ZP_08457401.1| hypothetical protein Bcop_0200 [Bacteroides coprosuis DSM 18011]
gi|332739937|gb|EGJ70419.1| hypothetical protein Bcop_0200 [Bacteroides coprosuis DSM 18011]
Length = 493
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 41/107 (38%), Gaps = 13/107 (12%)
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEE-----SRLRLPKDCNKLEKFASKIHDVSIG 232
+L+R + + + K ++A +L K S +
Sbjct: 115 FLLRQIFMPVGQRVSYQEE--NKIKEEANAVFEQYLAKPSNSLFEELIKQYSFDKNTK-- 170
Query: 233 KAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDL 278
++ + + +FQ +++ S+ + P++T +G+ + D++ +
Sbjct: 171 ---WVSQEEETSEFQTIVELLSKGEISRPFITPRGIHIVQKMDEKTV 214
>gi|73662398|ref|YP_301179.1| trigger factor [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|119370940|sp|Q49YA7|TIG_STAS1 RecName: Full=Trigger factor; Short=TF
gi|72494913|dbj|BAE18234.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 436
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVET-------LKKQEIEKS-GITFDSNTVNYFFVQ 108
+ + L +I+G+ E +++ + L I + I + ++ +
Sbjct: 326 QQGLNLETYFQISGQDESQLREQMKDDAEERVKTNLTLTAIADAEDIEVSDDDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ +S ED L I K + IQ + +V +++ + E
Sbjct: 386 MSEQFNISVEDIKQTLGNTDI----VKNDVRIQKVIDLLVDEAKLVEPSKDDSEA 436
>gi|332016995|gb|EGI57794.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Acromyrmex
echinatior]
Length = 127
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Query: 199 QKRIKDAEES-RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK----- 252
+K+ K E +L+ + N++ S+ S G ++ + FQ+
Sbjct: 42 EKQSKILEALEKLKAGQKFNEIAATYSEDKARSGGDLGWMTRGSMVGPFQDAAFALPVSS 101
Query: 253 --SQNNTTNPYVTQKGVEYIAICDKR 276
S T P T+ G I + K+
Sbjct: 102 LGSPVYTDPPVKTKFGYHIIMVEGKK 127
>gi|310815590|ref|YP_003963554.1| peptidyl-prolyl cis-trans isomerase D, putative [Ketogulonicigenium
vulgare Y25]
gi|308754325|gb|ADO42254.1| peptidyl-prolyl cis-trans isomerase D, putative [Ketogulonicigenium
vulgare Y25]
Length = 612
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS----A 117
+ Q++ G E +A ++L+ E + E + G++ V Q + GL+
Sbjct: 71 FAQFQQMGG--EAMAREQLVQERALENEASRIGLSVGDLYVARQIQQISAFQGLTGGFSL 128
Query: 118 EDFSSFLDKQGIGDNHFKQ 136
E + + L + G+ + F+
Sbjct: 129 ETYRAALRQVGLAERQFED 147
>gi|309792550|ref|ZP_07687012.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris
trichoides DG6]
gi|308225364|gb|EFO79130.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oscillochloris
trichoides DG6]
Length = 523
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 56/202 (27%), Gaps = 27/202 (13%)
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIP 188
+ F+ L Q ++ K P +T R+ L+ V
Sbjct: 244 LTKEDFRAALTAQYH-EQLLNTRVQEKLVPEAEFTP--GDVPTKVTARQILVA-VTPPAE 299
Query: 189 DNKLQNQGF--VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE----- 239
+ Q K DA + LR D L S + G +
Sbjct: 300 ATQEQIDALFVTAKARADALLADLRNGADFATLAAEESDDPGSASMGGDLGSFDKDGKAD 359
Query: 240 --SDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKR-DLGGEIALKAYLSAQNTPT 295
+ P+ N + P TQ G + + D+ + +A A +
Sbjct: 360 NGATYPPELVAAALALPANTLSEPVRTQFGWHILEVTDRTVPTEEDQLREARTKALD--- 416
Query: 296 KIEKHEAEYVKKLRSNAIIHYY 317
+++ + RS + +
Sbjct: 417 -------DWLTQQRSAIAVQRF 431
>gi|326431789|gb|EGD77359.1| parvulin-type peptidyl-prolyl cis-trans isomerase [Salpingoeca sp.
ATCC 50818]
Length = 149
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 9/110 (8%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC-NKLEKFASKIHDVSIGKA 234
+R +L +Q +++ K A+ + + K+ S+ S G
Sbjct: 40 TNVEVRHILCEKHSKAMQALEQLRQAYKPADGGKPQTGYSTWIKVASEFSEDKAKSGGNL 99
Query: 235 QYLLESDLHPQFQNL-----LKKSQNNT---TNPYVTQKGVEYIAICDKR 276
++ + FQ+ + K P T+ G I + +K+
Sbjct: 100 GWMARGSMVGPFQDAAFALEVSKPNGPVIFTDPPVKTKFGYHIIMVTNKK 149
>gi|83589867|ref|YP_429876.1| hypothetical protein Moth_1019 [Moorella thermoacetica ATCC 39073]
gi|83572781|gb|ABC19333.1| Protein of unknown function DUF218 [Moorella thermoacetica ATCC
39073]
Length = 461
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 76/227 (33%), Gaps = 56/227 (24%)
Query: 21 VLIIFCIVPIVSYKSWAMSS-------RIRTTINGEVITDGDISKRIALLKLQKINGELE 73
LI+ ++ I+++ + A SS +NG+ I
Sbjct: 213 ALIVMTLLSILAFTACARSSQSPKEIEEAVALVNGQPI---------------------N 251
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQ----- 127
K A+++ E L+ Q + + + + +++ F Q R+ + +S E+ +L +
Sbjct: 252 KEALEK---EMLRMQLMAEMRVQSGTVSIDEFLKQSGRDWSKMSPEEKRYYLRAKRQSEM 308
Query: 128 -GIGDNHFKQYLAIQSIWPDVV-----------KNDFMLKYGNLEMEIPANKQKMKNITV 175
G + F + + + ++ + V + + + + + K
Sbjct: 309 TGEKNEAFNRLVREEVLYQEAVKEGYEVSIDEARRRYQEIETLSQESLKEALKDAKAKEE 368
Query: 176 REYL-------IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
E L + + F+ P+ + + R R + D
Sbjct: 369 IERLQEVEKKFMELMGFTSPEALTEYRVQRLMRTMPISRLREKFKAD 415
>gi|95930624|ref|ZP_01313358.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas
acetoxidans DSM 684]
gi|95133276|gb|EAT14941.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfuromonas
acetoxidans DSM 684]
Length = 93
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Query: 213 PKDCNK-LEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYI 270
D + +KF+ G + +F ++ + P TQ G I
Sbjct: 28 ATDFAECAQKFSQCPSGRKGGDLGQFAPGQMVKEFDEVVFSGEVGKVLGPVKTQFGYHLI 87
Query: 271 AICDK 275
+ +
Sbjct: 88 EVTKR 92
>gi|326318802|ref|YP_004236474.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323375638|gb|ADX47907.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 299
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKA 234
+ +R +L I ++ ++K ++ L+ D +L K S G
Sbjct: 142 QVQVRHIL--IAGTGADSRAQIEKIEQE-----LKGGADFAQLAKERSADKGSAAKGGDL 194
Query: 235 QYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLS 289
+ + P+F + ++ G + + + R + +
Sbjct: 195 GFFEAGKMVPEFDKAAFALTKPGQLSGIVESKFGYHILQLEGRHAARTRSFDEVRSELMQ 254
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314
+ E A+ + L+ A I
Sbjct: 255 EVRANVQQEARVAD-AQALQQEAKI 278
>gi|284035739|ref|YP_003385669.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
gi|283815032|gb|ADB36870.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
Length = 797
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 40/131 (30%), Gaps = 8/131 (6%)
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K + + + +L + + + + ++L+ + ++ + S
Sbjct: 226 KVNNRRPSRGRVRVAHILVRMSPAADEAGQKAAQERINKVYAQLQRGESFEQVCRLVS-- 283
Query: 227 HDVSIGKAQYLLESDLHPQFQNLLK------KSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
D + +L ++ + + + P T G I + +++ L
Sbjct: 284 DDATSKANGGVLPPFEPGRWVPAFEDAAFALSKPGDYSKPVKTNYGWHIIKLIERKGLES 343
Query: 281 EIALKAYLSAQ 291
L L +
Sbjct: 344 FTTLAPSLRQR 354
Score = 36.9 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 4/133 (3%)
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI--HDVSI 231
+ + + + + V + + + D KL + SK +
Sbjct: 126 MQEDVNASHIFIPVSEYAQPSDTLVAYQTIMSLRKQALEGTDFTKLARENSKDVKTAQNG 185
Query: 232 GKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA 290
G Y+ + + + N + P T+ G + + ++R G A++
Sbjct: 186 GSLGYIAAFENVYPLETAAYTTPVNGISMPVRTRFGYHILKVNNRRPSRG-RVRVAHILV 244
Query: 291 QNTPTKIEKHEAE 303
+ +P E +
Sbjct: 245 RMSPAADEAGQKA 257
>gi|34556675|ref|NP_906490.1| hypothetical protein WS0233 [Wolinella succinogenes DSM 1740]
gi|34482389|emb|CAE09390.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 485
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 31/109 (28%), Gaps = 16/109 (14%)
Query: 43 RTTINGEVITDGDISKRIALL-------------KLQKINGELEKIAVQELIVETLKKQE 89
+ IT ++ + A L K Q +EK A+ LI +TL
Sbjct: 43 VAKVGETKITQTELEQEYARLYEFYNKIVGGSLDKEQAKALGIEKQALDSLISKTLMLNF 102
Query: 90 IEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ G+ V + + L++ F+
Sbjct: 103 AKDVGLRVSDEEVAKAVVKMEAFHVEGKFDDKTYRKVLEENHYKPAAFE 151
>gi|93278583|pdb|1ZK6|A Chain A, Nmr Solution Structure Of B. Subtilis Prsa Ppiase
Length = 93
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 197 FVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYL-LESDLHPQF-QNLLKKS 253
K+ + E +L+ + L K S S G + E + F + K
Sbjct: 12 VADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLK 71
Query: 254 QNNTTNPYVTQKGVEYIA 271
++P TQ G I
Sbjct: 72 TGEVSDPVKTQYGYHIIK 89
>gi|39997591|ref|NP_953542.1| hypothetical protein GSU2496 [Geobacter sulfurreducens PCA]
gi|39984483|gb|AAR35869.1| hypothetical protein GSU2496 [Geobacter sulfurreducens PCA]
Length = 571
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 74/292 (25%), Gaps = 67/292 (22%)
Query: 24 IFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-----ALLKLQKINGELEKIAVQ 78
+ I V S + T+N E IT D++ + + + ++ +
Sbjct: 41 VMTIRVKVPLFSPLFAEFPVATVNDEPITVNDLNASLETVHEGMTEGKQAPRRNFTDILN 100
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
+I L QE G+ D + FS L ++ + +H K +
Sbjct: 101 RIITSKLIIQEGRNIGL--DQQE----------QPKEMIDTFSRKLLRELVLKDHVKD-I 147
Query: 139 AIQSIWPDVVKNDFML-------KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
P V+ + + E A K + + +
Sbjct: 148 RPD---PKEVEKRYGQLNVEWTFSTLTFKNEEDAKKARKALDKGTSF-----------DA 193
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK 251
L + +KR + + +L+ +HP ++
Sbjct: 194 LVAEEVKEKRAEAKQNEKLKY---------------------------EHIHPDIVKIID 226
Query: 252 K-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
QKG + + T + + E
Sbjct: 227 SLKPGAVGPVIDMQKGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEK 278
>gi|224369908|ref|YP_002604072.1| PpiC2 [Desulfobacterium autotrophicum HRM2]
gi|223692625|gb|ACN15908.1| PpiC2 [Desulfobacterium autotrophicum HRM2]
Length = 225
Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 11/136 (8%)
Query: 48 GEVITDGDISKRIALLK------LQKINGELEKIAVQ---ELIVETLKKQEIEKSGITFD 98
VITD + S+ + L + +QK E + ++ +L E + ++ GI
Sbjct: 37 DLVITDREFSEELELKRAAYPYGIQKNPNEYNTLVIELVDQLSEELVLRRAARDRGIYVT 96
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ + F L + + ++ L + ++ ++ D
Sbjct: 97 DQELKANEEAF--RQDYPEDSFEKLLVENAVSHRFWRHRLKLSLLFDRLIDKDLRQNIEI 154
Query: 159 LEMEIPANKQKMKNIT 174
E+ A +KN T
Sbjct: 155 TPREMIACYNDLKNST 170
>gi|313681990|ref|YP_004059728.1| hypothetical protein Sulku_0862 [Sulfuricurvum kujiense DSM 16994]
gi|313154850|gb|ADR33528.1| hypothetical protein Sulku_0862 [Sulfuricurvum kujiense DSM 16994]
Length = 488
Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 59/179 (32%), Gaps = 20/179 (11%)
Query: 43 RTTINGEVITDGDISK-------------RIALLKLQKINGELEKIAVQELIVETLKKQE 89
+ IT ++ K + + Q L++ A+++L+ + L
Sbjct: 43 VAKVGDISITSAELQKSYSNLFNQYNQLFQGKFDEKQAQQFGLQRQALRQLVNQALVLNL 102
Query: 90 IEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
G+T + +++ ++ L + + +++ + + +
Sbjct: 103 ANSYGLTVTDQELWDVIKSQSAFSKDGTFDKSTYAEVLKQNRLTIKEYEESMKKELLIQK 162
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMKNITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKD 204
+ ++L G +E + Y ++ + S+ + + F +KR D
Sbjct: 163 TL---YLLSSGVKPIEENTLADALGVSDKISYKILTPDMISLAPTDAELKAFWEKRSGD 218
>gi|222055722|ref|YP_002538084.1| trigger factor [Geobacter sp. FRC-32]
gi|254789003|sp|B9M0Y0|TIG_GEOSF RecName: Full=Trigger factor; Short=TF
gi|221565011|gb|ACM20983.1| trigger factor [Geobacter sp. FRC-32]
Length = 435
Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 26/94 (27%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
+ A ++ L K I + V+ Q A+ E + F +
Sbjct: 341 KAQFRSAAETQVKGSILLDALARKESIEVTAAEVDEKLEQIAQQNNQDLEQVNKFYQQNA 400
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
+ L ++ + + E++
Sbjct: 401 QAKENLSAQLKEDKAIELLLSKATVTEVERKELD 434
>gi|159030471|emb|CAO91375.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 248
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 43/250 (17%), Positives = 86/250 (34%), Gaps = 32/250 (12%)
Query: 51 ITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHA 110
IT DI K++ L ++ +I + E+ GI ++ + ++
Sbjct: 7 ITAEDILKQVKL-------SLKTSELIEAIITRKMIANTAEEIGIKLEAEELQEMADKYR 59
Query: 111 RNTGL-SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP---AN 166
+ L S ED +++ K + + F++++ Q + + + F K E A
Sbjct: 60 KMYKLLSEEDTWAWMKKNHLSLDDFEEFVYYQGLSTKLAVHLFADKIEPYFYEHQLDYAG 119
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
+ + E L + +SI + ++ K I+D E R
Sbjct: 120 VVMHEVVLEDEDLAMELFYSIQEGEMSFYDVAHKYIEDKELRRK---------------- 163
Query: 227 HDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALK 285
G L DL P+ + + P VT KGV I + + + + L+
Sbjct: 164 ----GGYRGILSRKDLKPEISAAVFAATPPEVLKPIVTSKGVHLILVEEIIERKLDNWLR 219
Query: 286 AYLSAQNTPT 295
++
Sbjct: 220 NKIATDLFND 229
>gi|150388633|ref|YP_001318682.1| hypothetical protein Amet_0798 [Alkaliphilus metalliredigens QYMF]
gi|149948495|gb|ABR47023.1| hypothetical protein Amet_0798 [Alkaliphilus metalliredigens QYMF]
Length = 233
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 15/168 (8%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING---- 70
+ + ++ + T+NG IT + KL
Sbjct: 9 FIVVGLIALLVIGCASEGENLSQDQGEVVATVNGASITREVFENTVERTKLNYQQQGIEF 68
Query: 71 ----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF 120
++ + A+ L+ E + QE ++ G + E
Sbjct: 69 EGEEGEAMLVQVREQALNSLLQEEVLLQEAKEKGYDVSEEAIETELESMKGQFESEEEFE 128
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
++ Q ++ + LA + ++N+ + E Q
Sbjct: 129 AALEFNQ-FTEDDLRNMLASEMAIEQFLQNELEEAPASDEEAQELYDQ 175
>gi|303253594|ref|ZP_07339732.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307245913|ref|ZP_07527996.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247999|ref|ZP_07530028.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307254886|ref|ZP_07536708.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257049|ref|ZP_07538824.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259327|ref|ZP_07541054.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|302647514|gb|EFL77732.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306853132|gb|EFM85354.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306855397|gb|EFM87571.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306862127|gb|EFM94099.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864420|gb|EFM96328.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866563|gb|EFM98424.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 625
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 19/155 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAKNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSPVFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
S + + L G+ + + + ++ + +
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEG 167
>gi|262372382|ref|ZP_06065661.1| AraC-type DNA-binding domain-containing protein [Acinetobacter
junii SH205]
gi|262312407|gb|EEY93492.1| AraC-type DNA-binding domain-containing protein [Acinetobacter
junii SH205]
Length = 353
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 5/44 (11%), Positives = 12/44 (27%)
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
A+ +S L ++G+ K + +
Sbjct: 257 AELKDIAQQMNMSTATIQRRLKQEGVSYQQLKNNIRCDIAIERL 300
>gi|311029004|ref|ZP_07707094.1| hypothetical protein Bm3-1_00328 [Bacillus sp. m3-13]
gi|311032299|ref|ZP_07710389.1| hypothetical protein Bm3-1_17466 [Bacillus sp. m3-13]
Length = 309
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 85/244 (34%), Gaps = 34/244 (13%)
Query: 39 SSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFD 98
+ I T+ VIT D+ L+++ G + + +++ + KQ +K +T
Sbjct: 50 QANIVATVGDTVITRKDM--------LEELEGMYGQEMLTKMVNNEVVKQIAKKYKVTVS 101
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+V+ + + +S + K+ + +++ +
Sbjct: 102 EQSVDREW-------KMIKTMYSRSPLHTNTSEELVKEQIRS----SLLLEELLVKDVNI 150
Query: 159 LEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
E E+ + Q+ K + E + + ++ + K + V++ + + L +
Sbjct: 151 PEAELESYYQENKQLYTIEDAFHLSHIIV---ETKDEADAVVKELEDGSNFTSLAMEVST 207
Query: 217 NKLEKFASKIHDVSIGKAQYLL-ESDLHPQ--FQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
++ + G +L ES ++P + ++P + I +
Sbjct: 208 DE-------LTANQGGDLGFLTHESQVYPTAYMAEAANLKEKTWSDPISVDEKYAIIYLY 260
Query: 274 DKRD 277
+K D
Sbjct: 261 EKMD 264
>gi|307261487|ref|ZP_07543156.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868770|gb|EFN00578.1| Peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 625
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 19/155 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAKNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSSVFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
S + + L G+ + + + ++ + +
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEG 167
>gi|238853840|ref|ZP_04644205.1| mismatch repair ATPase [Lactobacillus gasseri 202-4]
gi|238833535|gb|EEQ25807.1| mismatch repair ATPase [Lactobacillus gasseri 202-4]
Length = 788
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 14/193 (7%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEI----EKSGITFDSNTVNYFF 106
+ D+ K +L+ I G+ A I L E + + + + +N
Sbjct: 467 MEFDLKKLAPTYRLRIGIPGQSNAFA----IAHQLGMNEAVVDKARDLMNDEDSDINKMI 522
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ T +AE L + K+ L W + + K E+ A
Sbjct: 523 ERLTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKSQEKADEMLAK 581
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K+K + + + +++ ++ + + R NK+ + K
Sbjct: 582 KRKQAEKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLANNKVLQREKKR 637
Query: 227 HDVSIGKAQYLLE 239
HDVS+G +L
Sbjct: 638 HDVSVGDNVKVLS 650
>gi|225010080|ref|ZP_03700552.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium MS024-3C]
gi|225005559|gb|EEG43509.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Flavobacteria
bacterium MS024-3C]
Length = 706
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 6/111 (5%)
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFAS----KIHDVSIGKAQYLLESDLHPQFQNLLKKS 253
++ K+A + K + A G + E + P+F + + +
Sbjct: 374 KEEARKEANRLLIEAKKSTTVFAELARDNSDGPTASRGGDLGFFQEGQMTPKFNDFVFSN 433
Query: 254 QNNTTNPYVTQKGVEYIAICDKRDL--GGEIALKAYLSAQNTPTKIEKHEA 302
+ T+ G + + DK+D+ ++ S Q T +
Sbjct: 434 SVDAIGLVETEFGFHIVRVDDKQDIFQIATLSRDVAPSEQTINTIFTQATK 484
>gi|116629097|ref|YP_814269.1| mismatch repair ATPase [Lactobacillus gasseri ATCC 33323]
gi|122273905|sp|Q045P1|MUTS2_LACGA RecName: Full=MutS2 protein
gi|116094679|gb|ABJ59831.1| Mismatch repair ATPase (MutS family) [Lactobacillus gasseri ATCC
33323]
Length = 791
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 14/193 (7%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEI----EKSGITFDSNTVNYFF 106
+ D+ K +L+ I G+ A I L E + + + + +N
Sbjct: 470 MEFDLKKLAPTYRLRIGIPGQSNAFA----IAHQLGMNEAVVDKARDLMNDEDSDINKMI 525
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ T +AE L + K+ L W + + K E+ A
Sbjct: 526 ERLTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKSQEKADEMLAK 584
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K+K + + + +++ ++ + + R NK+ + K
Sbjct: 585 KRKQAEKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLANNKVLQREKKR 640
Query: 227 HDVSIGKAQYLLE 239
HDVS+G +L
Sbjct: 641 HDVSVGDNVKVLS 653
>gi|32033981|ref|ZP_00134237.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208477|ref|YP_001053702.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae L20]
gi|126097269|gb|ABN74097.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 625
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 19/155 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGDTAAVKVNGTEITQQAFNAAKNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSSIFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
S + + L G+ + + + ++ + +
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEG 167
>gi|256545178|ref|ZP_05472544.1| hypothetical protein HMPREF0078_0801 [Anaerococcus vaginalis ATCC
51170]
gi|256399219|gb|EEU12830.1| hypothetical protein HMPREF0078_0801 [Anaerococcus vaginalis ATCC
51170]
Length = 300
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 19/112 (16%)
Query: 43 RTTINGEVITDGDISKRI-------------ALLKLQKINGE-----LEKIAVQELIVET 84
+N E I+ K + L + G+ LE + LI++
Sbjct: 32 VAVVNDEGISKELFEKELSYYQKFYLKKYGDKFLDSKSKKGDSNYKKLESELLDSLIMDQ 91
Query: 85 LKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
+++K+GI N + ++ S + + G+ ++ F++
Sbjct: 92 AMLNDLKKNGIKVTKNDSQEIIDKISQEIS-SKDSLIENVKSFGVTEDEFEE 142
>gi|257464029|ref|ZP_05628414.1| peptidyl-prolyl cis-trans isomerase [Fusobacterium sp. D12]
gi|317061550|ref|ZP_07926035.1| predicted protein [Fusobacterium sp. D12]
gi|313687226|gb|EFS24061.1| predicted protein [Fusobacterium sp. D12]
Length = 549
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 37 AMSSRIRTTINGEVITDGDISKRI-ALLKLQKINGELEK-------IAVQELIVETLKKQ 88
A ++ +NGE I+ I++ ALL G+ + IA Q++I + L Q
Sbjct: 39 AGETQYAYQLNGEKISKIKIAREENALLDQLNKMGQGKTSKDLISLIAFQKVINDELTLQ 98
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
E I S+ V + + + G + E F L QG F+
Sbjct: 99 LAEDMKIKVPSSEVKEEYEKIEESIG-NKEQFRRMLSVQGYSKKSFQA 145
>gi|302560250|ref|ZP_07312592.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302477868|gb|EFL40961.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 215
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 42/123 (34%), Gaps = 15/123 (12%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKI---------------NGELEKIAVQELIVETLKK 87
+ GE IT + R+ ++ + G L + + ++++ + +
Sbjct: 34 AAVVGGERITVSQLENRVDEVRAAQRAAVPDDAQYQQAIARTGTLTRDTLHSMVLDRVLE 93
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
+ +G++ V + TG + +++L + GI +Q +
Sbjct: 94 RAARDAGVSVTRKEVQQMRSGLEQQTGGAEALEAAWLQQYGIPPQRLDDNFRLQVQAQKL 153
Query: 148 VKN 150
+
Sbjct: 154 AQR 156
>gi|94984540|ref|YP_603904.1| trigger factor-like protein [Deinococcus geothermalis DSM 11300]
gi|118574069|sp|Q1J199|TIG_DEIGD RecName: Full=Trigger factor; Short=TF
gi|94554821|gb|ABF44735.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Deinococcus
geothermalis DSM 11300]
Length = 449
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L + E ++L +E L E G+ + A+ GL+ + L
Sbjct: 329 LSDLAKNAESRVKRDLALEKL----AEDLGVQLSDAEFSNTMNALAQANGLTPQQLQRQL 384
Query: 125 DKQGIGD 131
GI
Sbjct: 385 GPNGINA 391
>gi|112148585|gb|ABI13575.1| protease maturation protein precursor [Lactobacillus helveticus
CNRZ32]
Length = 301
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 71/235 (30%), Gaps = 23/235 (9%)
Query: 62 LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
K K + + + L+ + LK + +K I N + ++ F+
Sbjct: 45 FYKELKSSPSSKTVLANLLVYDALKAKYGKKLDIKKVDNEYESYKERYGS-------QFN 97
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+FL + G FK +++ +F+ + P +KQ ++Y
Sbjct: 98 NFLVQGGYTRASFK----------RMIQINFLSRIALESQIKPTDKQL--KAAWKDYQPS 145
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ I V +++ D + K + + + L+S
Sbjct: 146 ITVQHILTTSKATAEQVIEQLNDGKSFSSLAKKYSVDSSTSNNGGKLAAFNQENKSLDST 205
Query: 242 LHPQFQNLLKKSQNNTT-NPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT 295
L T P G E I + D G + +A L+ +
Sbjct: 206 FKNAAYKLED---GEYTKTPVKVTDGYEVIKMVKHPDKGNFESNRAELTKELYNK 257
>gi|309803457|ref|ZP_07697551.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 11V1-d]
gi|308164466|gb|EFO66719.1| putative peptidylprolyl isomerase PrsA1 [Lactobacillus iners
LactinV 11V1-d]
Length = 238
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 69/239 (28%), Gaps = 27/239 (11%)
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
+I TL++Q G VN + + G F L + G+ +K+ +
Sbjct: 2 IINRTLQQQ----YGSQVSKKKVNTAYDNARKQYG---ARFEMVLQQNGMTPEAYKESIQ 54
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ +++ A ++K + ++ +L +
Sbjct: 55 TNLL--------LQAALKDIKPITKAQEKKAWKEYQPKVRVQHILV--------EKEDTA 98
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
K++ + K + + ++ L F+ K T
Sbjct: 99 KKVIEELGKGASFKDLAKKYSTDTGTSKNAGKIEPFDSSDTTLDADFKEAAFKLKTGEYT 158
Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPT--KIEKHEAEYVKKLRSNAII 314
P TQ G I + G + K+ + A+ + + + + A +
Sbjct: 159 KKPVKTQFGYHIIKMIKHPSKGSFQSHKSEIIARIYQKMAQDQNVIKSVLGVVLKRANV 217
>gi|229823923|ref|ZP_04449992.1| hypothetical protein GCWU000282_01227 [Catonella morbi ATCC 51271]
gi|229786656|gb|EEP22770.1| hypothetical protein GCWU000282_01227 [Catonella morbi ATCC 51271]
Length = 325
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 43/320 (13%), Positives = 104/320 (32%), Gaps = 51/320 (15%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQ 66
T+L+ + F ++ + + + A + T+ + IT D+ ++
Sbjct: 4 TTLNRMM-----AFASVLVLSGAVANTATVAYAQDNIATVGDQTITKEDLYNQM------ 52
Query: 67 KINGELEKIAVQELIVET-LKKQEIEKSGI-TFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
+ + ++ +I++ L+ + + + V + E F L
Sbjct: 53 --KKDAGLVTLRSMILQKVLEMNASNAADLKKQAEDEVAKQIDKVGGE-----EKFQELL 105
Query: 125 DKQGI-GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
Q + FK + I++++ +VV +E N + + +
Sbjct: 106 TYQKLGSVEDFKNQIYIRNLFNEVVSKQIDQSDATIEDYY-------NNTYQPKMEAQHI 158
Query: 184 LFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY-LLESDL 242
L + + I + ++ ++L K SK G +
Sbjct: 159 LV-------DTEEEAKDIISKLDA-----GENFDELAKTYSKDGSAQQGGLLSPFTSGQM 206
Query: 243 HPQFQNLLK-KSQNNTT-NPYVTQKGVEYIAICD---KRDLGG--EIALKAYLSAQNTPT 295
+F++ +K ++ T P ++ G I + K+ + K YL ++
Sbjct: 207 VKEFEDGVKGQANGEYTKTPVKSKFGYHIIKTINNGEKKPFADIKDDVKKEYLDSKLKDQ 266
Query: 296 KIEKHEAEYVKKLRSNAIIH 315
K + + KL A +
Sbjct: 267 KF---SYKIIGKLIEAAKVQ 283
>gi|28198390|ref|NP_778704.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1]
gi|182681032|ref|YP_001829192.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
M23]
gi|28056460|gb|AAO28353.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1]
gi|182631142|gb|ACB91918.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa
M23]
gi|307579500|gb|ADN63469.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 655
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 50/173 (28%), Gaps = 12/173 (6%)
Query: 150 NDFMLKYGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+ + E + + + + +L + + + K K EE
Sbjct: 258 AAHLPRPTPSEAMLRKRYDAQQRGEAQNEQRKAAHILITAGADAASQKVAEAKAAKLVEE 317
Query: 208 SRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQ 264
+R + D L + S+ + G ++ + F++ L P T+
Sbjct: 318 AR-KPGADFAALARINSQDPGSKDAGGDLGWVQRGMMVKPFEDALFAMKVGEVVGPIKTE 376
Query: 265 KGVEYIAICDKRDL------GGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
G I + + + L A + ++ + + L N
Sbjct: 377 FGNHVIKLEEIKAAKQLPFEAVRDQLAAEQTKEDIDKAFNDVTGKLMDLLVKN 429
>gi|114567543|ref|YP_754697.1| hypothetical protein Swol_2032 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338478|gb|ABI69326.1| hypothetical protein Swol_2032 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 265
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 42 IRTTINGEVITDG----DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF 97
+ +NGE IT + +I + + + + +LI + GI
Sbjct: 94 VVARVNGETITASNWYWEKINKILQAEFNNKSIPSDAKILNDLIETKVISSAARSLGIYP 153
Query: 98 DSNTVNYFFVQHARNTG-LSAEDFSSFLDKQGIGDNHF 134
+ + + + L E+ + + GI ++ +
Sbjct: 154 PEDQIKAYIADQQKYMEILKPEEITILIQTWGISEDKY 191
>gi|325132900|gb|EGC55577.1| hypothetical protein NMBM6190_0280 [Neisseria meningitidis M6190]
Length = 288
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 87/300 (29%), Gaps = 25/300 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I V +++ + + T+NG+ I I ++A + + E Q L+
Sbjct: 3 AKILTSVALLACSGSLFAQTL-ATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSLL 61
Query: 82 V----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
T+ QE+++ + + S +D Q
Sbjct: 62 ENEVVNTVVAQEVKRLKLDRS-AEFKNALAKLRAEAKKSGDDKKP-------SFKTVWQA 113
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
+ + E E+ A + +E + +L +N +
Sbjct: 114 VKYGLN-GEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENA--KK 170
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
R K ++ L+ ++ ++ + + V + E + P +Q + +
Sbjct: 171 AVADLRAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYQAIKDLKKG 226
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P + D R++ + + Q + V L A I
Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVK--VPSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284
>gi|307822662|ref|ZP_07652893.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter
tundripaludum SV96]
gi|307736266|gb|EFO07112.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacter
tundripaludum SV96]
Length = 620
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 15/234 (6%)
Query: 54 GDISKRIALLKLQK-INGELEKIAVQELIVETLKKQEIEK-----------SGITFDSNT 101
D + +L LQK +GE LI+E ++ I+ I
Sbjct: 122 FDDKRYKTMLNLQKMSSGEFVNRIKNALIMEQFQRSIIDSSFATKYDVESFFKIQNQQRD 181
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
V+Y V + AE+ + +Q + ++++ I + + + ++
Sbjct: 182 VDYVTVAVQKLAEQPAEEEIAAYYQQHQDLYQTPEQVSVEYIELSLEDIAKTIAVTDDKL 241
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ +QK + T I +LF+I D + + E + ++
Sbjct: 242 KAFYEEQKDQYTTPERRKISHILFAINDKVDEKTALEKALKAQKELANKDFAAVAAEVSD 301
Query: 222 FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICD 274
K+ + G + F++ + +NP + G I + +
Sbjct: 302 --DKLTAKTGGDLGLFNAGVMEKSFEDAASALKLGEVSNPVKSAFGYHLIKVTE 353
>gi|78486057|ref|YP_391982.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
gi|78364343|gb|ABB42308.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Thiomicrospira
crunogena XCL-2]
Length = 93
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 8/90 (8%)
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFA-------SKIHDVSIGKAQYLLESDLHPQFQN 248
+ + + E L L K + FA S S G + P+F
Sbjct: 4 ATARHILVETEAKALELKKQIEEGADFADVAKANSSCPSSRSGGDLGQFGPGMMVPEFDK 63
Query: 249 L-LKKSQNNTTNPYVTQKGVEYIAICDKRD 277
+ + P TQ G + + D+ +
Sbjct: 64 VCFSADVGSLEGPIKTQFGYHLVEVTDRTE 93
>gi|168335355|ref|ZP_02693450.1| trigger factor [Epulopiscium sp. 'N.t. morphotype B']
Length = 436
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 8/147 (5%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
DI K IA K E+ +Q + + + + Q A+N
Sbjct: 272 DIKKNIAETKASNRKNEITNKVMQ-----KAAENATFELPVEMVDEEIERNVEQFAQNMQ 326
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ +L+ I + FK+ Q++ + + + E ++ K +
Sbjct: 327 KQGINLDQYLEYTDIDRDKFKENFREQAV-TQLSNTLILEEIVKQENLEINDEDFEKELE 385
Query: 175 --VREYLIRTVLFSIPDNKLQNQGFVQ 199
+Y + F N +
Sbjct: 386 RRAVQYRMEIDQFKEKINDNYKESIKN 412
>gi|94990712|ref|YP_598812.1| foldase protein PrsA [Streptococcus pyogenes MGAS10270]
gi|94544220|gb|ABF34268.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS10270]
Length = 351
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
V+ + ++ + + +S ++++ + G+ I+ D + N E+ + A+
Sbjct: 9 ASVVTLASVMALAACQSTNDNTKVISM-KGDTISVSDFYN-------ETKNTEVSQKAML 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L++ + + + G V + + A G S FS+ L + + FK+ +
Sbjct: 61 NLVISRVFE---AQYGDKVSKKEVEKAYHKTAEQYGAS---FSAALAQSSLTPETFKRQI 114
Query: 139 A 139
Sbjct: 115 R 115
>gi|75910578|ref|YP_324874.1| hypothetical protein Ava_4381 [Anabaena variabilis ATCC 29413]
gi|75704303|gb|ABA23979.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 260
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 38/231 (16%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV--QHARNTGLSAEDFSSFL 124
++ LE IA Q +I ET E+ GI + + A L A+D ++L
Sbjct: 21 QMPSILEAIATQRIIAET-----AEQLGIQLSVEELQQSADSMRFANRL-LKADDTWNWL 74
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR--- 181
K + + F++ + + ++ F +E A+K E ++
Sbjct: 75 QKHYLTIDDFEEVAKSNLLHMKLAEHLF---ADKVEPFFYAHKIDYTGAATYEVILDDED 131
Query: 182 ---TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL 238
+ +++ + ++ Q ++ I++ E R + G
Sbjct: 132 LALELFYALQEGEISFQEIARQYIQNPEIRR--------------------AGGYQGIRY 171
Query: 239 ESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYL 288
S+ P+ + + P +T KGV IA+ + + + + +
Sbjct: 172 RSEFRPEIAAAVFAATPPQVLKPIITPKGVHIIAVEEIITPELDESRRIQI 222
>gi|220922111|ref|YP_002497412.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
nodulans ORS 2060]
gi|219946717|gb|ACL57109.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methylobacterium
nodulans ORS 2060]
Length = 277
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 92/294 (31%), Gaps = 36/294 (12%)
Query: 28 VPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKK 87
+ S ++ + ++ +NG I+ IS+ + + A L++
Sbjct: 1 MSACSIRTVPTAPKVPIRVNGVTISRAVISREVQ-NHPAPTPVAAWRAAALALVLREALA 59
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
QE + GI + T + G+ + ++++ + ++
Sbjct: 60 QEARRLGIRAEPATDAEGRRETEEEAGM-----RALVEREAVVPEPTEEECR-----RYY 109
Query: 148 VKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEE 207
+N + +L +LF+ + + +
Sbjct: 110 ERNRARFRAPDL------------------VEASHILFAARKDDATGYELARLNARTVVA 151
Query: 208 SRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQF-QNLLKKSQNNTTN-PYVTQ 264
P +L + S G + P+F LL T++ P T+
Sbjct: 152 MLKADPDTFEELARVHSACPSAELGGSLGQVTTGQTTPEFEAALLGMRPGETSSEPVETR 211
Query: 265 KGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
G I + +R G + +A ++ + + +A+YV +L + A I
Sbjct: 212 YGFHVIRL-GRRIDGCTLPFEAVRQRIAEYLSEAVRRRAQAQYVARLLAQARIE 264
>gi|89901031|ref|YP_523502.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
gi|89345768|gb|ABD69971.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodoferax
ferrireducens T118]
Length = 640
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 15/150 (10%), Positives = 45/150 (30%), Gaps = 6/150 (4%)
Query: 156 YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF-VQKRIKDAEESRLRLPK 214
+M+ + + E +L + + + R + ++ + P
Sbjct: 249 ISEADMKSYYEQNAERLSGKEERRASHILITAAKDAPAADRQKAKARADELLKTVRQSPD 308
Query: 215 DCNKLEKFASKI--HDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIA 271
+ K S+ + G + + F++ + + + + + G I
Sbjct: 309 SFADVAKKNSQDTGSAANGGDLDFFTRGAMVKPFEDAVFAMKKGDISEVVESDFGYHIIK 368
Query: 272 ICDKRDLGGEI--ALKAYLSAQNTPTKIEK 299
+ D + L+A + A + +
Sbjct: 369 LTDIKKPVQRSFEELRAGIEADLKTQQAQA 398
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 50/154 (32%), Gaps = 21/154 (13%)
Query: 15 LLTTYFVLII--FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---------RIALL 63
++ F+LII F + I Y + + + IT G+ R ++
Sbjct: 12 MMAVMFLLIIPSFVLFGIDGYNRSRDAGSVVARVGSHDITQGEWDAVHKSEADRLRASMP 71
Query: 64 KLQKINGELEKI---AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HAR----NT 113
L + + ++ L+ + + Q +K +T + + A +
Sbjct: 72 NLDAKLLDSPQARYATLERLVRDRVLAQAADKFKLTTSDARLARNLHENPSIAALRQPDG 131
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
L + + + QG+ F+ + V
Sbjct: 132 KLDMDRYRQLVGSQGLTPEGFEARVRQDLSVRQV 165
>gi|167465904|ref|ZP_02330993.1| peptidyl-prolyl cis-trans isomerase D, putative [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 353
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 23/205 (11%)
Query: 119 DFSSFLDKQ-GIGDNHFKQY------LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
LD+Q G D K + +F + E + ++ +
Sbjct: 114 QMKQILDQQEGGADKVLKDEKMELKDIENILKQNFYASKEFEKQVTEDETKKAYDENLAQ 173
Query: 172 NITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV- 229
E + +L + D + ++ + A E + +L K A + D
Sbjct: 174 EPNAYEVEDVSHILIGLKDQEGKDLRNKDEAKTRALEVKGKLEKG-EDFAALAKEYSDDP 232
Query: 230 ----SIGKAQYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
GK + + S + P Q +N ++P T G + + +++ +
Sbjct: 233 GSKDKGGKYEKVDYSQMMQFVEPFKQAAWSLEENKISDPVETDYGYHIMKVENRKKQTYD 292
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVK 306
+ Q +K +Y++
Sbjct: 293 -----EVKDQIRSQLSQKKMRDYIE 312
>gi|160898321|ref|YP_001563903.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans
SPH-1]
gi|160363905|gb|ABX35518.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans
SPH-1]
Length = 631
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 51/171 (29%), Gaps = 4/171 (2%)
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
+ ++ + DV + + ++ N+ + E +L + + +
Sbjct: 228 EQAKVEYLLLDVPSIEAGITLSEDDVRSYYNQNAERLAGPEERRASHILINASKDAPAAE 287
Query: 196 GFVQKRIKDAEESRLRL-PKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNL-LK 251
K + + LR PK +L K S S G Y + F++
Sbjct: 288 QEKAKAKAEELLAELRKDPKRFAELAKANSQDGGSAASGGDLGYFGRGAMVKPFEDAAFG 347
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEA 302
+ ++ + G I++ D + + + + +
Sbjct: 348 MKVGDISDVVHSDFGYHIISLVDIKKPKAPSFEQMRPKLEAELKQQQAQRK 398
>gi|331266535|ref|YP_004326165.1| foldase protein PrsA [Streptococcus oralis Uo5]
gi|326683207|emb|CBZ00825.1| foldase protein PrsA [Streptococcus oralis Uo5]
Length = 313
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 24/205 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + SS + ++ G+VIT+ + K N +
Sbjct: 1 MKKKLMAGAITLLSVATLAACSNSSEGKDLISMKGDVITEHQ------FFEEVKNNPTAQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ + I + ++Q G V+ + + G + ++S L + G+
Sbjct: 55 QVLLNMTIQKVFEQQ----YGSEVTDKDVDDAVAEEQKKYG---DSYNSVLQRAGMTPET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + + VK + QK + + + DN+ +
Sbjct: 108 RKAQIRTSKLVELAVKKAAESELT------DEAYQKAFEAYTPDVTAQIIRM---DNEDK 158
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNK 218
+ ++K + + + N
Sbjct: 159 AKEVLEKAKAEGADFAQLAKDNSND 183
>gi|323529999|ref|YP_004232151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
gi|323387001|gb|ADX59091.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Burkholderia sp.
CCGE1001]
Length = 308
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 69/237 (29%), Gaps = 37/237 (15%)
Query: 115 LSAEDFSSFLDKQGIGDNH--FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
++ + + + + + Q I ++ + ++ ++ A ++ +
Sbjct: 71 ITQAQLDDAVRASNV-PDTPALRASIKNQLIARELFRQAAEKQHYESRPQVVAAVEQART 129
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEES--------------------RLRL 212
+ + +R + P + + E +L+
Sbjct: 130 VAMTAAYLRDQVKPAPVTDADVKAKYDAIVATLGEFEYKPSAIAVKDADTAQTVLTQLKK 189
Query: 213 PKDCNKLEKFASKIHDVSIGKAQYLLESDLH-----------PQFQNLLKKSQNNTT-NP 260
D +L K S+ + G A + P + L+K Q + P
Sbjct: 190 GTDFAQLAKQYSQGPGAAQGGALNWISFRTPIQPGNTQNWPQPLAEALVKLPQGGVSSAP 249
Query: 261 YVTQKGVEYIAICDKRDLGGEI--ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + +KR +K L Q ++K A+ V L NA I
Sbjct: 250 VQVGDAFWILRVDEKRATQIPQYDQIKDTLRKQLEQVALQKATAQVVVDLMKNAKIQ 306
>gi|116512580|ref|YP_811487.1| parvulin-like peptidyl-prolyl isomerase [Lactococcus lactis subsp.
cremoris SK11]
gi|116108234|gb|ABJ73374.1| Parvulin-like peptidyl-prolyl isomerase [Lactococcus lactis subsp.
cremoris SK11]
Length = 308
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 32/299 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L V +V + S +S+ T+ G+ I D+ K Q N L+ +
Sbjct: 8 LVMATVFAGAALVTLSGCSSSDSASKDIITMKGDTIRVSDLYKEAKQFPSQPTNTLLQNL 67
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++ + G VN G F+S L +QG+ + F
Sbjct: 68 TFDKIFT--------KDFGKEVTDKDVNKKVKSLKDQYG---SQFASALQQQGLTEASFT 116
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
Y+ Q + + E+E Y + + +
Sbjct: 117 PYMRTQML---------EQAAIDHEIEATQYTDANLKKAWESYHPDVTAYVVSETSKDEA 167
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
K + + K + + + Q + +F ++++ +
Sbjct: 168 TKALDAAKKDDAGKASFEKTNAASKVTFNSTSTTVPTEVQTAAFKLKNGEFSSVIESTSA 227
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHE------AEYVKK 307
+T + + + G ++ K L K + A+Y+KK
Sbjct: 228 STGATS-----YYIVEMVKSSEKGSDMNKYKKELKNVIKAEKEQDTTFVSGVIAKYLKK 281
>gi|116495723|ref|YP_807457.1| peptidylprolyl isomerase [Lactobacillus casei ATCC 334]
gi|116105873|gb|ABJ71015.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei ATCC
334]
Length = 299
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + + ++S + + T +G +T+ K K + +
Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTES------NFYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + + TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLA 139
FK+ L
Sbjct: 111 FKESLR 116
>gi|114327489|ref|YP_744646.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
gi|114315663|gb|ABI61723.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
Length = 656
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 18/168 (10%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVI--TDGDISK 58
M + SL+ + L +++ F + A T+NG I +
Sbjct: 14 MLATFRNSLNAWPVRLLFGLLVLAFVGWGFSDVWTQATGGGALVTVNGSRIEPQAFQATY 73
Query: 59 RIALLKLQKINGE------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
+ L ++++ G + + A+Q+++ ET+ K G+T +
Sbjct: 74 QRELNRVRQQMGGGRQDVPPDIRKMVAQQALQQMVTETVLDDLTRKMGLTTPDADIRQAT 133
Query: 107 VQHAR----NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
F + L+ G+ ++ + YL ++
Sbjct: 134 YAMPAFKNDQGQFDQARFQAVLNSVGLTEDSYVAYLRRTITERQLLDA 181
>gi|94988473|ref|YP_596574.1| phage endopeptidase [Streptococcus phage 9429.2]
gi|94541981|gb|ABF32030.1| phage endopeptidase [Streptococcus phage 9429.2]
Length = 683
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS------NTVNYF---FVQHARNTGL 115
+Q K AVQ +I E+L + I G+TF + + R L
Sbjct: 376 VQNRESRSRKEAVQNMIDESL--ETITDLGMTFQEFLQGIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLA 139
++F ++++G+ N K+ +
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK 457
>gi|37522106|ref|NP_925483.1| hypothetical protein gll2537 [Gloeobacter violaceus PCC 7421]
gi|35213105|dbj|BAC90478.1| gll2537 [Gloeobacter violaceus PCC 7421]
Length = 293
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 16/125 (12%)
Query: 57 SKRIALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
++R LL L G L A E+I E ++ + + ++ F +A +
Sbjct: 15 ARRFRLLALLVACGALFAPGVQAADEVITERVRAIAAQ-MDASASQENLDSLFANYATSF 73
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
G+G +Q ++ +W + K + + E +
Sbjct: 74 K----------SSDGLGYETTRQAVSA--LWEKLAKPTYQTNVTAVVPEKNRYRVNATTR 121
Query: 174 TVREY 178
+Y
Sbjct: 122 LQADY 126
>gi|19746356|ref|NP_607492.1| foldase protein PrsA [Streptococcus pyogenes MGAS8232]
gi|46396947|sp|Q8P0E5|PRSA1_STRP8 RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|19748552|gb|AAL97991.1| putative protease maturation protein [Streptococcus pyogenes
MGAS8232]
Length = 351
Score = 37.7 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
V+ + ++ + + +S ++++ + G+ I+ D + N E+ + A+
Sbjct: 9 ASVVTLASVMALAACQSTNDNTKVISM-KGDTISVSDFYN-------ETKNTEVSQKAML 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L++ + + + G V + + A G S FS+ L + + FK+ +
Sbjct: 61 NLVISRVFE---AQYGDKVSKKEVEKAYHKTAEQYGAS---FSAALAQSSLTPETFKRQI 114
Query: 139 A 139
Sbjct: 115 R 115
>gi|156541530|ref|XP_001603612.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
Length = 130
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 199 QKRIKDAEES-RLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK----- 252
+K+ K E +L+ + N++ S+ S G ++ + FQ
Sbjct: 45 EKQSKILEAMEKLKAGQKFNEVAATYSEDKARSGGDLGWMTRGSMVGPFQEAAFALPISS 104
Query: 253 --SQNNTTNPYVTQKGVEYIAICDKR 276
S T P T+ G I + K+
Sbjct: 105 LGSPVYTDPPVKTKFGYHIIMVEGKK 130
>gi|50914454|ref|YP_060426.1| foldase protein PrsA [Streptococcus pyogenes MGAS10394]
gi|73921822|sp|Q5XBH0|PRSA1_STRP6 RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|50903528|gb|AAT87243.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS10394]
Length = 351
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
V+ + ++ + + +S ++++ + G+ I+ D + N E+ + A+
Sbjct: 9 ASVVTLASVMALAACQSTNDNTKVISM-KGDTISVSDFYN-------ETKNTEVSQKAML 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L++ + + + G V + + A G S FS+ L + + FK+ +
Sbjct: 61 NLVISRVFE---AQYGDKVSKKEVEKAYHKTAEQYGAS---FSAALAQSSLTPETFKRQI 114
Query: 139 A 139
Sbjct: 115 R 115
>gi|210630459|ref|ZP_03296462.1| hypothetical protein COLSTE_00346 [Collinsella stercoris DSM 13279]
gi|210160461|gb|EEA91432.1| hypothetical protein COLSTE_00346 [Collinsella stercoris DSM 13279]
Length = 390
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 49/155 (31%), Gaps = 10/155 (6%)
Query: 87 KQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPD 146
E EK GIT D + + A L DF D+ + ++ K + Q I
Sbjct: 218 LAEAEKQGITVDDDEL-----ATAAEETLGTSDFEVIADQYQVSEDQAKDIVREQVIIQK 272
Query: 147 VVKNDFMLKYGNLEMEIPAN-KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDA 205
++K E PA + KN T EY + + ++ + A
Sbjct: 273 F--YQTVVKDAPKMPEAPAEPENGDKNATSSEYAAYIIDLA--GDEWDEEAGTWASEDGA 328
Query: 206 EESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLES 240
S L + ++ +Y ++
Sbjct: 329 YASALAGETFTADSASYVQAQKAYAVAYQEYATKA 363
>gi|319943847|ref|ZP_08018128.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis
ATCC 51599]
gi|319743080|gb|EFV95486.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Lautropia mirabilis
ATCC 51599]
Length = 649
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 8/173 (4%)
Query: 139 AIQSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNK-LQN 194
++ + + + D + K E E+ A QK +N E +L +P+
Sbjct: 229 SVDISYVALRRTDMLPKDVEPSEKELEAYYQKHRNQFNEAEERQASHILLKVPEGADAAA 288
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDLHPQFQNL-LK 251
+ V+ R + P +L K S+ + G + + F +
Sbjct: 289 KEKVKARAEALLAEAKAHPDKFAELAKKNSEDPGSAEQGGDLGFFERDTMVKPFADAAFG 348
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ T+ T+ G I + + GGE L + E+ Y
Sbjct: 349 LDKPGFTDVVETEYGFHVIQVTGVK-GGGEKPLAEVKPQLVKMWREEEAARRY 400
>gi|309776475|ref|ZP_07671461.1| trigger factor [Erysipelotrichaceae bacterium 3_1_53]
gi|308915866|gb|EFP61620.1| trigger factor [Erysipelotrichaceae bacterium 3_1_53]
Length = 425
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 39/119 (32%), Gaps = 18/119 (15%)
Query: 30 IVSYKSWAMSSRIRTTINGEVITDG---DISKRI-----ALLKLQKINGELEKIAVQELI 81
+ + A + IN E TD D +R+ L + +++ G+ +++ +E+
Sbjct: 293 LTAITDNAEVEIPQVMINEE--TDSLVRDFEQRLQSQGFGLEQFKQVTGQTDEMIREEMG 350
Query: 82 VE-------TLKKQE-IEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN 132
+ L + + I +N A + E + + +
Sbjct: 351 KDAFNKVKVRLVLEAIAAEEKIEISEEDINSELENIANMYNMPIEQVKQLISNDAVSYD 409
>gi|199599019|ref|ZP_03212426.1| peptidylprolyl isomerase [Lactobacillus rhamnosus HN001]
gi|199590055|gb|EDY98154.1| peptidylprolyl isomerase [Lactobacillus rhamnosus HN001]
Length = 300
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 85/263 (32%), Gaps = 34/263 (12%)
Query: 14 KLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
K L F+ + I+ + +S S T +G +T + K K +
Sbjct: 3 KKLRVPFLAAMMASSIMLLSGCQSKQADSTTVATYSGGQVTQ------ASFYKELKQSPT 56
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + LI L + G + + +V+ + + G E+F+SFL + G
Sbjct: 57 TKTVLANLLIYRALN----KAYGKSVSTKSVDNTYNSYKNEYG---ENFTSFLSQNGFSK 109
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ F+Q + + V + K N +++ + ++ +L
Sbjct: 110 SSFRQSIRTNLL--SEVALKKLKKVTNSQLKTAW------KTYQPKVTVQHIL------- 154
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LL 250
++ ++ I D + + K + D + L F++
Sbjct: 155 TSDESTAKQIISDL--AAGKDFTTLAKTYSIDTSTKDKGGKVSFESSSKSLDSTFKDAAY 212
Query: 251 KKSQNNTTN-PYVTQKGVEYIAI 272
K T P G E I +
Sbjct: 213 KLKNGEYTQSPVKVTNGYEVIKM 235
>gi|297582706|ref|YP_003698486.1| hypothetical protein Bsel_0380 [Bacillus selenitireducens MLS10]
gi|297141163|gb|ADH97920.1| hypothetical protein Bsel_0380 [Bacillus selenitireducens MLS10]
Length = 175
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L +F I + S + T++GE IT D R + ++E +
Sbjct: 6 LGLFLIALTGCAANAEDPSYVIATLDGETITMEDYFFRY-----------TDPSMIEEYL 54
Query: 82 VETLKKQEIEKSGITFDSNTVNYF 105
E + +E E GIT + VN
Sbjct: 55 KERVMIKEAEDLGITVSEDEVNAS 78
>gi|120612784|ref|YP_972462.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
gi|120591248|gb|ABM34688.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
Length = 299
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 18/145 (12%), Positives = 45/145 (31%), Gaps = 15/145 (10%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHD--VSIGKA 234
+ +R +L I ++ ++K ++ L+ D +L K S G
Sbjct: 142 QVQVRHIL--IAGKGADSRAQIEKIEQE-----LKGGADFAQLAKERSADKGSAAKGGDL 194
Query: 235 QYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLS 289
+ + P+F + ++ G + + + R + +
Sbjct: 195 GFFEAGKMVPEFDKAAFALTKPGELSGIVESKFGYHILQLEGRHAPRTRSFDEVRSELMQ 254
Query: 290 AQNTPTKIEKHEAEYVKKLRSNAII 314
+ E A+ + ++ A I
Sbjct: 255 EVRANVQQEARVAD-AQAMQKEAKI 278
>gi|328882451|emb|CCA55690.1| Cell division trigger factor [Streptomyces venezuelae ATCC 10712]
Length = 461
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+I + L + + EK + I++ L +E + + + A ++G
Sbjct: 331 EIQGKTEEEFLAETKEQAEKGIKTQFILDELVNKE----KLDVSREELTEHLFRRAASSG 386
Query: 115 LSAEDFSSFLDKQG 128
+S + F+ + + G
Sbjct: 387 MSPDQFAQAVAEGG 400
>gi|166031177|ref|ZP_02234006.1| hypothetical protein DORFOR_00863 [Dorea formicigenerans ATCC
27755]
gi|166029024|gb|EDR47781.1| hypothetical protein DORFOR_00863 [Dorea formicigenerans ATCC
27755]
Length = 353
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 78/254 (30%), Gaps = 26/254 (10%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHARNTGLSAEDFSSFLDKQ 127
++ ++ L L ++ +E ++ + Q + L ++ S +K
Sbjct: 81 SVKSSVLKSLEDMILLEKHMEDYDVSITDEDKAMIKETTQQFLNDNSLDDKNLVSGNEKT 140
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
+A+Q ++ + + E + ++
Sbjct: 141 VNRALTL---MAVQQKMRTAIQAGADTEVSDEEA--------AQKSMDYVFISYQTKDDS 189
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
++K + + AE L + + ++ ++ + ++ +
Sbjct: 190 GNSKDVSDDEKAQLKSQAEAIASGLKEGGD--LNALAEEQGATVQTLTFDKDTTSPDE-- 245
Query: 248 NLLKKS----QNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+L+K + + +T+ T+KG + D + K+ + + + +
Sbjct: 246 DLIKAADALGEGESTDVIETEKGCYVAKVTSLLDRTATDSKKSQIVQERQTKLYDDTVKK 305
Query: 304 YVKKLRSNAIIHYY 317
+ R A I +
Sbjct: 306 W----RKKADIKVH 315
>gi|328771505|gb|EGF81545.1| hypothetical protein BATDEDRAFT_10474 [Batrachochytrium
dendrobatidis JAM81]
Length = 160
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 12/129 (9%)
Query: 154 LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ---GFVQKRIKDA----E 206
+K L++ + + + +L ++ + + + ++A +
Sbjct: 28 VKIIPLDLSLVPVGDDEASTAQNQIRASHLLVKHSGSRRPSSWKEANISRSKEEAMQIIQ 87
Query: 207 ESRLRLPKDCNKLEKFASKIHDVS----IGKAQYLLESDLHPQF-QNLLKKSQNNTTNPY 261
R ++ L A D S G + F Q +NP
Sbjct: 88 NFRAKIESGEVDLSTLAKTESDCSSASRGGDLGKFGYGQMQASFEQAAFALKVGELSNPV 147
Query: 262 VTQKGVEYI 270
V+ G+ I
Sbjct: 148 VSDSGIHLI 156
>gi|15675314|ref|NP_269488.1| foldase protein PrsA [Streptococcus pyogenes M1 GAS]
gi|21910595|ref|NP_664863.1| foldase protein PrsA [Streptococcus pyogenes MGAS315]
gi|28895716|ref|NP_802066.1| foldase protein PrsA [Streptococcus pyogenes SSI-1]
gi|71903789|ref|YP_280592.1| foldase protein PrsA [Streptococcus pyogenes MGAS6180]
gi|71910946|ref|YP_282496.1| foldase protein PrsA [Streptococcus pyogenes MGAS5005]
gi|94988810|ref|YP_596911.1| foldase protein PrsA [Streptococcus pyogenes MGAS9429]
gi|94992696|ref|YP_600795.1| foldase protein PrsA [Streptococcus pyogenes MGAS2096]
gi|94994636|ref|YP_602734.1| foldase protein PrsA [Streptococcus pyogenes MGAS10750]
gi|139473576|ref|YP_001128292.1| foldase protein PrsA [Streptococcus pyogenes str. Manfredo]
gi|209559624|ref|YP_002286096.1| foldase protein PrsA [Streptococcus pyogenes NZ131]
gi|306827096|ref|ZP_07460393.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes ATCC
10782]
gi|46396700|sp|P60751|PRSA1_STRP3 RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|46396705|sp|P60811|PRSA1_STRP1 RecName: Full=Foldase protein prsA 1; Flags: Precursor
gi|13622493|gb|AAK34209.1| putative protease maturation protein [Streptococcus pyogenes M1
GAS]
gi|21904796|gb|AAM79666.1| putative protease maturation protein [Streptococcus pyogenes
MGAS315]
gi|28810965|dbj|BAC63899.1| putative protease maturation protein [Streptococcus pyogenes SSI-1]
gi|71802884|gb|AAX72237.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS6180]
gi|71853728|gb|AAZ51751.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS5005]
gi|94542318|gb|ABF32367.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS9429]
gi|94546204|gb|ABF36251.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS2096]
gi|94548144|gb|ABF38190.1| Peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes
MGAS10750]
gi|134271823|emb|CAM30057.1| foldase protein PrsA 1 precursor [Streptococcus pyogenes str.
Manfredo]
gi|209540825|gb|ACI61401.1| Foldase protein prsA 1 precursor [Streptococcus pyogenes NZ131]
gi|304430730|gb|EFM33742.1| peptidyl-prolyl cis-trans isomerase [Streptococcus pyogenes ATCC
10782]
Length = 351
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
V+ + ++ + + +S ++++ + G+ I+ D + N E+ + A+
Sbjct: 9 ASVVTLASVMALAACQSTNDNTKVISM-KGDTISVSDFYN-------ETKNTEVSQKAML 60
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL 138
L++ + + + G V + + A G S FS+ L + + FK+ +
Sbjct: 61 NLVISRVFE---AQYGDKVSKKEVEKAYHKTAEQYGAS---FSAALAQSSLTPETFKRQI 114
Query: 139 A 139
Sbjct: 115 R 115
>gi|325920988|ref|ZP_08182874.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC
19865]
gi|325548522|gb|EGD19490.1| parvulin-like peptidyl-prolyl isomerase [Xanthomonas gardneri ATCC
19865]
Length = 656
Score = 37.3 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKGAGGDLGWVEKGTMVKPFEDALFAMKAGDVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + Q +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDQLAAEQLKADADK 414
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 8/131 (6%)
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSSFLDKQGIGD 131
+ +L+ E + + E +GI TV + + S + + + L + G
Sbjct: 107 QVLDQLVDEQVVRLGAEDAGIVIGDATVRDYITGIQAFQVDGKFSPDQYRAALAQ-GTPP 165
Query: 132 NHFKQY--LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPD 189
Q+ L S+ V+ + E + M R+ + + D
Sbjct: 166 RTPAQFDALVRDSLQQSVIPQAIAESGFATKAEFERLLKLM--GETRDVELAMLPPPAAD 223
Query: 190 NKLQNQGFVQK 200
+ +++
Sbjct: 224 TAPVSDAQIKQ 234
>gi|294786963|ref|ZP_06752217.1| trigger factor [Parascardovia denticolens F0305]
gi|294485796|gb|EFG33430.1| trigger factor [Parascardovia denticolens F0305]
Length = 459
Score = 37.3 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 24/64 (37%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ E + A +EL + + E + V F A+ G+ +F + +
Sbjct: 329 TKEQEKEAKDSAEKELRDQIVLDTVAESLNVQVTQADVTNFLASIAQQYGMDPTNFITSI 388
Query: 125 DKQG 128
+ G
Sbjct: 389 VQNG 392
>gi|116326589|ref|YP_796510.1| peptidylprolyl isomerase [Lactococcus lactis subsp. cremoris SK11]
gi|122064922|sp|Q02VE3|PRSA_LACLS RecName: Full=Foldase protein prsA; AltName: Full=Protease
maturation protein prtM; Flags: Precursor
gi|47198|emb|CAA32349.1| unnamed protein product [Lactococcus lactis subsp. cremoris]
gi|76574943|gb|ABA47412.1| peptidyl-prolyl isomerase, maturation protein [Lactococcus lactis]
gi|116108957|gb|ABJ74079.1| Parvulin-like peptidyl-prolyl isomerase [Lactococcus lactis subsp.
cremoris SK11]
Length = 299
Score = 37.3 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 91/270 (33%), Gaps = 50/270 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + + ++S + + T +G +T+ + K K + +
Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTES------SFYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + + TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK+ L + +F+ + +K+K ++ + Q
Sbjct: 111 FKESL----------RTNFLSEV---------ALKKLKKVSESQ-------LKAAWKTYQ 144
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLESDLHPQ---- 245
+ VQ + E++ ++ D + FA D + + +L+ +
Sbjct: 145 PKVTVQHILTSDEDTAKQVISDLAAGKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDA 204
Query: 246 -FQN-LLKKSQNNTTN-PYVTQKGVEYIAI 272
F++ K + T P G E I +
Sbjct: 205 TFKDAAYKLKNGDYTQTPVKVTDGYEVIKM 234
>gi|315226602|ref|ZP_07868390.1| trigger factor [Parascardovia denticolens DSM 10105]
gi|315120734|gb|EFT83866.1| trigger factor [Parascardovia denticolens DSM 10105]
Length = 455
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 24/64 (37%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
++ E + A +EL + + E + V F A+ G+ +F + +
Sbjct: 325 TKEQEKEAKDSAEKELRDQIVLDTVAESLNVQVTQADVTNFLASIAQQYGMDPTNFITSI 384
Query: 125 DKQG 128
+ G
Sbjct: 385 VQNG 388
>gi|154503863|ref|ZP_02040923.1| hypothetical protein RUMGNA_01689 [Ruminococcus gnavus ATCC 29149]
gi|153795462|gb|EDN77882.1| hypothetical protein RUMGNA_01689 [Ruminococcus gnavus ATCC 29149]
Length = 350
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 72/246 (29%), Gaps = 23/246 (9%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNT---VNYFFVQHARNTGLSAEDFSSFLDKQ 127
++ ++ L L KQ + + ++ + + L ++
Sbjct: 88 NMKDSILESLENMYLVKQHASEYKVELTDEEKKKIDKAAEEFVEDNTLEDKEV------- 140
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
+ +K+Y+ + + ++ + K I EY ++
Sbjct: 141 ---VSGYKKYVKEYLELATIQQKMDAPMKEGVDENVSDEDAAQKKI---EY-VQFSYTKK 193
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLL----ESDLH 243
D+ Q ++ + E+++ L +K + + + Q S L+
Sbjct: 194 DDSGQSVQMTDDEKKAEKEKAQTFLDTVSADPDKDMNAAAASAEKEVQTATFDSESSTLN 253
Query: 244 PQFQNLLKKSQ--NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHE 301
+ + T+ T G+ + K D K + + + E
Sbjct: 254 ADLLKAADALENVGDVTSLIETDDGIYVAKLTSKLDREATDQKKKEIVEERKQKQYEDQV 313
Query: 302 AEYVKK 307
+ K+
Sbjct: 314 ETWRKE 319
>gi|163787467|ref|ZP_02181914.1| peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium
ALC-1]
gi|159877355|gb|EDP71412.1| peptidyl-prolyl cis-trans isomerase [Flavobacteriales bacterium
ALC-1]
Length = 718
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 11 DFIKLLTTYFVLIIFCIVPIV--SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKI 68
I +L L F I + S S + T+NG+ I D +++ + +
Sbjct: 11 SLILILVIALALFSFVIGDLFKNSDALTGESQDVIATVNGKDINRLDFQQKVKSYQERVG 70
Query: 69 NGELEKIAVQELIVETLKKQ----EIEKSGITFDSNTV 102
A+ + + L+K E E G++ + + +
Sbjct: 71 GRVSSTQAMNTIYNQELRKIVMKSEFEALGLSVEKDEM 108
>gi|317419006|emb|CBN81044.1| Transcriptional adapter 3-like [Dicentrarchus labrax]
Length = 431
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARN 112
++ KR A LK + K + L E ++KQE+ + + N V F + AR
Sbjct: 344 ELQKRQAELKALSAHNRARKQELLRLAKEEMRKQELRQR-VRVSDNEVMEGFRRIMAARQ 402
Query: 113 TGLSA 117
+
Sbjct: 403 KKRTP 407
>gi|282852135|ref|ZP_06261492.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus gasseri 224-1]
gi|282556699|gb|EFB62304.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus gasseri 224-1]
Length = 652
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 14/193 (7%)
Query: 52 TDGDISKRIALLKLQ-KINGELEKIAVQELIVETLKKQEI----EKSGITFDSNTVNYFF 106
+ D+ K +L+ I G+ A I L E + + + + +N
Sbjct: 405 MEFDLKKLAPTYRLRIGIPGQSNAFA----IAHQLGMNEAVVDKARDLMNDEDSDINKMI 460
Query: 107 VQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN 166
+ T +AE L + K+ L W + + K E+ A
Sbjct: 461 ERLTEQTK-AAEQLHETLKQNVDQSITLKRQLQNGLDWYNQQVQKQLEKSQEKADEMLAK 519
Query: 167 KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKI 226
K+K + + + +++ ++ + + R NK+ + K
Sbjct: 520 KRKQAEKIINDLEEQR----RAGGQVRTNKVIEAKGALNKLERENQNLANNKVLQREKKR 575
Query: 227 HDVSIGKAQYLLE 239
HDVS+G +L
Sbjct: 576 HDVSVGDNVKVLS 588
>gi|225378751|ref|ZP_03755972.1| hypothetical protein ROSEINA2194_04421 [Roseburia inulinivorans DSM
16841]
gi|225209410|gb|EEG91764.1| hypothetical protein ROSEINA2194_04421 [Roseburia inulinivorans DSM
16841]
Length = 447
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 57 SKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+ + + + + ++ A + + +Q ++ I + +N + A G
Sbjct: 331 EQYMQFSGMTIDGLKEQVRPEAETRIKSSLVLEQIAKEENIEVSEDEINAEVEKMAAQYG 390
Query: 115 LSAEDFSSFLDKQ 127
+ A+ +L +
Sbjct: 391 MEADKLKEYLGEA 403
>gi|222110395|ref|YP_002552659.1| ppic-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus
TPSY]
gi|221729839|gb|ACM32659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax ebreus
TPSY]
Length = 640
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 40/130 (30%), Gaps = 4/130 (3%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASKIHDV--SIGK 233
E +L + + + K + +++R P ++ K S+ S G
Sbjct: 269 ERRASHILINASKDAPADARTQAKAKAEELLAQVRKAPGSFAEIAKKESQDPGSAPSGGD 328
Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
+ + F++ + + ++ T G I + D + + S +
Sbjct: 329 LGFFGRGAMVKPFEDAVFSMKKGEISDVVETDFGFHIILLSDIKTPRQPSFEELRPSLEA 388
Query: 293 TPTKIEKHEA 302
+ +
Sbjct: 389 ELKQQQAQRK 398
Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 19/165 (11%), Positives = 55/165 (33%), Gaps = 19/165 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING 70
I + + ++I I+ + ++ S + ++G+ IT D D + R+ +++ +
Sbjct: 11 IVMFLLFLLIIPSFILVGIDSNYFSGGSPVVARVDGKDITQADWDNAHRMESDRIRAQSP 70
Query: 71 ----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVN---YFFVQHAR----NT 113
+ ++ L+ + + + + + + Q A +
Sbjct: 71 GIDAKLLDSPQARYATLERLVRDRVLQVAAQDMHMLTSDARLARELQSIPQIAALKRADG 130
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
L AE + + QG+ + + V+ +
Sbjct: 131 TLDAEAYRALAGAQGLTPEGLEARIRQDLSVNQVMGGVMGSAFSG 175
>gi|91776379|ref|YP_546135.1| hypothetical protein Mfla_2027 [Methylobacillus flagellatus KT]
gi|91710366|gb|ABE50294.1| conserved hypothetical protein [Methylobacillus flagellatus KT]
Length = 314
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCI--VPIVSYKSWAMSSRIRTTINGEVITDGDISK 58
M ++ +++ + K+ V ++ I + +S+ +NG+ IT +++
Sbjct: 1 MNTEYGSTIMQWSKMTKGALVALMISIGLSGCGDKSNETKASQSLARVNGKEITVHQLNE 60
Query: 59 RIALLKLQKINGELE-KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
+A +Q E K +Q LI L +Q K+ + D N V +
Sbjct: 61 ELARANVQPAQKEAATKQILQSLIDRQLLEQAALKAKVDRDPN-VMQAIERAKSQM 115
>gi|297519828|ref|ZP_06938214.1| peptidyl-prolyl cis-trans isomerase (rotamase D) [Escherichia coli
OP50]
Length = 141
Score = 37.3 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 16/80 (20%)
Query: 43 RTTINGEVITDGDISK--RIALLKLQKINGE--------------LEKIAVQELIVETLK 86
+N + I+ G ++Q+ G+ L + + LI E L
Sbjct: 42 AAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALL 101
Query: 87 KQEIEKSGITFDSNTVNYFF 106
Q + + V
Sbjct: 102 DQYARELKLGISDEQVKQAI 121
>gi|156541340|ref|XP_001599709.1| PREDICTED: similar to ENSANGP00000014025 [Nasonia vitripennis]
Length = 162
Score = 37.3 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 30/116 (25%), Gaps = 12/116 (10%)
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQ---NQGFVQKRIKDAEES----RLRLPKDCNKLE 220
K E +L ++ + + + +A E R ++
Sbjct: 44 GNGKTEGPDEVQCSHILVKHSGSRRPSSWRESTITRSKAEALELVKEYREQIVSGEASFG 103
Query: 221 KFASKIHDVSI----GKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYIA 271
ASK D S G + F+ + P T GV I
Sbjct: 104 SLASKYSDCSSAKRNGDLGPFGRGAMQKPFEEAAFALKVGQISQPIDTDSGVHIIQ 159
>gi|121594957|ref|YP_986853.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
gi|120607037|gb|ABM42777.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax sp. JS42]
Length = 640
Score = 37.3 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 40/130 (30%), Gaps = 4/130 (3%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR-LPKDCNKLEKFASKIHDV--SIGK 233
E +L + + + K + +++R P ++ K S+ S G
Sbjct: 269 ERRASHILINASKDAPADARTQAKAKAEELLAQVRKAPGSFAEIAKKESQDPGSAPSGGD 328
Query: 234 AQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQN 292
+ + F++ + + ++ T G I + D + + S +
Sbjct: 329 LGFFGRGAMVKPFEDAVFSMKKGEISDVVETDFGFHIILLSDIKTPRQPSFEELRPSLEA 388
Query: 293 TPTKIEKHEA 302
+ +
Sbjct: 389 ELKQQQAQRK 398
Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 19/165 (11%), Positives = 55/165 (33%), Gaps = 19/165 (11%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT--DGDISKRIALLKLQKING 70
I + + ++I I+ + ++ S + ++G+ IT D D + R+ +++ +
Sbjct: 11 IVMFLLFLLIIPSFILVGIDSNYFSGGSPVVARVDGKDITQADWDNAHRMESDRIRAQSP 70
Query: 71 ----------ELEKIAVQELIVETLKKQEIEKSGITFDSNTVN---YFFVQHAR----NT 113
+ ++ L+ + + + + + + Q A +
Sbjct: 71 GIDAKLLDSPQARYATLERLVRDRVLQVAAQDMHMLTSDARLARELQSIPQIAALKRADG 130
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
L AE + + QG+ + + V+ +
Sbjct: 131 TLDAEAYRALAGAQGLTPEGLEARIRQDLSVNQVMGGVMGSAFSG 175
>gi|328676007|gb|AEB28682.1| Peptidyl-prolyl cis-trans isomerase ppiD [Francisella cf. novicida
3523]
Length = 477
Score = 37.3 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKR 59
+ S +D +K T+ V+I + ++S + + S + I+ +
Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60
Query: 60 IALLKLQKINGELEKIA-VQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTG 114
Q +++K A + ++I + L + ++ I + ++
Sbjct: 61 A-----QSATTDIQKRAILSQMIDQYLILADAQRHNIVVSKLALQSAIFTNPMFFDKDGK 115
Query: 115 LSAEDFSSFLDKQG 128
SA+ + G
Sbjct: 116 FSADKLKQVVAYLG 129
>gi|322381189|ref|ZP_08055192.1| molecular chaperone lipoprotein-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154765|gb|EFX47036.1| molecular chaperone lipoprotein-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 351
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 23/205 (11%)
Query: 119 DFSSFLDKQ-GIGDNHFKQY------LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMK 171
LD+Q G D K + +F + E + ++ +
Sbjct: 112 QMKQILDQQEGGADKVLKDEKMELKDIENILKQNFYASKEFEKQVTEDETKKAYDENLAQ 171
Query: 172 NITVREY-LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV- 229
E + +L + D + ++ + A E + +L K A + D
Sbjct: 172 EPNAYEVEDVSHILIGLKDQEGKDLRNKDEAKTRALEVKGKLEKG-EDFAALAKEYSDDP 230
Query: 230 ----SIGKAQYLLESDL----HPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGE 281
GK + + S + P Q +N ++P T G + + +++ +
Sbjct: 231 GSKDKGGKYEKVDYSQMMQFVEPFKQAAWSLEENKISDPVETDYGYHIMKVENRKKQTYD 290
Query: 282 IALKAYLSAQNTPTKIEKHEAEYVK 306
+ Q +K +Y++
Sbjct: 291 -----EVKDQIRSQLSQKKMRDYIE 310
>gi|293365248|ref|ZP_06611965.1| peptidyl-prolyl cis-trans isomerase [Streptococcus oralis ATCC
35037]
gi|307703788|ref|ZP_07640729.1| foldase protein prsA [Streptococcus oralis ATCC 35037]
gi|315613010|ref|ZP_07887921.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sanguinis ATCC
49296]
gi|291316698|gb|EFE57134.1| peptidyl-prolyl cis-trans isomerase [Streptococcus oralis ATCC
35037]
gi|307622623|gb|EFO01619.1| foldase protein prsA [Streptococcus oralis ATCC 35037]
gi|315315120|gb|EFU63161.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sanguinis ATCC
49296]
Length = 313
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 24/205 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + SS + ++ G+VIT+ + K N +
Sbjct: 1 MKKKLMAGAITLLSVATLAACSNSSEGKDLISMKGDVITEHQ------FFEEVKNNPTAQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ + I + ++Q G V+ + + G + ++S L + G+
Sbjct: 55 QVLLNMTIQKVFEQQ----YGSEVTDKDVDDAVAEEQKKYG---DSYNSVLQRAGMTPET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + + VK + QK + + + DN+ +
Sbjct: 108 RKAQIRTSKLVELAVKKAAESELT------DEAYQKAFESYTPDVTAQIIRL---DNEDK 158
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNK 218
+ ++K + + + N
Sbjct: 159 AKEVLEKAKAEGADFAQLAKDNSND 183
>gi|165976428|ref|YP_001652021.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165876529|gb|ABY69577.1| peptidyl-prolyl cis-trans isomerase D [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 625
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 19/155 (12%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVIT-----------DGDISKRIA-- 61
+ F L+ V +NG IT ++ ++
Sbjct: 13 VFKIIFALVSLSFVITGIGTGLVGGGTAAVKVNGTEITQQAFNAAKNRQQSVLNAQMGER 72
Query: 62 ---LLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGL 115
LL + + + + L+ E L +Q ++ + + + V ++
Sbjct: 73 FWDLLDTPEYAKQFNQSVLNGLVDEELLRQYAKELKLGISAEQIKSEIVNSPVFQQDGKF 132
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
S + + L G+ + + + ++ + +
Sbjct: 133 SNDLYQQTLRSNGLSADGYAAIVNEGMLFSQIQEG 167
>gi|144898531|emb|CAM75395.1| peptidyl-prolyl cis-trans isomerse D [Magnetospirillum
gryphiswaldense MSR-1]
Length = 645
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 71/299 (23%), Gaps = 72/299 (24%)
Query: 77 VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR----NTGL---SAEDFSSFLDKQGI 129
+ ++ TL + + + V + A L + L + G
Sbjct: 112 IDSIVTRTLVDEAARGLSLATSDDEV---IAKVAAEPSFRNQLGQFDRDLLRQALSRAGW 168
Query: 130 GDNHFKQY-----LAIQSI-------------------WPDVVKNDFMLKYGNLEMEIPA 165
+ F + L Q W + + M PA
Sbjct: 169 SEQEFMRQEKDNILRTQLAESLSGGLTAPQALTEPLIRWKRETRQAETVSIKASSMPQPA 228
Query: 166 N----------KQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
K + E+ T L + + + + +A ++R
Sbjct: 229 APDAATLEQYYKANANSFMAPEFRAITALLLRTTDAGRGLTVTDEMLTEAYKAREDEFHS 288
Query: 216 -------------------------CNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NL 249
K K +K V++ + + + DL + +
Sbjct: 289 PERRTVSQIVLADDASADKAAEMVKAGKDIKVIAKDLGVNVIELGLVEKGDLPDELAGPV 348
Query: 250 LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
Q T P + G + + A + + + + + +L
Sbjct: 349 FDVGQGALTQPVKSALGWHVAKVTAI--TAEKTRSLAEVREMLAADILREKSMDRITEL 405
>gi|15835249|ref|NP_297008.1| hypothetical protein TC0634 [Chlamydia muridarum Nigg]
gi|270285421|ref|ZP_06194815.1| hypothetical protein CmurN_03208 [Chlamydia muridarum Nigg]
gi|270289435|ref|ZP_06195737.1| hypothetical protein CmurW_03303 [Chlamydia muridarum Weiss]
gi|301336818|ref|ZP_07225020.1| hypothetical protein CmurM_03265 [Chlamydia muridarum MopnTet14]
gi|14195471|sp|Q9PK39|Y634_CHLMU RecName: Full=Uncharacterized protein TC_0634; Flags: Precursor
gi|7190673|gb|AAF39463.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 353
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 71/228 (31%), Gaps = 27/228 (11%)
Query: 4 KVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTIN--------GEVITDGD 55
+V ++ L T F I F S + N V+T D
Sbjct: 2 RVVKRIAVACYLGITIFSGIAFGYEGSFPSSSLEQNPSGVAIHNRVLFKIDEDTVVTTLD 61
Query: 56 ISKRIALLKLQKING-----ELEKI--------AVQELIVETLKKQEIEKSGITFDSNTV 102
+ ++ +L ++ +I E L + ++ I D +V
Sbjct: 62 VIHKLNILFYSTCPQLVDSVSARSQYYSAMWPVVLESVINEFLMAADAKEKKIFIDPTSV 121
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
N LS F+ F D G N + L Q I +V++ MLK +
Sbjct: 122 NQEIEAMFGR-DLSP--FAKFFDMTPGDIFNVVHRVLVAQRIEGMMVRSRVMLKVTPGMV 178
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQN--QGFVQKRIKDAEE 207
K V ++ R + L N G VQ+R+ + +
Sbjct: 179 RDRYQKLVEDASQVSQWTYRVLTIKAGSELLANKIAGKVQERLNEGDS 226
>gi|299069905|emb|CBJ41188.1| putative isomerase [Ralstonia solanacearum CMR15]
Length = 270
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 38/309 (12%), Positives = 84/309 (27%), Gaps = 56/309 (18%)
Query: 20 FVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQE 79
V + + ++ + + +NG IT + IA Q ++ + Q+
Sbjct: 1 MVALALAAFTTLPAQADTLPPGVIAIVNGTRITQEQLDHAIAQSGAQANP-QVAQALKQQ 59
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
LI L +Q+ K N + + + I K +
Sbjct: 60 LIARELFRQQAAK----------NPAYDKLPA-----VKQAMQEAHDAVITQAWLKDNIK 104
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
I + VK + + ++ +EY R + Q ++
Sbjct: 105 PAPITEEQVKARYDA--------------IVASLGDKEYKARVIQLGDDVTAAQVLAQLK 150
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHD-VSIGKAQYLL---------ESDLHPQFQNL 249
+ D KL + S + V G ++ +L
Sbjct: 151 Q------------GGDFAKLAQQYSTAPNKVRGGDMDWVSFKVPVEEGKTQNLPLPLARE 198
Query: 250 LKKSQNNTTNPYVTQKGV--EYIAICDKR--DLGGEIALKAYLSAQNTPTKIEKHEAEYV 305
+ + + G + + R + G ++ + ++E+ V
Sbjct: 199 IATLAVGAASTAPVEAGSQRYIVKVEAARPTQVPGYETVRPAIRQALETAELERVTVRVV 258
Query: 306 KKLRSNAII 314
L A +
Sbjct: 259 GDLLKQAKV 267
>gi|239630128|ref|ZP_04673159.1| ase protein prsA [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301067278|ref|YP_003789301.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei str.
Zhang]
gi|239527740|gb|EEQ66741.1| ase protein prsA [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300439685|gb|ADK19451.1| Parvulin-like peptidyl-prolyl isomerase [Lactobacillus casei str.
Zhang]
Length = 299
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 88/270 (32%), Gaps = 50/270 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + ++S + + T +G +T+ + K K + +
Sbjct: 4 KMRLKVLLASTATAFLLLSGCQSNQADQTVATYSGGKVTES------SFYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + + TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK+ L + +F+ + +K+K ++ + Q
Sbjct: 111 FKESL----------RTNFLSEV---------ALKKLKKVSESQ-------LKAAWKTYQ 144
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLE-----SDLHP 244
+ VQ + E++ ++ D + FA+ D + + L
Sbjct: 145 PKVTVQHILTSDEDTAKQVISDLAAGKDFATLAKTDSIDTATKDNGGKISFESNNKTLDA 204
Query: 245 QFQN-LLKKSQNNTTN-PYVTQKGVEYIAI 272
F++ K + T P G E I +
Sbjct: 205 TFKDAAYKLKNGDYTQTPVKVTDGYEVIKM 234
>gi|71903643|ref|YP_280446.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|71802738|gb|AAX72091.1| phage protein [Streptococcus pyogenes MGAS6180]
Length = 684
Score = 37.3 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDS------NTVNYF---FVQHARNTGL 115
+Q K AVQ +I E+L + I G+TF + + R L
Sbjct: 376 VQNRESRSRKEAVQNMIDESL--ETITDLGMTFQEFLQGIEKRIETGKKEMEDNWRKVNL 433
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLA 139
++F ++++G+ N K+ +
Sbjct: 434 EFDNFKKKVEQEGLQFNTLKEQIK 457
>gi|227533717|ref|ZP_03963766.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|400854|sp|Q02473|PRSA_LACPA RecName: Full=Foldase protein prsA; AltName: Full=Protease
maturation protein prtM; Flags: Precursor
gi|149581|gb|AAA25247.1| maturation protein [Lactobacillus paracasei]
gi|227188701|gb|EEI68768.1| peptidylprolyl isomerase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 299
Score = 37.3 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + + ++S + + T +G +T+ K K + +
Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQADQKVATYSGGKVTES------NFYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + + TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLA 139
FK+ L
Sbjct: 111 FKESLR 116
>gi|285016918|ref|YP_003374629.1| ppic-type peptidyl-prolyl cis-trans isomerase; protein [Xanthomonas
albilineans GPE PC73]
gi|283472136|emb|CBA14643.1| hypothetical ppic-type peptidyl-prolyl cis-trans isomerase; protein
[Xanthomonas albilineans]
Length = 290
Score = 37.3 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 13/144 (9%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFV---QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
EY +R + ++ G + ++ AE + +L + + D +
Sbjct: 137 TEYHLRHLFVALHPQGGPRGGQSLTEAQALQRAEALKRQLDGGADFATLAMHESDDGATA 196
Query: 233 KAQYLLESDLHPQFQ-----NLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
L + + + N + P G I + K D E
Sbjct: 197 AEGGQLSPTFGRYLADAFVAPIHQLAVNQVSAPVRGPDGYHLIYLDAKTDARFEAV---- 252
Query: 288 LSAQNTPTKIEKHEAEYVKKLRSN 311
Q E+ A+ +++LR
Sbjct: 253 -RGQIELQLREQAAADAMQRLRQA 275
>gi|306825386|ref|ZP_07458726.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
gi|304432324|gb|EFM35300.1| peptidyl-prolyl cis-trans isomerase [Streptococcus sp. oral taxon
071 str. 73H25AP]
Length = 339
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 24/205 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + SS + ++ G+VIT+ + K N +
Sbjct: 27 MKKKIMAGAITLLSVATLAACSNSSEGKDLISMKGDVITEHQ------FFEEVKNNPTAQ 80
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ + I + ++Q G V+ + + G + ++S L + G+
Sbjct: 81 QVLLNMTIQKVFEQQ----YGSEVTDKDVDDAVAEEQKKYG---DSYNSVLQRAGMTPET 133
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + + VK + QK + + + DN+ +
Sbjct: 134 RKAQIRTSKLVELAVKKAAESELT------DEAYQKAFESYTPDVTAQIIRM---DNEDK 184
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNK 218
+ ++K + + + N
Sbjct: 185 AKEVLEKAKAEGADFAQLAKDNSND 209
>gi|270292892|ref|ZP_06199103.1| foldase protein PrsA [Streptococcus sp. M143]
gi|270278871|gb|EFA24717.1| foldase protein PrsA [Streptococcus sp. M143]
Length = 313
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 69/205 (33%), Gaps = 24/205 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + SS ++ G+V+T+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKSSEGADLISMKGDVVTEHQFYEQVK----------NN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G V+ + + G + ++S L + G+
Sbjct: 51 PTAQQVLLNMTIQKVFEKQYGSEVTDKEVDDAVAEEQKKYG---DSYNSVLQRAGMTPET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + +V+ N + QK + + + DN+ +
Sbjct: 108 RKAQIRT----SKLVELAVKKAAENELTDE--AYQKAFEAYTPDVTAQIIRM---DNEDK 158
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNK 218
+ ++K + + + N
Sbjct: 159 AKEVLEKAKAEGADFAQLAKDNSND 183
>gi|322374457|ref|ZP_08048971.1| foldase protein PrsA [Streptococcus sp. C300]
gi|321279957|gb|EFX56996.1| foldase protein PrsA [Streptococcus sp. C300]
Length = 313
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 24/205 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + SS + ++ G+VIT+ + K N +
Sbjct: 1 MKKKLMAGAITLLSVATLAACSNSSEGKDLISMKGDVITEHQ------FFEEVKNNPTAQ 54
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
++ + I + ++Q G V+ + + G + ++S L + G+
Sbjct: 55 QVLLNMTIQKVFEQQ----YGSEVTDKDVDDAVAEEQKKYG---DSYNSVLQRAGMTPET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + + VK + QK + + + DN+ +
Sbjct: 108 RKAQIRTSKLVELAVKKAAESELT------DEAYQKAFESYTPDVTAQIIRL---DNEDK 158
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNK 218
+ ++K + + + N
Sbjct: 159 AKEVLEKAKAEGADFAQLAKDNSND 183
>gi|229367552|gb|ACQ58756.1| Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Anoplopoma
fimbria]
Length = 156
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKK 252
++ K EE + K + +F+ + G + + F++
Sbjct: 75 KDEALELIQKYIEEIKSGEEKFESLASQFSDCSSAKNGGDLGQFGKGQMQKPFEDASFAL 134
Query: 253 SQNNTTNPYVTQKGVEYI 270
+ + P T+ GV I
Sbjct: 135 KVGDMSGPVFTESGVHII 152
>gi|255505867|ref|ZP_05348575.3| trigger factor [Bryantella formatexigens DSM 14469]
gi|255265473|gb|EET58678.1| trigger factor [Bryantella formatexigens DSM 14469]
Length = 437
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFL 124
L+++ E EK L++E + + GI + V + A + AE+ + L
Sbjct: 354 LEQMRPEAEKRIKNTLVLEAI----AKAEGIEAGDDKVEEEIKKMAEMYKMEAENVKNML 409
Query: 125 DKQGIGDNHFKQYLAIQSIWPDVVK 149
+QG+ + + + V
Sbjct: 410 GEQGV------EQIRHDLAIQEAVN 428
>gi|160896759|ref|YP_001562341.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans
SPH-1]
gi|160362343|gb|ABX33956.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Delftia acidovorans
SPH-1]
Length = 311
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 62/218 (28%), Gaps = 12/218 (5%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+G + V +L + + ++G+ V+ ++ + + L
Sbjct: 44 ASGAGVSVTVDDLQADAQRIPPEVRAGLLARPQNVSQIADNLLVRRVMAQKAQAQGLGNN 103
Query: 128 GIGDNHF---KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRT 182
+ + + W + D E + + + +R
Sbjct: 104 AVAQAALNVARDKILSD-AWLAKIDADNTPSAAAAEGQARNIYKAHPERFAVEEQVHVRH 162
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDL 242
+L + + K E R E+ A K G + + +
Sbjct: 163 ILI-----AGTDDAARAQAEKLVAELRGGADFAALAKERSADKGSAARGGDLGFFGKDKM 217
Query: 243 HPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLG 279
P+F Q +N + ++ G + + D++ G
Sbjct: 218 VPEFEQAAFALKKNEISGAVQSKFGFHVLQLLDRKPAG 255
>gi|297181079|gb|ADI17278.1| parvulin-like peptidyl-prolyl isomerase [uncultured alpha
proteobacterium HF0070_17D04]
Length = 355
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 47/322 (14%), Positives = 81/322 (25%), Gaps = 52/322 (16%)
Query: 2 TSKVFTSLSD--FIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKR 59
TS +F S +K L T+ C+ +V + A TI+GE I +I
Sbjct: 59 TSHLFPSFPRGYLMKSLPTFVATAALCLSLVVPAQVIAQDRIAVATIDGESIWLDEIMAI 118
Query: 60 IALLKLQKINGELEKIAVQELIVE----TLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
L + + +L+ + L SG+ V A
Sbjct: 119 AETLPPEYQQQGI-AGIYDQLVDDVANSRLAAIAARSSGLD-KEEDVASAMRTAADR--- 173
Query: 116 SAEDFSSFLDKQGIGDNHFKQYL--AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
L + I K+ AIQ+ + V D + I ++
Sbjct: 174 -------VLAEAYITREVGKEITEEAIQAAYDTYV-ADTGSRETVTASHILVETEEEAKA 225
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
+ + + + + + + + G
Sbjct: 226 IIDQLM-----------DGADFAELAREKSTGPSGPGGGSLGSFGRGQMVPAFEAAAFGM 274
Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
NP TQ G I + +K E + Q
Sbjct: 275 PVGSFSD------------------NPVQTQFGWHVIQVSEK--GIQEAPALDQMRDQIA 314
Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315
+ A V+ LR I
Sbjct: 315 ANLSRQSFARIVETLRVGTTIE 336
>gi|77165426|ref|YP_343951.1| esterase/lipase/thioesterase family protein [Nitrosococcus oceani
ATCC 19707]
gi|76883740|gb|ABA58421.1| esterase/lipase/thioesterase family [Nitrosococcus oceani ATCC
19707]
Length = 318
Score = 37.3 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
K E+E I V Q T L L + + N F+ ++ S
Sbjct: 224 RQKVDEVETEEILPLPKRVYKALEQFQGRTLL-------ILSGKDLTANEFRDTISSSSA 276
Query: 144 WPDVVKNDFMLKYGNLEME 162
W ++++ + + +
Sbjct: 277 WRGLLRSRSIERRELSTAD 295
>gi|302519726|ref|ZP_07272068.1| lipoprotein [Streptomyces sp. SPB78]
gi|302428621|gb|EFL00437.1| lipoprotein [Streptomyces sp. SPB78]
Length = 200
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 51 ITDGDISKRIALL---------------KLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
IT+ + R+ L ++ +G L + +Q ++ + + + G+
Sbjct: 6 ITEAQLQHRVGELHDAVRELSSDAQTSERIISGSGSLARPTLQGMVRDRVVARAAADKGV 65
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
T V Q + G +L + G+ + L
Sbjct: 66 TVSRAEVQSARAQLTQQAGGEQGLKVEWLTRYGVPPSRLDDALRENIA 113
>gi|124021802|ref|YP_001016109.1| hypothetical protein P9303_00871 [Prochlorococcus marinus str. MIT
9303]
gi|123962088|gb|ABM76844.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT
9303]
Length = 259
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 81/249 (32%), Gaps = 27/249 (10%)
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAED-FS 121
L L + L + + +I + + + + ++ GLS E+
Sbjct: 26 LVLLRSKNLLRSLVQRMVIDQACEA-------VQLPAEKLDQAIASFCEQHGLSDEERLE 78
Query: 122 SFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIR 181
+L QG+ K L Q P +K ++ ++ + + Y +
Sbjct: 79 RYLSHQGL----IKPDLIHQLGIP--LKVQYLSLKEFSAKAEAHFLKRKEELDQFTYSL- 131
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+ D+ L ++ ++Q +A+ + + S G
Sbjct: 132 ---LRVEDSDLAHELYLQIEAGEADF--------TLLATEHSQGRESASHGLVGPASLGR 180
Query: 242 LHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
HP + L+ + P+ ++ + +++ + ++ ++ + IE+
Sbjct: 181 AHPLLRQRLRTATPGVLLEPFKIEQWWVVTRLEERQLATFDTNMQKRMAIELFDGWIEQQ 240
Query: 301 EAEYVKKLR 309
+ + +R
Sbjct: 241 TNQLISVVR 249
>gi|253991409|ref|YP_003042765.1| hypothetical protein PAU_03936 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782859|emb|CAQ86024.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 1137
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 21/104 (20%)
Query: 47 NGEVITDGDISKRIALLKLQKINGELEK------IAVQELIVETLKKQEIEKSGITFDSN 100
NGE +T+ ++ + L+ +Q N + A L + L+ I D
Sbjct: 1002 NGEPVTETELDELAKLVLIQNPNVNIRALKEFYPQATASL-DQLLRTI------IGMDGE 1054
Query: 101 TVNYFFVQHARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQS 142
V F Q A + L+++ F L NH + + I+
Sbjct: 1055 AVATRFAQFASHHHLNSQQLRFLDLLK------NHIRDFGTIEM 1092
>gi|120609364|ref|YP_969042.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
gi|120587828|gb|ABM31268.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax citrulli
AAC00-1]
Length = 303
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 15/143 (10%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR----LPKDCNKLEKFASK-IHDV 229
+R VL+++ + +AE +LR + + + S
Sbjct: 144 GERVHLRHVLYAVTPG---VDVQRLRERAEAELLQLRCAHDGGEAFARAARQWSNCPTGA 200
Query: 230 SIGKAQYLLESDLHPQF-QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G +L D P+F + + + ++ G+ + + + + +
Sbjct: 201 EGGDLGWLARGDCAPEFAREVFGAQEVGVLPRLVHSRFGLHVVEVVAR-----DAGRQRG 255
Query: 288 LSAQNTPTKIEKHEAEYVKKLRS 310
+ + +V LR
Sbjct: 256 YGEVREAVALALRQQSWVNALRQ 278
>gi|307708615|ref|ZP_07645079.1| foldase protein PrsA [Streptococcus mitis NCTC 12261]
gi|307615364|gb|EFN94573.1| foldase protein PrsA [Streptococcus mitis NCTC 12261]
Length = 312
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 68/214 (31%), Gaps = 27/214 (12%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------SN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D VN + + G E++ L + G+
Sbjct: 51 PSAQQVLLNMTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY--LIRTVLFSIPDNK 191
K + +++ + EY + + + +
Sbjct: 108 RKAQIRTS----------KLVELAVKKAAEAELTDDAYKKAYDEYTPDVTAQIIRLDNED 157
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + + DA+ ++L ++ K
Sbjct: 158 KAKEVLEKAKASDADFAQLAKDNSTDEKTKANGG 191
>gi|150003020|ref|YP_001297764.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC
8482]
gi|149931444|gb|ABR38142.1| peptidyl-prolyl cis-trans isomerase [Bacteroides vulgatus ATCC
8482]
Length = 446
Score = 37.3 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 59/179 (32%), Gaps = 9/179 (5%)
Query: 139 AIQSIW--PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRTVLFSIPDNKLQNQ 195
Q W +++ + Q + + +++ I + + N + +
Sbjct: 81 RRQVDWYRGKLLRTYLADAEKEEQAARRLYLQGEQRLQANDWIKIAHISKYLSQNASRQE 140
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKS 253
++ D+ LR D L + S G ++ + ++ + L+
Sbjct: 141 EMRVRQQMDSVYEALREGADFATLARRYSDDEACKNVGGVLPWMPVNKNMQEWIDKLESL 200
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEYVKKL 308
+ N + P+ + G+ + D+R + +N ++ AE ++L
Sbjct: 201 ERNKISAPFYSPMGIHIVKWIDRRQGVSFEEKREQLLNYLEKNGNCTWKELSAEQKEEL 259
>gi|254671966|emb|CBA04388.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis
alpha275]
Length = 512
Score = 37.3 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|149053881|gb|EDM05698.1| rCG34017, isoform CRA_b [Rattus norvegicus]
Length = 322
Score = 37.3 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 7/143 (4%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF-DSNTVNYFFVQHARNTGLSAE 118
ALL+ ++ L + A I E K E SG+ N VN + +
Sbjct: 2 SALLEQKEQQERLREAAALGDIREVQKLVE---SGVDVNSQNEVN-GWTCLHWACKRNHG 57
Query: 119 DFSSFLDKQGIGDN--HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
S+L + G K + +Q ++ ++ + + EIP K++ + V
Sbjct: 58 QVVSYLLQSGADREILTTKGEMPVQLTSRREIRKIMGVEEADDDEEIPQLKKESELPFVP 117
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQ 199
YL I ++ +Q
Sbjct: 118 NYLANPAFPFIYTPAAEDATQLQ 140
>gi|306829356|ref|ZP_07462546.1| peptidyl-prolyl cis-trans isomerase [Streptococcus mitis ATCC 6249]
gi|304428442|gb|EFM31532.1| peptidyl-prolyl cis-trans isomerase [Streptococcus mitis ATCC 6249]
Length = 313
Score = 37.3 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 67/196 (34%), Gaps = 24/196 (12%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + SS + ++ G+VIT+ +++
Sbjct: 1 MKKKLMAGAITLLSVATLAACSNSSEGKDLISMKGDVITEHQF-----FDEVKNNP---- 51
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G V+ + + G + ++S L + G+
Sbjct: 52 -TAQQVLLNMTIQKVFEQQYGSEVTDKDVDDAVAEEQKKYG---DSYNSVLQRAGMTPET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
K + + VK + QK + + + DN+ +
Sbjct: 108 RKAQIRTSKLVELAVKKAAESELT------DEAYQKAFESYTPDVTAQIIRL---DNEDK 158
Query: 194 NQGFVQKRIKDAEESR 209
+ ++K + +
Sbjct: 159 AKEVLEKAKAEGADFA 174
>gi|260591262|ref|ZP_05856720.1| putative peptidyl-prolyl cis-trans isomerase [Prevotella veroralis
F0319]
gi|260537127|gb|EEX19744.1| putative peptidyl-prolyl cis-trans isomerase [Prevotella veroralis
F0319]
Length = 474
Score = 37.3 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 47/155 (30%), Gaps = 25/155 (16%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLE 239
+L + + + K + D+ + L+ + +L K S + + G+ L +
Sbjct: 132 HILVGLNQRATKEEELKAKVLADSIYNALQHGANFGELAKKYSADRESAQNGGELPLLQK 191
Query: 240 SDLHPQFQ-NLLKKSQNNTTNPYVTQKGVEY----------------------IAICDKR 276
+F+ +L + P ++ G I + R
Sbjct: 192 GQTVQEFEHAMLALKPGEMSKPTLSPYGYHIIKMIAHEGLAPYDSLHARILQFIEMRGLR 251
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
D + L + + E+ + + +L
Sbjct: 252 DQIVDKKLDSLVQQAGKGVTREQLLDKQLAELEEK 286
>gi|218768240|ref|YP_002342752.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis Z2491]
gi|121052248|emb|CAM08573.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis Z2491]
gi|254670088|emb|CBA04992.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis
alpha153]
gi|325204222|gb|ADY99675.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 512
Score = 37.3 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|289620047|emb|CBI53491.1| unnamed protein product [Sordaria macrospora]
Length = 130
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTN-P 260
K+ +++R D + + S+ + G + + L P+F+ + + +TT P
Sbjct: 51 KKEEALAKIRDGADFGAVAREYSEDKARTGGSLGWKQKGTLDPEFERVAFALETSTTGKP 110
Query: 261 Y----VTQKGVEYIAICDKR 276
T G I + K+
Sbjct: 111 QIGEAKTPFGYHIIMVEGKK 130
>gi|330817346|ref|YP_004361051.1| Putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Burkholderia gladioli BSR3]
gi|327369739|gb|AEA61095.1| Putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Burkholderia gladioli BSR3]
Length = 325
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 33/303 (10%), Positives = 79/303 (26%), Gaps = 52/303 (17%)
Query: 23 IIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV 82
I+ A + +N +IT + + E +LI
Sbjct: 64 IVPAAASGAVAPLPANA---IARVNDVLITRDQFEQARRVANTPDTP-EARAALKNQLIA 119
Query: 83 ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH---FKQYLA 139
+ +Q K+ + + +++ +
Sbjct: 120 REVLRQAAVKAHYD-------------------TQAQVLAVVEQAKTTAMTEFWLHDQVR 160
Query: 140 IQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
S+ V+ + + + + + ++ +
Sbjct: 161 PASVTDAQVRAKY-------DEVVGLLGDTELKPSA----------IVLKDRAAADAALA 203
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG-KAQYLLESDLH-PQFQNLLKKSQNNT 257
+ + A+ ++L + ++ VS E + P + L+ +
Sbjct: 204 QLERGADFAQLARQLSQGPGAQQGGALNWVSFRLPIPEGGEQNWPQPLARALVALPRGGM 263
Query: 258 TN-PYVTQKGVEYIAICDKRDLG----GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNA 312
+ P G + + DKR ++ KA L Q +++ E V L A
Sbjct: 264 SREPIEAAGGYWILRVDDKRATRIPAFDDV--KAALRQQLETAALQRATIEVVVDLLKQA 321
Query: 313 IIH 315
I
Sbjct: 322 RIQ 324
>gi|325134515|gb|EGC57160.1| hypothetical protein NMBM13399_0963 [Neisseria meningitidis M13399]
Length = 512
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|15677110|ref|NP_274262.1| peptidyl-prolyl cis-trans isomerase-related protein [Neisseria
meningitidis MC58]
gi|7226478|gb|AAF41619.1| peptidyl-prolyl cis-trans isomerase-related protein [Neisseria
meningitidis MC58]
gi|316985097|gb|EFV64050.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis H44/76]
gi|325140532|gb|EGC63053.1| hypothetical protein NMBCU385_0927 [Neisseria meningitidis CU385]
gi|325200131|gb|ADY95586.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 512
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|329941154|ref|ZP_08290433.1| lipoprotein [Streptomyces griseoaurantiacus M045]
gi|329299685|gb|EGG43584.1| lipoprotein [Streptomyces griseoaurantiacus M045]
Length = 213
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 40/118 (33%), Gaps = 19/118 (16%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKI---------------NGELEKIAVQELIVETLKK 87
+ G+ IT + R+ ++ + G L + + L+++ +
Sbjct: 32 AAVVGGQRITVAQLENRVEEVRSAQRDATADEAQYAQEIARTGSLTRDTLHTLVLDRVLD 91
Query: 88 QEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD----NHFKQYLAIQ 141
+ + +G+T V + G + +++L + G+ + + Q
Sbjct: 92 RAAKDAGVTVTERDVQAMRTSLEQQAGGARGLRTAWLRQYGVAPARLDESLRTEVRAQ 149
>gi|217967474|ref|YP_002352980.1| trigger factor [Dictyoglomus turgidum DSM 6724]
gi|217336573|gb|ACK42366.1| trigger factor [Dictyoglomus turgidum DSM 6724]
Length = 431
Score = 36.9 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K E+I++ + + E I +N + A N G ++ L+++G
Sbjct: 351 DARKRIKIEMILDKIAEIE----NINISDEEINNVIKEIAENEGKEFKEIKRELEREG-T 405
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEME 162
N K+ L + + +F++K +E E
Sbjct: 406 INTLKRNLLREKV------REFLIKENVVEEE 431
>gi|330752745|emb|CBL88208.1| peptidyl-prolyl cis-trans isomerase [uncultured Leeuwenhoekiella
sp.]
Length = 706
Score = 36.9 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 24/262 (9%), Positives = 69/262 (26%), Gaps = 20/262 (7%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
+R L E + + E+ T K Q + F + A++ +
Sbjct: 455 KQRAIKLATVAKEIEPSQETINEVFNATTKFQMA------VSEDK--NSFEKVAKSENYT 506
Query: 117 AEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
+S + L Q ++++ F +++ + +
Sbjct: 507 VRPVNSI--------KALDETLPGQGSQREIIRWAFNEDTKTGDVQRFNVDGGYLVVQLT 558
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKD--AEESRLRLPKDCNKLEKFA-SKIHDVSIGK 233
+ ++ + ++ + ++ + + + V++
Sbjct: 559 SKTEKGLMPVDQASPRVTPIIRNEKKAELIKKQISGKDLNAIASANNVSVQTANGVNLKN 618
Query: 234 AQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ +NP KGV + + + ++ A + Q
Sbjct: 619 PTLAGAGTEPKVMGVAFGLDKGAVSNPIAGDKGVYVVKVTNVTPAR-KLDNYASFAMQKN 677
Query: 294 PTKIEKHEAEYVKKLRSNAIIH 315
++ L+ A I
Sbjct: 678 NADRANVNVVLLQALKDAADIE 699
>gi|254805018|ref|YP_003083239.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis
alpha14]
gi|254668560|emb|CBA06033.1| peptidyl-prolyl cis-trans isomerse D [Neisseria meningitidis
alpha14]
gi|319410487|emb|CBY90848.1| putative peptidyl-prolyl cis-trans isomerase D (PPIase D; rotamase
D) [Neisseria meningitidis WUE 2594]
Length = 512
Score = 36.9 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|149185664|ref|ZP_01863980.1| hypothetical protein ED21_21604 [Erythrobacter sp. SD-21]
gi|148830884|gb|EDL49319.1| hypothetical protein ED21_21604 [Erythrobacter sp. SD-21]
Length = 285
Score = 36.9 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI--SKRIALLKLQKINGELE 73
+ L++ + + A + ++ T++G IT G I R + ++ + N EL
Sbjct: 1 MRNVITLLLCSTLLVACEGGEAPTGQVAATVDGREITVGQINDELRASGIQADQSNEELA 60
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSN 100
A+ +I ++ E +
Sbjct: 61 NRALDAIINRSILAAEARDRELDTTPA 87
>gi|328700197|ref|XP_001949567.2| PREDICTED: hypothetical protein LOC100161003 [Acyrthosiphon pisum]
Length = 765
Score = 36.9 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 11/157 (7%)
Query: 64 KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDF-SS 122
+ ++I + QEL+ +K+QE+E+ G+ + + + E+
Sbjct: 531 QRRRIKPMPMEDIKQELLDIEIKQQELERQGVKL-EKDIRLKCNE--DLNNVDVEEMVLQ 587
Query: 123 FLDKQGIGDNHFKQ-----YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
+ + F++ YL Q + + + + L + K + E
Sbjct: 588 LFELVNEKNELFRKHAELMYLRKQHNFEEE-HAELEYQIRVLMSKPDHTKTDTEKAREEE 646
Query: 178 YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
LIR ++ + + + R+++AEE R +
Sbjct: 647 -LIRRLVEVVERRNEIVENLEKDRLREAEEDRSVFNQ 682
>gi|319651748|ref|ZP_08005874.1| trigger factor [Bacillus sp. 2_A_57_CT2]
gi|317396567|gb|EFV77279.1| trigger factor [Bacillus sp. 2_A_57_CT2]
Length = 428
Score = 36.9 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 13/85 (15%)
Query: 55 DISKRIALLKL-----QKINGELEKIAVQELIVET-------LKKQEIEKS-GITFDSNT 101
+ +R+ + + + +G+ E +++ E L + I K+ I
Sbjct: 319 EFEQRLQMQGMNLELYFQFSGQDEAALREQMKEEAEKRVRVNLTLEAIAKAENIEVSDEE 378
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDK 126
V + A +SA+ + L
Sbjct: 379 VTEELNKMAEMYNMSADQITQALGS 403
>gi|149374559|ref|ZP_01892333.1| transcriptional regulator OruR [Marinobacter algicola DG893]
gi|149361262|gb|EDM49712.1| transcriptional regulator OruR [Marinobacter algicola DG893]
Length = 344
Score = 36.9 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 9/114 (7%)
Query: 26 CIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETL 85
I ++ A ++++ ++G I + D L + E + A ET+
Sbjct: 187 SIATDCEFRFNAPANQVTMPLSGRPIRNDDTGLEFILANARSREREPSEQA-----DETV 241
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
++ + AR +S L G + +
Sbjct: 242 ----MQVREMIMSQPGRPCAMDNLARRLDMSPRTLRQHLSTAGTSFRTLRNEIR 291
>gi|332524209|ref|ZP_08400435.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein
[Rubrivivax benzoatilyticus JA2]
gi|332107544|gb|EGJ08768.1| putative peptidyl-prolyl cis-trans isomerase transmembrane protein
[Rubrivivax benzoatilyticus JA2]
Length = 635
Score = 36.9 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 3/97 (3%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFV---QHARNT 113
+R L EL++ + L+ + + + + D + FV Q A
Sbjct: 69 RQRPELDPKLLETPELKRETLDGLVRDRVLMATARQYHLVPDDARLQRLFVTDPQFAGLR 128
Query: 114 GLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
L QG+ F+Q L + V+
Sbjct: 129 NPDGSVNREILAAQGMSVEAFEQQLRQEFGMQQVLGA 165
>gi|326577521|gb|EGE27401.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Moraxella
catarrhalis O35E]
Length = 617
Score = 36.9 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 81/297 (27%), Gaps = 78/297 (26%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF---FVQHARNTGLSAEDFSSFLDKQG 128
L+++ ++ L + L + + G+T + + N S + F+++L + G
Sbjct: 81 LQQLILKRLTDKALLENQASYLGMTVSDEMITQILQHYEVFHDNGQFSNDRFAAYLQQNG 140
Query: 129 IGDNHFKQYLAIQSIWPDVVKN---------------------------------DFMLK 155
+ + ++ ++ D++ +
Sbjct: 141 LTKDVLFAIERLRLSLRQLITGIVGTAIYPNSEVSKLIDLQLEAREVWVHRYHWQDYVDQ 200
Query: 156 YGNLEMEIPANKQKMKN------------------------ITVREYLIRTVLFSIPDNK 191
+ +I A + ++ T +E + + + +N
Sbjct: 201 VQISDAQIQAYFDEHQDKLIKPATVDLSYIELDPNVLSVGTPTEQEINAQYANY-LRENG 259
Query: 192 LQNQGFVQKRIKDAEESRLRLPK------DCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ + + + + +++ R K E A D G ++ S
Sbjct: 260 ITDGRELAQILLTGPDAQNRAAKIQSKLNAGESFEALAKAHSDDPSGSNGGVIGSFNPSV 319
Query: 246 F--------QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTP 294
F Q L S + P T G + + A + Q
Sbjct: 320 FGEYAAGVEQALSGLSVGQISQPVQTGFGYHIFKVTK---ASNDTPNIASMRDQLMD 373
>gi|325202068|gb|ADY97522.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
Length = 512
Score = 36.9 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|224436614|ref|ZP_03657623.1| hypothetical protein HcinC1_01640 [Helicobacter cinaedi CCUG 18818]
gi|313143113|ref|ZP_07805306.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128144|gb|EFR45761.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 492
Score = 36.9 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 54 GDISKRIALL-KLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---- 108
IS+ +L + Q + ++A+Q LI + G+ V V
Sbjct: 64 SQISQFGGMLDEAQAKQFGIPQMALQRLIQQVQILNLANDLGLVVSDKEVGEEIVNAKVY 123
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
S E + L +QG+ + F++ +
Sbjct: 124 VDDKGEFSQEVYRKALKEQGMSPSEFEEMVR 154
>gi|212690534|ref|ZP_03298662.1| hypothetical protein BACDOR_00016 [Bacteroides dorei DSM 17855]
gi|237708010|ref|ZP_04538491.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA]
gi|212666883|gb|EEB27455.1| hypothetical protein BACDOR_00016 [Bacteroides dorei DSM 17855]
gi|229457996|gb|EEO63717.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 36.9 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 54/160 (33%), Gaps = 11/160 (6%)
Query: 126 KQGIGDNHFKQYLAIQSIW--PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRT 182
G + + Q W ++K + + + + + +++ I
Sbjct: 69 AHDTGIDTLSAF-RRQMAWYRGKLLKKYLVDAEKEEQTVRQLYLRSEQRLQTNDWIRIAH 127
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS----IGKAQYLL 238
+ +P N + + D+ + L+ D + L S D + G ++
Sbjct: 128 ISKYLPQNVGRQDELRVLQQMDSVYAALQGGADFSALACRYS--DDTTCKNMGGLLPWMP 185
Query: 239 ESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAICDKRD 277
+ ++ + L +N + P+ + G+ I D++
Sbjct: 186 VNKNMQEWIDKLASLEKNKISAPFYSPMGIHIIKWIDRKP 225
>gi|219670384|ref|YP_002460819.1| trigger factor [Desulfitobacterium hafniense DCB-2]
gi|219540644|gb|ACL22383.1| trigger factor [Desulfitobacterium hafniense DCB-2]
Length = 426
Score = 36.9 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
EL A + L E + + + GIT +N + A S E+ L +G
Sbjct: 347 ELRPRASENLKTELVLEAIAKVEGITVSEEELNNELAKLAERYQTSPENLKQALMARG 404
>gi|270004992|gb|EFA01440.1| hypothetical protein TcasGA2_TC030701 [Tribolium castaneum]
Length = 18024
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 33/230 (14%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E+ + + F + + E L+ GI K++ Q+ W +
Sbjct: 4164 ELAQYQKERSETELEKVFDE---RNTMQREQ---GLNVTGIHVQP-KEFKEEQTEWQKSI 4216
Query: 149 KND----FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
KN + K LE E + K++ + + F+IP K+ + + +
Sbjct: 4217 KNKKTEDYYSKIQELENEQVTKEIKLREASHQ--------FAIPGEKIVSSSLAKGMAQK 4268
Query: 205 AEESRLRLPKDCN--------KLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQN 255
+E+ P+ + K E+ + D V + K E + Q + ++ S+
Sbjct: 4269 YQENLEEKPEKVDLRPIPYLPKAEEKVTPHRDQVQLRKTDKGKEME---QQREVIVDSKK 4325
Query: 256 NTTNPYVTQKGVE--YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
P T+ GV I + +R E ++ T T+ E +
Sbjct: 4326 GAYPPDPTESGVHGREIYVTKQRQTQKENVGDKEITRHITATETTDVEHK 4375
>gi|220918358|ref|YP_002493662.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956212|gb|ACL66596.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 587
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 81/283 (28%), Gaps = 56/283 (19%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE----KIAVQELIVETLKKQEI 90
S + I+ +V+ ++ + +A ++ G K +Q LI L E
Sbjct: 66 SPLFAQTPVARIDDQVVRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRLLIMEA 125
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ G+ + + Q A ++ + + + + + ++ ++ + V+
Sbjct: 126 REMGL----DELPELKEQLAVFKDVTLRETLQQQLTKDVKPDALE----VERVYKESVR- 176
Query: 151 DFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
+ ++ E A K + + ++ I + +
Sbjct: 177 RWKVRSLLFRQEEDAAAVKPALAGGKGF----------------AELAKQLIAEKKA--- 217
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYI 270
+ + + L L + T P Q G +
Sbjct: 218 -----------------EGTGEPEVLPPDQTLPAVAAALKPLQKGEATTPLKLQNGFAVL 260
Query: 271 AICDK-------RDLGGEIALKAYLSAQNTPTKIEKHEAEYVK 306
+ D + E A S Q ++ + +YVK
Sbjct: 261 YVEDIVYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRKYVK 303
>gi|294775655|ref|ZP_06741163.1| PPIC-type PPIASE domain protein [Bacteroides vulgatus PC510]
gi|294450499|gb|EFG18991.1| PPIC-type PPIASE domain protein [Bacteroides vulgatus PC510]
Length = 441
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 59/179 (32%), Gaps = 9/179 (5%)
Query: 139 AIQSIW--PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRTVLFSIPDNKLQNQ 195
Q W +++ + Q + + +++ I + + N + +
Sbjct: 76 RRQVDWYRGKLLRTYLADAEKEEQAARRLYLQGEQRLQANDWIKIAHISKYLSQNASRQE 135
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQNLLKKS 253
++ D+ LR D L + S G ++ + ++ + L+
Sbjct: 136 EMRVRQQMDSVYEALREGADFATLARRYSDDEACKNVGGVLPWMPVNKNMQEWIDKLESL 195
Query: 254 Q-NNTTNPYVTQKGVEYIAICDKRDLGGEIALK---AYLSAQNTPTKIEKHEAEYVKKL 308
+ N + P+ + G+ + D+R + +N ++ AE ++L
Sbjct: 196 ERNKISAPFYSPMGIHIVKWIDRRQGVSFEEKREQLLNYLEKNGNCTWKELSAEQKEEL 254
>gi|317050625|ref|YP_004111741.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum
indicum S5]
gi|316945709|gb|ADU65185.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfurispirillum
indicum S5]
Length = 280
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 85/304 (27%), Gaps = 46/304 (15%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIA----LLKLQ-K 67
+K +T L + ++ + A S + T+ IT D+++ I L+ Q +
Sbjct: 1 MKKMTLRLCLAAGLTLGTLAGVALA-SDTVLATVEKRQITQQDLNRAIQSLPDELRAQVR 59
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
N E + + EL+ + + E ++ N V L
Sbjct: 60 SNPEFKAQLLDELVRQEMVYHEAQRQNFQ--ENEV--------VRNRLKL---------- 99
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSI 187
L + + ++ E ++ ++ K V + + +
Sbjct: 100 ----------LERELMINAFLEEYLSRNVSVSEQDLKEFYERNKARFVTQATVAASHILL 149
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
D + + + R + +L + + E +
Sbjct: 150 EDEQKAREVLRRARAGE-NFGQLAREHSLDPGSARQEGFIGEFYRGQGLVKEFEDAAFAA 208
Query: 248 NLLKKSQNNTTNPYVTQKGVEYIAICDK---RDLGGEIALKAYLSAQNTPTKIEKHEAEY 304
+ T+ G I + +K R + + A + +
Sbjct: 209 EV-----GVHPELVRTEFGYHIIKVHEKNPSRTVSLDEARDRVTEIIAEEKQNQAL-MRL 262
Query: 305 VKKL 308
+++L
Sbjct: 263 IQEL 266
>gi|171059049|ref|YP_001791398.1| peptidyl-prolyl cis-trans isomerase [Leptothrix cholodnii SP-6]
gi|170776494|gb|ACB34633.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Leptothrix
cholodnii SP-6]
Length = 299
Score = 36.9 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 84/284 (29%), Gaps = 48/284 (16%)
Query: 39 SSRIRTTINGEVITDGDIS---KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGI 95
++++ +N E I+ I+ +R LK ++ K ++ LI + L QE ++ I
Sbjct: 39 ATQVAAKVNKEEISVHQINFVLQRQPGLKPEQAPA-ATKAVLEGLIDQELAIQEAQEQKI 97
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLK 155
D V + A+ + +
Sbjct: 98 DRDPKVVMAI--EAAKR----------------------------EILARAYADKLADTV 127
Query: 156 YGNLEMEIPANKQKMKNITVR--EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLP 213
+ EI A + + + Y + + +N + + K ++E +L
Sbjct: 128 SKPTDDEIAAYYKDKPALFAQRRVYTLHEFSIEAAGDAAKNVTALVQAAKSSDELSKQLT 187
Query: 214 KDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAIC 273
K + +L + + + + G+ + +
Sbjct: 188 AASVKFAS-----------RVVTQPAENLPLAMIDRIGSLAEGQSLAIPSANGISAVFVA 236
Query: 274 DKRDLGGEI-ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ K + + K A+ +K+LR +A I Y
Sbjct: 237 AAKPQPVTAEQAKPAIEQFLLNDRKRKLVADEMKRLRGSAKISY 280
>gi|253575670|ref|ZP_04853006.1| trigger factor tig [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845008|gb|EES73020.1| trigger factor tig [Paenibacillus sp. oral taxon 786 str. D14]
Length = 473
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ G+ EK L++E + + I + +N A + E+ + L
Sbjct: 347 QMQGDAEKRVRNNLVLEAI----AKAEKIEVTQDEINKELNDMAEAYKRTPEEIRNILAA 402
Query: 127 QG 128
G
Sbjct: 403 NG 404
>gi|237725282|ref|ZP_04555763.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D4]
gi|229436548|gb|EEO46625.1| peptidyl-prolyl cis-trans isomerase [Bacteroides dorei 5_1_36/D4]
Length = 446
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 51/160 (31%), Gaps = 11/160 (6%)
Query: 126 KQGIGDNHFKQYLAIQSIW--PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRT 182
G + + Q W ++K + + + + + +++ I
Sbjct: 69 AHDTGIDTLSAF-RRQMAWYRGKLLKKYLVDAEKEEQTVRQLYLRSEQRLQTNDWIRIAH 127
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE--- 239
+ +P N + + D+ + L+ D + L S D + LL
Sbjct: 128 ISKYLPQNVGRQDELRVLQQMDSVYAALQGGADFSALACRYS--DDTTCKNMGGLLPWMP 185
Query: 240 --SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
++ L +N + P+ + G+ I D++
Sbjct: 186 VNKNMQEWIDKLASLEKNKISAPFYSPMGIHIIKWIDRKP 225
>gi|168701470|ref|ZP_02733747.1| hypothetical protein GobsU_18230 [Gemmata obscuriglobus UQM 2246]
Length = 594
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 67/257 (26%), Gaps = 26/257 (10%)
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ + + + + G+ + + +S E + + QG
Sbjct: 334 QKELERFVNKQVIAHAFARKGLALAPADPEAALNEICTASRMSREQLAQAVQSQGFTLAE 393
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT-----VLFSIP 188
W + V + + M + + + +R I
Sbjct: 394 ----------WNEDVN---LPRVMLAHMCKAKVAPPTEAELRQAFDVRYGEKLDCRVIIW 440
Query: 189 DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF-- 246
N+ + Q +K +E + + D + Q
Sbjct: 441 TNEDEAQKAYEKVRGSEKEFDAHARRSAVAGQPRTGVAADGRVAPIPRAQPLKEEEQVHH 500
Query: 247 QNLLKKSQNNTTNPYVTQKG-VEYIAICDKRDLGGEIAL-----KAYLSAQNTPTKIEKH 300
+ + + + + G ++ + R + + KA L + K+
Sbjct: 501 AAVKNLQRGDVSPLLRIEPGSFGFMVVKCDRVIPADKTKSFEKEKAALMLEALDAKVVNE 560
Query: 301 EAEYVKKLRSNAIIHYY 317
+ +L A Y+
Sbjct: 561 FPRFRNELMQQAAPKYH 577
>gi|119898534|ref|YP_933747.1| hypothetical protein azo2243 [Azoarcus sp. BH72]
gi|119670947|emb|CAL94860.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 299
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 76/282 (26%), Gaps = 46/282 (16%)
Query: 40 SRIRTTINGEVITDGDISKRIALLKLQKIN--GELEKIAVQELIVETLKKQEIEKSGITF 97
+ +N I+ + + I + + ++ LI E L Q+ +
Sbjct: 30 EAVAARVNDRAISVSQVDQAIPRDEPMSADDIARARSAVLESLIDEELMVQKANARRLDL 89
Query: 98 DSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYG 157
+ V+ +L
Sbjct: 90 EPR-VSEELEA----------------------------------------ARRRILARA 108
Query: 158 NLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
LE + + Y LF+ ++ +Q R + E R ++ +
Sbjct: 109 YLEQVTAVDPRPDDEAVSAFYRSHPALFAERRIYSFHEFNIQARPERLEALRALAVRERD 168
Query: 218 KLEKFASKIHDVSI--GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAI-CD 274
A+ + + L L + N + ++ T G E + +
Sbjct: 169 SAAIAATLEREGLSFAARVAVLPAEQLPFERLNAFSRLKDGDNLLTPTPYGAELVHLASS 228
Query: 275 KRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+R E + + + + + + ++LR +A I Y
Sbjct: 229 RRQPLDEASARPVIEQFLRNRERVELARDEARRLRKSAEIEY 270
>gi|213586381|ref|ZP_03368207.1| peptidyl-prolyl cis-trans isomerase SurA [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 102
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDV-SIGKAQYLLESDLHPQFQNLLKK-SQNN 256
+R ++ R D KL S G+ + +L F L + +
Sbjct: 1 AQRQAESIVEEARNGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGD 60
Query: 257 TTNPYVTQKGVEYIAICDKR 276
P + G + + D R
Sbjct: 61 IVGPIRSGVGFHILKVNDLR 80
>gi|155030129|gb|ABS90333.1| hypothetical protein A1S_3908 [Acinetobacter baumannii ATCC 17978]
Length = 404
Score = 36.9 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + D +D + + YL N ++ + E + +LR A I Y
Sbjct: 232 LDVLDHKDWTSDSEFRLYLRHDNIDALLKNMKKESIAELREKAYIEY 278
>gi|254433839|ref|ZP_05047347.1| hydrolase, exosortase system type 1 associated [Nitrosococcus
oceani AFC27]
gi|207090172|gb|EDZ67443.1| hydrolase, exosortase system type 1 associated [Nitrosococcus
oceani AFC27]
Length = 286
Score = 36.9 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 84 TLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSI 143
K E+E I V Q T L L + + N F+ ++ S
Sbjct: 192 RQKVDEVETEEILPLPKRVYKALEQFQGRTLL-------ILSGKDLTANEFRDTISSSSA 244
Query: 144 WPDVVKNDFMLKYGNLEME 162
W ++++ + + +
Sbjct: 245 WRGLLRSRSIERRELSTAD 263
>gi|145589120|ref|YP_001155717.1| hypothetical protein Pnuc_0937 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047526|gb|ABP34153.1| hypothetical protein Pnuc_0937 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 487
Score = 36.9 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 51/153 (33%), Gaps = 16/153 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGEL 72
++++ F++ F + I SY + +NG+ IT ++ A + +++ G +
Sbjct: 12 LQIVLMLFIVPSFVMFGISSYSGFLDKETDLVKVNGKPITAQEVDS-AAKRQAERVGGNI 70
Query: 73 --------EKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR-----NTGLSAED 119
+ + EL+ + + + + + + S +D
Sbjct: 71 QIAQSLQFRQAILNELLQQRILGFAVINLRLQVGKEALIKSLQNIPQIRALYRQDGSFDD 130
Query: 120 --FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
F L G+ + F A V +
Sbjct: 131 VRFKQLLASNGLNEEQFYASQAFDLKISQFVNS 163
>gi|265754204|ref|ZP_06089393.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA]
gi|263234913|gb|EEZ20468.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. 3_1_33FAA]
Length = 427
Score = 36.9 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 51/160 (31%), Gaps = 11/160 (6%)
Query: 126 KQGIGDNHFKQYLAIQSIW--PDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYL-IRT 182
G + + Q W ++K + + + + + +++ I
Sbjct: 50 AHDTGIDTLSAF-RRQMAWYRGKLLKKYLVDAEKEEQTVRQLYLRSEQRLQTNDWIRIAH 108
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE--- 239
+ +P N + + D+ + L+ D + L S D + LL
Sbjct: 109 ISKYLPQNVGRQDELRVLQQMDSVYAALQGGADFSALACRYS--DDTTCKNMGGLLPWMP 166
Query: 240 --SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRD 277
++ L +N + P+ + G+ I D++
Sbjct: 167 VNKNMQEWIDKLASLEKNKISAPFYSPMGIHIIKWIDRKP 206
>gi|189235987|ref|XP_971849.2| PREDICTED: similar to BMKETTIN [Tribolium castaneum]
Length = 20466
Score = 36.9 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 33/230 (14%)
Query: 89 EIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVV 148
E+ + + F + + E L+ GI K++ Q+ W +
Sbjct: 4178 ELAQYQKERSETELEKVFDE---RNTMQREQ---GLNVTGIHVQP-KEFKEEQTEWQKSI 4230
Query: 149 KND----FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
KN + K LE E + K++ + + F+IP K+ + + +
Sbjct: 4231 KNKKTEDYYSKIQELENEQVTKEIKLREASHQ--------FAIPGEKIVSSSLAKGMAQK 4282
Query: 205 AEESRLRLPKDCN--------KLEKFASKIHD-VSIGKAQYLLESDLHPQFQNLLKKSQN 255
+E+ P+ + K E+ + D V + K E + Q + ++ S+
Sbjct: 4283 YQENLEEKPEKVDLRPIPYLPKAEEKVTPHRDQVQLRKTDKGKEME---QQREVIVDSKK 4339
Query: 256 NTTNPYVTQKGVE--YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
P T+ GV I + +R E ++ T T+ E +
Sbjct: 4340 GAYPPDPTESGVHGREIYVTKQRQTQKENVGDKEITRHITATETTDVEHK 4389
>gi|50954512|ref|YP_061800.1| trigger factor [Leifsonia xyli subsp. xyli str. CTCB07]
gi|67461740|sp|Q6AG00|TIG_LEIXX RecName: Full=Trigger factor; Short=TF
gi|50950994|gb|AAT88695.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 466
Score = 36.9 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
L+ E ++ + + + + VQ A + +F L + G
Sbjct: 341 LLDEI-----AQRENVKVSQDELTQYLVQGAAQYNMDPNEFVKILGENG 384
>gi|56807615|ref|ZP_00365517.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Streptococcus
pyogenes M49 591]
Length = 324
Score = 36.9 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
N E+ + A+ L++ + + + G V + + A G S FS+ L +
Sbjct: 22 TKNTEVSQKAMLNLVISRVFE---AQYGDKVSKKEVEKAYHKTAEQYGAS---FSAALAQ 75
Query: 127 QGIGDNHFKQYLA 139
+ FK+ +
Sbjct: 76 SSLTPETFKRQIR 88
>gi|289666150|ref|ZP_06487731.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 294
Score = 36.9 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 60/215 (27%), Gaps = 14/215 (6%)
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
F + A L + L + +Q A +I V+ +I
Sbjct: 72 EFVREFADRLLLVEQARRVHLQDDPVVAARIRQ--ATDAILAKAVQTRARESARIDASQI 129
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR----LPKDCNKL 219
A + +L + P + + + A RL+ +L
Sbjct: 130 KAQFDAHPHDYDEVHLSHLFVALKPQGEARRGTPLTDAQALARAQRLKQQLESGTPFAEL 189
Query: 220 EKFAS--KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S G+ + ++ F + + + P +G I + +R
Sbjct: 190 AMRESDDGSTAAEGGELSPIFLRNVADAFVAPVQDLAVGQVSAPVRGPEGYHLIRVDARR 249
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A Q ++ A+ +++LR
Sbjct: 250 PATLDSA-----RGQIEVQLRDQAAADALEQLRQA 279
>gi|89895951|ref|YP_519438.1| hypothetical protein DSY3205 [Desulfitobacterium hafniense Y51]
gi|119370876|sp|Q24SJ8|TIG1_DESHY RecName: Full=Trigger factor 1; Short=TF 1
gi|89335399|dbj|BAE84994.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 426
Score = 36.9 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
EL A + L E + + + GIT +N + A S E+ L +G
Sbjct: 347 ELRPRASENLKTELVLEAIAKVEGITVSEEELNNELAKLAERYQTSPENLKQALMARG 404
>gi|103486661|ref|YP_616222.1| hypothetical protein Sala_1173 [Sphingopyxis alaskensis RB2256]
gi|98976738|gb|ABF52889.1| hypothetical protein Sala_1173 [Sphingopyxis alaskensis RB2256]
Length = 673
Score = 36.9 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 53/158 (33%), Gaps = 17/158 (10%)
Query: 7 TSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRI-RTTINGEVITDGDISKRIA--LL 63
+++ F+ L V + F + + ++ + GE I G++ R+
Sbjct: 36 STIGKFLALAFVVLVGVAFALSDVTGNSTFGGIGGANVAKVGGEEIGVGELRDRVRQAYD 95
Query: 64 KLQKINGELE----------KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNT 113
+ ++ L + +LI Q + G ++
Sbjct: 96 QARRNQPGLTMAAFVENGGLDQVLGQLIDGLAFDQYATELGFGVSKRLIDGRIADLPAFA 155
Query: 114 GLS--AED--FSSFLDKQGIGDNHFKQYLAIQSIWPDV 147
G+S + F +FL + GI + ++ L Q + +
Sbjct: 156 GVSGKFDQTVFENFLRQNGISEAQLRRDLRQQILLEQL 193
>gi|304407480|ref|ZP_07389132.1| trigger factor [Paenibacillus curdlanolyticus YK9]
gi|304343431|gb|EFM09273.1| trigger factor [Paenibacillus curdlanolyticus YK9]
Length = 432
Score = 36.9 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ G+ EK L++E + + GI VN ++ A++ +
Sbjct: 347 QMRGDAEKRVRNNLVLEAI----AKAEGIEVSEEDVNAELETLSKAYNRPADELRDIFSR 402
Query: 127 QGIGDNHFKQYLA 139
G + K+ ++
Sbjct: 403 NG-NLENLKEDVS 414
>gi|194397602|ref|YP_002037615.1| foldase protein PrsA [Streptococcus pneumoniae G54]
gi|194357269|gb|ACF55717.1| foldase protein PrsA [Streptococcus pneumoniae G54]
Length = 219
Score = 36.9 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------NN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D V+ + + G E++ L + G+
Sbjct: 51 PSAQQVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLA 139
K +
Sbjct: 108 RKAQIR 113
>gi|310791533|gb|EFQ27060.1| ppic-type ppiase domain-containing protein [Glomerella graminicola
M1.001]
Length = 146
Score = 36.9 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 6/94 (6%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260
K+ ++LR +++ + S+ G + + L P+F+++ S + T +P
Sbjct: 54 KKEEALAKLRDGTKFDEVAREFSEDKARQGGSLGWKTKGSLDPKFEDVAFALSTSTTASP 113
Query: 261 Y----VTQKGVEYIAICDKRDLGGEIALKAYLSA 290
T+ G I + D + A
Sbjct: 114 VYGEAKTEFGYHIIMV-SIGDNSHGTPQRTLTRA 146
>gi|197927425|ref|NP_001128171.1| ankyrin repeat domain-containing protein 40 [Rattus norvegicus]
gi|149053880|gb|EDM05697.1| rCG34017, isoform CRA_a [Rattus norvegicus]
gi|187469047|gb|AAI66790.1| Ankrd40 protein [Rattus norvegicus]
Length = 363
Score = 36.9 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 7/143 (4%)
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITF-DSNTVNYFFVQHARNTGLSAE 118
ALL+ ++ L + A I E K E SG+ N VN + +
Sbjct: 2 SALLEQKEQQERLREAAALGDIREVQKLVE---SGVDVNSQNEVN-GWTCLHWACKRNHG 57
Query: 119 DFSSFLDKQGIGDN--HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVR 176
S+L + G K + +Q ++ ++ + + EIP K++ + V
Sbjct: 58 QVVSYLLQSGADREILTTKGEMPVQLTSRREIRKIMGVEEADDDEEIPQLKKESELPFVP 117
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQ 199
YL I ++ +Q
Sbjct: 118 NYLANPAFPFIYTPAAEDATQLQ 140
>gi|125975221|ref|YP_001039131.1| trigger factor [Clostridium thermocellum ATCC 27405]
gi|256003117|ref|ZP_05428109.1| trigger factor [Clostridium thermocellum DSM 2360]
gi|281419195|ref|ZP_06250211.1| trigger factor [Clostridium thermocellum JW20]
gi|166229040|sp|A3DJ09|TIG_CLOTH RecName: Full=Trigger factor; Short=TF
gi|125715446|gb|ABN53938.1| trigger factor [Clostridium thermocellum ATCC 27405]
gi|255992808|gb|EEU02898.1| trigger factor [Clostridium thermocellum DSM 2360]
gi|281407061|gb|EFB37323.1| trigger factor [Clostridium thermocellum JW20]
gi|316939385|gb|ADU73419.1| trigger factor [Clostridium thermocellum DSM 1313]
Length = 428
Score = 36.9 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLD 125
Q +L A ++ + + ++ + I +N + A++ + EDF L
Sbjct: 342 QTFRNQLRDRAHDDIKRQLVLEKVAKVEDIKVSDEEINEEAEKIAKSYNMEHEDFKKHLR 401
Query: 126 KQGIGDNHFKQYLAIQSIWPDVV 148
I +Y+ ++ V
Sbjct: 402 DDDI------EYIKATILFKKAV 418
>gi|317058773|ref|ZP_07923258.1| trigger factor [Fusobacterium sp. 3_1_5R]
gi|313684449|gb|EFS21284.1| trigger factor [Fusobacterium sp. 3_1_5R]
Length = 443
Score = 36.9 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Query: 81 IVETLKKQEIEK-SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L EI + I V + A+ G+ L + FK +
Sbjct: 368 IKSDLVLAEIARNEKIEATDEDVTEKMAEVAKMYGMEVAKMEEELKAHN-QLDAFKYSVR 426
Query: 140 IQSIWPDVV 148
+ + +
Sbjct: 427 AEIVMKKTI 435
>gi|159044344|ref|YP_001533138.1| putative peptidyl-prolyl cis-trans isomerase [Dinoroseobacter
shibae DFL 12]
gi|157912104|gb|ABV93537.1| putative peptidyl-prolyl cis-trans isomerase [Dinoroseobacter
shibae DFL 12]
Length = 614
Score = 36.9 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 43/146 (29%), Gaps = 21/146 (14%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDI------------SKRIAL 62
+ ++ + S+ S+ ++ IT + +R
Sbjct: 8 FFMFILLGLLIVALAGFGISSFGGSNARVGSVGDTDITVDEYARALQTQLRAAGQQRGRA 67
Query: 63 LKLQKING-ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNY------FFVQHARNTGL 115
+ + + L++ + +L+ E K G++ V F
Sbjct: 68 VSMAEARELGLDRQVLAQLVNTAAIDNEAAKLGVSVGDMRVAEQIQTIPAFSGIGGGFDR 127
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQ 141
A +F+ L + + F+ + +
Sbjct: 128 EAYEFT--LQQNNLSPEEFEADVRNE 151
>gi|186472433|ref|YP_001859775.1| putative CheA signal transduction histidine kinase [Burkholderia
phymatum STM815]
gi|184194765|gb|ACC72729.1| putative CheA signal transduction histidine kinase [Burkholderia
phymatum STM815]
Length = 796
Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 35/98 (35%), Gaps = 12/98 (12%)
Query: 56 ISKRIALLKLQKINGELEKIAVQ-----ELIVE-------TLKKQEIEKSGITFDSNTVN 103
I +RIA K Q E+E + L + ++ ++ + DS +
Sbjct: 643 IEQRIAFGKPQAGVIEIEVGVAEGALQITLSDDGRGLALSRIRGIAADRGWLQPDSQMSD 702
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ G S + + +G+G + + ++ +
Sbjct: 703 EAIAEFIFRPGFSTAQNVTEVSGRGVGMDAVRDFIRRE 740
>gi|212550676|ref|YP_002308993.1| peptidyl-prolyl cis-trans isomerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548914|dbj|BAG83582.1| putative peptidyl-prolyl cis-trans isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 711
Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 14/105 (13%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWA--MSSRIRTTINGEVITDGDISKRIALLKLQKI 68
+ ++ L F I + S INGE I D R+ I
Sbjct: 11 SLLLVMVVGVALFSFIIGDFLRSGSAFINQKKENIVVINGEAINCQDYQTRVEDYINNAI 70
Query: 69 ------------NGELEKIAVQELIVETLKKQEIEKSGITFDSNT 101
+++++ + E+I + L +E +K G+
Sbjct: 71 RNNNNQPLTDDEQYQIKQMILNEMIDDILLFKEAKKLGLVVSKEE 115
>gi|325963650|ref|YP_004241556.1| trigger factor [Arthrobacter phenanthrenivorans Sphe3]
gi|323469737|gb|ADX73422.1| trigger factor [Arthrobacter phenanthrenivorans Sphe3]
Length = 465
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + E+I++ + EK + N + + V A G+ F+ +D+
Sbjct: 332 EVRANTARAFQNEIILDAI----AEKEEVNVSQNELIDYIVTTASQYGMDPNQFAQIIDQ 387
Query: 127 QG 128
G
Sbjct: 388 SG 389
>gi|319936251|ref|ZP_08010670.1| trigger factor [Coprobacillus sp. 29_1]
gi|319808683|gb|EFW05225.1| trigger factor [Coprobacillus sp. 29_1]
Length = 316
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 19/147 (12%)
Query: 58 KRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSA 117
+ ++LQ + + + V+ I E L IE S + + + QH ++ +
Sbjct: 158 QNQMKVQLQSQHDQTYRTNVENAIFEKL----IEDSEVEVNDEDIQRAMEQHIQHIRMDL 213
Query: 118 E----DFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI 173
+L G + +Q + + + EI +
Sbjct: 214 AKQGMQLEQYLQMMGSTEEALRQQIEP--------SAKQQATFEAIIDEIANVENL---T 262
Query: 174 TVREYLIRTVLFSIPDNKLQNQGFVQK 200
T E + + + N++ + +++
Sbjct: 263 TTDEEIDQQIEMIAQQNQMTKEEVLER 289
>gi|295698384|ref|YP_003603039.1| ppic-type ppiase domain protein [Candidatus Riesia pediculicola
USDA]
gi|291157251|gb|ADD79696.1| ppic-type ppiase domain protein [Candidatus Riesia pediculicola
USDA]
Length = 622
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTGLSAEDFSSFLDKQG 128
+ + +LI ETL Q K GI + + N + SFL +
Sbjct: 77 IRVQVLNKLIQETLLSQYSMKLGIKVSEDKIKEEIRNLSIFQENGKFDKRKYKSFLLRNQ 136
Query: 129 IGDNHFKQYLAIQSIWPDVVKNDFMLK 155
I Q + + V+++ F+ +
Sbjct: 137 ISGKTLSQEIKKNFLTKKVMQSYFLDE 163
>gi|258509270|ref|YP_003172021.1| peptidylprolyl isomerase [Lactobacillus rhamnosus GG]
gi|257149197|emb|CAR88170.1| Endopeptidase maturation protein prtM [Lactobacillus rhamnosus GG]
gi|259650551|dbj|BAI42713.1| peptidylprolyl isomerase [Lactobacillus rhamnosus GG]
Length = 300
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 83/272 (30%), Gaps = 52/272 (19%)
Query: 14 KLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
K L F+ + I+ + +S S T +G +T + K K +
Sbjct: 3 KKLRVPFLAAMMASSIMLLSGCQSKQADSTTVATYSGGQVTQ------ASFYKELKQSPT 56
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + LI L + G + + +V+ + + G E+F+SFL + G
Sbjct: 57 TKTVLANLLIYRALN----KAYGKSVSTKSVDNTYNSYKNEYG---ENFTSFLSQNGFSK 109
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ F+Q + + +K+K +T +
Sbjct: 110 SSFRQSIRTNLL-------------------SEVALKKLKKVTNSQ-------LKTAWKT 143
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF---ASKIH-DVSIGKAQYL-----LESDL 242
Q + VQ + E + ++ D + F A D S L
Sbjct: 144 YQPKVTVQHILTSDESTAKQVISDLAAGKDFTTLAKTYSIDTSTKDKGGKVSFESSSKSL 203
Query: 243 HPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAI 272
F++ K T P G E I +
Sbjct: 204 DSTFKDAAYKLKNGEYTQSPVKVTNGYEVIKM 235
>gi|187251883|ref|YP_001876365.1| hypothetical protein Emin_1480 [Elusimicrobium minutum Pei191]
gi|186972043|gb|ACC99028.1| hypothetical protein Emin_1480 [Elusimicrobium minutum Pei191]
Length = 286
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 98/306 (32%), Gaps = 31/306 (10%)
Query: 13 IKLLTTYFVLIIFCIVPIVSYKSWAMS--SRIRTTINGEVITDGDISKRIALLKLQKING 70
++ + VL K A + S + G IT D + +
Sbjct: 1 MRRIVIISVLAALLSAGCKEEKPAAKAHPSNALANVGGVFITQKDFD-NAVIDETLNRKY 59
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
LI +++Q I+++ + S F DFS L++
Sbjct: 60 LETSFGKNALINALVREQLIQQASLKSGSAQSEEFIKTITDIQN----DFSKRLEET--- 112
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDN 190
K+ +A + W D ++N + E EI E IR +L + PD
Sbjct: 113 ----KKEVATKI-WIDSLRNK--GEISVTEDEIK----DYHKKYSYEMTIRQMLLTDPDT 161
Query: 191 KLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSI-GKAQYLLESDLHPQFQNL 249
+ R A + R + ++++ + DVS GK + + P+ +N
Sbjct: 162 -----ANLVLRELKATNNSNREKRFIELAKRYSIDLDDVSTDGKQFTFMPGEFLPEIENA 216
Query: 250 -LKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKA---YLSAQNTPTKIEKHEAEYV 305
S + T +G I ++ + + A L + +E +Y
Sbjct: 217 SANSSSGLVQGFFKTSRGFHIIYKAGEKKITLKDARDRIKNILEKKKFDDYLESLAVKYK 276
Query: 306 KKLRSN 311
++
Sbjct: 277 VEVYKT 282
>gi|150011025|gb|ABR57169.1| trigger factor [Staphylococcus xylosus]
Length = 436
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVET-------LKKQEIEKSG-ITFDSNTVNYFFVQ 108
+ + L +I+G+ E +++ + L I + + + ++ +
Sbjct: 326 QQGLNLETYFQISGQDESQLREQMKDDAEERVKTNLTLTAIADAEEVEVSDDDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
+ +S ED L I K + IQ + +V ++ + E
Sbjct: 386 MSGQFNISVEDIKQTLGNTDI----VKNDVRIQKVIDLLVDEAKFVEPSKDDSEA 436
>gi|308389331|gb|ADO31651.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis alpha710]
gi|325136276|gb|EGC58884.1| hypothetical protein NMBM0579_1013 [Neisseria meningitidis M0579]
gi|325208178|gb|ADZ03630.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 512
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ I +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAIQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
G Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGGPSRDAVFQSLLQRAYLKQGAKLLGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|316934563|ref|YP_004109545.1| hypothetical protein Rpdx1_3233 [Rhodopseudomonas palustris DX-1]
gi|315602277|gb|ADU44812.1| hypothetical protein Rpdx1_3233 [Rhodopseudomonas palustris DX-1]
Length = 883
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 30/197 (15%)
Query: 55 DISKRIALLK---LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
DI + AL + ++ E A E I + +K ++GI D ++ ++
Sbjct: 182 DIEQLEALHRDALTEQPKPEPSTQARTEDIEKQIKSVTDREAGIRADIAEIDKTIQRYTA 241
Query: 112 NTGLSAEDFSSFLDKQ-------GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIP 164
++AE+F L G+G + ++ Q + F+ + E EIP
Sbjct: 242 --DMNAEEFG--LKAAPNNSGRPGVGPRY--EFAKKQ-------RQAFLAQRAEREAEIP 288
Query: 165 ANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFAS 224
+ ++ + I D + A+ + R+ L++F
Sbjct: 289 QLHARRDDLRAVQAKIT------ADALAAREQERAAIKARADALQQRIDVARADLKQF-E 341
Query: 225 KIHDVSIGKAQYLLESD 241
S+ + + +D
Sbjct: 342 TDKAASVADFRKKVMAD 358
>gi|319941329|ref|ZP_08015660.1| hypothetical protein HMPREF9464_00879 [Sutterella wadsworthensis
3_1_45B]
gi|319805250|gb|EFW02073.1| hypothetical protein HMPREF9464_00879 [Sutterella wadsworthensis
3_1_45B]
Length = 268
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 78/250 (31%), Gaps = 41/250 (16%)
Query: 34 KSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKS 93
AM+ T+NG+++T G + + N I + +++ IE
Sbjct: 16 SGAAMAEFKDFTVNGDLVTKGQ--QEAVATEAISNNPNPHAAIANPQIEDQVRQMVIEY- 72
Query: 94 GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYL--AIQSIWPDVVKND 151
Q+A+ GL + K + + N+
Sbjct: 73 ----------KVMSQYAKKEGLDKQQ-------------AVKDDIERMTDMVLMKHAVNE 109
Query: 152 FMLKYGNLEMEIPANKQKMKNITV-REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
++ K E E+ QK + EY +R +L D Q + + K A +++
Sbjct: 110 YVKKNPVTEKELKDEYQKESDRWGKTEYRVRHILVKTQDEAKQ---IIDQINKGASFAKI 166
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQN-LLKKSQNNTTN-PYVTQKGVE 268
K ++ K I D + S Q + ++ + P + G
Sbjct: 167 AAEKSLDEESKDRGGILD-------WTSASVFTGQLSSAIMGLKKGEMDKVPVQSPAGFH 219
Query: 269 YIAICDKRDL 278
+ + D R
Sbjct: 220 VVKVEDVRPA 229
>gi|195564747|ref|XP_002105975.1| GD16383 [Drosophila simulans]
gi|194203340|gb|EDX16916.1| GD16383 [Drosophila simulans]
Length = 790
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 42/227 (18%)
Query: 83 ETLKKQEIEKS--------GITFDSNTVNYFFVQH-ARNTGLSAEDFSSFLDKQGIGDNH 133
+ ++ Q E+ + + + + A S F G+
Sbjct: 439 DQVQLQAAERRLIVLGALEDVKAEKTDLPPAVTRLGAAEYAGSQGRLPEFCATNGLRQKA 498
Query: 134 FKQ--YLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ L +Q N+ L ++E+ + + + R +R +L + ++
Sbjct: 499 MSEVRKLRVQLT------NEINLNVSDVELGVDPELKPPTDAQAR--FLRQILLAGMGDR 550
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF---QN 248
+ + + E RL+ +C +E+ A + P++ Q
Sbjct: 551 VARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVLR--------QKAPEWVIYQE 602
Query: 249 LLKKSQNNTTNPYVTQKGVEYIA----------ICDKRDLGGEIALK 285
+ ++T ++ +G+ I +C+ R++ + A +
Sbjct: 603 AYELQNGDSTKMFI--RGITAIEPEWLLLYVPLLCNIREVREDPAPR 647
>gi|188578367|ref|YP_001915296.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188522819|gb|ACD60764.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 675
Score = 36.6 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 342 GADFAALAKANSQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGDVVGPIKSEFGYHV 401
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + + +++ +
Sbjct: 402 IQLREVKGGQGKSFEQ--VRDKLAAEQLKADADK 433
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ + Q N + + +L+ E + + E +GI +V +
Sbjct: 100 QARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDASVRDYIAN 159
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 160 IQAFQVDGKFSPDKYRAALAQ-GTPPRT 186
>gi|58580660|ref|YP_199676.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58425254|gb|AAW74291.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 675
Score = 36.6 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 342 GADFAALAKANSQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGDVVGPIKSEFGYHV 401
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + + +++ +
Sbjct: 402 IQLREVKGGQGKSFEQ--VRDKLAAEQLKADADK 433
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ + Q N + + +L+ E + + E +GI +V +
Sbjct: 100 QARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDASVRDYIAN 159
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 160 IQAFQVDGKFSPDKYRAALAQ-GTPPRT 186
>gi|1314566|gb|AAC44059.1| unknown [Sphingomonas sp. S88]
Length = 300
Score = 36.6 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 85/280 (30%), Gaps = 52/280 (18%)
Query: 41 RIRTTINGEVITDGDISKRIALLKLQKINGE--LEKIAVQELIVETLKKQEIEKSGITFD 98
++ +++G+ IT +++ + ++ + E++A+Q +I + + + +
Sbjct: 31 QVVASVDGDEITIFELNAEVQATQVPQGTDRKLAEQMALQRIIERKILAKYAREQKLDKT 90
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
+ E + L + +A
Sbjct: 91 PV--------FLIQQRRADELILTTL---------LRDKIAGGIA-------------QP 120
Query: 159 LEMEIPANKQKMKNITVRE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDC 216
+ EI + + + Y I ++F P + + + F + D ++L
Sbjct: 121 TDAEIAQYEAAHPDRFAQRKIYSIEQIVFPPPGSAAKFKEFAPLKTLDQLAAKL-----T 175
Query: 217 NKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICD-- 274
+F L + L P+ + TQ+GV I
Sbjct: 176 ADGVQFR--------RAPTQLDTAALPPEIAAKIAALPAQELFILPTQQGVTANVITGTT 227
Query: 275 KRDLGGEIALKA---YLSAQNTPTKIEKHEAEYVKKLRSN 311
+ L G+ A + L + + + +KK R +
Sbjct: 228 IQPLAGDQARELALNTLRTERFSKAADAQLNDRLKKARES 267
>gi|225868897|ref|YP_002744845.1| foldase protein PrsA precursor [Streptococcus equi subsp.
zooepidemicus]
gi|259534750|sp|C0MCT3|PRSA_STRS7 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|225702173|emb|CAW99882.1| foldase protein PrsA precursor [Streptococcus equi subsp.
zooepidemicus]
Length = 333
Score = 36.6 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 59/196 (30%), Gaps = 25/196 (12%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ G + + A G S FS+ L + G+ + +K+ + + +
Sbjct: 71 QYGKKVSKKKTEEAYNKSAEQYGAS---FSAALAQSGLTTDTYKRQIRSAML------VE 121
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ +K + A+ +K E + + L N+ + + + +
Sbjct: 122 YAVKEAAKKELTDADYKKAYESYTPEMTTQVI-------TLDNEETAKAILGEVKAEGAD 174
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT------NPYVTQK 265
+ A K D L +D+ + + + + +P Q
Sbjct: 175 FAAIAKEKTTAADKKVDYKFDSGDTKLPADV---IKAASGLKEGDISEVVSVLDPATYQN 231
Query: 266 GVEYIAICDKRDLGGE 281
+ + K + +
Sbjct: 232 KFYIVKVTKKAEKASD 247
>gi|325981959|ref|YP_004294361.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Nitrosomonas sp.
AL212]
gi|325531478|gb|ADZ26199.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Nitrosomonas sp.
AL212]
Length = 322
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 74/228 (32%), Gaps = 26/228 (11%)
Query: 115 LSAEDFSSFLDKQGIGDNHF---KQYLAIQSIWPDV-VKNDFMLKYGNLEMEIPANKQKM 170
++ + + + I + + ++ L I + V K + A ++
Sbjct: 46 ITMLQLNDEIRRSNIRADQYESAREQLLESLIARQLIVDEAIRNKLDRTPEVMQARERAN 105
Query: 171 KNITVREYLIRTVLFSIPDNKL-------QNQGFVQKRIK-DAEESRLRLPKDCNKLEKF 222
+ + YL + +K +N +R + D R+ +L++
Sbjct: 106 AQVIAQAYLQGIISKIEKPSKAEIEDYFQKNPELFAQRKQFDLTTVRIATSDVSEELKRV 165
Query: 223 ---ASKIHDVSI----------GKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEY 269
A I +V +DL Q +L++ +T Q+
Sbjct: 166 IDAAKSIEEVVTWLDKNKIQYFRTLATRSSADLPLQLVLMLREKSKDTIYIINEQEKSIL 225
Query: 270 IAICDKRDLG-GEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I++ ++ E A + K ++ + +LR++A I Y
Sbjct: 226 ISVNAIKNNSVSETAAAPQIERFLINQKYKEATDAEITRLRTSAKIEY 273
>gi|191639211|ref|YP_001988377.1| peptidylprolyl isomerase [Lactobacillus casei BL23]
gi|190713513|emb|CAQ67519.1| Foldase protein prsA precursor (Protease maturation protein prtM)
[Lactobacillus casei BL23]
gi|327383289|gb|AEA54765.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei LC2W]
gi|327386472|gb|AEA57946.1| Peptidyl-prolyl cis-trans isomerase [Lactobacillus casei BD-II]
Length = 299
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + + ++S + + T +G +T+ + K K + +
Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQADQTVATYSGGKVTES------SFYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + ++ TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVNTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLA 139
FK+ L
Sbjct: 111 FKESLR 116
>gi|325290596|ref|YP_004266777.1| Trigger factor [Syntrophobotulus glycolicus DSM 8271]
gi|324965997|gb|ADY56776.1| Trigger factor [Syntrophobotulus glycolicus DSM 8271]
Length = 445
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 1/104 (0%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ AV+ + E + + +K GIT + + + G E+ + L
Sbjct: 343 QLKESYRPQAVEGIKTELVLETISKKEGITVSDEEMQAEMTRLSEQYGRKVEELQTMLAA 402
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKM 170
+G + FK + +V N+ + + +
Sbjct: 403 RG-ELDWFKLGMISDKTIDFLVANNDFQEGSAGQKQEANEVNGE 445
>gi|261392500|emb|CAX50051.1| putative peptidyl-prolyl cis-trans isomerase D (PPIase D; rotamase
D) [Neisseria meningitidis 8013]
Length = 512
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ + +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
Q L+ KQ + GI+ S + V H N
Sbjct: 60 QAGGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|195977800|ref|YP_002123044.1| foldase protein PrsA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|226712006|sp|B4U214|PRSA_STREM RecName: Full=Foldase protein prsA; Flags: Precursor
gi|195974505|gb|ACG62031.1| foldase protein PrsA precursor [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 333
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 59/196 (30%), Gaps = 25/196 (12%)
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKND 151
+ G + + A G S FS+ L + G+ + +K+ + + +
Sbjct: 71 QYGKKVSKKKTEEAYNKSAEQYGAS---FSAALAQSGLTTDTYKRQIRSAML------VE 121
Query: 152 FMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ +K + A+ +K E + + L N+ + + + +
Sbjct: 122 YAVKEAAKKELTDADYKKAYESYTPEMTTQVI-------TLDNEETAKAILGEVKAEGAD 174
Query: 212 LPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT------NPYVTQK 265
+ A K D L +D+ + + + + +P Q
Sbjct: 175 FAAIAKEKTTAADKKVDYKFDSGDTKLPADV---IKAASGLKEGDISEVVSVLDPATYQN 231
Query: 266 GVEYIAICDKRDLGGE 281
+ + K + +
Sbjct: 232 KFYIVKVTKKAEKASD 247
>gi|167765434|ref|ZP_02437547.1| hypothetical protein BACSTE_03824 [Bacteroides stercoris ATCC
43183]
gi|167697062|gb|EDS13641.1| hypothetical protein BACSTE_03824 [Bacteroides stercoris ATCC
43183]
Length = 518
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 13/164 (7%)
Query: 152 FMLKYGNLEMEIPANKQKMKNIT-VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRL 210
++ +E E KMK + + +P N + D+ L
Sbjct: 101 YLTDTAVIENEARRLYDKMKAGHHAGRVRVSHIFKYLPQNVSGHALRKAVAGMDSIYEYL 160
Query: 211 RLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEY 269
R + + + D + ++ + +F+N+ + S + P+ T +G+
Sbjct: 161 RRNQTPEAFDACVKRFSD--EKQPFWVSWLQMPVEFENVAFELSAGEVSQPFFTPQGIHI 218
Query: 270 IAICDKRDLG--GEI-----ALKAYLSAQN--TPTKIEKHEAEY 304
+ + ++ ++ ++ +AY + ++EK + EY
Sbjct: 219 VKVIERMEMPSFDDVKNGMEVCRAYRHGTDWGVEAQVEKLKKEY 262
>gi|122064921|sp|P0C2B5|PRSA_LACLC RecName: Full=Foldase protein prsA; AltName: Full=Protease
maturation protein prtM; Flags: Precursor
gi|432402|gb|AAA03532.1| maturation protein [Lactococcus lactis]
gi|623055|gb|AAA60395.1| proteinase activation protein [Lactococcus lactis]
Length = 299
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 92/270 (34%), Gaps = 50/270 (18%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K+ + + ++S + + T +G +T+ +L K K + +
Sbjct: 4 KMRLKVLLASTATALLLLSGCQSNQTDQTVATYSGGKVTES------SLYKELKQSPTTK 57
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
+ LI L G + + TVN + + + G E+F +FL + G +
Sbjct: 58 TMLANMLIYRALNHA----YGKSVSTKTVNDAYDSYKQQYG---ENFDAFLSQNGFSRSS 110
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQ 193
FK+ L + +F+ + +K+K ++ + Q
Sbjct: 111 FKESL----------RTNFLSEV---------ALKKLKKVSESQ-------LKAAWKTYQ 144
Query: 194 NQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIH----DVSIGKAQYLLESDLHPQ---- 245
+ VQ + E++ ++ D + FA D + + +L+ +
Sbjct: 145 PKVTVQHILTSDEDTAKQVISDLAAGKDFAMLAKTDSIDTATKDNGGKISFELNNKTLDA 204
Query: 246 -FQN-LLKKSQNNTTN-PYVTQKGVEYIAI 272
F++ K + T P G E I +
Sbjct: 205 TFKDAAYKLKNGDYTQTPVKVTDGYEVIKM 234
>gi|288575825|ref|ZP_05977675.2| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
gi|288566815|gb|EFC88375.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
Length = 298
Score = 36.6 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 23/297 (7%)
Query: 25 FCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV-- 82
F +++ S ++ ++ T+NG+ I I ++A L+ + + QEL
Sbjct: 14 FTAALVMAALSGSLFAQTLVTVNGQAIDSSVIDGQVAALRAENKQIQDSPQLRQELTNRQ 73
Query: 83 --ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
T+ QE ++ + Q + D F+ L
Sbjct: 74 VISTVIAQEAKRRKLDQS-AEFKKALEQARADAKKQGADKKPSFK---TEWAAFEDDLLG 129
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQGFV 198
Q++ DV++ + E EI + + +E +R + + K Q
Sbjct: 130 QALAIDVLRKN-----PVNEQEIKKSYDEFAKFYQGSQEVRLREI---VTRTKADGQKAA 181
Query: 199 QKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTT 258
+ + ++ K A I + L+ P + + + T
Sbjct: 182 ADLKAKKAFTAVLKQYSIDEEAKKAGGIPQAYV--PLKDLQEAAPPLYAAVKDLKKGEAT 239
Query: 259 N-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
+ P + D+RD+ + + + ++ L A I
Sbjct: 240 SEPLQDGNSYAVFYVDDRRDVK--VPAFNEIKGSMARDLSTARIDDTMRALLQKADI 294
>gi|326626340|gb|EGE32684.1| conjugative transfer oriT nicking-unwinding protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 1415
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 18/133 (13%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NGE +T +++R A +++ + V+++ +
Sbjct: 1297 VNGEPVTAEILAQRQAEEAVRRETEQRAAEIVRKMAEDKP----------DLPEEKTAQA 1346
Query: 106 FVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEME 162
+ A ++ + + + ++ ++ + + +V + N + E E
Sbjct: 1347 VREIAGQEQDRMTPPE-----RETPLPESVLREPVRERETIREVARENRVRERLQQTEQE 1401
Query: 163 IPANKQKMKNITV 175
+ + QK +
Sbjct: 1402 MVRDLQKERTPDG 1414
>gi|224824985|ref|ZP_03698091.1| putative peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum
2002]
gi|224602656|gb|EEG08833.1| putative peptidyl-prolyl cis-trans isomerase [Lutiella nitroferrum
2002]
Length = 277
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 72/213 (33%), Gaps = 10/213 (4%)
Query: 6 FTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKL 65
F + F+ + + + F + SY + A+ + I D+ + L+
Sbjct: 4 FVQNNKFVIKVILGAIALTFVGFGVGSYTT-AVDEPYLAKVGNVKIHKQDLDR---ALEG 59
Query: 66 QKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR---NTGLSAEDFSS 122
Q + + ++ LI + L + +G+T + N SAE +
Sbjct: 60 QPADAATRQAVLENLIRQQLLLADAHAAGLTVSDAQLRKAIASIPALQENGAFSAERYKQ 119
Query: 123 FLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
FL + F++ + + + + + + ++ VR +++
Sbjct: 120 FLAGRYQSSVAFEELVKRDILLQGQLTSLLGSQIVPRTVVDRMAGVLGESREVRALVLKP 179
Query: 183 VLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD 215
F+ +++ K DA R R P+
Sbjct: 180 EAFAA---EVKTDAAALKAFYDASLKRFRTPEA 209
>gi|56479244|ref|YP_160833.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum
aromaticum EbN1]
gi|56315287|emb|CAI09932.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Aromatoleum
aromaticum EbN1]
Length = 633
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 18/168 (10%), Positives = 48/168 (28%), Gaps = 5/168 (2%)
Query: 153 MLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+ + E+ + E R +L + + A +++R
Sbjct: 242 QVSVSDDEIRKFYEANTARFGQPEERNARHILIEAAADAPAEEVAKASEKAAALLAQVRA 301
Query: 213 -PKDCNKLEKFASKIHD--VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVE 268
P+ +L K S+ G+ + + F++ + + ++ + G
Sbjct: 302 NPERFAELAKAESQDPGSAARGGELGFFGRGAMVKSFEDAVFSLEKGQISDVVRSDFGFH 361
Query: 269 YIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
I + D + + K + ++ A + Y
Sbjct: 362 IIQVVDIKPAKA-RPFEEVRDEIAEELKRQAASRRLAEQAEHFANLVY 408
>gi|313896904|ref|ZP_07830451.1| sporulation initiation inhibitor protein Soj [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312974351|gb|EFR39819.1| sporulation initiation inhibitor protein Soj [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 192
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 38/109 (34%)
Query: 1 MTSKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI 60
+T T+ + + F + + + S+ T+ G V+T D RI
Sbjct: 70 LTLNALTAAHAVLIPIQCEFYALEGVAQLMNTIGLVQESANPALTVQGVVMTMYDGRTRI 129
Query: 61 ALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH 109
A+ ++++ G + LI ++ E G S + +
Sbjct: 130 AVQVVEEVRGVFGAALYETLIPRNVRLSEAPSFGQPITSYDITSRGAEM 178
>gi|169647072|ref|YP_001716148.1| conjugative transfer oriT nicking-unwinding protein [Salmonella
enterica subsp. enterica serovar Dublin]
gi|169246205|gb|ACA51179.1| conjugative transfer oriT nicking-unwinding protein [Salmonella
enterica subsp. enterica serovar Dublin]
gi|327536841|gb|AEA95672.1| IncF plasmid conjugative transfer DNA-nicking and unwinding protein
TraI [Salmonella enterica subsp. enterica serovar Dublin]
Length = 1415
Score = 36.6 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 18/133 (13%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NGE +T +++R A +++ + V+++ +
Sbjct: 1297 VNGEPVTAEILAQRQAEEAVRRETEQRAAEIVRKMAEDKP----------DLPEEKTAQA 1346
Query: 106 FVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEME 162
+ A ++ + + + ++ ++ + + +V + N + E E
Sbjct: 1347 VREIAGQEQDRMTPPE-----RETPLPESVLREPVRERETIREVARENRVRERLQQTEQE 1401
Query: 163 IPANKQKMKNITV 175
+ + QK +
Sbjct: 1402 MVRDLQKERTPDG 1414
>gi|198241643|ref|YP_002213911.1| conjugative transfer relaxase protein TraI [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|197936159|gb|ACH73493.1| conjugative transfer relaxase protein TraI [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|326621652|gb|EGE27998.1| conjugative transfer relaxase protein TraI [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 1428
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 45/133 (33%), Gaps = 18/133 (13%)
Query: 46 INGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYF 105
+NGE +T +++R A +++ + V+++ +
Sbjct: 1310 VNGEPVTAEILAQRQAEEAVRRETEQRAAEIVRKMAEDKP----------DLPEEKTAQA 1359
Query: 106 FVQHAR--NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK-NDFMLKYGNLEME 162
+ A ++ + + + ++ ++ + + +V + N + E E
Sbjct: 1360 VREIAGQEQDRMTPPE-----RETPLPESVLREPVRERETIREVARENRVRERLQQTEQE 1414
Query: 163 IPANKQKMKNITV 175
+ + QK +
Sbjct: 1415 MVRDLQKERTPDG 1427
>gi|114776940|ref|ZP_01451983.1| peptidyl-prolyl cis-trans isomerase C [Mariprofundus ferrooxydans
PV-1]
gi|114553026|gb|EAU55457.1| peptidyl-prolyl cis-trans isomerase C [Mariprofundus ferrooxydans
PV-1]
Length = 100
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVS-IGKAQYLLESDLHPQFQNLLKKSQNNTT-NPY 261
+A ++ + D +L + S S G E + +F +++ ++ +T P
Sbjct: 25 EALKAEIEAGADFAELARKHSTCPSASKGGDLGEFRERQMVKEFNDVVFSAELHTVHGPV 84
Query: 262 VTQKGVEYIAICDK 275
TQ G I I +
Sbjct: 85 KTQFGYHLIEITAR 98
>gi|84622593|ref|YP_449965.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84366533|dbj|BAE67691.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 656
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 213 PKDCNKLEKFASKIHDV--SIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEY 269
D L K S+ + G ++ + + F++ L + P ++ G
Sbjct: 323 GADFAALAKANSQDPGSKDAGGDLGWVEKGTMVKPFEDALFSMKAGDVVGPIKSEFGYHV 382
Query: 270 IAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
I + + + G+ + + + +++ +
Sbjct: 383 IQLREVKGGQGKSFEQ--VRDKLAAEQLKADADK 414
Score = 35.8 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 12/88 (13%)
Query: 57 SKRIALLKLQKINGELEK--------IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
R+ + Q N + + +L+ E + + E +GI +V +
Sbjct: 81 QARMQERQRQGENFDPRTFESRENKLQVLDQLVDEQVVRLGAEDAGIVIGDASVRDYIAN 140
Query: 109 HAR---NTGLSAEDFSSFLDKQGIGDNH 133
+ S + + + L + G
Sbjct: 141 IQAFQVDGKFSPDKYRAALAQ-GTPPRT 167
>gi|164425050|ref|XP_957324.2| hypothetical protein NCU06433 [Neurospora crassa OR74A]
gi|157070769|gb|EAA28088.2| predicted protein [Neurospora crassa OR74A]
Length = 131
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 202 IKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNP 260
K+ +++R D + + S+ + G + + L P+F+ + ++T++P
Sbjct: 51 KKEEALAKIRDGADFGAVAREYSEDKARTGGSLGWKQKGTLDPEFEKVAFALETSSTSSP 110
Query: 261 Y----VTQKGVEYIAI 272
TQ G I +
Sbjct: 111 KIGEVKTQFGYHIIMV 126
>gi|85712920|ref|ZP_01043960.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
baltica OS145]
gi|85693226|gb|EAQ31184.1| Periplasmic parvulin-like peptidyl-prolyl isomerase [Idiomarina
baltica OS145]
Length = 624
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 48/393 (12%), Positives = 116/393 (29%), Gaps = 104/393 (26%)
Query: 3 SKVFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISK---- 58
S+ FT+ + + ++ T+ + + V + + A +N I+ + +
Sbjct: 9 SQSFTAKAVLVLIILTFALAGVGSYVTGGATTTVAE-------VNDAEISQQALERAYEN 61
Query: 59 -RIALLK--------LQKING---ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFF 106
R L + + G + +++LI + L Q G+ + V
Sbjct: 62 ERNRLQEQFGDMFEAVSSQPGYMQSVRANVLEQLIQQELLVQYARDHGMRVSAARVKQEI 121
Query: 107 VQ----------------HARNT-GLSAEDFSSFLD--------KQGIGDNHFK------ 135
A G + E F++ L Q IG F
Sbjct: 122 RDIPAFRSAGQFDNDIYLMALRNAGYTPEQFATVLRDDLIRSQIAQAIGATEFALPAEAL 181
Query: 136 --QYLAIQSIWPDVV---KNDFMLKYGNLEMEIPA--NKQKMKNITVREYLIRTVLFSIP 188
Q L Q+ + +F+ + + +I N+ + + T + + V S
Sbjct: 182 ALQRLQKQTRSGAYIIAENANFVDQVELSDSDIENYYNENQQQFQTPEQLKVAFVQLSKA 241
Query: 189 D----NKLQNQGFVQKRIKDAEESR-------------LRLPKDCNKLEKFASKIHDVS- 230
+ K+ + ++ R K ++ ++++D +
Sbjct: 242 ELYNDVKVSDDEVKAYYQGSIDQYRTDEERRVAHILIESDSDNAQEKAQEALAQLNDGAD 301
Query: 231 -----------------IGKAQYLLESDLHPQFQNLLKKSQ--NNTTNPYVTQKGVEYIA 271
G ++ + + F N + + ++ T G I
Sbjct: 302 FAAIAKEYSDDTFSAEQGGDLDWITKGSMDEDFDNAAFALENVGDVSDIVETSFGYHIIK 361
Query: 272 ICDKRDLGG----EIALKAYLSAQNTPTKIEKH 300
+ D R ++A + + + +++
Sbjct: 362 LLDVRPGEVTPFEDVAGE--IRQKLKAQQVDDK 392
>gi|289167826|ref|YP_003446095.1| peptidylprolyl isomerase [Streptococcus mitis B6]
gi|288907393|emb|CBJ22230.1| peptidylprolyl isomerase [Streptococcus mitis B6]
Length = 312
Score = 36.6 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 68/214 (31%), Gaps = 27/214 (12%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------SN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D VN + + G E++ L + G+
Sbjct: 51 PSAQQVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY--LIRTVLFSIPDNK 191
K + +++ + EY + + + +
Sbjct: 108 RKAQIRTS----------KLVELAVKKAAEAELTDDAYKKAFDEYTPDVTAQIIRLDNED 157
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASK 225
+ + + DA+ ++L ++ K
Sbjct: 158 KAKEILEKAKASDADFAQLAKDNSTDEKTKANGG 191
>gi|242373967|ref|ZP_04819541.1| trigger factor [Staphylococcus epidermidis M23864:W1]
gi|242348321|gb|EES39923.1| trigger factor [Staphylococcus epidermidis M23864:W1]
Length = 433
Score = 36.6 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 44 TTIN---GEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVET-------LKKQEI 90
+N +I + + L LQ +I+G+ E+ +++ + L I
Sbjct: 307 AMVNTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEEQLREQMKDDAEQRVKTNLTLTAI 366
Query: 91 EKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ + ++ + + +S ED S L I N +
Sbjct: 367 ADAENVEVSDEDIDKELEKMSEQFNISVEDIKSTLGNTDIVKNDVR 412
>gi|314936220|ref|ZP_07843567.1| trigger factor [Staphylococcus hominis subsp. hominis C80]
gi|313654839|gb|EFS18584.1| trigger factor [Staphylococcus hominis subsp. hominis C80]
Length = 438
Score = 36.6 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQE--------IEKSGITFDSNTVNYFFVQ 108
+ + L +I+G+ E +++ + ++ + ++ I ++ +
Sbjct: 326 QQGLDLQTYFQISGQDESQLREQMKDDAEQRVKTNLTLSAIADEENIEVTDEDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +S ED L I N +
Sbjct: 386 MSSQFNISVEDIKQTLGNTDIIKNDVR 412
>gi|257452230|ref|ZP_05617529.1| trigger factor, PPIase [Fusobacterium sp. 3_1_5R]
gi|257465975|ref|ZP_05630286.1| trigger factor, PPIase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917131|ref|ZP_07913371.1| trigger factor [Fusobacterium gonidiaformans ATCC 25563]
gi|313691006|gb|EFS27841.1| trigger factor [Fusobacterium gonidiaformans ATCC 25563]
Length = 429
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Query: 81 IVETLKKQEIEK-SGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L EI + I V + A+ G+ L + FK +
Sbjct: 354 IKSDLVLAEIARNEKIEATDEDVTEKMAEVAKMYGMEVAKMEEELKAHN-QLDAFKYSVR 412
Query: 140 IQSIWPDVV 148
+ + +
Sbjct: 413 AEIVMKKTI 421
>gi|219871319|ref|YP_002475694.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis SH0165]
gi|219691523|gb|ACL32746.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis SH0165]
Length = 624
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 65/218 (29%), Gaps = 26/218 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------------- 60
+ F L+ V + +NGE I+ + R
Sbjct: 13 VFKIIFALVSLSFVLGGIGGGLIATDNSVAKVNGEEISQ-QVFSRAKNQQQNILNAQLGE 71
Query: 61 ALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG 114
L +++ + L+ + L +Q + I ++ + V ++
Sbjct: 72 RFWDLMDNPIYVKQFHESILNGLVDDELLRQYAKSLKIDVSADQIKSEIVNSPAFQQDGK 131
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ + L G+ + + + ++ + N +PA ++ + +
Sbjct: 132 FNNNLYQQALRNNGLTADGYAAIVYEGMLFAQI-----QEAIVNSSFTVPAQQELLAKLL 186
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRL 212
+++ +R +SI ++ E ++
Sbjct: 187 LQKRQVRLATYSIAKEVNNQTASAEEMQAYYEANKANF 224
>gi|167383933|ref|XP_001736743.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting [Entamoeba
dispar SAW760]
gi|165900781|gb|EDR27021.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting, putative
[Entamoeba dispar SAW760]
Length = 120
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
++L K +++ S+ G +++ + FQ++ T P+ T G
Sbjct: 51 AKLEEGKPFSQVATEYSEDKANQGGSLGWVIRGQMCGAFQDVAFNAPVGKYTQPFKTPFG 110
Query: 267 VEYIAICDKR 276
+ + +++
Sbjct: 111 YHIVLVEERK 120
>gi|67484012|ref|XP_657226.1| peptidyl-prolyl cis-trans isomerase [Entamoeba histolytica
HM-1:IMSS]
gi|56474474|gb|EAL51841.1| peptidyl-prolyl cis-trans isomerase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 120
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 208 SRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKG 266
++L K +++ S+ G +++ + FQ++ T P+ T G
Sbjct: 51 AKLEEGKPFSQVATEYSEDKANQGGSLGWVIRGQMCGAFQDVAFNAPVGKYTQPFKTPFG 110
Query: 267 VEYIAICDKR 276
+ + +++
Sbjct: 111 YHIVLVEERK 120
>gi|261401822|ref|ZP_05987947.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
gi|269208029|gb|EEZ74484.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
Length = 288
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 86/300 (28%), Gaps = 25/300 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE----LEKIAV 77
I V +++ + + T+NG+ I I ++A + + + E L + +
Sbjct: 3 AKILTSVALLACSGSLFAQTL-ATVNGQKIDSSVIDAQVAAFRAENSSAEDSPQLRRALL 61
Query: 78 QELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
+ I T+ QE+++ + + S +D Q
Sbjct: 62 NQEITHTVVAQEVKRLKLDRS-AEFKDMLAKLRAEAEKSGDDKKP-------SFKTVWQA 113
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
+ E + A ++ +E + +L +
Sbjct: 114 VEYGLN-GRAYALHIAKTQPVSEQDAKAAYDNIRGFYKGTQEVQLGEIL--TDKEDNAKK 170
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ K ++ L+ + ++ V + E + P +Q + +
Sbjct: 171 AVAGLKAKKGFDAVLKQYSLNDHTKQTGKPDGYVPLKDL----EQGVPPLYQAIKDLKKG 226
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P + D+R++ + + Q T + V L A I
Sbjct: 227 EFTATPLKNGDFYGVYYVNDRREVK--VPSFDEMKEQLTGDLQAERIDRAVGALLGKADI 284
>gi|119961627|ref|YP_948117.1| trigger factor [Arthrobacter aurescens TC1]
gi|166229012|sp|A1R7A5|TIG_ARTAT RecName: Full=Trigger factor; Short=TF
gi|119948486|gb|ABM07397.1| trigger factor [Arthrobacter aurescens TC1]
Length = 460
Score = 36.6 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ E+ E+I++ + +K + N + + V A G+ F+ +D+
Sbjct: 332 EVKANTERAFQNEIILDAI----ADKEEVDVSQNELIDYIVTTASQYGMDPNQFAQIIDQ 387
Query: 127 QG 128
G
Sbjct: 388 SG 389
>gi|229819512|ref|YP_002881038.1| hypothetical protein Bcav_1015 [Beutenbergia cavernae DSM 12333]
gi|229565425|gb|ACQ79276.1| hypothetical protein Bcav_1015 [Beutenbergia cavernae DSM 12333]
Length = 187
Score = 36.6 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 29/100 (29%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQ 78
++ + + A T++ IT+ ++ + + + +
Sbjct: 10 TLGIVAVALTLGSAVVGCAQRPGTAATVDDWRITESYLADTVREIAPLSAEPPTAQGTLS 69
Query: 79 ELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAE 118
LI + E +G + F A G+ +
Sbjct: 70 SLISAPSYLEVAEDNGAGVSTQEAETFLASIAEQVGIDPD 109
>gi|86131509|ref|ZP_01050107.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134]
gi|85817954|gb|EAQ39122.1| peptidylprolyl isomerase [Dokdonia donghaensis MED134]
Length = 713
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 39/153 (25%), Gaps = 7/153 (4%)
Query: 163 IPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKF 222
+ ++ T R + + I N + + K L +
Sbjct: 561 VAQVTRRTPAGTERVEDVSLQVTPIIRNMKKAEIIKNKISG------STLSEIAQSQGTT 614
Query: 223 ASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
VS+ + + ++P +GV I + + G +
Sbjct: 615 VKTAGAVSMNAPTIAGAGNEPKVVGAAFGLKEGEVSSPIEGSRGVYVIEVVKVSEAPG-L 673
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
A + Q + + L+ A I
Sbjct: 674 ENYAAFAGQQAQKSRAAVSTKVLNALKEAADIE 706
>gi|319939473|ref|ZP_08013833.1| foldase prsA [Streptococcus anginosus 1_2_62CV]
gi|319811459|gb|EFW07754.1| foldase prsA [Streptococcus anginosus 1_2_62CV]
Length = 312
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 68/207 (32%), Gaps = 22/207 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSS-RIRTTINGEVITDGDISKRIALLKLQKINGELEK 74
+ + ++ +V+ + + + + T+ G IT D K N ++
Sbjct: 1 MKKKILAGAITLLSVVTLAACSQAGGKDIITMKGNTITVND------FYNKVKNNAAAQQ 54
Query: 75 IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHF 134
+ + I E + + G V F + G F L + G+ ++ +
Sbjct: 55 VLLNMTIQEVFE----KSYGKHVTEKEVTETFNKSKSTYG---TAFQQVLARAGLTEDTY 107
Query: 135 KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
++ + +V ++ +K + AN +K E + + +
Sbjct: 108 REQIRT----NKLV--EYAVKKAAEKELTDANYKKAYESYTPEVTAQII--KVDSQDKAK 159
Query: 195 QGFVQKRIKDAEESRLRLPKDCNKLEK 221
+ + + + A+ ++ + K
Sbjct: 160 EVLEKAKAEGADFGQIAKENSTDTKTK 186
>gi|302528640|ref|ZP_07280982.1| transcriptional regulator [Streptomyces sp. AA4]
gi|302437535|gb|EFL09351.1| transcriptional regulator [Streptomyces sp. AA4]
Length = 332
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 28/96 (29%), Gaps = 8/96 (8%)
Query: 103 NYFFVQHARNTGLSAEDFSSFLDKQ-GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEM 161
++ A +S + ++ G+ + + ++ +L+ + +
Sbjct: 243 DHTLSGMAARARVSVRQLTRLFQQELGVTPGQYVARIRVE-------AARVLLESCDAGV 295
Query: 162 EIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGF 197
E A + + L VL P Q
Sbjct: 296 ETVARRCGFGSAESMRRLFVQVLGITPTAYRQRFAH 331
>gi|190573026|ref|YP_001970871.1| putative peptidyl-prolyl cis-trans isomerase [Stenotrophomonas
maltophilia K279a]
gi|190010948|emb|CAQ44557.1| putative peptidyl-prolyl cis-trans isomerase [Stenotrophomonas
maltophilia K279a]
Length = 651
Score = 36.6 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G ++ + F++ L + P T+ G I + R G+ + +
Sbjct: 337 GGDLGWVERGAMVKPFEDALFAAKAGDVIGPVKTEFGYHIIKVAAVRGGQGKSFEE--VR 394
Query: 290 AQNTPTKIEKHEAEYVKKL 308
+++ +L
Sbjct: 395 DTLAAEQLKADGERGFNEL 413
>gi|294057979|ref|YP_003550323.1| conjugative transfer protein TraA [Sphingobium japonicum UT26S]
gi|292677710|dbj|BAI99224.1| conjugative transfer protein TraA [Sphingobium japonicum UT26S]
Length = 407
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 16/183 (8%), Positives = 54/183 (29%), Gaps = 16/183 (8%)
Query: 83 ETLKKQEIEKSGIT--------FDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG--IGDN 132
+ + + ++ GI + + Q A G + E ++ +
Sbjct: 189 DRVDHRSHQRQGIEQEPTVHMGPSATAMERRAEQVAAREGRAYEPVTAVGQHNAGVVERA 248
Query: 133 HFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKL 192
+QY+ + W + + ++ + ++ + L R + ++
Sbjct: 249 GLRQYIERGTEWLRDMGQRIAGRLHDVAASLSGAVERDRREAAEVQLAREAQERLAADRA 308
Query: 193 QNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK 252
+ + ++++++ E + K E A D + + + +
Sbjct: 309 RQEAQERQQVRERERVAEKFNTIAGKREAGAHGYGD---HNSDWKAT---PEALRKAVDA 362
Query: 253 SQN 255
Sbjct: 363 YNG 365
>gi|241764579|ref|ZP_04762596.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax
delafieldii 2AN]
gi|241365982|gb|EER60603.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax
delafieldii 2AN]
Length = 309
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 179 LIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKD-----CNKLEKFASKIHDVSIGK 233
+R VLF++ Q + +A LR D ++++ G
Sbjct: 154 QLRHVLFAVTPGVDVKQLRL---RAEAMLLDLRCADDGGVRFAEAAAQWSNCPSGQQGGD 210
Query: 234 AQYLLESDLHPQF-QNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQ 291
+L +D P+F + + ++ + ++ G+ + + + E L+
Sbjct: 211 LGWLSRADCAPEFAREVFGSAEIGVLSRLVHSRFGLHVVEVVAR-----EAGLQPSFEEV 265
Query: 292 NTPTKIEKHEAEYVKKLRS 310
+ + +V LR
Sbjct: 266 RKAIGLTLRQQAWVNALRQ 284
>gi|228475191|ref|ZP_04059917.1| trigger factor [Staphylococcus hominis SK119]
gi|228270802|gb|EEK12204.1| trigger factor [Staphylococcus hominis SK119]
Length = 438
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQE--------IEKSGITFDSNTVNYFFVQ 108
+ + L +I+G+ E +++ + ++ + ++ I ++ +
Sbjct: 326 QQGLDLQTYFQISGQDESQLREQMKDDAEQRVKTNLTLSAIADEENIEVTDEDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +S ED L I N +
Sbjct: 386 MSSQFNISVEDIKQTLGNTDIIKNDVR 412
>gi|254521282|ref|ZP_05133337.1| peptidylprolyl isomerase [Stenotrophomonas sp. SKA14]
gi|219718873|gb|EED37398.1| peptidylprolyl isomerase [Stenotrophomonas sp. SKA14]
Length = 651
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 24/81 (29%), Gaps = 3/81 (3%)
Query: 229 VSIGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY 287
G ++ + F++ L + P T G I + R G+ +
Sbjct: 335 AQGGDLGWVERGAMVKPFEDALFAAKAGDVIGPVKTDFGYHIIKVAAVRGGQGKSFEE-- 392
Query: 288 LSAQNTPTKIEKHEAEYVKKL 308
+ +++ +L
Sbjct: 393 VRDTLAAEQLKADGERGFNEL 413
>gi|145484021|ref|XP_001428033.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395116|emb|CAK60635.1| unnamed protein product [Paramecium tetraurelia]
Length = 115
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 13/109 (11%)
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRI--------KDAEESRLRLPKDCNKLEKFASKI 226
+ +L ++ F K+I K E R ++ + N K A +
Sbjct: 3 GKSVRASHILLKSTQSRNPYDRFRDKQITRSDADAEKGIREIRAQVENNLNLFAKIAQER 62
Query: 227 HDVS----IGKAQYLLESDLHPQFQNL-LKKSQNNTTNPYVTQKGVEYI 270
+ S G + QF+++ + P + G I
Sbjct: 63 SECSSCQKGGDLGDFTRGQMQKQFEDVAFALKVGELSQPVKSDSGWHII 111
>gi|186683673|ref|YP_001866869.1| hypothetical protein Npun_F3522 [Nostoc punctiforme PCC 73102]
gi|186466125|gb|ACC81926.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length = 260
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 22/238 (9%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH-ARNTGLSAEDFSSFLD 125
+I LE IA +++I QE +K+GI + N L AED ++L+
Sbjct: 21 QIPNILESIATRKIIE-----QEAKKAGIQIGLEELQRAADSLRLANQLLKAEDTWAWLE 75
Query: 126 KQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLF 185
K + + F+ + + + F K E ++ I Y +
Sbjct: 76 KYHLSLDDFEAIAENNLLSAKLANHLFADKA-----EQFFYAHQLDYIAAVTYEV----- 125
Query: 186 SIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQ 245
+ D L + F + + ++ N + A + +
Sbjct: 126 VLDDEDLALELFYALQEGEISFQQIARQYIQNTEIRRAGGYQGIRLRTDFR------PEI 179
Query: 246 FQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAE 303
+ + P T KGV IA+ + + + + ++ A
Sbjct: 180 AAAIFAANPPQILKPITTPKGVHIIAVEEIIKPQLDEQRRLKIIGDLFTNWLKSQTAA 237
>gi|116625220|ref|YP_827376.1| DSBA oxidoreductase [Candidatus Solibacter usitatus Ellin6076]
gi|116228382|gb|ABJ87091.1| DSBA oxidoreductase [Candidatus Solibacter usitatus Ellin6076]
Length = 344
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI--ALLKLQKINGELE 73
L+ +L+ S S + I+G +T D+ +++ LL+ + + E
Sbjct: 7 LSLIPLLVCALSTARASDTGTPSGSTVVVDIDGVKLTADDVEQKLPGRLLQARATYYQTE 66
Query: 74 KIAVQELIVETLKKQEIEKSGITFD---SNTVNYFFVQ 108
+ V E I L + + +T D VN +
Sbjct: 67 RKTVDEFIETYLLDRAAKAENLTVDALLERHVNSAIAK 104
>gi|255084659|ref|XP_002508904.1| predicted protein [Micromonas sp. RCC299]
gi|226524181|gb|ACO70162.1| predicted protein [Micromonas sp. RCC299]
Length = 116
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVS----IGKAQYLLESDLH 243
P+ + + + + E R ++ A+K+ D S G + +
Sbjct: 25 PEGAVITKRSKAAALDELEAYREQIESGAVTFADLAAKVSDCSSAKHGGDLGFFGPGKMQ 84
Query: 244 PQFQN-LLKKSQNNTTNPYVTQKGVEYI 270
F++ + + GV I
Sbjct: 85 KAFEDGAFALQVGEMSGVIDSDSGVHII 112
>gi|225389282|ref|ZP_03759006.1| hypothetical protein CLOSTASPAR_03028 [Clostridium asparagiforme
DSM 15981]
gi|225044661|gb|EEG54907.1| hypothetical protein CLOSTASPAR_03028 [Clostridium asparagiforme
DSM 15981]
Length = 428
Score = 36.2 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 63 LKLQKINGELEKIAVQELIVETLKKQEI-EKSGITFDSNTVNYFFVQHARNTGLSAEDFS 121
+ L ++ ++ AV+ I L +E+ ++ I ++ V+ A + ++
Sbjct: 339 MTLDQMKEQMRPQAVKR-IETRLVLEEVVKQENIEVSDERLDEEIVKMAAAYQMESDKLK 397
Query: 122 SFLDKQGIGDNHFKQYLAIQ 141
++ +Q K+ LA+Q
Sbjct: 398 EYMSEQ--DKKQMKEDLAVQ 415
>gi|294338772|emb|CAZ87106.1| putative peptidyl-prolyl isomerase [Thiomonas sp. 3As]
Length = 274
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 29/282 (10%), Positives = 81/282 (28%), Gaps = 46/282 (16%)
Query: 35 SWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSG 94
S A +++ ++G IT + + Q+++ + ++Q + +
Sbjct: 18 SCAAQAQVVLRVDGHPITLEEAEA-------VNPQAADQPQVRQQVVEQLAQQQLLADAL 70
Query: 95 ITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFML 154
+ + A + ++ Q ++ +
Sbjct: 71 KSVPPQ----------AQARIEAGQ------------KNLRRQALAQLSAEAFLQAHPIS 108
Query: 155 KYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPK 214
+ E A ++ + ++ R+Y +R ++ P+ + + R
Sbjct: 109 Q----EAIRQAYEKHIADLPTRQYWLRWIVVKTPEEA----------KRVLDALRGGKQT 154
Query: 215 DCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKK-SQNNTTNPYVTQKGVEYIAIC 273
+ + G + E + + +++K P + + I +
Sbjct: 155 FTALALHHSIGQNAELGGALGWQSEQAMSAEVLGVVRKLQPGQVAGPIALGENLAIIQLV 214
Query: 274 DKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+R L Q + +V++L NA I
Sbjct: 215 AERTPP--KPDFEQLKPQIEQQLRQAALQAHVQELAKNAKID 254
>gi|121634931|ref|YP_975176.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis FAM18]
gi|120866637|emb|CAM10388.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis FAM18]
gi|325132578|gb|EGC55271.1| hypothetical protein NMBM6190_0987 [Neisseria meningitidis M6190]
gi|325138351|gb|EGC60920.1| hypothetical protein NMBES14902_1084 [Neisseria meningitidis
ES14902]
gi|325142491|gb|EGC64895.1| hypothetical protein NMB9615945_0995 [Neisseria meningitidis
961-5945]
gi|325198371|gb|ADY93827.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 512
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ + +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|325130315|gb|EGC53082.1| hypothetical protein NMBOX9930304_0938 [Neisseria meningitidis
OX99.30304]
Length = 512
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 5/149 (3%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLK 64
+F S+ + LI V + + E I+D I+ + +
Sbjct: 1 MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGDEKISDHSINNAMQ-NE 59
Query: 65 LQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGLSAEDF 120
Q L+ KQ + GI+ S + V H N
Sbjct: 60 QADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIVDDPNFHDANGKFDHALL 119
Query: 121 SSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
+ +L ++ + ++ F + + Q ++V
Sbjct: 120 NRYLSQRHMSEDQFVEEIRDQFALQNLVN 148
>gi|302337811|ref|YP_003803017.1| trigger factor [Spirochaeta smaragdinae DSM 11293]
gi|301634996|gb|ADK80423.1| trigger factor [Spirochaeta smaragdinae DSM 11293]
Length = 454
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 62/174 (35%), Gaps = 14/174 (8%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELE 73
K L V I + I + + + ++ + T D+ K I +L++ +
Sbjct: 235 KELAGKSVKIKVVVTAIKEKQVPELDDELAQDVSDKYETLADLRKDIR-RQLEESLEKKF 293
Query: 74 KIAVQELIVETLKKQEIEKSGITFD--SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ E I + K E + + + + + + + + + + FL QG
Sbjct: 294 REVKSEAIFD--KIIEGSELAVPTSMLTAELENSWQRFVQQSRMPEDQLVQFLQIQGKSK 351
Query: 132 NHF--------KQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVRE 177
++ L +Q + +++ + + + E+E KQ +N +
Sbjct: 352 ETVFEEWKPQAERSLKVQLLMEKIIEKE-SPEVTDDEVEAEIRKQAEENGQEFD 404
>gi|184200753|ref|YP_001854960.1| trigger factor [Kocuria rhizophila DC2201]
gi|238689203|sp|B2GGB4|TIG_KOCRD RecName: Full=Trigger factor; Short=TF
gi|183580983|dbj|BAG29454.1| trigger factor [Kocuria rhizophila DC2201]
Length = 448
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 10/103 (9%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
+ E+ + A E + E + + + + + + ++ G+ F+ LD
Sbjct: 330 EHRAEVRQNAENAFRNEIILDAVAEAEEVGVEQSELIDYIINMSQQYGMDPNQFAQMLDG 389
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQK 169
G + +V + + K +N +
Sbjct: 390 SG----------QAGMMVGEVRRRKALAKVLETATVTDSNGET 422
>gi|284990112|ref|YP_003408666.1| trigger factor [Geodermatophilus obscurus DSM 43160]
gi|284063357|gb|ADB74295.1| trigger factor [Geodermatophilus obscurus DSM 43160]
Length = 491
Score = 36.2 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 56 ISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGL 115
+ R A Q+ +E+ + I++ + + +T D+ ++ + A+ +
Sbjct: 334 VESREAYDADQRK--TIEEAVRTQFILDAI----ADAREVTVDNEDLSAQIMAQAQRNRM 387
Query: 116 SAEDFSSFLDKQG 128
S E ++ L + G
Sbjct: 388 SPEQYAQQLQQGG 400
>gi|317053465|ref|YP_004119232.1| nitrogen fixation protein NifM [Pantoea sp. At-9b]
gi|255761142|gb|ACU32741.1| nitrogen fixation cis-trans peptidyl prolyl isomerase [Pantoea sp.
At-9b]
gi|316953204|gb|ADU72676.1| nitrogen fixation protein NifM [Pantoea sp. At-9b]
Length = 261
Score = 36.2 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 182 TVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESD 241
+L + + +Q+ +R ++++ + G+ ++
Sbjct: 132 HLLLTTDQDGPAVHRQMQQLRLQITNNRQAFSSL---AQRWSHCPSALEGGRMGWIGRGL 188
Query: 242 LHPQFQNLL-KKSQNNTTNPYVTQKGVEYI 270
L+P+ + +L N + P TQ G +
Sbjct: 189 LYPELEEVLFAMKPNAVSQPIATQLGWHLL 218
>gi|27468268|ref|NP_764905.1| trigger factor [Staphylococcus epidermidis ATCC 12228]
gi|57867150|ref|YP_188813.1| trigger factor [Staphylococcus epidermidis RP62A]
gi|282875904|ref|ZP_06284771.1| trigger factor [Staphylococcus epidermidis SK135]
gi|293366376|ref|ZP_06613055.1| trigger factor [Staphylococcus epidermidis M23864:W2(grey)]
gi|38258350|sp|Q8CNY4|TIG_STAES RecName: Full=Trigger factor; Short=TF
gi|67461621|sp|Q5HNM8|TIG_STAEQ RecName: Full=Trigger factor; Short=TF
gi|27315814|gb|AAO04949.1|AE016748_183 trigger factor [Staphylococcus epidermidis ATCC 12228]
gi|57637808|gb|AAW54596.1| trigger factor [Staphylococcus epidermidis RP62A]
gi|281294929|gb|EFA87456.1| trigger factor [Staphylococcus epidermidis SK135]
gi|291319501|gb|EFE59868.1| trigger factor [Staphylococcus epidermidis M23864:W2(grey)]
gi|329724694|gb|EGG61200.1| trigger factor [Staphylococcus epidermidis VCU144]
gi|329733741|gb|EGG70067.1| trigger factor [Staphylococcus epidermidis VCU045]
gi|329737250|gb|EGG73504.1| trigger factor [Staphylococcus epidermidis VCU028]
Length = 433
Score = 36.2 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQE--------IEKSGITFDSNTVNYFFVQ 108
+ + L +I+G+ E+ ++ + ++ + ++ I ++ +
Sbjct: 326 QQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTLTAIADEENIEVSDEDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +S ED S L I N +
Sbjct: 386 MSEQFNISVEDIKSTLGNTDIVKNDVR 412
>gi|319400991|gb|EFV89210.1| trigger factor [Staphylococcus epidermidis FRI909]
Length = 433
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQE--------IEKSGITFDSNTVNYFFVQ 108
+ + L +I+G+ E+ ++ + ++ + ++ I ++ +
Sbjct: 326 QQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTLTAIADEENIEVSDEDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +S ED S L I N +
Sbjct: 386 MSEQFNISVEDIKSTLGNTDIVKNDVR 412
>gi|295401127|ref|ZP_06811101.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|294976920|gb|EFG52524.1| SMC domain protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 1117
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 92/252 (36%), Gaps = 23/252 (9%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLDKQG 128
++ K V+E I ++ + +++ + V + A + + E L+K
Sbjct: 604 DVSKWKVEEDIDIAVEVKALQQDCLQL-KEAVQQALQKWRDAESAQQAIEQEMRLLEKDI 662
Query: 129 IGDNH-----FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
++Y +Q+ W + + E+E+ ++ + + TVR+ R +
Sbjct: 663 RELQTEWQIRLREYNQLQASWRE-----KYADFSFTEIEVIRDQMRRREETVRQLQKR-I 716
Query: 184 LFSIP--DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LES 240
SIP D KL + + +++++ E ++RL ++ + KA + +E
Sbjct: 717 DDSIPFLDKKLSEKEQLAQQLQEIETEKVRLVSLHKAKQQQIDSYKQQLLEKAGTVQMEE 776
Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
L Q LL ++ + A S + + E+
Sbjct: 777 QLLHIEQQLLHLKSGEEQAYQR------WLQAQKQYQTLDAEAKAIQQSLEEGKAQYEEA 830
Query: 301 EAEYVKKLRSNA 312
+ ++++L A
Sbjct: 831 RSRWLRELEKTA 842
>gi|290508670|ref|ZP_06548041.1| nitrogen fixation protein NifM [Klebsiella sp. 1_1_55]
gi|289778064|gb|EFD86061.1| nitrogen fixation protein NifM [Klebsiella sp. 1_1_55]
Length = 266
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Query: 177 EYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQY 236
+ L R +L ++ + +++ E SR ++ + + G+ +
Sbjct: 126 QRLTRHLLLTVDGDDQAVYSRIRELHGQIEASREAFAPL---AQRHSHCPSALDGGRLGW 182
Query: 237 LLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNT 293
+ L+PQ + L ++N + P ++ G + R +A SA++
Sbjct: 183 IGRGLLYPQLEEALFALAENALSAPVASELGWHLVWCEAIRPAAPMTPEQALESARDY 240
>gi|166031010|ref|ZP_02233839.1| hypothetical protein DORFOR_00691 [Dorea formicigenerans ATCC
27755]
gi|166029277|gb|EDR48034.1| hypothetical protein DORFOR_00691 [Dorea formicigenerans ATCC
27755]
Length = 428
Score = 36.2 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 81 IVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA 139
I L + I K+ I ++ + A++ + E + + K +A
Sbjct: 356 IKTRLVLEAIAKAENIEISDEKIDEKLAEMAKSYDMEVEKLKELVGEA--EKQQMKDDMA 413
Query: 140 IQSIWPDVVKN 150
+Q +V+N
Sbjct: 414 VQEAIDFLVEN 424
>gi|312112097|ref|YP_003990413.1| SMC domain protein [Geobacillus sp. Y4.1MC1]
gi|311217198|gb|ADP75802.1| SMC domain protein [Geobacillus sp. Y4.1MC1]
Length = 1117
Score = 36.2 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 92/252 (36%), Gaps = 23/252 (9%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQH--ARNTGLSAEDFSSFLDKQG 128
++ K V+E I ++ + +++ + V + A + + E L+K
Sbjct: 604 DVSKWKVEEDIDIAVEVKALQQDCLQL-KEAVQQALQKWRDAESAQQAIEQEMRLLEKDI 662
Query: 129 IGDNH-----FKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTV 183
++Y +Q+ W + + E+E+ ++ + + TVR+ R +
Sbjct: 663 RELQTEWQIRLREYNQLQASWRE-----KYADFSFTEIEVIRDQMRRREETVRQLQKR-I 716
Query: 184 LFSIP--DNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYL-LES 240
SIP D KL + + +++++ E ++RL ++ + KA + +E
Sbjct: 717 DDSIPFLDKKLSEKEQLAQQLQEIETEKVRLVSLHKAKQQQIDSYKQQLLEKAGTVQMEE 776
Query: 241 DLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
L Q LL ++ + A S + + E+
Sbjct: 777 QLLHIEQQLLHLKSGEEQAYQR------WLQAQKQYQTLDAEAKAIQQSLEEGKAQYEEA 830
Query: 301 EAEYVKKLRSNA 312
+ ++++L A
Sbjct: 831 RSRWLRELEKTA 842
>gi|312126469|ref|YP_003991343.1| hypothetical protein Calhy_0216 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776488|gb|ADQ05974.1| conserved hypothetical protein [Caldicellulosiruptor hydrothermalis
108]
Length = 229
Score = 36.2 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 41/168 (24%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS------------ 57
S + + + VLI + + +NG I D+
Sbjct: 4 SKILIGICSLAVLIGIVAAGWSLASKKELPKDVAAVVNGHKIYKKDLDMAYGLEELRYEN 63
Query: 58 KRIALLKLQKINGE-------------LEKIAVQELIVETLKKQEIEKSGITFDSNTVNY 104
+ + +L+ G+ ++ + E+I + E +K G +
Sbjct: 64 AKASFEELKNKYGDDVAKKLEGSLRKKTKQEILDEMIERLVLYDEAKKEGCEVSVDEAKA 123
Query: 105 FFVQH----------------ARNTGLSAEDFSSFLDKQGIGDNHFKQ 136
++ + A NT +AE +SFL K GI ++ +K+
Sbjct: 124 YYNKTQKALQDIISGKIATDEANNTKKAAELVNSFLRKHGISEDEYKK 171
>gi|159897565|ref|YP_001543812.1| threonine aldolase [Herpetosiphon aurantiacus ATCC 23779]
gi|159890604|gb|ABX03684.1| Threonine aldolase [Herpetosiphon aurantiacus ATCC 23779]
Length = 344
Score = 36.2 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 77 VQELIVETLKKQEIEKS-----GITFDSNTVNYFFVQHARN-TGLSAEDFSSFLDKQGIG 130
+ LI + + + + ++ I D +V + + S E L + G+
Sbjct: 250 RERLIDDHVNAKMLAEALSQLPQIELDLASVQTNIIVFGLRDSTFSPEQLVERLRQAGVL 309
Query: 131 DNHFKQYLAI 140
FK L
Sbjct: 310 IVPFKGRLRA 319
>gi|332885978|gb|EGK06222.1| hypothetical protein HMPREF9456_00096 [Dysgonomonas mossii DSM
22836]
Length = 673
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 47/149 (31%), Gaps = 13/149 (8%)
Query: 171 KNITVREYLIRTVLF---SIPDNKLQNQGFVQKRIKDAEESR--LRLPKDCNKLEKFAS- 224
K V I VLF IP + Q + ++ R C++ +
Sbjct: 229 KRPAVGSVDIEQVLFNFSRIPADLNQIDSVGKVAWREYRNIRTASDYQSLCDEFTRVMQM 288
Query: 225 KIHDVSIGKAQYLLESDLHPQFQNLL--KKSQNNTTNPYVTQKGVEYIAICDKRDLGGEI 282
G LES L P F K + + + P ++ G I + K +
Sbjct: 289 GEKGCHFGVL--NLESRLSPTFIEAAFNLKKEGDVSEPVQSEYGFHIIRLLKKIPVPSYA 346
Query: 283 ALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+K+ L A+ + E + R
Sbjct: 347 DMKSALKARILES---DKSEEMTIEKRKR 372
>gi|289670755|ref|ZP_06491830.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 252
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 60/215 (27%), Gaps = 14/215 (6%)
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
F + A L + L + +Q A +I V+ +I
Sbjct: 30 EFVREFADRLLLVEQARRVHLQDDPVVAARIRQ--ATDAILAKAVQTRARESARIDASQI 87
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR----LPKDCNKL 219
A + +L + P + + + A RL+ +L
Sbjct: 88 KAQFDAHPHDYDEVHLSHLFVALKPQGEARRGTPLTDAQALARAQRLKQQLESGTPFAEL 147
Query: 220 EKFAS--KIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
S G+ + ++ F + + + P +G I + +R
Sbjct: 148 AMRESDDGSTAAEGGELSPIFLRNVADAFVAPVQDLAVGQVSAPVRGPEGYHLIRVDARR 207
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A Q ++ A+ +++LR
Sbjct: 208 PATLDSA-----RGQIEVQLRDQAAADALEQLRQA 237
>gi|242242939|ref|ZP_04797384.1| trigger factor [Staphylococcus epidermidis W23144]
gi|242233540|gb|EES35852.1| trigger factor [Staphylococcus epidermidis W23144]
Length = 433
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVETLKKQE--------IEKSGITFDSNTVNYFFVQ 108
+ + L +I+G+ E+ ++ + ++ + ++ I ++ +
Sbjct: 326 QQGLDLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTLTAIADEENIEVSDEDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +S ED S L I N +
Sbjct: 386 MSEQFNISVEDIKSTLGNTDIVKNDVR 412
>gi|241763692|ref|ZP_04761741.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax
delafieldii 2AN]
gi|241367081|gb|EER61455.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Acidovorax
delafieldii 2AN]
Length = 641
Score = 36.2 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 55/166 (33%), Gaps = 24/166 (14%)
Query: 9 LSDFIKLLTTYFVLIIFCIVPIVSY-----KSWAMSSRIRTTINGEVI--TDGDISKRIA 61
K +L+ I+P ++ S + ++G I TD D + ++
Sbjct: 2 FESIRKHSKVVMLLLFLLIIPSFVLVGIDRSYFSQKSSVVARVDGHDISQTDWDNAHKVE 61
Query: 62 LLKLQKINGELEKI----------AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+++ + ++ ++ L+ + + + +K + + + +
Sbjct: 62 TDRIRAQSPTVDAKLLDSPQARYATLERLVRDRVFQAASQKMHLVTSDSRLARSLQEIPA 121
Query: 112 -------NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKN 150
+ L AE + + + QG+ F+ + V+
Sbjct: 122 IAALKRPDGSLDAEAYRALVGAQGMSPEGFEANVRRDISVNQVLGG 167
>gi|322412103|gb|EFY03011.1| foldase protein PrsA [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 354
Score = 36.2 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
Query: 21 VLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQEL 80
++ + ++ + + +S ++++ + G+ I+ D K K + L
Sbjct: 11 IVTLASVITLTACQSTNDNTKVVSM-KGDTISVSD------FYNEIKNTEVSRKAMLHLL 63
Query: 81 IVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI 140
I + Q G + V + + A G S FS L + + +K+ +
Sbjct: 64 IGRVFEAQ----YGDKVSNKEVEKAYNKTADQYGAS---FSGVLAQASLTPETYKKQIRS 116
Query: 141 QSIWPDVVKNDFMLKYGNLEMEIP 164
+ V+ + E +
Sbjct: 117 SKLVEYAVREAAKKELTTKEYQKA 140
>gi|251782838|ref|YP_002997141.1| foldase protein PrsA [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391468|dbj|BAH81927.1| peptidyl-prolyl cis-trans isomerase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323127643|gb|ADX24940.1| foldase protein PrsA [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 355
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 62/233 (26%), Gaps = 12/233 (5%)
Query: 91 EKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLA----IQSIWPD 146
+ G + V + + A G S FS+ L + + +K+ + ++ +
Sbjct: 70 AQYGDKVSNKEVEKAYNKTADQYGAS---FSAALAQSSLTPETYKKQIRSSKLVEYAVRE 126
Query: 147 VVKNDFMLKYGNLEMEIPANKQKMK--NITVREYLIRTVLFSIPDNKLQNQGFVQKRIKD 204
K + + E + + E + + +K
Sbjct: 127 TAKKELTTEAYKKAYETYTPTMAAQVIALDSEETAKSVLEELKAEGADFAAIAKEKTTAA 186
Query: 205 AEESRLRLPKDCNKL-EKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVT 263
++ + L + G ++ +QN + T
Sbjct: 187 DKKIAYKFDSGATSLPADVVKAASGLKEGDMSEVISVLDPATYQNKFYIVK--VTKKAEK 244
Query: 264 QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAIIHY 316
+ + K + E + ++K + K +N ++ Y
Sbjct: 245 KADWKVYKKRLKAIILAEKTRDMNFQNKIIAKALDKANVKIKDKAFANILVQY 297
>gi|125624690|ref|YP_001033173.1| foldase protein prsA precursor [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493498|emb|CAL98476.1| Foldase protein prsA precursor [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071484|gb|ADJ60884.1| foldase protein prsA precursor [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 308
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 85/299 (28%), Gaps = 32/299 (10%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKI 75
L V +V + S +S+ T+ G+ I D+ K Q N L+ +
Sbjct: 8 LVMATVFAGAALVTLSGCSSSDSASKDIITMKGDTIRVSDLYKEAKQFPSQPTNTLLQNL 67
Query: 76 AVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
++ + G VN G F+S L +QG+ + F
Sbjct: 68 TFDKIFT--------KDFGKEVTDKDVNKKVKSLKDQYG---SQFASALQQQGLTEASFT 116
Query: 136 QYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
Y+ Q + + E+E Y + + +
Sbjct: 117 PYMRTQML---------EQAAIDHEIEATQYTDANLKKAWESYHPDVTAYVVSETSKDAA 167
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
K + + K + + + Q + +F ++++ +
Sbjct: 168 TKALDAAKKDDAGKASFEKTNAANKVTFNSTSTTVPTEVQTAAFKLKNGEFSSVIESTSA 227
Query: 256 NTTNPYVTQKGVEYIAICDKRDLGGEIAL-KAYLSAQNTPTKIEKHE------AEYVKK 307
+T + + + G ++ K L K + A+Y+KK
Sbjct: 228 STGATS-----YYIVEMVKSSEKGSDMNKYKKELKNVIKAEKEQDTTFVSGVIAKYLKK 281
>gi|313206481|ref|YP_004045658.1| ppic-type peptidyl-prolyl cis-trans isomerase [Riemerella
anatipestifer DSM 15868]
gi|312445797|gb|ADQ82152.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Riemerella
anatipestifer DSM 15868]
gi|315023578|gb|EFT36582.1| Peptidyl-prolyl cis-trans isomerase [Riemerella anatipestifer
RA-YM]
gi|325336073|gb|ADZ12347.1| Peptidyl-prolyl cis-trans isomerase, PpiC-type [Riemerella
anatipestifer RA-GD]
Length = 708
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 19 YFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKING-----ELE 73
L+ F + P K + I +NGE IT + ++++ L++ Q + LE
Sbjct: 19 AIALLAFLVNPDSLDKVFGKDPNILGKVNGEEITRDEYNEQLMLMRNQAESQGQPLVGLE 78
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSN 100
+ A Q L+ L KQ+ EK G+ +
Sbjct: 79 EQAWQTLVQSKLIKQQFEKMGLELTED 105
>gi|301595770|ref|ZP_07240778.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
AB059]
Length = 91
Score = 36.2 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 14 KLLTTYFVLIIFCIVPIVSYKSWAM-SSRIRTTINGEVITDGDISKRIA----LLKLQKI 68
K L +F ++ S S+A + + ++ VI D+ + +A L+ QK
Sbjct: 4 KHLKQFFKATTLAVLISSSMHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKK 63
Query: 69 NGELEK----IAVQELIVETLKKQEIEK 92
++ + +LI+ + ++++K
Sbjct: 64 EVPPQQYLQFQVLDQLILRQAQLEQVKK 91
>gi|298503010|ref|YP_003724950.1| peptidylprolyl isomerase [Streptococcus pneumoniae TCH8431/19A]
gi|298238605|gb|ADI69736.1| peptidylprolyl isomerase [Streptococcus pneumoniae TCH8431/19A]
Length = 344
Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 32 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------NN 81
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D V+ + + G E++ L + G+
Sbjct: 82 PSAQQVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYG---ENYQRVLSQAGMTLET 138
Query: 134 FKQYLA 139
K +
Sbjct: 139 RKAQIR 144
>gi|294626443|ref|ZP_06705043.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292599242|gb|EFF43379.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 294
Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 14/215 (6%)
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
F + A L + L + +Q A +I V+ +I
Sbjct: 72 EFVREFADRLLLVEQARREHLQDDPVVAARIRQ--ATDAILAKAVQTRARESAQIDAAQI 129
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR------LPKDCN 217
A + +L + P + + A RL+ P
Sbjct: 130 KAQFDAHPHDYDEVHLSHLFVALKPQGAARRGTPLTDAQALARAQRLKQQLESGTPFAEL 189
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ + G+ + ++ F + + + P +G I + +R
Sbjct: 190 AMRQSDDASTAAEGGELSPMFLRNVADAFVAPVQDLAVGQVSAPVRGAEGYHLIRVDARR 249
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A Q ++ A +++LR
Sbjct: 250 PATLDSA-----RGQIEVQLRDQAAANALEQLRQA 279
>gi|224540967|ref|ZP_03681506.1| hypothetical protein CATMIT_00118 [Catenibacterium mitsuokai DSM
15897]
gi|224526118|gb|EEF95223.1| hypothetical protein CATMIT_00118 [Catenibacterium mitsuokai DSM
15897]
Length = 426
Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 8/80 (10%)
Query: 52 TDGDISKRIALLKLQKINGELEKIAVQE----LIVETLKKQEIEKSGITFDSNTVNYFFV 107
+ ++ ++ + I +++ A + LI++ + K E I +
Sbjct: 329 LNIELYTKMTGKTMDDIKADVKDQAEERVKLNLILDKIVKAE----NIEVTDAEMEDEMK 384
Query: 108 QHARNTGLSAEDFSSFLDKQ 127
+ A + E+ L Q
Sbjct: 385 EIATYYNMPLEEVKKVLGGQ 404
>gi|226227815|ref|YP_002761921.1| trigger factor [Gemmatimonas aurantiaca T-27]
gi|226091006|dbj|BAH39451.1| trigger factor [Gemmatimonas aurantiaca T-27]
Length = 414
Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
E+ ++LIV+TL E+ +T + V+ + A+ + L K G
Sbjct: 335 AERQVRRDLIVDTL----AERESLTASAADVDARVEELAKARNADPGQVYAQLQKAG 387
>gi|124516599|gb|EAY58107.1| probable peptidil-prolyl cis-trans isomerase [Leptospirillum
rubarum]
Length = 289
Score = 36.2 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 231 IGKAQYLLESDLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAI-CDKR--DLGGEIALKA 286
G + E + P+F + + + T P + G+ Y I + L + A +
Sbjct: 176 GGPVGKIYEGTVPPKFVSFFFGVPEGSITGPIPLKDGIHYFKIDRSVKGVQLTLDQAREG 235
Query: 287 YLSAQNTPTKIEKHEAEYVKKLRSNAIIH 315
+ + + V LRS +
Sbjct: 236 -IRNYLRNRQNKTIYQTLVNHLRSTTTVQ 263
>gi|309812190|ref|ZP_07705948.1| trigger factor [Dermacoccus sp. Ellin185]
gi|308433877|gb|EFP57751.1| trigger factor [Dermacoccus sp. Ellin185]
Length = 495
Score = 36.2 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 15/101 (14%)
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQ 127
+++A Q L+ E ++K EI+ + + + + A+ G+ F+ LD Q
Sbjct: 327 TESTRQQVATQLLLDEIVEKHEIQ-----VGQDELIEYLIMSAQQYGMDPNTFAQALDAQ 381
Query: 128 GIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQ 168
G I +V + +
Sbjct: 382 GQVPA----------IMGEVARRKALATVLESATVKDTAGN 412
>gi|158321200|ref|YP_001513707.1| trigger factor [Alkaliphilus oremlandii OhILAs]
gi|166987584|sp|A8MIS9|TIG_ALKOO RecName: Full=Trigger factor; Short=TF
gi|158141399|gb|ABW19711.1| trigger factor [Alkaliphilus oremlandii OhILAs]
Length = 428
Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ K ELI+E + +E I + + A+ E + L +Q +
Sbjct: 351 DAVKTVKNELILEKIGAKE----NIVATDEELEEQLEKMAKQYNQEIEKLKTNLRQQDLN 406
Query: 131 D 131
Sbjct: 407 A 407
>gi|21244891|ref|NP_644473.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
gi|21110602|gb|AAM39009.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 320
Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 26/211 (12%), Positives = 59/211 (27%), Gaps = 14/211 (6%)
Query: 108 QHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANK 167
+ A L + + L + +Q A +I V+ +I A
Sbjct: 102 EFADRLLLVEQARRAHLQDDPVVAARIRQ--ATDAILAKAVQTRARESAQIDAAQIKAQF 159
Query: 168 QKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR------LPKDCNKLEK 221
+ +L + P + + + A RL+ P + +
Sbjct: 160 DAHPHDYDEVHLSHVFVALKPQGEARRGTPLTDAQALARAQRLKQQLESGTPFAELAMRQ 219
Query: 222 FASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGG 280
G+ + ++ F + + + P +G I + +R
Sbjct: 220 SDDASTAAEGGELSPMFLRNVADAFVAPVQDLAVGQVSVPVRGPEGYHLIRVDARRPATL 279
Query: 281 EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A Q ++ A +++LR
Sbjct: 280 DSA-----RGQIEVQLRDQAAANALEQLRQA 305
>gi|89256253|ref|YP_513615.1| hypothetical protein FTL_0896 [Francisella tularensis subsp.
holarctica LVS]
gi|254367592|ref|ZP_04983613.1| hypothetical protein FTHG_00855 [Francisella tularensis subsp.
holarctica 257]
gi|89144084|emb|CAJ79335.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|134253403|gb|EBA52497.1| hypothetical protein FTHG_00855 [Francisella tularensis subsp.
holarctica 257]
Length = 476
Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 44/133 (33%), Gaps = 13/133 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKR 59
+ S +D +K T+ V+I + ++S + + S + I+ +
Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGL 115
+ E ++ + ++I + L + ++ I + ++
Sbjct: 61 VQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFFDKDGKF 116
Query: 116 SAEDFSSFLDKQG 128
SAE + G
Sbjct: 117 SAEKLKQVVAYLG 129
>gi|237736663|ref|ZP_04567144.1| trigger factor [Fusobacterium mortiferum ATCC 9817]
gi|229420525|gb|EEO35572.1| trigger factor [Fusobacterium mortiferum ATCC 9817]
Length = 428
Score = 36.2 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+LI+E + + GI + + + A+ G+ L+K
Sbjct: 349 AAAKVKADLILEAI----AKAEGIEVSEDEIKEKMTEIAKMYGMDLAKLEEELNKH-KNY 403
Query: 132 NHFKQYLAIQSIWPDVV 148
++FK + + + +
Sbjct: 404 DNFKMTVQGECLMQKAI 420
>gi|229552932|ref|ZP_04441657.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1]
gi|258540457|ref|YP_003174956.1| peptidylprolyl isomerase [Lactobacillus rhamnosus Lc 705]
gi|229313708|gb|EEN79681.1| peptidylprolyl isomerase [Lactobacillus rhamnosus LMS2-1]
gi|257152133|emb|CAR91105.1| Endopeptidase maturation protein prtM [Lactobacillus rhamnosus Lc
705]
Length = 300
Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 85/272 (31%), Gaps = 52/272 (19%)
Query: 14 KLLTTYFVLIIFC--IVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGE 71
K L F+ + I+ + +S S T +G +T + K K +
Sbjct: 3 KKLRVPFLAAMMASSIMLLSGCQSKQADSTTVATYSGGQVTQ------ASFYKELKQSPT 56
Query: 72 LEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGD 131
+ + LI L + G + + +V+ + + G E+F+SFL + G
Sbjct: 57 TKTVLANLLIYRALN----KAYGKSVSAKSVDNTYNSYKNEYG---ENFTSFLSQNGFSK 109
Query: 132 NHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNK 191
+ F+Q + + +K+K +T +
Sbjct: 110 SSFRQSIRTNLL-------------------SEVALKKLKKVTNSQ-------LKAAWKT 143
Query: 192 LQNQGFVQKRIKDAEESRLRLPKDCNKLEKF---ASKIH-DVSIGKAQYLLESD-----L 242
Q + VQ + E + ++ D + F A D S + + L
Sbjct: 144 YQPKVTVQHILTSDESTAKQVISDLAAGKDFTTLAKTYSIDTSTKDKGGKVSFESNSKSL 203
Query: 243 HPQFQN-LLKKSQNNTTN-PYVTQKGVEYIAI 272
F++ K T P G E I +
Sbjct: 204 DSTFKDAAYKLKNGEYTQSPVKVTNGYEVIKM 235
>gi|311031426|ref|ZP_07709516.1| trigger factor [Bacillus sp. m3-13]
Length = 428
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 8/84 (9%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + EK L +E + K E I N + A +S + L
Sbjct: 348 QMKEDAEKRVKMNLTLEAISKAE----NIEVTDEEANEEIEKMAGMYNMSVDQIKQALG- 402
Query: 127 QGIGDNHFKQYLAIQSIWPDVVKN 150
K+ L I+ +V+N
Sbjct: 403 ---SLEGLKEDLKIRKAIDFLVEN 423
>gi|269123537|ref|YP_003306114.1| trigger factor [Streptobacillus moniliformis DSM 12112]
gi|268314863|gb|ACZ01237.1| trigger factor [Streptobacillus moniliformis DSM 12112]
Length = 424
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 86 KKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP 145
K E+E GI + + A G++ + ++ L+K G N F + Q +
Sbjct: 358 KIAEVE--GIEVKEAEFDAELQKIASMYGMTVDQLTAELEKTD-GVNRFFGQINSQLFFA 414
Query: 146 DV 147
V
Sbjct: 415 KV 416
>gi|312622972|ref|YP_004024585.1| trigger factor [Caldicellulosiruptor kronotskyensis 2002]
gi|312203439|gb|ADQ46766.1| trigger factor [Caldicellulosiruptor kronotskyensis 2002]
Length = 438
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 14/124 (11%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDS----NTVNYFFVQHARN---TGLSAED 119
+I + ++ A E+I L+K + + I N +NY+ ARN G++ E
Sbjct: 273 RIKEKNDQKAKDEMIDAILEKI-AQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYER 331
Query: 120 FSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLE--MEIPANKQKMKNITVRE 177
+ + G D F+ + V N + K +E QK +
Sbjct: 332 YLQAI---GKTDKEFRSQFR-ERAEKAVRNNLILEKIAKVENIQATDEELQKELERLAKM 387
Query: 178 YLIR 181
Y +
Sbjct: 388 YNLE 391
>gi|322489174|emb|CBZ24429.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 425
Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 12/130 (9%)
Query: 144 WPDVVKNDFMLK---YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQK 200
W ++ YG E+ ++ N+ R + IR ++ + +
Sbjct: 25 WHAALRGRVKPLAYLYGVSHEEVRRELRRG-NVENRTFRIRHIVPLFVSKEELLDRKNLQ 83
Query: 201 RIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNP 260
I R ++C K+ D + L D+ +L T
Sbjct: 84 HIAKERNLDGRAIRNCRYRSKYVQAY-DADVRSVPPALPLDIGGALAQVL-------TAR 135
Query: 261 YVTQKGVEYI 270
T G+ I
Sbjct: 136 VTTCFGLHLI 145
>gi|325105922|ref|YP_004275576.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans
DSM 12145]
gi|324974770|gb|ADY53754.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pedobacter saltans
DSM 12145]
Length = 699
Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 42/128 (32%), Gaps = 4/128 (3%)
Query: 180 IRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLE 239
R +L + ++ + + + + ++F + S G
Sbjct: 348 ARHILLNPATEGGMDKA--KSKADSIKNLIQKGASFAELAKEFGTDGSKDSGGDLGTFAR 405
Query: 240 SDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEK 299
+ P+F++ + TQ GV I I ++ +G +K + + +
Sbjct: 406 GSMVPKFEDAVFNGPVGQVFTLETQFGVHVIEI--QKQIGSSKVVKVAVVDKQIAPSSQT 463
Query: 300 HEAEYVKK 307
+A Y K
Sbjct: 464 EQAAYQKA 471
>gi|298207424|ref|YP_003715603.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Croceibacter
atlanticus HTCC2559]
gi|83850060|gb|EAP87928.1| peptidyl-prolyl cis-trans isomerase, PpiC-type [Croceibacter
atlanticus HTCC2559]
Length = 700
Score = 36.2 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIV----ETLKKQEIEKSGITFD 98
T+ GE I + +K++ L Q AV + E + Q+ EK GI
Sbjct: 45 VATVGGENIDRTEFAKQVDLYSKQLGPNASTMQAVNRVYDAKVREVVLAQQFEKLGIEVS 104
Query: 99 SNTVNYFFV 107
+
Sbjct: 105 PEQLKATMA 113
>gi|210615407|ref|ZP_03290534.1| hypothetical protein CLONEX_02750 [Clostridium nexile DSM 1787]
gi|210150256|gb|EEA81265.1| hypothetical protein CLONEX_02750 [Clostridium nexile DSM 1787]
Length = 428
Score = 35.8 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 71 ELEKIAVQELIVETLKKQEIEKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
EL AV+ I L + I K+ I ++ + A + E F+ +
Sbjct: 347 ELRPQAVKR-IETRLVLEAIAKAENIEITDERIDEELAKMAEAYKMEVEKLKEFMGENE- 404
Query: 130 GDNHFKQYLAIQSIWPDVV 148
K+ + + D V
Sbjct: 405 -----KEQMKMDLAVQDAV 418
>gi|118497644|ref|YP_898694.1| hypothetical protein FTN_1053 [Francisella tularensis subsp.
novicida U112]
gi|195536345|ref|ZP_03079352.1| numod1 domain family protein [Francisella tularensis subsp.
novicida FTE]
gi|118423550|gb|ABK89940.1| outer membrane protein of unknown function [Francisella novicida
U112]
gi|194372822|gb|EDX27533.1| numod1 domain family protein [Francisella tularensis subsp.
novicida FTE]
Length = 477
Score = 35.8 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 43/133 (32%), Gaps = 13/133 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKR 59
+ S +D +K T+ V+I + ++S + + S + I+ +
Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGL 115
E ++ + ++I + L + ++ I + ++
Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFFDKDGKF 116
Query: 116 SAEDFSSFLDKQG 128
SAE + G
Sbjct: 117 SAEKLKQVVAYLG 129
>gi|314933830|ref|ZP_07841195.1| trigger factor [Staphylococcus caprae C87]
gi|313653980|gb|EFS17737.1| trigger factor [Staphylococcus caprae C87]
Length = 433
Score = 35.8 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 14/106 (13%)
Query: 44 TTIN---GEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVET-------LKKQEI 90
+N +I + + L LQ +I+G+ E +++ + L I
Sbjct: 307 AMVNTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEDQLREQMKDDAEQRVKTNLTLTAI 366
Query: 91 EKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ + ++ + + +S ED S L I N +
Sbjct: 367 ADAENVEVSDEDIDKELEKMSEQFNISVEDIKSTLGNTDIVKNDVR 412
>gi|115314710|ref|YP_763433.1| hypothetical protein FTH_0881 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502314|ref|YP_001428379.1| hypothetical protein FTA_0947 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254369242|ref|ZP_04985254.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|290953593|ref|ZP_06558214.1| peptidyl-prolyl cis-trans isomerase D [Francisella tularensis
subsp. holarctica URFT1]
gi|295313094|ref|ZP_06803784.1| peptidyl-prolyl cis-trans isomerase D [Francisella tularensis
subsp. holarctica URFT1]
gi|115129609|gb|ABI82796.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|156252917|gb|ABU61423.1| hypothetical protein FTA_0947 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122192|gb|EDO66332.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 477
Score = 35.8 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 44/133 (33%), Gaps = 13/133 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKR 59
+ S +D +K T+ V+I + ++S + + S + I+ +
Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGL 115
+ E ++ + ++I + L + ++ I + ++
Sbjct: 61 VQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFFDKDGKF 116
Query: 116 SAEDFSSFLDKQG 128
SAE + G
Sbjct: 117 SAEKLKQVVAYLG 129
>gi|83814441|ref|YP_445914.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Salinibacter ruber DSM 13855]
gi|83755835|gb|ABC43948.1| PPIC-type PPIASE domain protein [Salinibacter ruber DSM 13855]
Length = 685
Score = 35.8 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 59/238 (24%), Gaps = 35/238 (14%)
Query: 96 TFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP------ 145
T ++ FV A S + FLD HF+ +
Sbjct: 67 TLTLAELDSAFVDAAGGPQAAADSSLRAYRDFLD----RYLHFRLKVRAARDAGLDTLPR 122
Query: 146 ------DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
D + + E+ P + + + + +L +
Sbjct: 123 IRREVHDYRQERARPQLLRTEVYAPLA-RTLYERRTQAVDVSHILIRP---ASSSDTLAA 178
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-------- 251
R A + L S + + Q ++++
Sbjct: 179 YREAQAIADSVGRGVPFGDLALRNSDAPAARTEGRRGYRGRLGYLQAGDIVEPFEDRMYA 238
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
T++ + T+ G + + D+R + L L P + LR
Sbjct: 239 VPPGGTSDIFRTKFGYHILKVHDRRPAAQPVELAHILR---RPQGDSATSRRLLDSLR 293
>gi|15900858|ref|NP_345462.1| foldase protein PrsA [Streptococcus pneumoniae TIGR4]
gi|111657958|ref|ZP_01408665.1| hypothetical protein SpneT_02000847 [Streptococcus pneumoniae
TIGR4]
gi|149010372|ref|ZP_01831743.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP19-BS75]
gi|182683926|ref|YP_001835673.1| peptidylprolyl isomerase [Streptococcus pneumoniae CGSP14]
gi|225858774|ref|YP_002740284.1| foldase protein PrsA [Streptococcus pneumoniae 70585]
gi|303254448|ref|ZP_07340554.1| foldase protein PrsA [Streptococcus pneumoniae BS455]
gi|303259894|ref|ZP_07345869.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP-BS293]
gi|303262308|ref|ZP_07348252.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP14-BS292]
gi|303264730|ref|ZP_07350648.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS397]
gi|303269142|ref|ZP_07354921.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS458]
gi|46397004|sp|Q97R51|PRSA_STRPN RecName: Full=Foldase protein prsA; Flags: Precursor
gi|226712008|sp|B2IPD4|PRSA_STRPS RecName: Full=Foldase protein prsA; Flags: Precursor
gi|254783413|sp|C1C6V8|PRSA_STRP7 RecName: Full=Foldase protein prsA; Flags: Precursor
gi|14972456|gb|AAK75102.1| putative protease maturation protein [Streptococcus pneumoniae
TIGR4]
gi|147764853|gb|EDK71782.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP19-BS75]
gi|182629260|gb|ACB90208.1| peptidylprolyl isomerase [Streptococcus pneumoniae CGSP14]
gi|225721397|gb|ACO17251.1| foldase protein PrsA [Streptococcus pneumoniae 70585]
gi|302598615|gb|EFL65655.1| foldase protein PrsA [Streptococcus pneumoniae BS455]
gi|302636631|gb|EFL67122.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP14-BS292]
gi|302639099|gb|EFL69559.1| peptidylprolyl isomerase [Streptococcus pneumoniae SP-BS293]
gi|302641329|gb|EFL71697.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS458]
gi|302645817|gb|EFL76046.1| peptidylprolyl isomerase [Streptococcus pneumoniae BS397]
Length = 313
Score = 35.8 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------SN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D V+ + + G E++ L + G+
Sbjct: 51 PSAQQVLLNMTIQKVFEKQYGSELDDKEVDDTIAEEKKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLA 139
K +
Sbjct: 108 RKAQIR 113
>gi|208779446|ref|ZP_03246792.1| numod1 domain family protein [Francisella novicida FTG]
gi|208745246|gb|EDZ91544.1| numod1 domain family protein [Francisella novicida FTG]
Length = 477
Score = 35.8 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 43/133 (32%), Gaps = 13/133 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKR 59
+ S +D +K T+ V+I + ++S + + S + I+ +
Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGL 115
E ++ + ++I + L + ++ I + ++
Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNSMFFDKDGKF 116
Query: 116 SAEDFSSFLDKQG 128
SAE + G
Sbjct: 117 SAEKLKQVVAYLG 129
>gi|23010100|ref|ZP_00050908.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Magnetospirillum
magnetotacticum MS-1]
Length = 287
Score = 35.8 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 54/174 (31%), Gaps = 23/174 (13%)
Query: 39 SSRIRTTINGEVIT--------DGDISKRIALLKL-----QKINGELEKIAVQELIVETL 85
SS T+ I+ + + A LK Q + LE+ + +LI E
Sbjct: 42 SSSTVATVGKTPISAEEVRTAYQNQLQRYQAQLKRTLTPDQARSLGLERQVLSQLITEAA 101
Query: 86 KKQEIEKSGITFDSNTVNYFFVQ--HARNTGLSAED--FSSFLDKQGIGDNHFKQYLAIQ 141
Q+ G+ V +N + + F L + G+ + F + Q
Sbjct: 102 LDQKTTDLGLAVSDAAVLRAIQDEPSFKNANGTFDRVLFYQTLQRAGLNEAMF---VREQ 158
Query: 142 SIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQ 195
V+ + E+ +P ++ + E VL P +
Sbjct: 159 ---RSVIARLQLADAIVAELPVPQAIREAVHRYSTERRSAAVLTLAPSAAGEIP 209
>gi|317486003|ref|ZP_07944858.1| trigger factor [Bilophila wadsworthia 3_1_6]
gi|316922776|gb|EFV44007.1| trigger factor [Bilophila wadsworthia 3_1_6]
Length = 440
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 7/90 (7%)
Query: 58 KRIALLKLQKINGELEKIA------VQELIVETLKKQEIEKSGITFDSNTVNYFFVQHAR 111
+R+ L L+K + EK ++ L + +K IT + V A
Sbjct: 325 QRMGLDDLRKDQAQEEKREEAKKEALETLRPQVFLMALAQKENITVNDQEVEMAIYGMAM 384
Query: 112 NTGLSAEDFSSFLDKQGIGDNHFKQYLAIQ 141
+ S K G+ + +
Sbjct: 385 RAQQDYKKVSEAYHKSGLIYE-LRDRILAD 413
>gi|313228887|emb|CBY18039.1| unnamed protein product [Oikopleura dioica]
Length = 709
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 10/140 (7%)
Query: 176 REYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQ 235
+Y + ++ +I + + +R K+ + ++ ++ V
Sbjct: 92 TQYKLIEIMNTIQNEYAARPLELVRRRKEVLANEKQVVTRYHEN-------SSVETRGPL 144
Query: 236 YLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSA---QN 292
+ + + Q+L +Q + Q EY I + L + ++ Q
Sbjct: 145 QMEDETIRATLQDLYSCTQKTEESLREAQAAQEYFVIRYQEQLRYDHEVRRLSQEPEHQE 204
Query: 293 TPTKIEKHEAEYVKKLRSNA 312
+ + +Y K+L++ A
Sbjct: 205 RCRQYMAEKEKYDKELKARA 224
>gi|307706477|ref|ZP_07643286.1| foldase protein prsA [Streptococcus mitis SK321]
gi|307618187|gb|EFN97345.1| foldase protein prsA [Streptococcus mitis SK321]
Length = 312
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------SN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D VN + + G E++ L + G+
Sbjct: 51 PSAQQVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLA 139
K +
Sbjct: 108 RKAQIR 113
>gi|288800857|ref|ZP_06406314.1| putative PPIC-type PPIASE domain protein [Prevotella sp. oral taxon
299 str. F0039]
gi|288332318|gb|EFC70799.1| putative PPIC-type PPIASE domain protein [Prevotella sp. oral taxon
299 str. F0039]
Length = 461
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 50/139 (35%), Gaps = 10/139 (7%)
Query: 149 KNDFMLKYGNLEMEIPANKQKMKNITVREY-------LIRTVLFSIPDNKLQNQGFVQKR 201
+ + +I + + N E ++ + + + K
Sbjct: 81 SASILKNDVVVSADIEQQARNIYNKIASEVSSKGGLVKLQDIHIYLSQRASKADEKNAKD 140
Query: 202 IKDAEESRLRLPKDCNKLEKFAS--KIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
+A ++++ +D KL + + ++ + G+ +L + +F+N+ S +
Sbjct: 141 QIEAIYNKVKAGEDFGKLAQLYTQNTLYRATKGELPWLAKGQTLSEFENVAFALSPGEVS 200
Query: 259 NPYVTQKGVEYIAICDKRD 277
P+++ G + + K D
Sbjct: 201 KPFMSVDGYHLLYLQKKVD 219
>gi|239981770|ref|ZP_04704294.1| lipoprotein [Streptomyces albus J1074]
Length = 261
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 2/104 (1%)
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF-LDKQGIGDNHFKQYL 138
+I E + K+ +++GI+ + Q TG +AE L GI +L
Sbjct: 113 MISERVVKEAADEAGISPTRKELRERRAQLQEQTGGTAEQLEEAYLRTYGIPAARIDDHL 172
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
A Q + + + + + K+ ++ I
Sbjct: 173 AYQLRLDGL-RQKYAPGTSPEQADTQVRKELVRTAKGLGIDISP 215
>gi|239637527|ref|ZP_04678499.1| trigger factor [Staphylococcus warneri L37603]
gi|239596745|gb|EEQ79270.1| trigger factor [Staphylococcus warneri L37603]
Length = 433
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Query: 57 SKRIALLKLQKINGELEKIAVQELIVET-------LKKQEIEKS-GITFDSNTVNYFFVQ 108
+ + L +I+G+ E +++ + L I + I ++ +
Sbjct: 326 QQGLDLQTYFQISGQDESQLREQMKDDAEQRVKTNLTLTAIADAENIEVSDEDIDKELEK 385
Query: 109 HARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ +S ED + L I N +
Sbjct: 386 MSEQFNISVEDIKNTLGNTDIVKNDVR 412
>gi|255690565|ref|ZP_05414240.1| peptidyl-prolyl cis-trans isomerase [Bacteroides finegoldii DSM
17565]
gi|260624026|gb|EEX46897.1| peptidyl-prolyl cis-trans isomerase [Bacteroides finegoldii DSM
17565]
Length = 515
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 77/232 (33%), Gaps = 24/232 (10%)
Query: 94 GITFDSNTVNYFFVQHARNTG--LSAED----FSSFLDK----QGIGDNHFKQYLAIQSI 143
G + Y + + G LS ++ FS + K + I + + Q
Sbjct: 31 GREVSRSEFEYSYHHYRAGGGRDLSPKEYALLFSQAIQKVEAAKAIRLDTTAAFRKQQEE 90
Query: 144 WPDVVKNDFMLKYGNLEMEIPANKQKMK-NITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ D ++ ++ + + QKM + + + +P +K
Sbjct: 91 NRIKLMEDCLVDKQTVDSCVRVSYQKMALKARTGQVQVMQIFKYLPQTITSRHLEEEKAR 150
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTTNPY 261
D+ +R D + L++ + +F+N+ S+ + P+
Sbjct: 151 MDSIYQAIRNQPG-LDFSALVKCYSDDRQNRWIGGLQTTV--EFENIAFALSKGEISEPF 207
Query: 262 VTQKGVEYIAICDKR------DLGGEIALK---AYLSAQNTPTKIEKHEAEY 304
T G+ + + D++ D+ I + + Q IE+ + E+
Sbjct: 208 FTPAGIHILKVMDRKELPVYEDVVDGIVQRILHKEIRNQGIGKVIERLKREW 259
>gi|306833054|ref|ZP_07466185.1| peptidyl-prolyl cis-trans isomerase [Streptococcus bovis ATCC
700338]
gi|304424763|gb|EFM27898.1| peptidyl-prolyl cis-trans isomerase [Streptococcus bovis ATCC
700338]
Length = 352
Score = 35.8 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 84/302 (27%), Gaps = 43/302 (14%)
Query: 10 SDFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKIN 69
S K ++ + + ++ T+ G IT D K +
Sbjct: 15 SKAFKGVSIAVASALIGAGVTYLATNNNSETKALVTMKGNTITVSD------FYSAAKSS 68
Query: 70 GELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGI 129
++ + LI+ + + + G V + + A + G S SS L G+
Sbjct: 69 KSSQQTMLN-LILSRVFED---QYGSKVSDKEVTEAYNKTASSYGSSF---SSALQAAGL 121
Query: 130 GDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREY--LIRTVLFSI 187
+ +KQ + +++Y E K ++Y + ++
Sbjct: 122 TTDTYKQQIRTSM----------LVEYAVKEAAKDKLTTKNYKEAYKDYTPDTTATVVAL 171
Query: 188 PDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ 247
+ N Q A+ ++ K ++ D + L +
Sbjct: 172 SNEDKANSVHDQATADGADFDKIAKENTTAKKTEYTFDSAD-----------TKLPTDVR 220
Query: 248 N-LLKKSQNNTTNPYVT------QKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKH 300
+ K+++ + ++ + K D + + K +
Sbjct: 221 DAAFKQNEGSVSDVIKVMNSSTYSYTYYIVKTTKKTDKNSDWKTYKKRLKKAIMAKYQND 280
Query: 301 EA 302
Sbjct: 281 TN 282
>gi|187931475|ref|YP_001891459.1| hypothetical protein FTM_0703 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712384|gb|ACD30681.1| conserved hypothetical protein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 477
Score = 35.8 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 43/133 (32%), Gaps = 13/133 (9%)
Query: 5 VFTSLSDFIKLLTTYFVLIIFCIVPIVS-----YKSWAMSSRIRTTINGEVITDGDISKR 59
+ S +D +K T+ V+I + ++S + + S + I+ +
Sbjct: 1 MLQSFNDRLKGPFTWIVVISISFIFVISGMTFFFTNIGSSRAYVAKVGDNEISSQQFQQY 60
Query: 60 IALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ----HARNTGL 115
E ++ + ++I + L + ++ I + ++
Sbjct: 61 AQ----SATTEEQKRAILSQMIDQYLILADAQRHDIVVSKLALQSAIFTNPMFFDKDGKF 116
Query: 116 SAEDFSSFLDKQG 128
SAE + G
Sbjct: 117 SAEKLKQVVAYLG 129
>gi|167855404|ref|ZP_02478170.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis 29755]
gi|167853470|gb|EDS24718.1| peptidyl-prolyl cis-trans isomerase D [Haemophilus parasuis 29755]
Length = 624
Score = 35.8 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 17/178 (9%), Positives = 50/178 (28%), Gaps = 21/178 (11%)
Query: 15 LLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRI-------------- 60
+ F L+ V + +NGE I+ + R
Sbjct: 13 VFKIIFALVSLSFVLGGIGGGLMATDNSVAKVNGEEISQ-QVFSRAKNQQQNILNAQLGE 71
Query: 61 ALLKLQKINGELEK---IAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQ---HARNTG 114
L +++ + L+ + L +Q + I ++ + V ++
Sbjct: 72 RFWDLMDNPIYVKQFHESILNGLVDDELLRQYAKSLKIDVSADQIKSEIVNSPAFQQDGK 131
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKN 172
+ + L G+ + + + ++ + + + + K ++
Sbjct: 132 FNNNLYQQALRNNGLTADGYAAIVYEGMLFAQIQEAIVNSSFTVPAQQELLAKLLLQK 189
>gi|99078347|ref|YP_611605.1| histidine kinase [Ruegeria sp. TM1040]
gi|99035485|gb|ABF62343.1| histidine kinase [Ruegeria sp. TM1040]
Length = 887
Score = 35.8 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 71/200 (35%), Gaps = 19/200 (9%)
Query: 116 SAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITV 175
+ F+ L + +L +V + G L + +Q+
Sbjct: 469 QLDQFTQSLGQN----ETL--FLRDGK--TLLVSAHRTEQQGFLLTFVDVTEQRRAEAEQ 520
Query: 176 RE--YLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGK 233
RE L+R ++ + P N L ++ K I SR R + L F + +
Sbjct: 521 READLLLRKIVDACPANFLVSRVDDGKIIYCPPPSRERFGNITSTLSFFLNAEDRQT--Y 578
Query: 234 AQYLLESDLHPQFQNLLKKSQN----NTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
LL + ++ +++ T VT+ E + + RD+ +A++ L
Sbjct: 579 LDALLPTGALDDYRVQFRRADGSIMQGITAARVTEYKGEQVIVSSTRDISDLLAMQEELQ 638
Query: 290 AQ-NTPTKIEKHEAEYVKKL 308
Q + + EK A + +L
Sbjct: 639 QQRDAAHQAEKLSA--LGEL 656
>gi|294507824|ref|YP_003571882.1| PPIC-type PPIASE domain protein [Salinibacter ruber M8]
gi|294344152|emb|CBH24930.1| PPIC-type PPIASE domain protein [Salinibacter ruber M8]
Length = 685
Score = 35.8 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 59/238 (24%), Gaps = 35/238 (14%)
Query: 96 TFDSNTVNYFFVQHARN----TGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWP------ 145
T ++ FV A S + FLD HF+ +
Sbjct: 67 TLTLAELDSAFVDAAGGPQAAADSSLRAYRDFLD----RYLHFRLKVRAARDAGLDTLPR 122
Query: 146 ------DVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
D + + E+ P + + + + +L +
Sbjct: 123 IRREVHDYRQERARPQLLRTEVYAPLA-RTLYERRTQAVDVSHILIRP---TSSSDTLAA 178
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLK-------- 251
R A + L S + + Q ++++
Sbjct: 179 YREAQAIADSVGRGVPFGDLALRNSDAPAARTEGRRGYRGRLGYLQAGDIVEPFEDRMYA 238
Query: 252 KSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
T++ + T+ G + + D+R + L L P + LR
Sbjct: 239 VPPGGTSDIFRTKFGYHILKVHDRRPAAQPVELAHILR---RPQGDSATSRRLLDSLR 293
>gi|254785700|ref|YP_003073129.1| nitrogen fixation protein NifM [Teredinibacter turnerae T7901]
gi|237686104|gb|ACR13368.1| nitrogen fixation protein NifM [Teredinibacter turnerae T7901]
Length = 293
Score = 35.8 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 86/244 (35%), Gaps = 10/244 (4%)
Query: 71 ELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIG 130
+ +IA +++ +E + ++ SN ++ Q ++ ++ + G+
Sbjct: 33 DALRIAQRKIRIEEAVLSSSAAAKVSVPSNQIDEALDQIRGRYEEESDFYTDI-QRVGVD 91
Query: 131 DNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPAN--KQKMKNITVREYLIRTVLFSIP 188
+ F Q L+ + ++ G E EI K R +L +I
Sbjct: 92 ETFFYQALSRELHVEAILDFISSDCDGVTETEISLYYYMNVAKFQMPEVRTARHILVTIN 151
Query: 189 DNKLQNQGF--VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQF 246
++ ++N ++K + + + + K + + G + L+P+
Sbjct: 152 EDNVENSRANSLKKINQIVSRLDKKPDRFAEQALKHSECPTSLQGGLMGKVKRGVLYPEI 211
Query: 247 -QNLLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAY---LSAQNTPTKIEKHEA 302
Q L + + G + +C++ G + L+ L K ++ +
Sbjct: 212 EQALFALKVGELSEVVESPLGFHIV-LCEEIQQEGTLPLQDVYPRLEEFLLNRKRKQRQR 270
Query: 303 EYVK 306
++++
Sbjct: 271 QWLE 274
>gi|255079356|ref|XP_002503258.1| peptidyl-prolyl cis-trans isomerase [Micromonas sp. RCC299]
gi|226518524|gb|ACO64516.1| peptidyl-prolyl cis-trans isomerase [Micromonas sp. RCC299]
Length = 216
Score = 35.8 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 28/104 (26%), Gaps = 6/104 (5%)
Query: 173 ITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIG 232
+ E +L P +Q +D E R + ++ G
Sbjct: 112 VGGEEATASHILVKDPSLAQSLLERLQDGPQDNLEDRF-----AREAGNYSECPSKSKGG 166
Query: 233 KAQYLLESDLHPQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDK 275
+ +F + + P TQ G I + D+
Sbjct: 167 SLGTFKPGQMVKEFNDAVFNGPVGVIQGPVKTQFGYHLILVTDR 210
>gi|223044103|ref|ZP_03614142.1| trigger factor [Staphylococcus capitis SK14]
gi|222442497|gb|EEE48603.1| trigger factor [Staphylococcus capitis SK14]
Length = 433
Score = 35.8 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 14/106 (13%)
Query: 44 TTIN---GEVITDGDISKRIALLKLQ---KINGELEKIAVQELIVET-------LKKQEI 90
+N +I + + L LQ +I+G+ E +++ + L I
Sbjct: 307 AMVNTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEDQLREQMKDDAEQRVKTNLTLTAI 366
Query: 91 EKS-GITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFK 135
+ + ++ + + +S ED S L I N +
Sbjct: 367 ADAENVEVSDEDIDKELEKMSEQFNISVEDIKSTLGNTDIVKNDVR 412
>gi|193084249|gb|ACF09911.1| peptidyl-prolyl cis-trans isomerase ppiD [uncultured marine group
III euryarchaeote KM3-28-E8]
Length = 631
Score = 35.8 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 145 PDVVKNDFM-LKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIK 203
P+ ++ L ++E +I + ++ + Y F +P+ + VQ+ I
Sbjct: 227 PEYRSATYVHLTGKDVESDIDVSDADIQKL----YDQNIDAFKVPERRT-----VQQMIF 277
Query: 204 DAEESRLRLPKDCNKLEKFASKIHDVSIGK------AQYLLESDLHPQFQN-LLKKSQNN 256
EE + + FA+ D+ + + L + S
Sbjct: 278 STEEEAKTGAAHLAEGKTFAAVAKDLLRQDEDATNILGDVTKIHLPDTLAEAVFNLSDGQ 337
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKL 308
T P G + + + + + +++ E + KL
Sbjct: 338 VTPPLEGPFGWYVMRVTAIK--APKTQQLLEVRIDIRAQLVQERSGEALYKL 387
>gi|331703452|ref|YP_004400139.1| Trigger factor [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802007|emb|CBW54161.1| Trigger factor [Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 428
Score = 35.8 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 36 WAMSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQE--IEK 92
A + +N IT + + +++ L++ + V+ +I E +K E I K
Sbjct: 250 PAKDDELVKDLNLPDITTYEQLEQKVKEDVLEQKTKINKSEFVESIIDEIIKNSEFQIPK 309
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ I V F ++ + +
Sbjct: 310 TIIERQIKDVKKEFEDQLAQQKITLDKYKEI 340
>gi|294667019|ref|ZP_06732247.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603236|gb|EFF46659.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 294
Score = 35.8 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 58/215 (26%), Gaps = 14/215 (6%)
Query: 104 YFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEI 163
F + A L + L + +Q A +I V+ +I
Sbjct: 72 EFVREFADRLLLVEQARREHLQDDPVVAARIRQ--ATDAILAKAVQTRARESAQIDAAQI 129
Query: 164 PANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR------LPKDCN 217
A + +L + P + + A RL+ P
Sbjct: 130 KAQFDAHPHDYDEVHLSHLFVALKPQGAARRGTPLTDAQALARAQRLKQQLESGTPFAEL 189
Query: 218 KLEKFASKIHDVSIGKAQYLLESDLHPQF-QNLLKKSQNNTTNPYVTQKGVEYIAICDKR 276
+ + G+ + ++ F + + + P +G I + +R
Sbjct: 190 AMRQSDDASTAAEGGELSPMFLRNVADAFVAPVQDLAVGQVSAPVRGAEGYHLIRVDARR 249
Query: 277 DLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ A Q ++ A +++LR
Sbjct: 250 PATLDSA-----RGQIEVQLRDQAAANALEQLRQA 279
>gi|188585727|ref|YP_001917272.1| trigger factor [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229558050|sp|B2A157|TIG_NATTJ RecName: Full=Trigger factor; Short=TF
gi|179350414|gb|ACB84684.1| trigger factor [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 446
Score = 35.8 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 69 NGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQG 128
G E + L++E +K +E GIT ++ + A A+ FL+ QG
Sbjct: 349 KGSAETRVKRNLVLEAIKDEE----GITATEEEIDEEINKIAEQAQQEADKIKEFLEMQG 404
Query: 129 IGDNHFKQYLAI 140
+ K +AI
Sbjct: 405 -RMSQLKNEIAI 415
>gi|291453630|ref|ZP_06593020.1| lipoprotein [Streptomyces albus J1074]
gi|291356579|gb|EFE83481.1| lipoprotein [Streptomyces albus J1074]
Length = 225
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 2/104 (1%)
Query: 80 LIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSF-LDKQGIGDNHFKQYL 138
+I E + K+ +++GI+ + Q TG +AE L GI +L
Sbjct: 77 MISERVVKEAADEAGISPTRKELRERRAQLQEQTGGTAEQLEEAYLRTYGIPAARIDDHL 136
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRT 182
A Q + + + + + K+ ++ I
Sbjct: 137 AYQLRLDGL-RQKYAPGTSPEQADTQVRKELVRTAKGLGIDISP 179
>gi|256384284|gb|ACU78854.1| trigger factor [Mycoplasma mycoides subsp. capri str. GM12]
gi|256385117|gb|ACU79686.1| trigger factor [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455287|gb|ADH21522.1| trigger factor [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 428
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 36 WAMSSRIRTTINGEVITDGD-ISKRIALLKLQKINGELEKIAVQELIVETLKKQE--IEK 92
A + +N IT + + +++ L++ + V+ +I E +K E I K
Sbjct: 250 PAKDDELVKDLNLPDITTYEQLEQKVKQDVLEQKTKISKSEFVESIIDEIIKNSEFQIPK 309
Query: 93 SGITFDSNTVNYFFVQHARNTGLSAEDFSSF 123
+ I V F ++ + +
Sbjct: 310 TIIERQIKDVKKEFEDQLAQQKITLDKYKEI 340
>gi|220912908|ref|YP_002488217.1| trigger factor [Arthrobacter chlorophenolicus A6]
gi|254788982|sp|B8HA36|TIG_ARTCA RecName: Full=Trigger factor; Short=TF
gi|219859786|gb|ACL40128.1| trigger factor [Arthrobacter chlorophenolicus A6]
Length = 464
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + E+I++ + EK + N + + V A G+ F+ +D+
Sbjct: 332 EVRANTARAFQNEIILDAI----AEKEEVDVSQNELIDYIVTTASQYGMDPNQFAQIIDQ 387
Query: 127 QG 128
G
Sbjct: 388 SG 389
>gi|194364618|ref|YP_002027228.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas
maltophilia R551-3]
gi|194347422|gb|ACF50545.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Stenotrophomonas
maltophilia R551-3]
Length = 651
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 231 IGKAQYLLESDLHPQFQN-LLKKSQNNTTNPYVTQKGVEYIAICDKRDLGGEIALKAYLS 289
G ++ + F++ L + P T G I + R GGE +
Sbjct: 337 GGDLGWVERGAMVKPFEDALFAAKAGDVIGPVKTDFGYHIIKVAAVR--GGEGKSFEEVR 394
Query: 290 AQNTPTKIEKHEAEYVKKL 308
+++ +L
Sbjct: 395 DTLAAEQLKADGERGFNEL 413
>gi|39995469|ref|NP_951420.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Geobacter sulfurreducens PCA]
gi|39982232|gb|AAR33693.1| PPIC-type PPIASE domain protein [Geobacter sulfurreducens PCA]
gi|307634691|gb|ADI83192.2| peptidylprolyl cis-trans isomerase, PpiC-type [Geobacter
sulfurreducens KN400]
Length = 297
Score = 35.8 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 54/176 (30%), Gaps = 10/176 (5%)
Query: 145 PDVVKNDFMLKYGNLEMEIPANKQKMKN--ITVREYLIRTVLFSIPDNKLQNQGFVQKRI 202
+ + + + E+ A Q+ + + ++R + D K
Sbjct: 106 REYLTKVVIAGVKVSDAELRAYYQEHAKDFVMPEQAIVRHIFIGFTDAADSQAKAAAKTK 165
Query: 203 KDAEESRLRLPKDCNKLEKFASKIHDVS--IGKAQYLLESDL--HPQFQNLLKKSQNNTT 258
+ RL+ +D + AS+ + + G + + + +
Sbjct: 166 TEGVLERLKKGEDFAAVAAEASEDIESAKEGGLLGAITPGQTNSEEFEKAVFALKAGEMS 225
Query: 259 NPYVTQKGVEYIAICDKRDLGG---EIALKAYLSAQNTPTKIEKHEAEYVKKLRSN 311
+ G + + ++++ + A L ++ +K E+V ++
Sbjct: 226 GLVESPFGYHIVKVDERKEKRALPFDEVKDA-LRSKLQGEAEQKKLREFVDEVAKQ 280
>gi|315185393|gb|EFU19165.1| trigger factor [Spirochaeta thermophila DSM 6578]
Length = 450
Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 16/80 (20%)
Query: 61 ALLKLQKINGELEKIAVQE------------LIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
AL K+ + +G+ + +E LI+ L IE+ I + + FF +
Sbjct: 335 ALDKVLEQDGKTREQIYEEWKPSATEALKKRLIITRL----IEERKIEVSDDELETFFKE 390
Query: 109 HARNTGLSAEDFSSFLDKQG 128
A G SA+ ++ + G
Sbjct: 391 VAEGAGASADQVKAYYAQMG 410
>gi|307718290|ref|YP_003873822.1| trigger factor [Spirochaeta thermophila DSM 6192]
gi|306532015|gb|ADN01549.1| trigger factor [Spirochaeta thermophila DSM 6192]
Length = 450
Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 16/80 (20%)
Query: 61 ALLKLQKINGELEKIAVQE------------LIVETLKKQEIEKSGITFDSNTVNYFFVQ 108
AL K+ + +G+ + +E LI+ L IE+ I + + FF +
Sbjct: 335 ALDKVLEQDGKTREQIYEEWKPSATEALKKRLIITRL----IEERKIEVSDDELETFFKE 390
Query: 109 HARNTGLSAEDFSSFLDKQG 128
A G SA+ ++ + G
Sbjct: 391 VAEGAGASADQVKAYYAQMG 410
>gi|138896219|ref|YP_001126672.1| trigger factor [Geobacillus thermodenitrificans NG80-2]
gi|134267732|gb|ABO67927.1| Trigger factor [Geobacillus thermodenitrificans NG80-2]
Length = 440
Score = 35.8 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Query: 67 KINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDK 126
++ + EK L +E + + I VN + A + LS + +
Sbjct: 360 QMKEDAEKRVRAALTLEAI----AKAENIDVTDEEVNEELEKMAASYNLSVDKLKELIGN 415
Query: 127 -QGIGDN 132
G+ ++
Sbjct: 416 LDGVKED 422
>gi|329957339|ref|ZP_08297859.1| hypothetical protein HMPREF9445_02737 [Bacteroides clarus YIT
12056]
gi|328523052|gb|EGF50155.1| hypothetical protein HMPREF9445_02737 [Bacteroides clarus YIT
12056]
Length = 510
Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 241 DLHPQFQNLL-KKSQNNTTNPYVTQKGVEYIAICDKRDLGG-EIALKAYLSAQNTPTKIE 298
+ +F++++ S + P+ T +G+ + + ++ ++ E + ++ + ++
Sbjct: 181 QMPVEFEDVVFGLSAGEMSQPFFTPQGIHIVKVLERLEMPSFESVKEELMARRAHRHGVD 240
Query: 299 KHEAEYVKKLRS 310
V+KL+
Sbjct: 241 SGAEAQVEKLKK 252
>gi|222151556|ref|YP_002560712.1| FKBP-type peptidyl-prolyl cis-trans isomerase homolog [Macrococcus
caseolyticus JCSC5402]
gi|254789008|sp|B9E748|TIG_MACCJ RecName: Full=Trigger factor; Short=TF
gi|222120681|dbj|BAH18016.1| FKBP-type peptidyl-prolyl cis-trans isomerase homolog [Macrococcus
caseolyticus JCSC5402]
Length = 427
Score = 35.8 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 17/108 (15%)
Query: 55 DISKRIALLKLQ-----KINGELEKIAVQELIVET-------LKKQEIEKS-GITFDSNT 101
+ +RIA L + +G+ E+ + + + L I K+ I
Sbjct: 319 EFEQRIAQQGLNLELYYQFSGQTEEQLKESMKADAEARVKTNLTLAAIAKAENIEISDTD 378
Query: 102 VNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVK 149
V+ + + GLS +D + L + K L IQ +VK
Sbjct: 379 VDAELSKMSEQFGLSVDDIKAALGNGEV----LKDDLRIQKAIDVLVK 422
>gi|325208828|gb|ADZ04280.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 288
Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 87/300 (29%), Gaps = 25/300 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I V +++ + + T+NG+ I I ++A + + E Q L+
Sbjct: 3 AKILTSVALLACSGSLFAQTL-ATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSLL 61
Query: 82 V----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
T+ QE+++ + + S +D Q
Sbjct: 62 ENEVVNTVVAQEVKRLKLDRS-AEFKNALAKLRAEAKKSGDDKKP-------SFKTVWQA 113
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
+ + E EI A + +E + +L +N +
Sbjct: 114 VKYGLN-GEAYALHIAKTQPVSEQEIKAAYDNISGFYKGTQEVQLGEILTDKEENA--KK 170
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ K ++ L+ ++ ++ + + V + E + P +Q + +
Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYQAIKDLKKG 226
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P + D R++ + + Q + V L A I
Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVK--VPSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284
>gi|308388554|gb|ADO30874.1| hypothetical protein NMBB_0386 [Neisseria meningitidis alpha710]
gi|325136920|gb|EGC59517.1| hypothetical protein NMBM0579_0318 [Neisseria meningitidis M0579]
Length = 288
Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 87/300 (29%), Gaps = 25/300 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I V +++ + + T+NG+ I I ++A + + E Q L+
Sbjct: 3 AKILTSVALLACSGSLFAQTL-ATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSLL 61
Query: 82 V----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
T+ QE+++ + + S +D Q
Sbjct: 62 ENEVVNTVVAQEVKRLKLDRS-AEFKNALAKLRAEAKKSGDDKKP-------SFKTVWQA 113
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
+ + E E+ A + +E + +L +N +
Sbjct: 114 VKYGLN-GEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENA--KK 170
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ K ++ L+ ++ ++ + + V + E + P ++ + +
Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYRAIKDLKKG 226
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P + D R++ + + Q + V L A I
Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVK--VPSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284
>gi|209884190|ref|YP_002288047.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
gi|209872386|gb|ACI92182.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
Length = 274
Score = 35.8 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 89/282 (31%), Gaps = 45/282 (15%)
Query: 43 RTTINGEVITDGDISKRIALLKLQKINGELE----KIAVQELIVETLKKQEIEKSGITFD 98
++NG VI I++ ++Q + + A + L+V L QE + GI +
Sbjct: 14 AISVNGVVIAREAIAQ-----EVQNHPADKPIHAWQAAARALVVRELLLQEAARLGIETE 68
Query: 99 SNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGN 158
D G ++ A ++ +V+ + +
Sbjct: 69 P-----------------------LCDPDG------RRETAEEAAMRALVEREVKTPEPD 99
Query: 159 LEMEIPANKQKMKNI-TVREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLRLPKDCN 217
+Q ++ T Y + +L + + + + + P
Sbjct: 100 EATCRRFYEQHLQRFRTGDLYEVAHILIAASRGDEAARLAARASAETILAAVKADPHVFA 159
Query: 218 KLEK--FASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQNNTTNPYVTQKGVEYIAICDK 275
+ A G+ + P+F+ +L++ Q T+ G + + D+
Sbjct: 160 DMASNHSACSTSAAEGGRLGQITRGQTVPEFEAVLERMQPGEIAIAETRYGFHVVRM-DR 218
Query: 276 RDLGGEIA---LKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
R G + K ++ + + A+Y+ L A I
Sbjct: 219 RAEGQTLPFELAKERIAGYLAASVEHRALAQYISILAGQAEI 260
>gi|315606045|ref|ZP_07881076.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312327|gb|EFU60413.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 201
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 8/109 (7%)
Query: 11 DFIKLLTTYFVLIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDIS---KRIALLKLQK 67
+ + L T +++ + + T +G T+ D++ +++ LL Q+
Sbjct: 2 RYTRQLATAALIVAAGLGLGACSAHPGAA---VVTSSGSYSTE-DVNEAVQQMGLLTGQQ 57
Query: 68 INGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLS 116
L+ E + G T V+ + + GLS
Sbjct: 58 SQ-ISADQIRTALLNEPILAAAASSVGTTISDEQVDQTVERVLQAQGLS 105
>gi|291536688|emb|CBL09800.1| trigger factor [Roseburia intestinalis M50/1]
gi|291537972|emb|CBL11083.1| trigger factor [Roseburia intestinalis XB6B4]
Length = 451
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 57 SKRIAL--LKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+ + L L K+ ++ A + + +Q + I ++ + A+ G
Sbjct: 331 EQYMQFSGLTLDKLEEQVRPEAETRIKSSLVLEQIAKDENIEVSEEEIDAEIEKMAKAYG 390
Query: 115 LSAEDFSSFLDKQ 127
+ A+ ++
Sbjct: 391 MEADKLKEYMGDA 403
>gi|220928515|ref|YP_002505424.1| hypothetical protein Ccel_1085 [Clostridium cellulolyticum H10]
gi|219998843|gb|ACL75444.1| hypothetical protein Ccel_1085 [Clostridium cellulolyticum H10]
Length = 209
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 26/176 (14%)
Query: 32 SYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVETLKKQEIE 91
S I TINGE IT + A++ + + K + ++ + +
Sbjct: 44 SQTLTKAGKDIVATINGENITKKGFNTYKAMINSENKLSD--KEILDRIVESHVVYTQAV 101
Query: 92 KSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQYLAI-----QSIWPD 146
K G + V + ++ + + FK+Y++ W
Sbjct: 102 KEGFRVSDHQVEAAIKSAREEISMDSKQYKA-----------FKEYISGLKMSEDEYWES 150
Query: 147 --------VVKNDFMLKYGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQN 194
+++ + ++ N E+ R + I K+Q+
Sbjct: 151 VKPTYKKALIRGAYKNALKQKFKKVKLEDPNEVNSKFSEFYDREIKDLISQAKIQS 206
>gi|298480173|ref|ZP_06998371.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D22]
gi|298273454|gb|EFI15017.1| peptidyl-prolyl cis-trans isomerase [Bacteroides sp. D22]
Length = 515
Score = 35.8 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 33/304 (10%), Positives = 92/304 (30%), Gaps = 53/304 (17%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
L++ CI + +A + +NG + +
Sbjct: 6 LLLGCI-SLFVVAVFAQEDPVLMRVNGREVLRSEF------------------------- 39
Query: 82 VETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH-FKQYLAI 140
E ++ E+S + + L E G+ F++
Sbjct: 40 -ENAYRRYAERSNAQLSPKE----YAALFVQSKLKVE----AARAAGLDTTTVFRKQ--H 88
Query: 141 QSIWPDVVKNDFMLK-YGNLEMEIPANKQKMKNITVREYLIRTVLFSIPDNKLQNQGFVQ 199
+ ++V++ + K + + K +K + R + + +P +
Sbjct: 89 EKRRTELVESYLIDKQVMDSCARVLYQKMGLKARSGRV-QVMQIFKRLPQTVTFRHLEEE 147
Query: 200 KRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNL-LKKSQNNTT 258
K D+ R+ + + D + LE+ +F+++ ++ +
Sbjct: 148 KVRMDS-IYRVIQNQPDLNFNRLVEIYSDDKQSRWIEGLETT--SEFEDVAFSLAKGAVS 204
Query: 259 NPYVTQKGVEYIAICDKRDLGG---------EIALKAYLSAQNTPTKIEKHEAEYVKKLR 309
P+ T +G+ + + D+ + E + + + T +++ + +
Sbjct: 205 QPFFTPEGIHILKVIDREEAFAYENVSGRLIERLRRKEILDKGTAAMLDRLKRSWQYTPN 264
Query: 310 SNAI 313
A+
Sbjct: 265 QAAM 268
>gi|296123565|ref|YP_003631343.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
limnophilus DSM 3776]
gi|296015905|gb|ADG69144.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Planctomyces
limnophilus DSM 3776]
Length = 415
Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 35/316 (11%), Positives = 100/316 (31%), Gaps = 54/316 (17%)
Query: 38 MSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELIVET--LKKQEIEKSGI 95
+++ +NG I ++ +R GE+ A ++L + L ++ I +
Sbjct: 97 FGAQVVARVNGAPIFASEVLERY---------GEVLAQAREKLPPDKFNLLRENIIAQNL 147
Query: 96 TFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDN----HFKQYLAIQSIWPDV---- 147
V + + + K+ L +Q+ P++
Sbjct: 148 R---AHVERQLIVERMRADMKPDQLKQLDGYLDAAFEKEMVKLKEQLKVQTK-PELEYEL 203
Query: 148 ---------VKNDFMLKYGNLEMEIPANKQKMKNITVRE----YLIRTVLFSIPDNKLQN 194
V+ F + K + I ++ Y F +
Sbjct: 204 NKRGTCLEDVRQSFQNN-RIAMEYLAVKAGKPEPINRKDLVEYYESHPEEFRLESRVKWK 262
Query: 195 QGFVQKRIKDAEESRLRLPKDCNK----------LEKFASKIHDVSIGKAQYLLESDLH- 243
Q D E++R+++ + K++ + G + + L
Sbjct: 263 QIQCSFLKSDQEQARVKMKSALEELANGESFEDVARKYSDGVTAKEGGHWDWTQKGSLSD 322
Query: 244 PQFQNLLKKSQ-NNTTNPYVTQKGVEYIAICDKRDLGGEIAL---KAYLSAQNTPTKIEK 299
+ + +L ++ ++ + + + + + ++R+ G + + + PT+
Sbjct: 323 KKLEEILFTAKVGELSDVTIIGRAYQVVFV-EERESAGMRPFAEVQQEIHKKIEPTRF-P 380
Query: 300 HEAEYVKKLRSNAIIH 315
+ + + + ++A+I
Sbjct: 381 NPRKILDAMLASAVIE 396
>gi|15676260|ref|NP_273394.1| putative cell-binding factor [Neisseria meningitidis MC58]
gi|121635519|ref|YP_975764.1| hypothetical protein NMC1825 [Neisseria meningitidis FAM18]
gi|161870724|ref|YP_001599897.1| cell-binding factor, putative [Neisseria meningitidis 053442]
gi|218768879|ref|YP_002343391.1| putative periplasmi hypothetical protein [Neisseria meningitidis
Z2491]
gi|254805619|ref|YP_003083840.1| Parvulin-like peptidyl-prolyl isomerase [Neisseria meningitidis
alpha14]
gi|304386526|ref|ZP_07368814.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|7225566|gb|AAF40788.1| putative cell-binding factor [Neisseria meningitidis MC58]
gi|120867225|emb|CAM10994.1| putative periplasmi hypothetical protein [Neisseria meningitidis
FAM18]
gi|121052887|emb|CAM09239.1| putative periplasmi hypothetical protein [Neisseria meningitidis
Z2491]
gi|161596277|gb|ABX73937.1| cell-binding factor, putative [Neisseria meningitidis 053442]
gi|254669161|emb|CBA07861.1| Parvulin-like peptidyl-prolyl isomerase [Neisseria meningitidis
alpha14]
gi|254670178|emb|CBA05266.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis alpha153]
gi|254671970|emb|CBA04400.1| putative peptidyl-prolyl cis-trans isomerase [Neisseria
meningitidis alpha275]
gi|261391870|emb|CAX49329.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
8013]
gi|304339355|gb|EFM05427.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|316984350|gb|EFV63324.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|319411180|emb|CBY91585.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
WUE 2594]
gi|325128931|gb|EGC51785.1| hypothetical protein NMXN1568_0307 [Neisseria meningitidis N1568]
gi|325130875|gb|EGC53605.1| hypothetical protein NMBOX9930304_0328 [Neisseria meningitidis
OX99.30304]
gi|325134926|gb|EGC57558.1| hypothetical protein NMBM13399_0343 [Neisseria meningitidis M13399]
gi|325138885|gb|EGC61435.1| hypothetical protein NMBES14902_0329 [Neisseria meningitidis
ES14902]
gi|325140994|gb|EGC63500.1| hypothetical protein NMBCU385_0305 [Neisseria meningitidis CU385]
gi|325143031|gb|EGC65383.1| hypothetical protein NMB9615945_0390 [Neisseria meningitidis
961-5945]
gi|325145140|gb|EGC67422.1| hypothetical protein NMBM01240013_0366 [Neisseria meningitidis
M01-240013]
gi|325198965|gb|ADY94421.1| conserved hypothetical protein [Neisseria meningitidis G2136]
gi|325199539|gb|ADY94994.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325202835|gb|ADY98289.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325203458|gb|ADY98911.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
gi|325205422|gb|ADZ00875.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 288
Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 87/300 (29%), Gaps = 25/300 (8%)
Query: 22 LIIFCIVPIVSYKSWAMSSRIRTTINGEVITDGDISKRIALLKLQKINGELEKIAVQELI 81
I V +++ + + T+NG+ I I ++A + + E Q L+
Sbjct: 3 AKILTSVALLACSGSLFAQTL-ATVNGQKIDSSVIDAQVAAFRAENSRAEDTPQLRQSLL 61
Query: 82 V----ETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNHFKQY 137
T+ QE+++ + + S +D Q
Sbjct: 62 ENEVVNTVVAQEVKRLKLDRS-AEFKNALAKLRAEAKKSGDDKKP-------SFKTVWQA 113
Query: 138 LAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNI--TVREYLIRTVLFSIPDNKLQNQ 195
+ + E E+ A + +E + +L +N +
Sbjct: 114 VKYGLN-GEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEILTDKEENA--KK 170
Query: 196 GFVQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQNLLKKSQN 255
+ K ++ L+ ++ ++ + + V + E + P +Q + +
Sbjct: 171 AVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDL----EQGVPPLYQAIKDLKKG 226
Query: 256 NTTN-PYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKIEKHEAEYVKKLRSNAII 314
T P + D R++ + + Q + V L A I
Sbjct: 227 EFTATPLKNGDFYGVYYVNDSREVK--VPSFDEMKGQIAGNLQAERIDRAVGALLGKANI 284
>gi|322376480|ref|ZP_08050973.1| foldase protein PrsA [Streptococcus sp. M334]
gi|321282287|gb|EFX59294.1| foldase protein PrsA [Streptococcus sp. M334]
Length = 312
Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------SN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D VN + + G E++ L + G+
Sbjct: 51 PSAQQVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLA 139
K +
Sbjct: 108 RKAQIR 113
>gi|307704713|ref|ZP_07641612.1| foldase protein prsA [Streptococcus mitis SK597]
gi|307621760|gb|EFO00798.1| foldase protein prsA [Streptococcus mitis SK597]
Length = 312
Score = 35.8 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 15/126 (11%)
Query: 16 LTTYFVLIIFCIVPIVSYKSWAMSSRIR--TTINGEVITDGDISKRIALLKLQKINGELE 73
+ + ++ + + + + S ++ G+VIT+ +++
Sbjct: 1 MKKKLLAGAITLLSVATLAACSKGSEGADLISMKGDVITEHQFYEQVK----------SN 50
Query: 74 KIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTGLSAEDFSSFLDKQGIGDNH 133
A Q L+ T++K ++ G D VN + + G E++ L + G+
Sbjct: 51 PSAQQVLLNLTIQKVFEKQYGSEVDDKEVNDTIAEEEKQYG---ENYQRVLSQAGMTLET 107
Query: 134 FKQYLA 139
K +
Sbjct: 108 RKAQIR 113
>gi|186684389|ref|YP_001867585.1| hypothetical protein Npun_R4267 [Nostoc punctiforme PCC 73102]
gi|186466841|gb|ACC82642.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length = 424
Score = 35.8 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 11/157 (7%)
Query: 55 DISKRIALLKLQKINGELEKIAVQELIVETLKKQEIEKSGITFDSNTVNYFFVQHARNTG 114
+I + A K + + ++ L+ E+L + E K + + +
Sbjct: 119 EIVQLQASYKNLQGQVSETQTSLGRLVQESLVQLEQRKQTLQISVEQLERRQERIRNEMR 178
Query: 115 LSAEDFSSFLDKQGIGDNHFKQYLAIQSIWPDVVKNDFMLKYGNLEMEIPANKQKMKNIT 174
+ S L I FK YL V L +E E PA K+
Sbjct: 179 TTFAGTSQDLA---IRVQGFKDYLTGSLQDLAVAAEQLQLTPSVVEREKPAVKEAKP--- 232
Query: 175 VREYLIRTVLFSIPDNKLQNQGFVQKRIKDAEESRLR 211
+ + Q Q ++ + ++ R +
Sbjct: 233 -----VEPQSGIPQFAQQQFQDTTKQIRRLIDQYRNK 264
>gi|271962961|ref|YP_003337157.1| protein translocase subunit SecA [Streptosporangium roseum DSM
43021]
gi|270506136|gb|ACZ84414.1| protein translocase subunit SecA [Streptosporangium roseum DSM
43021]
Length = 935
Score = 35.4 bits (80), Expect = 10.0, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 15/177 (8%)
Query: 139 AIQSIWPDVVKNDFMLKYGNLEMEIPANKQK-MKNITVREYLIRTVLFSIPDNKLQNQGF 197
++ I + N+ ++P K I ++ + F I N L+
Sbjct: 608 RVEMIMTRL----------NIPDDVPIESGIVSKAIASAQHQVEQQNFEIRKNVLKYDEV 657
Query: 198 VQKRIKDAEESRLRLPKDCNKLEKFASKIHDVSIGKAQYLLESDLHPQFQ-NLLKKSQNN 256
+ ++ K R R+ + + E+ S I+DV ++ + L K+
Sbjct: 658 MNRQRKVIYAERRRVLEGADLHEQIRSFINDVVDEYIAGATAEGFAEEWDLDKLWKAIGQ 717
Query: 257 TTNPYVTQKGVEYIAICDKRDLGGEIALKAYLSAQNTPTKI--EKHEAEYVKKLRSN 311
+T GV + +L E + + + E+ + +++L
Sbjct: 718 LYPTTLTIDGV-LEEAGGREELTAEFLNEKVKADAMAAYDLREEELGPDTMRELERR 773
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.309 0.136 0.338
Lambda K H
0.267 0.0420 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,011,120,521
Number of Sequences: 14124377
Number of extensions: 188945787
Number of successful extensions: 748881
Number of sequences better than 10.0: 4958
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 3758
Number of HSP's that attempted gapping in prelim test: 737848
Number of HSP's gapped (non-prelim): 8334
length of query: 317
length of database: 4,842,793,630
effective HSP length: 139
effective length of query: 178
effective length of database: 2,879,505,227
effective search space: 512551930406
effective search space used: 512551930406
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 81 (35.8 bits)